Lsi02G018340.1 (mRNA) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATTATATGTAAGTTCATTTGGTTTTGAGTTATGGTTGTTCAGTAATGTTGTTCCTACTCCACTCCCAAACTCCGAATTCATGAATTCATGCTCATTTTCCGTCCAAGGAAGAAATGTAACTCTTCATTTCTCTCTCTCAAATCGGAGTCTCTCAACGGCGGATTGAATCGTTGGCTCCATACAATCTGTAGGTTCCAAGTGTTGAAGAACGCGTTGTCGACGTCGTTACCTCCATGATCAACAATCAGTGTTGCAATTAAGAGGTAACTACTTTTGTTTTCATGCTCTCGCTTCTTCGTATATTGTATAGCAGCTCCTGTTAAATCTCTATTCTTACGCTTTCTTTTATCTTAATCGCTGATTTTGACGAAATCATGCTCTACTACATTATCTATTTTGCATCTAAACTTCGATTGAAGAAAGTTTGTTGCTTGTATCTTTATCAGCTTTTCGTCCGTCTTTCTTAGACTATCGCTTCAAGCCTTCTCTTACACCTCTATCTCAGTCCAGGCTCTATCAAAACAAAAATGTCGTTCCATATCGGTAAGATTGCAAGCTTCATTTCCTTGATTTAATCCTCTTTCAATACCTCGTTTTATCTTGTTTATGACTTATGTACGCCAACTGTTTGAGTAAATTTCATAATGGAAAAATAGGAAAATATTAGGAGAAATACAGAGGAAGAAAGCTCAGTTGTTTTATTATTGTGATTGAAAAGCTATGCTACTTTTAAGTAGAGAATGTATTGAGTTGAAGACACTTTGCTATAGGGAACATGAACAACTACCACGTTGAAAATATTATCAAATGCATATGATTTTTTTATTTTTTATTTTCAAAATAGACAGCATGAATACAAATTAGGGTAATATCGCTGCCTTGGACTCTCAATACTTTGTAATATTGATTGTTGTTTTTTTTTTAATACTTTTTTTTGTTTAAGGCAAGTTAGCCTTGTTATTTTGTAAATTTGTTAGGCCAATAGATACTGTAGAGCAATACCTTTGGATGGTGTGTATACTGTTTGTAACTTAAATCCATAGATCAAAGAATGATTTAACAGATTTCGAACTTTTAACAAAATTGTTTGAATAGTTTGGTGAAGTGGAAGATTCAATTTCAATCATAGCACCTGAAGGTGTTTTTGCTCTCTCTTTTTTCTTAGAAGATTTGCTTTTCTTTTTTGATTTAAGCCAAATATGAGATTTTGTGCTATTAAATAGTGAACTTTGGTTTTGAATAGGATGGACATGTTGTTTTGTTTTTAAATATAGGAGAACATGTTATCTTTTGGTTAATTTCAACCATCCTCTTTCCACTTAATTGATTTTAGTTTCTAACTTTTAACTTGTTTAAAGTTGAAACTAATTTTACAACTGTTTTATAGATTTTGTAGAATGTAGGTTGTAGAATGTCATTTTGAATTTTGTACCTTGATGCTTACATTTGCACTTTCAATCACCGCAGGCTTTTGGCTTCACTCATTTCATCTTCGTGAGGTCTAGTGTCTCTGGACTATGGTTTGTTTGCTCCTCAGAAGGTTCATAAAACTAATTTCTAGTTTCTTGGATTGTTGCTAGTTACTTTTCTGATTGGCTTTAAGGTTTCTCTCGATATTAAATTTTATTTCCTTTTTTTGTTGAGAATCTATGAGACCGACCTTGTTTTATCTCTTTAATTGTAATTTTTTTAAGGTTTTAATTATAGCATCTGTAGTAATTCATATATTTATTCTTTACAGGTAGAGGAGAAGCTGAAAGACTAGGAAAGGAGAAAACATTTGCATTCTACATCGAAGCTCAAGGTTAATAAAACTATACTTGGATTATTGTCTGGGAAATTAGATTTTTTTTTTTTTTTTTTTTTTTTGGATTCATTTTCTAAATGTGATATGATTTTGGGAACATTTGAATTATGTTCTTCGTACTCTATTTAGACTTAGGAATAATGACTTTGAGTATGAATAAATTTAGGTTAAATTATAATTTCAGTCTTGAACTTTATCTGTATGATTTGGATCAAGATTTGAGGCTTTATGTACAGTTTTTTAGTGGCTCGAGAGTTTTGTATGTTGTATTGCAAAGCCTTTGTGGCAATTAATTATTATTTATTTATAAGGTTTGATTTGATCTTTTTGGTTTAGACATAGTTTTGATTTGGTCGATATAGTTTAATGTGAGGGAGAGATGGGAACTTGAAGGATTTTAGTTTTTTTTTTTCTGTTTATAAGCAATAGTGATACACTTTGCATTCTGGTTGTTGTTGTAGCTCTTTGAACCCACTTTGCATTTAGGTTGCATGTTTCTTTTCTCTTCTCCATTTTACATCTCAATCTTTTGTTCGTATTCATCATTCATCATCTCCATAAACTTAATTCACCAAATTCTGTGGAGAGTACTGGATCATGATTTGCTACAATCGATAAATCTCTATTTTGTACTAGGGAGATCAACCTATAAATTAATACATAGCCGATGAAAACATCTAAATGCTGATAGATTTTCTTCTCTGCGCATCAATTGTTATTAGTAAGTTTATCATTTTAACTCGGAGATTTCAGGTTCTTTTCCTGAATCATGGAAGATCATCAAGGAAAGAGGAGCTCCAAAACATCCATTATCAAAGGCCTAAACGCTTCGGTTCGGCCGATCAACATTCAAATGGACAATCACTTGGTAATTGGGGGAACTAGACACTATCACCAGGAAACAAACTGTAAAAGTCCGACGATCTTCGATCGTTACACCATTATGAATCACTATGCTAGCAGCACTCCTGGAAGCAATAGCTTCGGTCCTCGGGGAACAGGATCGCCATTGTCACCACTTTCGGCTATCGAGAATTTGGAAACACCACGTATAAGGTCTCCACAAATTTATGGAACTCCAGTGAAGGTTGATGAAGAAGTGATAGTAATGGATGGGATTTTGATCAATTCGATTCCTGGTGGAGCGAAGACAGTGAGGTCTCCTTTAGATTCTGGAAGTGGTGGAGGTTTGTTGTCAGGCAAAAATCAATACAGAACAGACATTTGCCGCTACTGGGAGGATTCTGGAAGCTGCCGCTTCGGCCACAAATGCCAGGTTAGTTATTTTGTCCCCACTGTAAGGATCTGATCTCAATTATTGCCTCTGCAAATTTATTGGCCACAATGCAGTATCTTTGTTTATTACTTAAAAGACACCTTACCCCTGTGTCTTGAGGTTTGATTGCTAATAAGAGAAATGGATAAAAAAGATATTTTCAAAGAATAGTCTGATTAAAGATTAGTCGTTCCTGTTCAGGTTTAATTGGTGAGCTTTTGGACTGAATTATTTATTTATCATTTAATGTGGGTTAATTTTCCATTTATTCTTGTTTCGTGTGGGTAGACTGAATTTATTTTTTATAGAATAACTTGATTGAAATAAATTGATGCATTAAGAGAGAGGTACAGGATGAATCAATGTCTCTTAGCCAAGGTTTTTTGAGAAAGCTCAGATGGTGATTCAAGGATTGAATATATGTATCCCACTCCCAATTTTGTTTAAAATTTGGTCTCAGATAATGAACTCAGTTCTAATGTGTTAATAGATAGAGTGAAACAGTAGGTTGGCTGCCAAAATTGGTGCAGTTATGTATTATCACACCAAGTTAGTAGATTAGCAGATAATTGAACCTAACCTTTTTCAAAAGTTGGATTAACCATAGACTTCAGCAAGAGCCCGACATTCCCTTTCAGTGGTTGGATTGAGTACCAACATTGAGTTTATTAGAGCATCATTATACATGACACGAATTCAAAGCTAAAGATAACACAACACTACTAACTTCCAGTATCTATCAATCAACGACATCCTGTGCTCTTGATTTCAATAGTGGATATATTATTCAACTTCTTGGGTAATATAATTCAGTCATGGGGGACGGGGACTTGGGATTGGATCCTCCTATTTAATACTTTTAAATAATTTGGTTGGCTGACTTTATTCCAAGAATAGGATCAAAAGCTTGAATTTCTCAATTTTTTTTAATGATCTATATGTAAGCTAAAAATTATAAACCTAATAGAATTTGAGTCCATTGATCTAAAATGTAAGTAATTAAAATATTTTGTTTAGTTACTCATTTCGTTATCCATTCACCGAAAGTTTGGGCTCCTTCATAATTCTTATGTAATTGTATTTGTCTTCATTATGGTATAAATAGAGAAAAAATTAGTTTATATTTAGAACCTCATAGCTAGACACTACGTAAAACTATCATTAAACTCAAAAGTATAGCATTATAGATTAAATTGCGATGTACATGTCAGAGCATGCTTAATCTTTTCTAATAATATTCTCAATCATACATGTTGAAATTAATGGGAAATAGTTTGATTTGCATACAGTAGTTGATATGGTATTTCAGAATTGTATTTTCTGTTTGCAGTTTGCACATGGAAAGGAGGACCTTCGGCCAGGTCGTTTACCGGTTAGAACCAAGCCTAAGGTACCATTGACATCTGATAAATTAAATATACTGCAGGTTTTGTTCGGATAAAAGACACTTTTAGATTTGTATATTCTTCGGTACTACAGTTCAACGAAGCGTATGGTTCCAAGTTTCGCAACAATCATTTACAAACAGGAATAGCTGCAACAACAACACAATCAAACTCAGTAGATACAATCACCAAAACTGAAATTAGCAAAAGAGAGGGTCTTGGTACAACATCCTCAGCTTCAATACGCCACATGAACACGAACACGAAGCCAAGCCTTATTTCCACCATTTCCATCATTGATTGGTCACCTGAAGATGATGGCATTAAAATTGCTGTCCCGGAAACAGAGTCGACAAAAAGAGAAGATGTAGACCAACACATCCATGGAGTTCTTTATGGTTCCACCACTGAGAGGACCAAAACAAGATTACCAGTTTTCACTCAACTCTGCTCTGAAAAACTCCAACAAGAATAGGTACGCCAAGCTTTTTCCCATCATCAAATTGCAAATGATTCTCTTAAAATCTACTCTAATTGGTTACACCATTTTTTTTTAAACACTCAGTCAGCTTTGAAATAGGAGCTTTCATGGGTCATATTAGTACTTACTCATCAGTCATAAAGAAGGATTATGTTAGAAGAAATTAAGTAATAAGGAAAAAAGTTTTTCATTACTTTGTTGTAGCTGTATGTACAATGAGCAAAACAATGATCCAAGTTGTACATCACTATATCGTTTGCATGAGGCTCTGATGATATTGATGGTAAATTCTAATTCTGAAAAAAAAATGATGAACAGAAATATTATAGATTTATATG ATTATATGTAAGTTCATTTGGTTTTGAGTTATGGTTGTTCAGTAATGTTGTTCCTACTCCACTCCCAAACTCCGAATTCATGAATTCATGCTCATTTTCCGTCCAAGGAAGAAATGTAACTCTTCATTTCTCTCTCTCAAATCGGAGTCTCTCAACGGCGGATTGAATCGTTGGCTCCATACAATCTGTAGGTTCCAAGTGTTGAAGAACGCGTTGTCGACGTCGTTACCTCCATGATCAACAATCAGTGTTGCAATTAAGAGCTTTTCGTCCGTCTTTCTTAGACTATCGCTTCAAGCCTTCTCTTACACCTCTATCTCAGTCCAGGCTCTATCAAAACAAAAATGTCGTTCCATATCGGCTTTTGGCTTCACTCATTTCATCTTCGTGAGGTCTAGTGTCTCTGGACTATGGTTTGTTTGCTCCTCAGAAGGTAGAGGAGAAGCTGAAAGACTAGGAAAGGAGAAAACATTTGCATTCTACATCGAAGCTCAAGGTTCTTTTCCTGAATCATGGAAGATCATCAAGGAAAGAGGAGCTCCAAAACATCCATTATCAAAGGCCTAAACGCTTCGGTTCGGCCGATCAACATTCAAATGGACAATCACTTGGTAATTGGGGGAACTAGACACTATCACCAGGAAACAAACTGTAAAAGTCCGACGATCTTCGATCGTTACACCATTATGAATCACTATGCTAGCAGCACTCCTGGAAGCAATAGCTTCGGTCCTCGGGGAACAGGATCGCCATTGTCACCACTTTCGGCTATCGAGAATTTGGAAACACCACGTATAAGGTCTCCACAAATTTATGGAACTCCAGTGAAGGTTGATGAAGAAGTGATAGTAATGGATGGGATTTTGATCAATTCGATTCCTGGTGGAGCGAAGACAGTGAGGTCTCCTTTAGATTCTGGAAGTGGTGGAGGTTTGTTGTCAGGCAAAAATCAATACAGAACAGACATTTGCCGCTACTGGGAGGATTCTGGAAGCTGCCGCTTCGGCCACAAATGCCAGTTTGCACATGGAAAGGAGGACCTTCGGCCAGGTCGTTTACCGGTTAGAACCAAGCCTAAGGTACCATTGACATCTGATAAATTAAATATACTGCAGTTCAACGAAGCGTATGGTTCCAAGTTTCGCAACAATCATTTACAAACAGGAATAGCTGCAACAACAACACAATCAAACTCAGTAGATACAATCACCAAAACTGAAATTAGCAAAAGAGAGGGTCTTGGTACAACATCCTCAGCTTCAATACGCCACATGAACACGAACACGAAGCCAAGCCTTATTTCCACCATTTCCATCATTGATTGGTCACCTGAAGATGATGGCATTAAAATTGCTGTCCCGGAAACAGAGTCGACAAAAAGAGAAGATGTAGACCAACACATCCATGGAGTTCTTTATGGTTCCACCACTGAGAGGACCAAAACAAGATTACCAGTTTTCACTCAACTCTGCTCTGAAAAACTCCAACAAGAATAGGTACGCCAAGCTTTTTCCCATCATCAAATTGCAAATGATTCTCTTAAAATCTACTCTAATTGGTTACACCATTTTTTTTTAAACACTCAGTCAGCTTTGAAATAGGAGCTTTCATGGGTCATATTAGTACTTACTCATCAGTCATAAAGAAGGATTATGTTAGAAGAAATTAAGTAATAAGGAAAAAAGTTTTTCATTACTTTGTTGTAGCTGTATGTACAATGAGCAAAACAATGATCCAAGTTGTACATCACTATATCGTTTGCATGAGGCTCTGATGATATTGATGGTAAATTCTAATTCTGAAAAAAAAATGATGAACAGAAATATTATAGATTTATATG