Lsi03G005300 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi03G005300
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Descriptionprotein TIC 21, chloroplastic
Locationchr03: 6246369 .. 6254860 (+)
RNA-Seq ExpressionLsi03G005300
SyntenyLsi03G005300
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AGAACATCCCCAAAACCCATCAAAACGCTAACTACTATAACATCCACTGTAGGCTCTCTGCCTGCAGCGCTATCAAAATTGTATTTGATCGTCAATCATGCAGTCGCTACTCTCGCCGGTAGCTCGCAGCGGTCCCTTCCCTGCCGCTGCCGCACTTTATACCTCGGATTTACACCTCAACCGCTTCCATCGCCGGCCCTTCTCTGTCCGCCACTCGTCCAATCTCAATTCTCCTCCCAATTCCCTCCCTTCATTTAGTGCCATTCGACCTTCTTCTTCTTCGTTGTTGCTTTTAAAGGCTTTTAGTACTCTGGAGCATCGAAGAGGACAGTTTTGCTCGGAAATACGCGCTTCTTCTAGTCCCATTTCGCCGACAGTTTCCCCTAATGATGAGGCTGAAAAGGCAAAACTGGCTCAGGTTCTCTTTCTTCGAATGCTTTCAGTTCTTTTTTTATTTAACCCTTTTTGATGTGATGTTTAATTGACCTGGAAATGTAGTATTGAAAATTAGGCTGACCTTGCTTTAATTTCGTTGGGTGAAATTGTGAAAGAATTTTGTGTCCGTTTAATCATAGATGAACCTTTGTGTTTACTAGTTTCATAAACTTTTCTTCTCTAATTTGATTGACTATGGATGGTTTCTTAAATTCCTACCCTATTTAGCTCTTTTCTCTCCCTTGTGTGGGTCTAGCCCTCCCATACGTCCTTGTTCTCCTTGCTGTGAAGCTTCGAATCTTCAAGAAGGTCAGACTTTTTGCCTGGCAGATCTACCATGGGAGCAGTAACACTATAGATTTGTATTAAATAATCGTCTTCTGCTATGCTTGGTCATTAGTGGTGTAGAGTATGCAAGAAGGTTGTGGAGAGTCTGGGCCATGTTTTTTGGGATTGTCGGTTTGCTACAATGATTTGGGATAGATTCCTGCAGTCTTTTGGTATTCAGATGGCTTGCAACAGGTCGTGTAGGGTTATGATGGAAGAGTGTTATTCCACCTCCTTGTCGTGAATGTGATAGAGGGGCAAGTTTTTGGTAGACTGTTTCTTTCCGTTCTTATGTGATATTTGGCTTGAGAGATATGAGTCTTTAATGATAAGGAAAGTCCTTGGGAGGGCTTTGGGCTTTGGTTAGCTTCAATACCTTCCTTTGGGCATCCGTCACTAAAGACTTGAGTTACCCTTTATCTGTCATTCTTTTGAAACTGGAGCTCCTTTTTGTAATTTTTCCCTGTATTTTCATTGTTCTTTTGGCTCTATCTAGATGGGGCTTTCCTATTTTGTGTTGCCTTTCTATATTCTTTCATTTGTTCTAAATGAAAGTCATTCTTTTCATATGAAAAAAAAAAAACAATCCTAATGTTGATGATAGATAAGTTACACGATGAACTTTATTAAGCAAGAATATTCAATAAGTTGTACCTTAAGTCTAAGTATTAACAAAATCATCAAGTTGAGAAACCTTGGAAACCACTCTCATAGGCCCCGTTTGATAACTATTTGGTTTTTGAAAATTGTGCTTGTTTTCTACCATTTTCTTATCATGGTTTTCATCTTTCCTAAGTAACCATTTGAAATTTTAGCCAAATTTCAAAAACAAAAACTACTTTTTTTAGTTTTCAAAACTTGGCGTAGATTTTAAAAATACTCTTAAATAGTAGACAATAAAACATAGAAATCAATAGGCGGAAGTAGTGTTTGTTAGCTTAATTTTCAAAAACTAAATGGTTATCAAATAAGGCCTTAATGTGCTGATTGCTAGCACATCCAAGGCTCTAGTGTCTAGTTTTGCTAGATAAGTATAGACGGATGATGTATCCAAGATTGCCTTTTGAACCCATGAAGGCTACTATACTACGAAAACTTGTGGCTGGCTATGGTAACGCTGAATGGTCCCGACTGAACAATTGAAGGGAGGGAGAAAAGTTTGGTTGGTACCCCTAAGTTGAAGCATAGACCACAATGTTCTTTTGTAGGCTCTCCCTGATTTCTAAAGCAATTGTGAAAGTCAACGCATTTGGTTATGGGGTGTGTGTGCTGCAAATAAAGAACCAAAGATCATAGCTTACTACTAACAGGTCCCTCCATGGTAAGCCAGATAGAAATCTATCCACGAGAAGAAATTCATGGCAATAATATTGTTACTTATAGAACTGGCGACCTACTTGCTTAGACAGAGGCTTGTTGCCCATATCGATCAAATAAGACTGAAGTATTTGATAGAACAAAGGCTAGTGAGTGTGAACCTCACAAGTGGTTGACTAAATTGTTGGGATTGTGATTTCTAAATTCAATACTGCCGTGAACTAGAGAATAAAGCAGTGGTGGTGCCCCTTCATGTTTAGCTTTAGAGGCAATTTTAACATCATTCTCTATCGTGAAAGGATCATAGGCATGTAAAAGGAAACTTCTACCTAGCCCAAGCACCAGTCAAGCGGTCCATTATGGAAGGTCAGCTCTCTCCCTCACACCTTATTATGGAGTCAGATCAATTATGGTTTAAAGGGCATTTGTATTTTGTTGTTCCCAAGGATCCCTTCTCGTTTGTTTCCTCCAAAAGTACTGTTGTAGTGTGATTGAGGAACATTCGGGTGTGTTGATGAAAATCTCCAAAAGTACTATTTTCTGTGGCTGCAACTTATCTGGCCGTTGTCATGGGATAATTTTACTATGGACTTCATCGAGAATTGCCAAGTATGAGGGAATGGACTTAGTATGGAAATTATATTTTCTTCTTCTTTTTCTTTTTCTTTTTTTTTAATTTTTTTTAATTATTATTATTTATATAACTGCAACAACATGTCATGGGGGATCCAGCTGAGATTATATGAAATTGGCATTTATCGAGGAAAGTATCATGCTCTGTGGTAGACCTCAAGTGGCTTCATAAGCAACTTTTGGAATAAAATATTCAAAGTACAGGATATTGTTTTAGAGCACTATGCCATCTTCAAATTGATTAGTAATCAGAGGAAGATAATTAGGGACTGGAAACAAGGTGCTTTACAAAAACCAAGACAGGGGCCACTGTCATGGGCTCAGTATTAGTTCAATATCTTGTAGGCTTGTACTATATTACCTTGAAGGCTAGCTCTTATCAACTTCTGCTTGGTTAAGGTTGTCTCTTTTCAACTTCTATAAAGGTTGCCTCTTCTTGATAAGAATGGAAATGATGAAGGAAGAATAAGGTTAATTAGGCAATATTCTAGGTTAATTCCCTTTTACCCCCACTAATAATAAACTCTATAAATATGAGTCTTCCCCCTCTTATATGGGACACATTATCATTCTAATAAAAGATTCACAAGCTTGATTCTTGGATGATTACTTCTTGAGGCTACTTAGGTTACATCAGGAAAGTTGTCTATGCTTTTAACATATTCTAGGGCAAATTAGCTTTAGTCTAAGTAGTGAAAGTGGAGTGATTTTGTACAGAAGAGAAATTACTTTTGTTATTTTTTTTTCCTTGAGAGGAAAACAATATCATTGATGAATGAAATGGGGAGAAATAACTCTCAAAAACTTCAAGAGGTGTATTGCAATAAAGCTTTCCAATTGGAAATTAAAGTAGTAAGATTGTAATCATAAAAAAGGCATTACTATTGCACCAATATAGAGCATGAAATACAATTAAATCCAAAAAACTATCAAAAAATTGAGGAAGAGTCCCTGGAAATTCTCCCATTTTGTTCACACCTAAGGGTCCAGAAAACAATCTGTTGAAAGCCAACCACAATGTTTTCTTCACACCATGGAAAGGATGGCCCACAAAGATGGAAGCAAGAACATCATATATGTTACCAGGCATAGACAATGACCACCAAAAAGCATCCAACATTATGGACCAATAACGAAAAAGGCGCATCACACACCATGAAGCAGTGGGCAAAAAAGATGGCACAGATTTTCATCACTAGAAAGGCACATCACACACCATGAAGGCAAGAGGCAAATATAAGGCATTCTCCTTTGAAGGCGATCAACGATGTTGACACTCTCCTGACGAAGTTCCCATTAGAAAGATATTAAATTTTTTGGATAAGCGTCCTCTCAAATCACCGAATAAAGGTTGTGAGGAGATGAATTCTTTTGCATGTGTTAAATCCTCCATCAATGATTGCACTGTAGAGGCCAAAACCACGAATCATCAGACTTCCTTGGATTAACTAAGGAGAGAAAATGAGAGAGACTATAGCCCATTCAACAACTTCATTCTCATTAAGGTTTCAACGAAGACCCAAATTCCAAGCATGATGTTGGGCATTCCAGACTTGTTCAACATAATCATTTGACCTAGTAGATAGTTGAAACAATCTTAGATAGGCTGTAGCAAGAATTCGACAACTCAGCCAATAATCATGCCAAAAGGATGCATGAAGACCATTGCTGACAGTCCTTTGAATACGAAACCAGAGATTGTTTGAAGACAAGGGTGTTAACTGGGTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAATTTAGTCCCTACTTTGAAATTCATAACAATTTAATCCTATCATGAAAAATCTCTTCAAGATTAAGTGTCAACTTTTATCATGTAGTGACTTGGTTTTTATAGTTTATTTAAAATAAAAATAAAAAAAATAAAAAAAGGGGGGGGGGGGGGGGGGGGGGGAGAATAGTAAATGTGAGCTCACAGTTTATAGTAGACAGGAAGAGCAGTACTCAGGTAGCTTAGGTAGTGTGCATAAGTAGTTACGTCCAAAAAAAAAGGAAAAAGAAAAAGCAACTAAACCTCAACAAATAGAAGTACATTCTGGAAATATTATAAACAGTTAAGAGAGGACACAAATAGTAAGTATCACTGTAGAATATCAGCACAGTTTGAATCAAATTCCTTCGTCACATATGTGTATATTATGAAACTGTTTCATCACATTTCTGAAACTGCTCACTGCATAACCTCTTTAGTATTGCAAATGGACAGGTTATTTAGGTCTTTAAAATGCTTCTTTATGATCAATGTAGACTGGAAGAGACTAAATTGGACCACGCAGTTTTAAATTTGTTTAATCTTCAATCTTTGTTCTTTGCAACTCTTACAAACCATCTGATCGTGTCATCTAGGCCAATATTGTATCTTCCATGTTGCTTAGTTAGTTTACCTTGCTTCTGACTGTTACCTTGCTGATACTGTTAGTTGCTTGTTTAGTGGCGTAGTTAGTTTGTGGTTTGTTAAGTAGTTTACTGTGTAACTGTTGGTTAGTTGGGAGCATATCTAGTTAACTGCTATGCCTTTTTAGTCACTTCTTTTGAATTGAATAATGATCTTATGATTTCTTTCAAGAGGTTCCTAGACTACTGCATCACTGTCATTATGGCTAATCATTTAATGAACTAAGTTGCTTTGATGGTTTAGGTGGCAAAGAGATTAGAAAAGACATCGAAATATTTCAAGAGGTTAGGTAGTCTCGGATTTTGGGGACAGTTGGTGTGCACAATTGTCGCTGCCGTTATTCTTTCGTTCTCTGTTGTCATCACCGGGAAAATTACATCACCTGCCACTTTTTATGCTACTGCTGGTGGTATTGTGGCAGCTTTCATTTCCGTATTTTGGTCCTTTGGTTACATTCGGCTTTCTGATAAGCTTCAACGGACTGCAAATCAACCCTCCAAGGTATTTTGATTGCAGAGTCTCTCTGTGTTAACTGATTTCTCGTGATTACTGTTAAGGCCTTAGTGTGCAAGAAGCCATTTATTTGTTCCCTCAGTCTTCTAAACTGGAAACCCATGTTCATTCATCCAATTTAATTTGCTTATAAACAGGATTTATTTGCTATAAAAAAGAGATCTTATTATTTGTTATGTCATTTATCTATTTGAAAAAGAGCAATGATTAAGCTGCACCTAATCCCATGCTCCCTTTCTTTCCTTTCTTTTACACACACAAAAAAGAATTTAATCATTAAAAAAAAACAGATTGCCACATGACAATTTTTTTATTGGGTGCAACCTTTTTTCTCCTTAAAAAATGAAACAAGATAACTTGTACATTACAACTTGGATTATTTCGTCTTTACTCCAGCAAAGATTTCAAAAGGCTTCATCAGCTTTCTTACCATTCTTCTATCCAAATATAAACATGACGAAGAATGATTGAGGATCCCACATTGGAAAAATCATGGAACCTCACAATCTTTATAAGATGGCATAGACTGCTCTTACCAATTGGTTTTGGGTTGGGACTTCATGTCATCTAATATGGTATTAGAGCTCATGAAGCCCAAACGGGCATTCAGTCCAAAAATAAAATGTAGAATCTGATCCAAGAAATGATAAATCCAAAGAGACAACATCTTGAGAGGACATGTTGAGGATCTCACATTAGAAAAATCAAAGGACCTTACAGTCTTTATAAGATGACATGACTTACTTCTCTCGTGTGTCAATTGGTTTTGAGATGGAACCCTATATTATCTAATATGAACTTTAGACTCTGTCATTAAAATTGGTGCCTTGCTGTGGATTTCTCGTAATGTTACCATTTTTTTTTACTTGAGAAATGCAACTTGGTCATACATCCAGCTTTCGGCATCCTTATTTCTTTCCTTCATTTATTTTTGCACTATTATTTTGTAACTGGAGTAGCTATTTTGACATAATCTTAACGGCTAAATATGAGCATATGTAAAATAAAGTAGCAATTTGACAGAACTCATGCTTCCTATTTTTTTTTTTTAATGATCCCTATTTCAGGCTCCTCCCCGAGCTGATGTTGTGAATAGCCTAAAAAATGGAATAGTGGTGAACCTACTGGGCATGGGTGCTGCCATTCTGGGGATGCAAGCGACGGTGGGATTGTTAGTTGCTAAGGCTCTTACTTCCTCAGCAATTCCATATTACCAGGGAGCCTCCCCTGGGAATAGCCCTGTTCTTGCTCTGGATGTATTCCTAGTACAGGTGCATTTTTTCCCCCTCAATTGTTCTTTTGCTGAAGAACATAAAAGATTTTCAGATTTTGGATTCAGTGGAACACCGTAAACTTAAGGTGAACAATTGGTTGAATTGGCATGCTTAAAAAGGTCTCGGCCTTTTACCAGTGGTATATAGTGATTTTAACAATGGGAACAGTGAATGTCATGTATGCTTTATTGATTGCTAGAGCAGATCGTTCTACTTCTCCTGTAACTAATGGCAGTCATGAGAGTATAAAGGAAGAACAAAAAGAGCCTTGTGCAGGAAAACTCACTCGAGCATACAATGAACCAAATTTGTATAAGGCATATCAAAATTTACATTGATTCTTGATGAGATAGCCTTGTGCCATTTAATGACTTCTTTTAACTTTCCTACTTGCAGGCTTCTGCAAACACTATTCTCTCTCATTTCCTGGGGCTCGTTTTCTCGTTGGAGCTACTGCGCTCGGTGACATTACCTGCTACGGAGGTTATTCCTATTCCCCGAATAGCATAACCTCCACCATCGCCCTTCCAGTCAGTTAATCCAGCAGCAGATTCAACATCCAAGGCAACACAATACGAATTGCTCACGAGTTTAGTGTCCATTTTCAAGCGTAATCAAAGGCATTTGTATTTTTGTCTCACCCATCTGATCGGGGTACTCTCTTTTCTGATGTTGGTGGAAATCAAAAGCCTCTCTTGATATGGGACTTGAATAGTTACAAAGGTCCTTGAAGGTGTTTTCTGAGGGTAGCTTAAATGGAAGTTTCTTGTATTTGTATTAGAAGAATGGCAAGCCATGTCAAACTCTTCTCTTAAAGTGTAGATTCAATGATGGTTCTATCTCGAGTTTTAAATCTCTCATCCATTTTAATATTTACTTTGTTTTTTTCTTCTTTTAATGGAAAACATTTACATGGTTGAAACTTTGGTAATGGTTGTTTTCTATATTTGGTTTATGAAATTTTAATTTTAATTTTTAAGCACTATTTGAT

