Lsi03G007240 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGATTTCTACCGTGCTCGCCAACATCGGTCAACATGATCCCATCCTCCACGTGACAAAGGATACGAAGGGAGATCATCAGTCTGAATGGATATCGATCCGTGCCATCGAAGATCCTTACGTGCAAGAAGTTGCAAAGTTTGCAGTGACAGAGTTTGACAAGGAAAAAATGGCAAAGTTTCAATACAAGCACTTGCTACGTTGTTGGATTAAGGAGGAGATGGGAGGCATAAAATATCGCCTTATTTTAGAGGTAATTAAAGAAGGAAAACTTGAGGGTAAATATGAGGCTATTGTATGGGAGGCTTCTGGCCGTCTGATTATAAGGAAGCTTAAGCTTATATCTTTCATGCCTTGTATTCATGGGGCTGATTGA ATGATTTCTACCGTGCTCGCCAACATCGGTCAACATGATCCCATCCTCCACGTGACAAAGGATACGAAGGGAGATCATCAGTCTGAATGGATATCGATCCGTGCCATCGAAGATCCTTACGTGCAAGAAGTTGCAAAGTTTGCAGTGACAGAGTTTGACAAGGAAAAAATGGCAAAGTTTCAATACAAGCACTTGCTACGTTGTTGGATTAAGGAGGAGATGGGAGGCATAAAATATCGCCTTATTTTAGAGGTAATTAAAGAAGGAAAACTTGAGGGTAAATATGAGGCTATTGTATGGGAGGCTTCTGGCCGTCTGATTATAAGGAAGCTTAAGCTTATATCTTTCATGCCTTGTATTCATGGGGCTGATTGA ATGATTTCTACCGTGCTCGCCAACATCGGTCAACATGATCCCATCCTCCACGTGACAAAGGATACGAAGGGAGATCATCAGTCTGAATGGATATCGATCCGTGCCATCGAAGATCCTTACGTGCAAGAAGTTGCAAAGTTTGCAGTGACAGAGTTTGACAAGGAAAAAATGGCAAAGTTTCAATACAAGCACTTGCTACGTTGTTGGATTAAGGAGGAGATGGGAGGCATAAAATATCGCCTTATTTTAGAGGTAATTAAAGAAGGAAAACTTGAGGGTAAATATGAGGCTATTGTATGGGAGGCTTCTGGCCGTCTGATTATAAGGAAGCTTAAGCTTATATCTTTCATGCCTTGTATTCATGGGGCTGATTGA MISTVLANIGQHDPILHVTKDTKGDHQSEWISIRAIEDPYVQEVAKFAVTEFDKEKMAKFQYKHLLRCWIKEEMGGIKYRLILEVIKEGKLEGKYEAIVWEASGRLIIRKLKLISFMPCIHGAD Homology
BLAST of Lsi03G007240 vs. ExPASy Swiss-Prot
Match: Q10Q47 (Putative cysteine proteinase inhibitor 7 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0210100 PE=3 SV=1) HSP 1 Score: 53.1 bits (126), Expect = 2.5e-06 Identity = 32/83 (38.55%), Postives = 46/83 (55.42%), Query Frame = 0
BLAST of Lsi03G007240 vs. ExPASy Swiss-Prot
Match: Q6TPK4 (Cysteine proteinase inhibitor 1 OS=Actinidia deliciosa OX=3627 PE=1 SV=1) HSP 1 Score: 52.4 bits (124), Expect = 4.3e-06 Identity = 26/72 (36.11%), Postives = 46/72 (63.89%), Query Frame = 0
BLAST of Lsi03G007240 vs. ExPASy Swiss-Prot
Match: P86472 (Cysteine proteinase inhibitor 1 OS=Actinidia chinensis var. chinensis OX=1590841 GN=CYT1 PE=1 SV=2) HSP 1 Score: 51.2 bits (121), Expect = 9.7e-06 Identity = 26/72 (36.11%), Postives = 45/72 (62.50%), Query Frame = 0
BLAST of Lsi03G007240 vs. ExPASy TrEMBL
Match: A0A5A7SN35 (Cystatin domain containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G001920 PE=4 SV=1) HSP 1 Score: 228.0 bits (580), Expect = 2.1e-56 Identity = 113/123 (91.87%), Postives = 117/123 (95.12%), Query Frame = 0
BLAST of Lsi03G007240 vs. ExPASy TrEMBL