ATGGAAGATCATCAAGGAAAGAGGAGCTCCAAAACATCCATTATCAAAGGCCTAAACGCTTCGGTTCGGCCGATCAACATTCAAATGGACAATCACTTGGTAATTGGGGGAACTAGACACTATCACCAGGAAACAAACTGTAAAAGTCCGACGATCTTCGATCGTTACACCATTATGAATCACTATGCTAGCAGCACTCCTGGAAGCAATAGCTTCGGTCCTCGGGGAACAGGATCGCCATTGTCACCACTTTCGGCTATCGAGAATTTGGAAACACCACGTATAAGGTCTCCACAAATTTATGGAACTCCAGTGAAGGTTGATGAAGAAGTGATAGTAATGGATGGGATTTTGATCAATTCGATTCCTGGTGGAGCGAAGACAGTGAGGTCTCCTTTAGATTCTGGAAGTGGTGGAGGTTTGTTGTCAGGCAAAAATCAATACAGAACAGACATTTGCCGCTACTGGGAGGATTCTGGAAGCTGCCGCTTCGGCCACAAATGCCAGTTTGCACATGGAAAGGAGGACCTTCGGCCAGGTCGTTTACCGGTTAGAACCAAGCCTAAGGTACCATTGACATCTGATAAATTAAATATACTGCAGTTCAACGAAGCGTATGGTTCCAAGTTTCGCAACAATCATTTACAAACAGGAATAGCTGCAACAACAACACAATCAAACTCAGTAGATACAATCACCAAAACTGAAATTAGCAAAAGAGAGGGTCTTGGTACAACATCCTCAGCTTCAATACGCCACATGAACACGAACACGAAGCCAAGCCTTATTTCCACCATTTCCATCATTGATTGGTCACCTGAAGATGATGGCATTAAAATTGCTGTCCCGGAAACAGAGTCGACAAAAAGAGAAGATGTAGACCAACACATCCATGGAGTTCTTTATGGTTCCACCACTGAGAGGACCAAAACAAGATTACCAGTTTTCACTCAACTCTGCTCTGAAAAACTCCAACAAGAATAG MEDHQGKRSSKTSIIKGLNASVRPINIQMDNHLVIGGTRHYHQETNCKSPTIFDRYTIMNHYASSTPGSNSFGPRGTGSPLSPLSAIENLETPRIRSPQIYGTPVKVDEEVIVMDGILINSIPGGAKTVRSPLDSGSGGGLLSGKNQYRTDICRYWEDSGSCRFGHKCQFAHGKEDLRPGRLPVRTKPKVPLTSDKLNILQFNEAYGSKFRNNHLQTGIAATTTQSNSVDTITKTEISKREGLGTTSSASIRHMNTNTKPSLISTISIIDWSPEDDGIKIAVPETESTKREDVDQHIHGVLYGSTTERTKTRLPVFTQLCSEKLQQE Homology
BLAST of Lsi02G018340.1 vs. ExPASy Swiss-Prot
Match: Q5ISE2 (mRNA decay activator protein ZFP36L3 OS=Mus musculus OX=10090 GN=Zfp36l3 PE=1 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 3.6e-07 Identity = 22/42 (52.38%), Postives = 32/42 (76.19%), Query Frame = 0
BLAST of Lsi02G018340.1 vs. ExPASy Swiss-Prot
Match: P47974 (mRNA decay activator protein ZFP36L2 OS=Homo sapiens OX=9606 GN=ZFP36L2 PE=1 SV=3) HSP 1 Score: 55.5 bits (132), Expect = 1.4e-06 Identity = 21/41 (51.22%), Postives = 31/41 (75.61%), Query Frame = 0
BLAST of Lsi02G018340.1 vs. ExPASy Swiss-Prot
Match: P47979 (Zinc finger protein zfs1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=zfs1 PE=1 SV=1) HSP 1 Score: 54.7 bits (130), Expect = 2.3e-06 Identity = 27/55 (49.09%), Postives = 38/55 (69.09%), Query Frame = 0
BLAST of Lsi02G018340.1 vs. ExPASy Swiss-Prot