mRNA sequence

AGAACATCCCCAAAACCCATCAAAACGCTAACTACTATAACATCCACTGTAGGCTCTCTGCCTGCAGCGCTATCAAAATTGTATTTGATCGTCAATCATGCAGTCGCTACTCTCGCCGGTAGCTCGCAGCGGTCCCTTCCCTGCCGCTGCCGCACTTTATACCTCGGATTTACACCTCAACCGCTTCCATCGCCGGCCCTTCTCTGTCCGCCACTCGTCCAATCTCAATTCTCCTCCCAATTCCCTCCCTTCATTTAGTGCCATTCGACCTTCTTCTTCTTCGTTGTTGCTTTTAAAGGCTTTTAGTACTCTGGAGCATCGAAGAGGACAGTTTTGCTCGGAAATACGCGCTTCTTCTAGTCCCATTTCGCCGACAGTTTCCCCTAATGATGAGGCTGAAAAGGCAAAACTGGCTCAGGTGGCAAAGAGATTAGAAAAGACATCGAAATATTTCAAGAGGTTAGGTAGTCTCGGATTTTGGGGACAGTTGGTGTGCACAATTGTCGCTGCCGTTATTCTTTCGTTCTCTGTTGTCATCACCGGGAAAATTACATCACCTGCCACTTTTTATGCTACTGCTGGTGGTATTGTGGCAGCTTTCATTTCCGTATTTTGGTCCTTTGGTTACATTCGGCTTTCTGATAAGCTTCAACGGACTGCAAATCAACCCTCCAAGGCTCCTCCCCGAGCTGATGTTGTGAATAGCCTAAAAAATGGAATAGTGGTGAACCTACTGGGCATGGGTGCTGCCATTCTGGGGATGCAAGCGACGGTGGGATTGTTAGTTGCTAAGGCTCTTACTTCCTCAGCAATTCCATATTACCAGGGAGCCTCCCCTGGGAATAGCCCTGTTCTTGCTCTGGATGTATTCCTAGTACAGGTCTCGGCCTTTTACCAGTGGTATATAGTGATTTTAACAATGGGAACAGTGAATGTCATGTATGCTTTATTGATTGCTAGAGCAGATCGTTCTACTTCTCCTGTAACTAATGGCAGTCATGAGAGCTTCTGCAAACACTATTCTCTCTCATTTCCTGGGGCTCGTTTTCTCGTTGGAGCTACTGCGCTCGGTGACATTACCTGCTACGGAGGTTATTCCTATTCCCCGAATAGCATAACCTCCACCATCGCCCTTCCAGTCAGTTAATCCAGCAGCAGATTCAACATCCAAGGCAACACAATACGAATTGCTCACGAGTTTAGTGTCCATTTTCAAGCGTAATCAAAGGCATTTGTATTTTTGTCTCACCCATCTGATCGGGGTACTCTCTTTTCTGATGTTGGTGGAAATCAAAAGCCTCTCTTGATATGGGACTTGAATAGTTACAAAGGTCCTTGAAGGTGTTTTCTGAGGGTAGCTTAAATGGAAGTTTCTTGTATTTGTATTAGAAGAATGGCAAGCCATGTCAAACTCTTCTCTTAAAGTGTAGATTCAATGATGGTTCTATCTCGAGTTTTAAATCTCTCATCCATTTTAATATTTACTTTGTTTTTTTCTTCTTTTAATGGAAAACATTTACATGGTTGAAACTTTGGTAATGGTTGTTTTCTATATTTGGTTTATGAAATTTTAATTTTAATTTTTAAGCACTATTTGAT

Coding sequence (CDS)

ATGCAGTCGCTACTCTCGCCGGTAGCTCGCAGCGGTCCCTTCCCTGCCGCTGCCGCACTTTATACCTCGGATTTACACCTCAACCGCTTCCATCGCCGGCCCTTCTCTGTCCGCCACTCGTCCAATCTCAATTCTCCTCCCAATTCCCTCCCTTCATTTAGTGCCATTCGACCTTCTTCTTCTTCGTTGTTGCTTTTAAAGGCTTTTAGTACTCTGGAGCATCGAAGAGGACAGTTTTGCTCGGAAATACGCGCTTCTTCTAGTCCCATTTCGCCGACAGTTTCCCCTAATGATGAGGCTGAAAAGGCAAAACTGGCTCAGGTGGCAAAGAGATTAGAAAAGACATCGAAATATTTCAAGAGGTTAGGTAGTCTCGGATTTTGGGGACAGTTGGTGTGCACAATTGTCGCTGCCGTTATTCTTTCGTTCTCTGTTGTCATCACCGGGAAAATTACATCACCTGCCACTTTTTATGCTACTGCTGGTGGTATTGTGGCAGCTTTCATTTCCGTATTTTGGTCCTTTGGTTACATTCGGCTTTCTGATAAGCTTCAACGGACTGCAAATCAACCCTCCAAGGCTCCTCCCCGAGCTGATGTTGTGAATAGCCTAAAAAATGGAATAGTGGTGAACCTACTGGGCATGGGTGCTGCCATTCTGGGGATGCAAGCGACGGTGGGATTGTTAGTTGCTAAGGCTCTTACTTCCTCAGCAATTCCATATTACCAGGGAGCCTCCCCTGGGAATAGCCCTGTTCTTGCTCTGGATGTATTCCTAGTACAGGTCTCGGCCTTTTACCAGTGGTATATAGTGATTTTAACAATGGGAACAGTGAATGTCATGTATGCTTTATTGATTGCTAGAGCAGATCGTTCTACTTCTCCTGTAACTAATGGCAGTCATGAGAGCTTCTGCAAACACTATTCTCTCTCATTTCCTGGGGCTCGTTTTCTCGTTGGAGCTACTGCGCTCGGTGACATTACCTGCTACGGAGGTTATTCCTATTCCCCGAATAGCATAACCTCCACCATCGCCCTTCCAGTCAGTTAA

Protein sequence

MQSLLSPVARSGPFPAAAALYTSDLHLNRFHRRPFSVRHSSNLNSPPNSLPSFSAIRPSSSSLLLLKAFSTLEHRRGQFCSEIRASSSPISPTVSPNDEAEKAKLAQVAKRLEKTSKYFKRLGSLGFWGQLVCTIVAAVILSFSVVITGKITSPATFYATAGGIVAAFISVFWSFGYIRLSDKLQRTANQPSKAPPRADVVNSLKNGIVVNLLGMGAAILGMQATVGLLVAKALTSSAIPYYQGASPGNSPVLALDVFLVQVSAFYQWYIVILTMGTVNVMYALLIARADRSTSPVTNGSHESFCKHYSLSFPGARFLVGATALGDITCYGGYSYSPNSITSTIALPVS
Homology
[Close]
BLAST of Lsi03G005300 vs. ExPASy Swiss-Prot
Match: Q9SHU7 (Protein TIC 21, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TIC21 PE=1 SV=1)

HSP 1 Score: 259.6 bits (662), Expect = 5.0e-68
Identity = 159/276 (57.61%), Postives = 190/276 (68.84%), Query Frame = 0 

Query: 1   MQSLLSPVARSGPFPAAAALYTSDLHLNRFHRRPFSVRHSSNLNS-PPNSLPSFSAIRPS 60
           MQSLL P A S    A A              RP   +HS N  S    SLP F+ +  +
Sbjct: 1   MQSLLLPPASSSGVSAVAL-------------RP-GFQHSFNHQSLSTRSLPLFNPLLLA 60

Query: 61  SSSLLLLKAFST----------LEHRRGQFCSEIRASSSPISPTVSPND-EAEKAKLAQV 120
                 + ++ +          +   +  F     A S P SP+  P D E +KAKLAQV
Sbjct: 61  PKKKTTISSYQSPPSLSVYGFQIGGSKPSFTPSTVAFSYPTSPSSVPGDNEVDKAKLAQV 120

Query: 121 AKRLEKTSKYFKRLGSLGFWGQLVCTIVAAVILSFSVVITGKITSPATFYATAGGIVAAF 180
           AKRLEKTS+YFKRLGS+GFWGQLV T+VAAVILSFS+V+TGK TSPATFYATA GI AAF
Sbjct: 121 AKRLEKTSRYFKRLGSIGFWGQLVSTVVAAVILSFSIVVTGKPTSPATFYATASGIAAAF 180

Query: 181 ISVFWSFGYIRLSDKLQRTANQPSKAPPRADVVNSLKNGIVVNLLGMGAAILGMQATVGL 240
           +SVFWSFGYIRLS++L+RT+  P+KAPPRADVV  L++GI+VN+LGMG+A+LGMQATVG 
Sbjct: 181 VSVFWSFGYIRLSERLRRTSIDPAKAPPRADVVKGLRSGIMVNILGMGSALLGMQATVGF 240

Query: 241 LVAKALTSSAIPYYQGASPGNSPVLALDVFLVQVSA 265
           LVAKALT+SA P+YQG S G SPVLALDVFLVQ SA
Sbjct: 241 LVAKALTTSANPFYQGVSQGYSPVLALDVFLVQASA 262

[Close]
BLAST of Lsi03G005300 vs. ExPASy TrEMBL
Match: A0A6J1GMQ4 (protein TIC 21, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111455377 PE=4 SV=1)

HSP 1 Score: 446.0 bits (1146), Expect = 1.4e-121
Identity = 241/265 (90.94%), Postives = 251/265 (94.72%), Query Frame = 0 

Query: 1   MQSLLSPVARSGPFPAAAALYTSDLHLNRFHRRPFSVRHSSNLNSPPNSLPSFSAIRPSS 60
           MQSLLSPV R GPFP  AA+YTS+LHL+ F+RRPFSVR++SNL SPPNSLPSFSAIRP S
Sbjct: 1   MQSLLSPVGRGGPFP-VAAVYTSELHLSCFNRRPFSVRYASNLKSPPNSLPSFSAIRPPS 60

Query: 61  S-SLLLLKAFSTLEHRRGQFCSEIRASSSPISPTVSPNDEAEKAKLAQVAKRLEKTSKYF 120
           S SLLLLK F TLEHRRGQFCS+  ASSSPISPTV PNDEAEKAKLAQVAKRLEKTS+YF
Sbjct: 61  SFSLLLLKNFGTLEHRRGQFCSDTCASSSPISPTVPPNDEAEKAKLAQVAKRLEKTSRYF 120