Match: A0A0A0K644 (Cystatin domain containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G066240 PE=4 SV=1) HSP 1 Score: 226.5 bits (576), Expect = 6.2e-56 Identity = 110/124 (88.71%), Postives = 118/124 (95.16%), Query Frame = 0
BLAST of Lsi03G007240 vs. ExPASy TrEMBL
Match: A0A6J1IC35 (cysteine proteinase inhibitor 5-like OS=Cucurbita maxima OX=3661 GN=LOC111471628 PE=4 SV=1) HSP 1 Score: 67.4 bits (163), Expect = 4.8e-08 Identity = 35/105 (33.33%), Postives = 64/105 (60.95%), Query Frame = 0
BLAST of Lsi03G007240 vs. ExPASy TrEMBL
Match: A0A6J1EKC1 (cysteine proteinase inhibitor 5-like OS=Cucurbita moschata OX=3662 GN=LOC111434113 PE=4 SV=1) HSP 1 Score: 67.0 bits (162), Expect = 6.3e-08 Identity = 34/105 (32.38%), Postives = 64/105 (60.95%), Query Frame = 0
BLAST of Lsi03G007240 vs. ExPASy TrEMBL
Match: A0A2P2NS36 (Cysteine proteinase inhibitor OS=Rhizophora mucronata OX=61149 PE=4 SV=1) HSP 1 Score: 64.3 bits (155), Expect = 4.1e-07 Identity = 36/89 (40.45%), Postives = 54/89 (60.67%), Query Frame = 0
BLAST of Lsi03G007240 vs. NCBI nr
Match: KAA0031436.1 (Cystatin domain containing protein [Cucumis melo var. makuwa] >TYK06887.1 Cystatin domain containing protein [Cucumis melo var. makuwa]) HSP 1 Score: 228.0 bits (580), Expect = 4.4e-56 Identity = 113/123 (91.87%), Postives = 117/123 (95.12%), Query Frame = 0
BLAST of Lsi03G007240 vs. NCBI nr
Match: KGN43767.1 (hypothetical protein Csa_017208 [Cucumis sativus]) HSP 1 Score: 226.5 bits (576), Expect = 1.3e-55 Identity = 110/124 (88.71%), Postives = 118/124 (95.16%), Query Frame = 0
BLAST of Lsi03G007240 vs. NCBI nr
Match: KAG6571859.1 (hypothetical protein SDJN03_28587, partial [Cucurbita argyrosperma subsp. sororia] >KAG7011544.1 hypothetical protein SDJN02_26450, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 201.4 bits (511), Expect = 4.4e-48 Identity = 99/120 (82.50%), Postives = 105/120 (87.50%), Query Frame = 0
BLAST of Lsi03G007240 vs. NCBI nr
Match: KAG6588760.1 (hypothetical protein SDJN03_17325, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 193.7 bits (491), Expect = 9.2e-46 Identity = 94/121 (77.69%), Postives = 105/121 (86.78%), Query Frame = 0
BLAST of Lsi03G007240 vs. NCBI nr
Match: XP_022973098.1 (cysteine proteinase inhibitor 5-like [Cucurbita maxima] >KAG6583727.1 Cysteine proteinase inhibitor 5, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 67.4 bits (163), Expect = 9.9e-08 Identity = 35/105 (33.33%), Postives = 64/105 (60.95%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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