Match: Q07352 (mRNA decay activator protein ZFP36L1 OS=Homo sapiens OX=9606 GN=ZFP36L1 PE=1 SV=1) HSP 1 Score: 53.5 bits (127), Expect = 5.1e-06 Identity = 21/47 (44.68%), Postives = 35/47 (74.47%), Query Frame = 0
BLAST of Lsi02G018340.1 vs. ExPASy Swiss-Prot
Match: P23949 (mRNA decay activator protein ZFP36L2 OS=Mus musculus OX=10090 GN=Zfp36l2 PE=1 SV=2) HSP 1 Score: 52.8 bits (125), Expect = 8.8e-06 Identity = 37/138 (26.81%), Postives = 59/138 (42.75%), Query Frame = 0
BLAST of Lsi02G018340.1 vs. ExPASy TrEMBL
Match: A0A5D3C9H3 (Tristetraprolin-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold265G00710 PE=4 SV=1) HSP 1 Score: 490.0 bits (1260), Expect = 7.9e-135 Identity = 262/341 (76.83%), Postives = 281/341 (82.40%), Query Frame = 0
BLAST of Lsi02G018340.1 vs. ExPASy TrEMBL
Match: A0A6J1DKP7 (uncharacterized protein LOC111021811 OS=Momordica charantia OX=3673 GN=LOC111021811 PE=4 SV=1) HSP 1 Score: 431.8 bits (1109), Expect = 2.6e-117 Identity = 240/373 (64.34%), Postives = 269/373 (72.12%), Query Frame = 0
BLAST of Lsi02G018340.1 vs. ExPASy TrEMBL
Match: A0A0A0K529 (C3H1-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G103290 PE=4 SV=1) HSP 1 Score: 388.7 bits (997), Expect = 2.5e-104 Identity = 212/272 (77.94%), Postives = 225/272 (82.72%), Query Frame = 0
BLAST of Lsi02G018340.1 vs. ExPASy TrEMBL
Match: A0A6J1IEX1 (uncharacterized protein LOC111472616 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111472616 PE=4 SV=1) HSP 1 Score: 375.9 bits (964), Expect = 1.7e-100 Identity = 219/374 (58.56%), Postives = 246/374 (65.78%), Query Frame = 0
BLAST of Lsi02G018340.1 vs. ExPASy TrEMBL
Match: A0A6J1ICU5 (uncharacterized protein LOC111472626 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111472626 PE=4 SV=1) HSP 1 Score: 375.6 bits (963), Expect = 2.2e-100 Identity = 219/374 (58.56%), Postives = 246/374 (65.78%), Query Frame = 0
BLAST of Lsi02G018340.1 vs. NCBI nr
Match: XP_038897010.1 (uncharacterized protein LOC120085195 [Benincasa hispida] >XP_038897011.1 uncharacterized protein LOC120085195 [Benincasa hispida]) HSP 1 Score: 528.1 bits (1359), Expect = 5.4e-146 Identity = 271/328 (82.62%), Postives = 287/328 (87.50%), Query Frame = 0
BLAST of Lsi02G018340.1 vs. NCBI nr