Query: 121 KRLGSLGFWGQLVCTIVAAVILSFSVVITGKITSPATFYATAGGIVAAFISVFWSFGYIR 180
           KRLG+LGFWGQLVCTIVAAVILSFSVV+TGKITSPATFYATAGGIVAAFISVFWSFGYIR
Sbjct: 121 KRLGNLGFWGQLVCTIVAAVILSFSVVVTGKITSPATFYATAGGIVAAFISVFWSFGYIR 180

Query: 181 LSDKLQRTANQPSKAPPRADVVNSLKNGIVVNLLGMGAAILGMQATVGLLVAKALTSSAI 240
           LSDKLQRTANQPSKAPPRADVVNSLKNGIVVNLLGMGAAILGMQATVGLLVAKALTSSAI
Sbjct: 181 LSDKLQRTANQPSKAPPRADVVNSLKNGIVVNLLGMGAAILGMQATVGLLVAKALTSSAI 240

Query: 241 PYYQGASPGNSPVLALDVFLVQVSA 265
           PYYQGASPGNSPVLALDVFLVQ SA
Sbjct: 241 PYYQGASPGNSPVLALDVFLVQASA 264

[Close]
BLAST of Lsi03G005300 vs. ExPASy TrEMBL
Match: A0A6J1I5V5 (protein TIC 21, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111470964 PE=4 SV=1)

HSP 1 Score: 441.0 bits (1133), Expect = 4.5e-120
Identity = 238/265 (89.81%), Postives = 249/265 (93.96%), Query Frame = 0 

Query: 1   MQSLLSPVARSGPFPAAAALYTSDLHLNRFHRRPFSVRHSSNLNSPPNSLPSFSAIRPSS 60
           MQSLLSPV R GPFP +AA+YTS+LHL+ F+RRPFSVR++SNL SP NSLPSFSAIRP S
Sbjct: 1   MQSLLSPVGRGGPFP-SAAVYTSELHLSCFNRRPFSVRYASNLKSPHNSLPSFSAIRPPS 60

Query: 61  S-SLLLLKAFSTLEHRRGQFCSEIRASSSPISPTVSPNDEAEKAKLAQVAKRLEKTSKYF 120
           S SLLLLK F  LEHRRGQFCS+ RASSSPISPTV PNDEAEKAKLAQVAKRLEKTS+YF
Sbjct: 61  SFSLLLLKIFGALEHRRGQFCSDTRASSSPISPTVPPNDEAEKAKLAQVAKRLEKTSRYF 120

Query: 121 KRLGSLGFWGQLVCTIVAAVILSFSVVITGKITSPATFYATAGGIVAAFISVFWSFGYIR 180
           KRLG+LGFWGQLVCTIVAAVILSFSVV+TGKITSPATFYATAGGIVAAFISVFWSFGYIR
Sbjct: 121 KRLGNLGFWGQLVCTIVAAVILSFSVVVTGKITSPATFYATAGGIVAAFISVFWSFGYIR 180

Query: 181 LSDKLQRTANQPSKAPPRADVVNSLKNGIVVNLLGMGAAILGMQATVGLLVAKALTSSAI 240
           LSDKLQRTANQPSKAPPRADVVNSLKNGIVVNLLGMGAAILGMQATVGLLVAKALTSSAI
Sbjct: 181 LSDKLQRTANQPSKAPPRADVVNSLKNGIVVNLLGMGAAILGMQATVGLLVAKALTSSAI 240

Query: 241 PYYQGASPGNSPVLALDVFLVQVSA 265
           PYYQG  PGNSPVLALDVFLVQ SA
Sbjct: 241 PYYQGVPPGNSPVLALDVFLVQASA 264

[Close]
BLAST of Lsi03G005300 vs. ExPASy TrEMBL
Match: A0A0A0K4J8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G071680 PE=4 SV=1)

HSP 1 Score: 441.0 bits (1133), Expect = 4.5e-120
Identity = 239/264 (90.53%), Postives = 245/264 (92.80%), Query Frame = 0 

Query: 1   MQSLLSPVARSGPFPAAAALYTSDLHLNRFHRRPFSVRHSSNLNSPPNSLPSFSAIRPSS 60
           MQSLLSPVAR+GPFPA AA+Y+SDLHL+RFHRRP SVRHS       NSLP FSAI  SS
Sbjct: 1   MQSLLSPVARTGPFPATAAVYSSDLHLSRFHRRPISVRHSF------NSLPPFSAIPSSS 60

Query: 61  SSLLLLKAFSTLEHRRGQFCSEIRASSSPISPTVSPNDEAEKAKLAQVAKRLEKTSKYFK 120
           SSLLLLK F TL+H RGQ CSE RASSSPISPTVSPNDEAEKAKLAQVAKRLEKTSKYFK
Sbjct: 61  SSLLLLKTFGTLKHSRGQLCSETRASSSPISPTVSPNDEAEKAKLAQVAKRLEKTSKYFK 120

Query: 121 RLGSLGFWGQLVCTIVAAVILSFSVVITGKITSPATFYATAGGIVAAFISVFWSFGYIRL 180
           RLGSLGFWGQLVCTIVAAVILSFSVVITGKITSPATFYATAGGIVAAFISVFWSFGYIRL
Sbjct: 121 RLGSLGFWGQLVCTIVAAVILSFSVVITGKITSPATFYATAGGIVAAFISVFWSFGYIRL 180

Query: 181 SDKLQRTANQPSKAPPRADVVNSLKNGIVVNLLGMGAAILGMQATVGLLVAKALTSSAIP 240
           SDKLQRTANQPSKAPPRADVVNSL+NGIVVNLLGMGAAILGMQATVGLLVAKALTSSAIP
Sbjct: 181 SDKLQRTANQPSKAPPRADVVNSLRNGIVVNLLGMGAAILGMQATVGLLVAKALTSSAIP 240

Query: 241 YYQGASPGNSPVLALDVFLVQVSA 265
           YYQ ASPGNSPVLALDVFLVQ SA
Sbjct: 241 YYQAASPGNSPVLALDVFLVQASA 258

[Close]
BLAST of Lsi03G005300 vs. ExPASy TrEMBL
Match: A0A5A7SP50 (Protein TIC 21 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G00960 PE=4 SV=1)

HSP 1 Score: 429.9 bits (1104), Expect = 1.0e-116
Identity = 236/272 (86.76%), Postives = 242/272 (88.97%), Query Frame = 0 

Query: 1   MQSLLSPVARSGPFPAAAALYTSDLHLNRFHRRPFSVRHSSNLNSPPNSLPSFSAI---- 60
           MQSLLSPVAR+GPFP  AA+Y+SD HL+R HRRPFSVRHS       NSLP FSAI    
Sbjct: 1   MQSLLSPVARTGPFPPTAAVYSSDFHLSRLHRRPFSVRHSF------NSLPQFSAISSSS 60