Match: XP_004148935.1 (uncharacterized protein LOC101215865 [Cucumis sativus] >XP_011658933.1 uncharacterized protein LOC101215865 [Cucumis sativus] >XP_031744249.1 uncharacterized protein LOC116404958 [Cucumis sativus] >XP_031744250.1 uncharacterized protein LOC116404958 [Cucumis sativus] >KAE8645918.1 hypothetical protein Csa_011889 [Cucumis sativus]) HSP 1 Score: 495.4 bits (1274), Expect = 3.9e-136 Identity = 264/330 (80.00%), Postives = 279/330 (84.55%), Query Frame = 0
BLAST of Lsi02G018340.1 vs. NCBI nr
Match: TYK07952.1 (tristetraprolin-like isoform X2 [Cucumis melo var. makuwa]) HSP 1 Score: 490.0 bits (1260), Expect = 1.6e-134 Identity = 262/341 (76.83%), Postives = 281/341 (82.40%), Query Frame = 0
BLAST of Lsi02G018340.1 vs. NCBI nr
Match: XP_022154583.1 (uncharacterized protein LOC111021811 [Momordica charantia] >XP_022154584.1 uncharacterized protein LOC111021811 [Momordica charantia]) HSP 1 Score: 431.8 bits (1109), Expect = 5.3e-117 Identity = 240/373 (64.34%), Postives = 269/373 (72.12%), Query Frame = 0
BLAST of Lsi02G018340.1 vs. NCBI nr
Match: XP_023536031.1 (uncharacterized protein LOC111797287 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023536040.1 uncharacterized protein LOC111797287 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 378.6 bits (971), Expect = 5.3e-101 Identity = 221/374 (59.09%), Postives = 247/374 (66.04%), Query Frame = 0
BLAST of Lsi02G018340.1 vs. TAIR 10
Match: AT1G66810.1 (Zinc finger C-x8-C-x5-C-x3-H type family protein ) HSP 1 Score: 47.8 bits (112), Expect = 2.0e-05 Identity = 15/31 (48.39%), Postives = 25/31 (80.65%), Query Frame = 0
BLAST of Lsi02G018340.1 vs. TAIR 10
Match: AT1G68200.1 (Zinc finger C-x8-C-x5-C-x3-H type family protein ) HSP 1 Score: 47.4 bits (111), Expect = 2.6e-05 Identity = 15/31 (48.39%), Postives = 25/31 (80.65%), Query Frame = 0
BLAST of Lsi02G018340.1 vs. TAIR 10
Match: AT1G68200.2 (Zinc finger C-x8-C-x5-C-x3-H type family protein ) HSP 1 Score: 47.4 bits (111), Expect = 2.6e-05 Identity = 15/31 (48.39%), Postives = 25/31 (80.65%), Query Frame = 0
BLAST of Lsi02G018340.1 vs. TAIR 10
Match: AT1G32360.1 (Zinc finger (CCCH-type) family protein ) HSP 1 Score: 46.6 bits (109), Expect = 4.5e-05 Identity = 21/44 (47.73%), Postives = 28/44 (63.64%), Query Frame = 0
BLAST of Lsi02G018340.1 vs. TAIR 10
Match: AT1G01350.1 (Zinc finger (CCCH-type/C3HC4-type RING finger) family protein ) HSP 1 Score: 43.9 bits (102), Expect = 2.9e-04 Identity = 20/61 (32.79%), Postives = 34/61 (55.74%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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