Query: 61  ----RPSSSSLLLLKAFSTLEHRRGQFCSEIRASSSPISPTVSPNDEAEKAKLAQVAKRL 120
                 SSSSLLLLK F TLEHRRGQ CSE RASSSPISPTV PNDEAEKAKLAQVAKRL
Sbjct: 61  SSSSSSSSSSLLLLKTFGTLEHRRGQLCSETRASSSPISPTVPPNDEAEKAKLAQVAKRL 120

Query: 121 EKTSKYFKRLGSLGFWGQLVCTIVAAVILSFSVVITGKITSPATFYATAGGIVAAFISVF 180
           EKTS+YFKRLGSLGFWGQLVCTIVAAVILSFSVVITGKI SPATFYATAGGIVAAFISVF
Sbjct: 121 EKTSRYFKRLGSLGFWGQLVCTIVAAVILSFSVVITGKIASPATFYATAGGIVAAFISVF 180

Query: 181 WSFGYIRLSDKLQRTANQPSKAPPRADVVNSLKNGIVVNLLGMGAAILGMQATVGLLVAK 240
           WSFGYIRLSDKLQRTANQPSKAPPRADVVNSL+NGIVVNLLGMGAAILGMQATVGLLVAK
Sbjct: 181 WSFGYIRLSDKLQRTANQPSKAPPRADVVNSLRNGIVVNLLGMGAAILGMQATVGLLVAK 240

Query: 241 ALTSSAIPYYQGASPGNSPVLALDVFLVQVSA 265
           ALTSSAIPYYQ ASPGNSPVLALDVFLVQ SA
Sbjct: 241 ALTSSAIPYYQAASPGNSPVLALDVFLVQASA 266

[Close]
BLAST of Lsi03G005300 vs. ExPASy TrEMBL
Match: A0A1S3C0L3 (protein TIC 21, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103495279 PE=4 SV=1)

HSP 1 Score: 429.9 bits (1104), Expect = 1.0e-116
Identity = 236/272 (86.76%), Postives = 242/272 (88.97%), Query Frame = 0 

Query: 1   MQSLLSPVARSGPFPAAAALYTSDLHLNRFHRRPFSVRHSSNLNSPPNSLPSFSAI---- 60
           MQSLLSPVAR+GPFP  AA+Y+SD HL+R HRRPFSVRHS       NSLP FSAI    
Sbjct: 1   MQSLLSPVARTGPFPPTAAVYSSDFHLSRLHRRPFSVRHSF------NSLPQFSAISSSS 60

Query: 61  ----RPSSSSLLLLKAFSTLEHRRGQFCSEIRASSSPISPTVSPNDEAEKAKLAQVAKRL 120
                 SSSSLLLLK F TLEHRRGQ CSE RASSSPISPTV PNDEAEKAKLAQVAKRL
Sbjct: 61  SSSSSSSSSSLLLLKTFGTLEHRRGQLCSETRASSSPISPTVPPNDEAEKAKLAQVAKRL 120

Query: 121 EKTSKYFKRLGSLGFWGQLVCTIVAAVILSFSVVITGKITSPATFYATAGGIVAAFISVF 180
           EKTS+YFKRLGSLGFWGQLVCTIVAAVILSFSVVITGKI SPATFYATAGGIVAAFISVF
Sbjct: 121 EKTSRYFKRLGSLGFWGQLVCTIVAAVILSFSVVITGKIASPATFYATAGGIVAAFISVF 180

Query: 181 WSFGYIRLSDKLQRTANQPSKAPPRADVVNSLKNGIVVNLLGMGAAILGMQATVGLLVAK 240
           WSFGYIRLSDKLQRTANQPSKAPPRADVVNSL+NGIVVNLLGMGAAILGMQATVGLLVAK
Sbjct: 181 WSFGYIRLSDKLQRTANQPSKAPPRADVVNSLRNGIVVNLLGMGAAILGMQATVGLLVAK 240

Query: 241 ALTSSAIPYYQGASPGNSPVLALDVFLVQVSA 265
           ALTSSAIPYYQ ASPGNSPVLALDVFLVQ SA
Sbjct: 241 ALTSSAIPYYQAASPGNSPVLALDVFLVQASA 266

[Close]
BLAST of Lsi03G005300 vs. NCBI nr
Match: XP_038888764.1 (protein TIC 21, chloroplastic [Benincasa hispida])

HSP 1 Score: 459.9 bits (1182), Expect = 1.9e-125
Identity = 247/265 (93.21%), Postives = 254/265 (95.85%), Query Frame = 0 

Query: 1   MQSLLSPVARSGPFPAAAALYTSDLHLNRFHRRPFSVRHSSNLNSPPNSLPSFSAIR-PS 60
           MQSLLSPVARSGPFPAAAA+Y+SDLHL+RFHRRPFSVRHSSNLNSPPNSL SF+A+R  S
Sbjct: 1   MQSLLSPVARSGPFPAAAAVYSSDLHLSRFHRRPFSVRHSSNLNSPPNSLSSFNAVRSSS 60

Query: 61  SSSLLLLKAFSTLEHRRGQFCSEIRASSSPISPTVSPNDEAEKAKLAQVAKRLEKTSKYF 120
           SSSLLLLK F TLEHRRGQF SE  ASSSPISP V PNDEA+KAKLAQVAKRLEKTSKYF
Sbjct: 61  SSSLLLLKTFGTLEHRRGQFFSETHASSSPISPAVPPNDEADKAKLAQVAKRLEKTSKYF 120

Query: 121 KRLGSLGFWGQLVCTIVAAVILSFSVVITGKITSPATFYATAGGIVAAFISVFWSFGYIR 180
           KRLGSLGFWGQLVCTIVAAVILSFSVVITGKITSPATFYATAGGIVAAFISVFWSFGYIR
Sbjct: 121 KRLGSLGFWGQLVCTIVAAVILSFSVVITGKITSPATFYATAGGIVAAFISVFWSFGYIR 180

Query: 181 LSDKLQRTANQPSKAPPRADVVNSLKNGIVVNLLGMGAAILGMQATVGLLVAKALTSSAI 240
           LSDKLQRTANQPSKAPPRADVVNSL+NGIVVNLLGMGAAILGMQATVGLLVAKALTSSAI
Sbjct: 181 LSDKLQRTANQPSKAPPRADVVNSLRNGIVVNLLGMGAAILGMQATVGLLVAKALTSSAI 240

Query: 241 PYYQGASPGNSPVLALDVFLVQVSA 265
           PYYQGASPGNSPVLALDVFLVQ SA
Sbjct: 241 PYYQGASPGNSPVLALDVFLVQASA 265

[Close]
BLAST of Lsi03G005300 vs. NCBI nr
Match: XP_022952785.1 (protein TIC 21, chloroplastic [Cucurbita moschata])

HSP 1 Score: 446.0 bits (1146), Expect = 2.9e-121
Identity = 241/265 (90.94%), Postives = 251/265 (94.72%), Query Frame = 0 

Query: 1   MQSLLSPVARSGPFPAAAALYTSDLHLNRFHRRPFSVRHSSNLNSPPNSLPSFSAIRPSS 60
           MQSLLSPV R GPFP  AA+YTS+LHL+ F+RRPFSVR++SNL SPPNSLPSFSAIRP S
Sbjct: 1   MQSLLSPVGRGGPFP-VAAVYTSELHLSCFNRRPFSVRYASNLKSPPNSLPSFSAIRPPS 60

Query: 61  S-SLLLLKAFSTLEHRRGQFCSEIRASSSPISPTVSPNDEAEKAKLAQVAKRLEKTSKYF 120
           S SLLLLK F TLEHRRGQFCS+  ASSSPISPTV PNDEAEKAKLAQVAKRLEKTS+YF
Sbjct: 61  SFSLLLLKNFGTLEHRRGQFCSDTCASSSPISPTVPPNDEAEKAKLAQVAKRLEKTSRYF 120

Query: 121 KRLGSLGFWGQLVCTIVAAVILSFSVVITGKITSPATFYATAGGIVAAFISVFWSFGYIR 180
           KRLG+LGFWGQLVCTIVAAVILSFSVV+TGKITSPATFYATAGGIVAAFISVFWSFGYIR
Sbjct: 121 KRLGNLGFWGQLVCTIVAAVILSFSVVVTGKITSPATFYATAGGIVAAFISVFWSFGYIR 180

Query: 181 LSDKLQRTANQPSKAPPRADVVNSLKNGIVVNLLGMGAAILGMQATVGLLVAKALTSSAI 240
           LSDKLQRTANQPSKAPPRADVVNSLKNGIVVNLLGMGAAILGMQATVGLLVAKALTSSAI
Sbjct: 181 LSDKLQRTANQPSKAPPRADVVNSLKNGIVVNLLGMGAAILGMQATVGLLVAKALTSSAI 240

Query: 241 PYYQGASPGNSPVLALDVFLVQVSA 265
           PYYQGASPGNSPVLALDVFLVQ SA
Sbjct: 241 PYYQGASPGNSPVLALDVFLVQASA 264

[Close]
BLAST of Lsi03G005300 vs. NCBI nr
Match: KAG6571949.1 (Protein TIC 21, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] >KAG7011639.1 Protein TIC 21, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 441.8 bits (1135), Expect = 5.5e-120
Identity = 238/265 (89.81%), Postives = 250/265 (94.34%), Query Frame = 0 

Query: 1   MQSLLSPVARSGPFPAAAALYTSDLHLNRFHRRPFSVRHSSNLNSPPNSLPSFSAIRPSS 60
           MQSLLSPV R GPFP +AA+YTS+LHL+ F+RRPFSVR++SN  SP NSLPSFSAIRP S
Sbjct: 1   MQSLLSPVGRGGPFP-SAAVYTSELHLSCFNRRPFSVRYASNFKSPHNSLPSFSAIRPPS 60

Query: 61  S-SLLLLKAFSTLEHRRGQFCSEIRASSSPISPTVSPNDEAEKAKLAQVAKRLEKTSKYF 120
           S SLLL K F TLEHRRGQFCS+ RASSSPISPTV PNDEAEKAKLAQVAKRLEKTS+YF
Sbjct: 61  SFSLLLFKNFGTLEHRRGQFCSDTRASSSPISPTVPPNDEAEKAKLAQVAKRLEKTSRYF 120

Query: 121 KRLGSLGFWGQLVCTIVAAVILSFSVVITGKITSPATFYATAGGIVAAFISVFWSFGYIR 180
           +RLG+LGFWGQLVCTIVAAVILSFSVV+TGKITSPATFYATAGGIVAAFISVFWSFGYIR
Sbjct: 121 RRLGNLGFWGQLVCTIVAAVILSFSVVVTGKITSPATFYATAGGIVAAFISVFWSFGYIR 180

Query: 181 LSDKLQRTANQPSKAPPRADVVNSLKNGIVVNLLGMGAAILGMQATVGLLVAKALTSSAI 240
           LSDKLQRTANQPSKAPPRADVVNSLKNGIVVNLLGMGAAILGMQATVGLLVAKALTSSAI
Sbjct: 181 LSDKLQRTANQPSKAPPRADVVNSLKNGIVVNLLGMGAAILGMQATVGLLVAKALTSSAI 240

Query: 241 PYYQGASPGNSPVLALDVFLVQVSA 265
           PYYQGASPGNSPVLALDVFLVQ SA
Sbjct: 241 PYYQGASPGNSPVLALDVFLVQASA 264

[Close]
BLAST of Lsi03G005300 vs. NCBI nr
Match: XP_022972396.1 (protein TIC 21, chloroplastic [Cucurbita maxima])

HSP 1 Score: 441.0 bits (1133), Expect = 9.3e-120
Identity = 238/265 (89.81%), Postives = 249/265 (93.96%), Query Frame = 0 

Query: 1   MQSLLSPVARSGPFPAAAALYTSDLHLNRFHRRPFSVRHSSNLNSPPNSLPSFSAIRPSS 60
           MQSLLSPV R GPFP +AA+YTS+LHL+ F+RRPFSVR++SNL SP NSLPSFSAIRP S
Sbjct: 1   MQSLLSPVGRGGPFP-SAAVYTSELHLSCFNRRPFSVRYASNLKSPHNSLPSFSAIRPPS 60

Query: 61  S-SLLLLKAFSTLEHRRGQFCSEIRASSSPISPTVSPNDEAEKAKLAQVAKRLEKTSKYF 120
           S SLLLLK F  LEHRRGQFCS+ RASSSPISPTV PNDEAEKAKLAQVAKRLEKTS+YF
Sbjct: 61  SFSLLLLKIFGALEHRRGQFCSDTRASSSPISPTVPPNDEAEKAKLAQVAKRLEKTSRYF 120

Query: 121 KRLGSLGFWGQLVCTIVAAVILSFSVVITGKITSPATFYATAGGIVAAFISVFWSFGYIR 180
           KRLG+LGFWGQLVCTIVAAVILSFSVV+TGKITSPATFYATAGGIVAAFISVFWSFGYIR
Sbjct: 121 KRLGNLGFWGQLVCTIVAAVILSFSVVVTGKITSPATFYATAGGIVAAFISVFWSFGYIR 180

Query: 181 LSDKLQRTANQPSKAPPRADVVNSLKNGIVVNLLGMGAAILGMQATVGLLVAKALTSSAI 240
           LSDKLQRTANQPSKAPPRADVVNSLKNGIVVNLLGMGAAILGMQATVGLLVAKALTSSAI
Sbjct: 181 LSDKLQRTANQPSKAPPRADVVNSLKNGIVVNLLGMGAAILGMQATVGLLVAKALTSSAI 240

Query: 241 PYYQGASPGNSPVLALDVFLVQVSA 265
           PYYQG  PGNSPVLALDVFLVQ SA
Sbjct: 241 PYYQGVPPGNSPVLALDVFLVQASA 264

[Close]
BLAST of Lsi03G005300 vs. NCBI nr
Match: XP_004136957.1 (protein TIC 21, chloroplastic [Cucumis sativus] >KGN43879.1 hypothetical protein Csa_017075 [Cucumis sativus])

HSP 1 Score: 441.0 bits (1133), Expect = 9.3e-120
Identity = 239/264 (90.53%), Postives = 245/264 (92.80%), Query Frame = 0 

Query: 1   MQSLLSPVARSGPFPAAAALYTSDLHLNRFHRRPFSVRHSSNLNSPPNSLPSFSAIRPSS 60
           MQSLLSPVAR+GPFPA AA+Y+SDLHL+RFHRRP SVRHS       NSLP FSAI  SS
Sbjct: 1   MQSLLSPVARTGPFPATAAVYSSDLHLSRFHRRPISVRHSF------NSLPPFSAIPSSS 60

Query: 61  SSLLLLKAFSTLEHRRGQFCSEIRASSSPISPTVSPNDEAEKAKLAQVAKRLEKTSKYFK 120
           SSLLLLK F TL+H RGQ CSE RASSSPISPTVSPNDEAEKAKLAQVAKRLEKTSKYFK
Sbjct: 61  SSLLLLKTFGTLKHSRGQLCSETRASSSPISPTVSPNDEAEKAKLAQVAKRLEKTSKYFK 120

Query: 121 RLGSLGFWGQLVCTIVAAVILSFSVVITGKITSPATFYATAGGIVAAFISVFWSFGYIRL 180
           RLGSLGFWGQLVCTIVAAVILSFSVVITGKITSPATFYATAGGIVAAFISVFWSFGYIRL
Sbjct: 121 RLGSLGFWGQLVCTIVAAVILSFSVVITGKITSPATFYATAGGIVAAFISVFWSFGYIRL 180

Query: 181 SDKLQRTANQPSKAPPRADVVNSLKNGIVVNLLGMGAAILGMQATVGLLVAKALTSSAIP 240
           SDKLQRTANQPSKAPPRADVVNSL+NGIVVNLLGMGAAILGMQATVGLLVAKALTSSAIP
Sbjct: 181 SDKLQRTANQPSKAPPRADVVNSLRNGIVVNLLGMGAAILGMQATVGLLVAKALTSSAIP 240

Query: 241 YYQGASPGNSPVLALDVFLVQVSA 265
           YYQ ASPGNSPVLALDVFLVQ SA
Sbjct: 241 YYQAASPGNSPVLALDVFLVQASA 258

[Close]
BLAST of Lsi03G005300 vs. TAIR 10
Match: AT2G15290.1 (translocon at inner membrane of chloroplasts 21 )

HSP 1 Score: 259.6 bits (662), Expect = 3.6e-69
Identity = 159/276 (57.61%), Postives = 190/276 (68.84%), Query Frame = 0 

Query: 1   MQSLLSPVARSGPFPAAAALYTSDLHLNRFHRRPFSVRHSSNLNS-PPNSLPSFSAIRPS 60
           MQSLL P A S    A A              RP   +HS N  S    SLP F+ +  +
Sbjct: 1   MQSLLLPPASSSGVSAVAL-------------RP-GFQHSFNHQSLSTRSLPLFNPLLLA 60

Query: 61  SSSLLLLKAFST----------LEHRRGQFCSEIRASSSPISPTVSPND-EAEKAKLAQV 120
                 + ++ +          +   +  F     A S P SP+  P D E +KAKLAQV
Sbjct: 61  PKKKTTISSYQSPPSLSVYGFQIGGSKPSFTPSTVAFSYPTSPSSVPGDNEVDKAKLAQV 120

Query: 121 AKRLEKTSKYFKRLGSLGFWGQLVCTIVAAVILSFSVVITGKITSPATFYATAGGIVAAF 180
           AKRLEKTS+YFKRLGS+GFWGQLV T+VAAVILSFS+V+TGK TSPATFYATA GI AAF
Sbjct: 121 AKRLEKTSRYFKRLGSIGFWGQLVSTVVAAVILSFSIVVTGKPTSPATFYATASGIAAAF 180

Query: 181 ISVFWSFGYIRLSDKLQRTANQPSKAPPRADVVNSLKNGIVVNLLGMGAAILGMQATVGL 240
           +SVFWSFGYIRLS++L+RT+  P+KAPPRADVV  L++GI+VN+LGMG+A+LGMQATVG 
Sbjct: 181 VSVFWSFGYIRLSERLRRTSIDPAKAPPRADVVKGLRSGIMVNILGMGSALLGMQATVGF 240

Query: 241 LVAKALTSSAIPYYQGASPGNSPVLALDVFLVQVSA 265
           LVAKALT+SA P+YQG S G SPVLALDVFLVQ SA
Sbjct: 241 LVAKALTTSANPFYQGVSQGYSPVLALDVFLVQASA 262

The following BLAST results are available for this feature:
BLAST of Lsi03G005300 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9SHU75.0e-6857.61Protein TIC 21, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TIC21 PE=1 SV=1[more]
BLAST of Lsi03G005300 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1GMQ41.4e-12190.94protein TIC 21, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111455377 PE=4... [more]
A0A6J1I5V54.5e-12089.81protein TIC 21, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111470964 PE=4 S... [more]
A0A0A0K4J84.5e-12090.53Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G071680 PE=4 SV=1[more]
A0A5A7SP501.0e-11686.76Protein TIC 21 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G00960 ... [more]
A0A1S3C0L31.0e-11686.76protein TIC 21, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103495279 PE=4 SV=1[more]
BLAST of Lsi03G005300 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038888764.11.9e-12593.21protein TIC 21, chloroplastic [Benincasa hispida][more]
XP_022952785.12.9e-12190.94protein TIC 21, chloroplastic [Cucurbita moschata][more]
KAG6571949.15.5e-12089.81Protein TIC 21, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] >... [more]
XP_022972396.19.3e-12089.81protein TIC 21, chloroplastic [Cucurbita maxima][more]
XP_004136957.19.3e-12090.53protein TIC 21, chloroplastic [Cucumis sativus] >KGN43879.1 hypothetical protein... [more]
BLAST of Lsi03G005300 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G15290.13.6e-6957.61translocon at inner membrane of chloroplasts 21 [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022051Protein of unknown function DUF3611PFAMPF12263DUF3611coord: 110..262
e-value: 2.0E-42
score: 145.0
IPR022051Protein of unknown function DUF3611PANTHERPTHR34548PROTEIN TIC 21, CHLOROPLASTICcoord: 1..265

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi03G005300.1Lsi03G005300.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane