Lsi02G018340 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi02G018340
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
DescriptionmRNA decay activator protein ZFP36L2-like isoform X2
Locationchr02: 24134558 .. 24139844 (-)
RNA-Seq ExpressionLsi02G018340
SyntenyLsi02G018340
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTATATGTAAGTTCATTTGGTTTTGAGTTATGGTTGTTCAGTAATGTTGTTCCTACTCCACTCCCAAACTCCGAATTCATGAATTCATGCTCATTTTCCGTCCAAGGAAGAAATGTAACTCTTCATTTCTCTCTCTCAAATCGGAGTCTCTCAACGGCGGATTGAATCGTTGGCTCCATACAATCTGTAGGTTCCAAGTGTTGAAGAACGCGTTGTCGACGTCGTTACCTCCATGATCAACAATCAGTGTTGCAATTAAGAGGTAACTACTTTTGTTTTCATGCTCTCGCTTCTTCGTATATTGTATAGCAGCTCCTGTTAAATCTCTATTCTTACGCTTTCTTTTATCTTAATCGCTGATTTTGACGAAATCATGCTCTACTACATTATCTATTTTGCATCTAAACTTCGATTGAAGAAAGTTTGTTGCTTGTATCTTTATCAGCTTTTCGTCCGTCTTTCTTAGACTATCGCTTCAAGCCTTCTCTTACACCTCTATCTCAGTCCAGGCTCTATCAAAACAAAAATGTCGTTCCATATCGGTAAGATTGCAAGCTTCATTTCCTTGATTTAATCCTCTTTCAATACCTCGTTTTATCTTGTTTATGACTTATGTACGCCAACTGTTTGAGTAAATTTCATAATGGAAAAATAGGAAAATATTAGGAGAAATACAGAGGAAGAAAGCTCAGTTGTTTTATTATTGTGATTGAAAAGCTATGCTACTTTTAAGTAGAGAATGTATTGAGTTGAAGACACTTTGCTATAGGGAACATGAACAACTACCACGTTGAAAATATTATCAAATGCATATGATTTTTTTATTTTTTATTTTCAAAATAGACAGCATGAATACAAATTAGGGTAATATCGCTGCCTTGGACTCTCAATACTTTGTAATATTGATTGTTGTTTTTTTTTTAATACTTTTTTTTGTTTAAGGCAAGTTAGCCTTGTTATTTTGTAAATTTGTTAGGCCAATAGATACTGTAGAGCAATACCTTTGGATGGTGTGTATACTGTTTGTAACTTAAATCCATAGATCAAAGAATGATTTAACAGATTTCGAACTTTTAACAAAATTGTTTGAATAGTTTGGTGAAGTGGAAGATTCAATTTCAATCATAGCACCTGAAGGTGTTTTTGCTCTCTCTTTTTTCTTAGAAGATTTGCTTTTCTTTTTTGATTTAAGCCAAATATGAGATTTTGTGCTATTAAATAGTGAACTTTGGTTTTGAATAGGATGGACATGTTGTTTTGTTTTTAAATATAGGAGAACATGTTATCTTTTGGTTAATTTCAACCATCCTCTTTCCACTTAATTGATTTTAGTTTCTAACTTTTAACTTGTTTAAAGTTGAAACTAATTTTACAACTGTTTTATAGATTTTGTAGAATGTAGGTTGTAGAATGTCATTTTGAATTTTGTACCTTGATGCTTACATTTGCACTTTCAATCACCGCAGGCTTTTGGCTTCACTCATTTCATCTTCGTGAGGTCTAGTGTCTCTGGACTATGGTTTGTTTGCTCCTCAGAAGGTTCATAAAACTAATTTCTAGTTTCTTGGATTGTTGCTAGTTACTTTTCTGATTGGCTTTAAGGTTTCTCTCGATATTAAATTTTATTTCCTTTTTTTGTTGAGAATCTATGAGACCGACCTTGTTTTATCTCTTTAATTGTAATTTTTTTAAGGTTTTAATTATAGCATCTGTAGTAATTCATATATTTATTCTTTACAGGTAGAGGAGAAGCTGAAAGACTAGGAAAGGAGAAAACATTTGCATTCTACATCGAAGCTCAAGGTTAATAAAACTATACTTGGATTATTGTCTGGGAAATTAGATTTTTTTTTTTTTTTTTTTTTTTTGGATTCATTTTCTAAATGTGATATGATTTTGGGAACATTTGAATTATGTTCTTCGTACTCTATTTAGACTTAGGAATAATGACTTTGAGTATGAATAAATTTAGGTTAAATTATAATTTCAGTCTTGAACTTTATCTGTATGATTTGGATCAAGATTTGAGGCTTTATGTACAGTTTTTTAGTGGCTCGAGAGTTTTGTATGTTGTATTGCAAAGCCTTTGTGGCAATTAATTATTATTTATTTATAAGGTTTGATTTGATCTTTTTGGTTTAGACATAGTTTTGATTTGGTCGATATAGTTTAATGTGAGGGAGAGATGGGAACTTGAAGGATTTTAGTTTTTTTTTTTCTGTTTATAAGCAATAGTGATACACTTTGCATTCTGGTTGTTGTTGTAGCTCTTTGAACCCACTTTGCATTTAGGTTGCATGTTTCTTTTCTCTTCTCCATTTTACATCTCAATCTTTTGTTCGTATTCATCATTCATCATCTCCATAAACTTAATTCACCAAATTCTGTGGAGAGTACTGGATCATGATTTGCTACAATCGATAAATCTCTATTTTGTACTAGGGAGATCAACCTATAAATTAATACATAGCCGATGAAAACATCTAAATGCTGATAGATTTTCTTCTCTGCGCATCAATTGTTATTAGTAAGTTTATCATTTTAACTCGGAGATTTCAGGTTCTTTTCCTGAATCATGGAAGATCATCAAGGAAAGAGGAGCTCCAAAACATCCATTATCAAAGGCCTAAACGCTTCGGTTCGGCCGATCAACATTCAAATGGACAATCACTTGGTAATTGGGGGAACTAGACACTATCACCAGGAAACAAACTGTAAAAGTCCGACGATCTTCGATCGTTACACCATTATGAATCACTATGCTAGCAGCACTCCTGGAAGCAATAGCTTCGGTCCTCGGGGAACAGGATCGCCATTGTCACCACTTTCGGCTATCGAGAATTTGGAAACACCACGTATAAGGTCTCCACAAATTTATGGAACTCCAGTGAAGGTTGATGAAGAAGTGATAGTAATGGATGGGATTTTGATCAATTCGATTCCTGGTGGAGCGAAGACAGTGAGGTCTCCTTTAGATTCTGGAAGTGGTGGAGGTTTGTTGTCAGGCAAAAATCAATACAGAACAGACATTTGCCGCTACTGGGAGGATTCTGGAAGCTGCCGCTTCGGCCACAAATGCCAGGTTAGTTATTTTGTCCCCACTGTAAGGATCTGATCTCAATTATTGCCTCTGCAAATTTATTGGCCACAATGCAGTATCTTTGTTTATTACTTAAAAGACACCTTACCCCTGTGTCTTGAGGTTTGATTGCTAATAAGAGAAATGGATAAAAAAGATATTTTCAAAGAATAGTCTGATTAAAGATTAGTCGTTCCTGTTCAGGTTTAATTGGTGAGCTTTTGGACTGAATTATTTATTTATCATTTAATGTGGGTTAATTTTCCATTTATTCTTGTTTCGTGTGGGTAGACTGAATTTATTTTTTATAGAATAACTTGATTGAAATAAATTGATGCATTAAGAGAGAGGTACAGGATGAATCAATGTCTCTTAGCCAAGGTTTTTTGAGAAAGCTCAGATGGTGATTCAAGGATTGAATATATGTATCCCACTCCCAATTTTGTTTAAAATTTGGTCTCAGATAATGAACTCAGTTCTAATGTGTTAATAGATAGAGTGAAACAGTAGGTTGGCTGCCAAAATTGGTGCAGTTATGTATTATCACACCAAGTTAGTAGATTAGCAGATAATTGAACCTAACCTTTTTCAAAAGTTGGATTAACCATAGACTTCAGCAAGAGCCCGACATTCCCTTTCAGTGGTTGGATTGAGTACCAACATTGAGTTTATTAGAGCATCATTATACATGACACGAATTCAAAGCTAAAGATAACACAACACTACTAACTTCCAGTATCTATCAATCAACGACATCCTGTGCTCTTGATTTCAATAGTGGATATATTATTCAACTTCTTGGGTAATATAATTCAGTCATGGGGGACGGGGACTTGGGATTGGATCCTCCTATTTAATACTTTTAAATAATTTGGTTGGCTGACTTTATTCCAAGAATAGGATCAAAAGCTTGAATTTCTCAATTTTTTTTAATGATCTATATGTAAGCTAAAAATTATAAACCTAATAGAATTTGAGTCCATTGATCTAAAATGTAAGTAATTAAAATATTTTGTTTAGTTACTCATTTCGTTATCCATTCACCGAAAGTTTGGGCTCCTTCATAATTCTTATGTAATTGTATTTGTCTTCATTATGGTATAAATAGAGAAAAAATTAGTTTATATTTAGAACCTCATAGCTAGACACTACGTAAAACTATCATTAAACTCAAAAGTATAGCATTATAGATTAAATTGCGATGTACATGTCAGAGCATGCTTAATCTTTTCTAATAATATTCTCAATCATACATGTTGAAATTAATGGGAAATAGTTTGATTTGCATACAGTAGTTGATATGGTATTTCAGAATTGTATTTTCTGTTTGCAGTTTGCACATGGAAAGGAGGACCTTCGGCCAGGTCGTTTACCGGTTAGAACCAAGCCTAAGGTACCATTGACATCTGATAAATTAAATATACTGCAGGTTTTGTTCGGATAAAAGACACTTTTAGATTTGTATATTCTTCGGTACTACAGTTCAACGAAGCGTATGGTTCCAAGTTTCGCAACAATCATTTACAAACAGGAATAGCTGCAACAACAACACAATCAAACTCAGTAGATACAATCACCAAAACTGAAATTAGCAAAAGAGAGGGTCTTGGTACAACATCCTCAGCTTCAATACGCCACATGAACACGAACACGAAGCCAAGCCTTATTTCCACCATTTCCATCATTGATTGGTCACCTGAAGATGATGGCATTAAAATTGCTGTCCCGGAAACAGAGTCGACAAAAAGAGAAGATGTAGACCAACACATCCATGGAGTTCTTTATGGTTCCACCACTGAGAGGACCAAAACAAGATTACCAGTTTTCACTCAACTCTGCTCTGAAAAACTCCAACAAGAATAGGTACGCCAAGCTTTTTCCCATCATCAAATTGCAAATGATTCTCTTAAAATCTACTCTAATTGGTTACACCATTTTTTTTTAAACACTCAGTCAGCTTTGAAATAGGAGCTTTCATGGGTCATATTAGTACTTACTCATCAGTCATAAAGAAGGATTATGTTAGAAGAAATTAAGTAATAAGGAAAAAAGTTTTTCATTACTTTGTTGTAGCTGTATGTACAATGAGCAAAACAATGATCCAAGTTGTACATCACTATATCGTTTGCATGAGGCTCTGATGATATTGATGGTAAATTCTAATTCTGAAAAAAAAATGATGAACAGAAATATTATAGATTTATATG

mRNA sequence

ATTATATGTAAGTTCATTTGGTTTTGAGTTATGGTTGTTCAGTAATGTTGTTCCTACTCCACTCCCAAACTCCGAATTCATGAATTCATGCTCATTTTCCGTCCAAGGAAGAAATGTAACTCTTCATTTCTCTCTCTCAAATCGGAGTCTCTCAACGGCGGATTGAATCGTTGGCTCCATACAATCTGTAGGTTCCAAGTGTTGAAGAACGCGTTGTCGACGTCGTTACCTCCATGATCAACAATCAGTGTTGCAATTAAGAGCTTTTCGTCCGTCTTTCTTAGACTATCGCTTCAAGCCTTCTCTTACACCTCTATCTCAGTCCAGGCTCTATCAAAACAAAAATGTCGTTCCATATCGGCTTTTGGCTTCACTCATTTCATCTTCGTGAGGTCTAGTGTCTCTGGACTATGGTTTGTTTGCTCCTCAGAAGGTAGAGGAGAAGCTGAAAGACTAGGAAAGGAGAAAACATTTGCATTCTACATCGAAGCTCAAGGTTCTTTTCCTGAATCATGGAAGATCATCAAGGAAAGAGGAGCTCCAAAACATCCATTATCAAAGGCCTAAACGCTTCGGTTCGGCCGATCAACATTCAAATGGACAATCACTTGGTAATTGGGGGAACTAGACACTATCACCAGGAAACAAACTGTAAAAGTCCGACGATCTTCGATCGTTACACCATTATGAATCACTATGCTAGCAGCACTCCTGGAAGCAATAGCTTCGGTCCTCGGGGAACAGGATCGCCATTGTCACCACTTTCGGCTATCGAGAATTTGGAAACACCACGTATAAGGTCTCCACAAATTTATGGAACTCCAGTGAAGGTTGATGAAGAAGTGATAGTAATGGATGGGATTTTGATCAATTCGATTCCTGGTGGAGCGAAGACAGTGAGGTCTCCTTTAGATTCTGGAAGTGGTGGAGGTTTGTTGTCAGGCAAAAATCAATACAGAACAGACATTTGCCGCTACTGGGAGGATTCTGGAAGCTGCCGCTTCGGCCACAAATGCCAGTTTGCACATGGAAAGGAGGACCTTCGGCCAGGTCGTTTACCGGTTAGAACCAAGCCTAAGGTACCATTGACATCTGATAAATTAAATATACTGCAGTTCAACGAAGCGTATGGTTCCAAGTTTCGCAACAATCATTTACAAACAGGAATAGCTGCAACAACAACACAATCAAACTCAGTAGATACAATCACCAAAACTGAAATTAGCAAAAGAGAGGGTCTTGGTACAACATCCTCAGCTTCAATACGCCACATGAACACGAACACGAAGCCAAGCCTTATTTCCACCATTTCCATCATTGATTGGTCACCTGAAGATGATGGCATTAAAATTGCTGTCCCGGAAACAGAGTCGACAAAAAGAGAAGATGTAGACCAACACATCCATGGAGTTCTTTATGGTTCCACCACTGAGAGGACCAAAACAAGATTACCAGTTTTCACTCAACTCTGCTCTGAAAAACTCCAACAAGAATAGGTACGCCAAGCTTTTTCCCATCATCAAATTGCAAATGATTCTCTTAAAATCTACTCTAATTGGTTACACCATTTTTTTTTAAACACTCAGTCAGCTTTGAAATAGGAGCTTTCATGGGTCATATTAGTACTTACTCATCAGTCATAAAGAAGGATTATGTTAGAAGAAATTAAGTAATAAGGAAAAAAGTTTTTCATTACTTTGTTGTAGCTGTATGTACAATGAGCAAAACAATGATCCAAGTTGTACATCACTATATCGTTTGCATGAGGCTCTGATGATATTGATGGTAAATTCTAATTCTGAAAAAAAAATGATGAACAGAAATATTATAGATTTATATG

Coding sequence (CDS)

ATGGAAGATCATCAAGGAAAGAGGAGCTCCAAAACATCCATTATCAAAGGCCTAAACGCTTCGGTTCGGCCGATCAACATTCAAATGGACAATCACTTGGTAATTGGGGGAACTAGACACTATCACCAGGAAACAAACTGTAAAAGTCCGACGATCTTCGATCGTTACACCATTATGAATCACTATGCTAGCAGCACTCCTGGAAGCAATAGCTTCGGTCCTCGGGGAACAGGATCGCCATTGTCACCACTTTCGGCTATCGAGAATTTGGAAACACCACGTATAAGGTCTCCACAAATTTATGGAACTCCAGTGAAGGTTGATGAAGAAGTGATAGTAATGGATGGGATTTTGATCAATTCGATTCCTGGTGGAGCGAAGACAGTGAGGTCTCCTTTAGATTCTGGAAGTGGTGGAGGTTTGTTGTCAGGCAAAAATCAATACAGAACAGACATTTGCCGCTACTGGGAGGATTCTGGAAGCTGCCGCTTCGGCCACAAATGCCAGTTTGCACATGGAAAGGAGGACCTTCGGCCAGGTCGTTTACCGGTTAGAACCAAGCCTAAGGTACCATTGACATCTGATAAATTAAATATACTGCAGTTCAACGAAGCGTATGGTTCCAAGTTTCGCAACAATCATTTACAAACAGGAATAGCTGCAACAACAACACAATCAAACTCAGTAGATACAATCACCAAAACTGAAATTAGCAAAAGAGAGGGTCTTGGTACAACATCCTCAGCTTCAATACGCCACATGAACACGAACACGAAGCCAAGCCTTATTTCCACCATTTCCATCATTGATTGGTCACCTGAAGATGATGGCATTAAAATTGCTGTCCCGGAAACAGAGTCGACAAAAAGAGAAGATGTAGACCAACACATCCATGGAGTTCTTTATGGTTCCACCACTGAGAGGACCAAAACAAGATTACCAGTTTTCACTCAACTCTGCTCTGAAAAACTCCAACAAGAATAG

Protein sequence

MEDHQGKRSSKTSIIKGLNASVRPINIQMDNHLVIGGTRHYHQETNCKSPTIFDRYTIMNHYASSTPGSNSFGPRGTGSPLSPLSAIENLETPRIRSPQIYGTPVKVDEEVIVMDGILINSIPGGAKTVRSPLDSGSGGGLLSGKNQYRTDICRYWEDSGSCRFGHKCQFAHGKEDLRPGRLPVRTKPKVPLTSDKLNILQFNEAYGSKFRNNHLQTGIAATTTQSNSVDTITKTEISKREGLGTTSSASIRHMNTNTKPSLISTISIIDWSPEDDGIKIAVPETESTKREDVDQHIHGVLYGSTTERTKTRLPVFTQLCSEKLQQE
Homology
BLAST of Lsi02G018340 vs. ExPASy Swiss-Prot
Match: Q5ISE2 (mRNA decay activator protein ZFP36L3 OS=Mus musculus OX=10090 GN=Zfp36l3 PE=1 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 3.6e-07
Identity = 22/42 (52.38%), Postives = 32/42 (76.19%), Query Frame = 0

Query: 137 SGGGLLSGKNQYRTDICRYWEDSGSCRFGHKCQFAHGKEDLR 179
           SG   L+   +Y+T++CR +E+SG C++GHKCQFAHG  +LR
Sbjct: 112 SGSSSLATSERYKTELCRPFEESGICKYGHKCQFAHGYRELR 153

BLAST of Lsi02G018340 vs. ExPASy Swiss-Prot
Match: P47974 (mRNA decay activator protein ZFP36L2 OS=Homo sapiens OX=9606 GN=ZFP36L2 PE=1 SV=3)

HSP 1 Score: 55.5 bits (132), Expect = 1.4e-06
Identity = 21/41 (51.22%), Postives = 31/41 (75.61%), Query Frame = 0

Query: 138 GGGLLSGKNQYRTDICRYWEDSGSCRFGHKCQFAHGKEDLR 179
           GGG      +Y+T++CR +E+SG+C++G KCQFAHG  +LR
Sbjct: 144 GGGSQINSTRYKTELCRPFEESGTCKYGEKCQFAHGFHELR 184

BLAST of Lsi02G018340 vs. ExPASy Swiss-Prot
Match: P47979 (Zinc finger protein zfs1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=zfs1 PE=1 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 2.3e-06
Identity = 27/55 (49.09%), Postives = 38/55 (69.09%), Query Frame = 0

Query: 132 PLDSGSGGGLL-SGKNQ-YRTDICRYWEDSGSCRFGHKCQFAHGKEDLR-PGRLP 184
           P  SGS  G+  +GK   Y+T+ C+ W+ SG+CR+G KCQFAHG ++L+ P R P
Sbjct: 309 PHGSGSSNGVAPNGKRALYKTEPCKNWQISGTCRYGSKCQFAHGNQELKEPPRHP 363

BLAST of Lsi02G018340 vs. ExPASy Swiss-Prot
Match: Q07352 (mRNA decay activator protein ZFP36L1 OS=Homo sapiens OX=9606 GN=ZFP36L1 PE=1 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 5.1e-06
Identity = 21/47 (44.68%), Postives = 35/47 (74.47%), Query Frame = 0

Query: 132 PLDSGSGGGLLSGKNQYRTDICRYWEDSGSCRFGHKCQFAHGKEDLR 179
           P     GGG ++  ++Y+T++CR +E++G+C++G KCQFAHG  +LR
Sbjct: 100 PTQKQPGGGQVN-SSRYKTELCRPFEENGACKYGDKCQFAHGIHELR 145

BLAST of Lsi02G018340 vs. ExPASy Swiss-Prot
Match: P23949 (mRNA decay activator protein ZFP36L2 OS=Mus musculus OX=10090 GN=Zfp36l2 PE=1 SV=2)

HSP 1 Score: 52.8 bits (125), Expect = 8.8e-06
Identity = 37/138 (26.81%), Postives = 59/138 (42.75%), Query Frame = 0

Query: 49  SPTIFDRYTIMNHYASS----TPGSNS----FGPRGTGSPLSPLSAIENLETPRIRSPQI 108
           +P    R++  N +A +    +PGS S      P G GS   P          +++ P  
Sbjct: 49  TPGFLRRHSASNLHALAHPVPSPGSCSPKFPGAPNGGGSSCGPAGGGGLASYGQLKEPSG 108

Query: 109 YGTPVKVDEEVIVMDGILINSIPGGAKTVRSPLDSGSGGGLLSGKNQYRTDICRYWEDSG 168
                 V +E    D     +       +        G G      +Y+T++CR +E+SG
Sbjct: 109 GSGTALVTKESKFRDRSFSENGERSQHLLHLQQQQKGGSGSQINSTRYKTELCRPFEESG 168

Query: 169 SCRFGHKCQFAHGKEDLR 179
           +C++G KCQFAHG  +LR
Sbjct: 169 TCKYGEKCQFAHGFHELR 186

BLAST of Lsi02G018340 vs. ExPASy TrEMBL
Match: A0A5D3C9H3 (Tristetraprolin-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold265G00710 PE=4 SV=1)

HSP 1 Score: 490.0 bits (1260), Expect = 7.9e-135
Identity = 262/341 (76.83%), Postives = 281/341 (82.40%), Query Frame = 0

Query: 1   MEDHQGKRSSKTSIIKGLNASVRPINIQMDNHLVIGGTRHYHQETNCKSPTIFDRYTIMN 60
           MED Q KRSS+TSIIKGLNAS+RP+NIQMDNHLVIGGTRHYHQETNCKSPTI D Y IMN
Sbjct: 1   MEDRQSKRSSRTSIIKGLNASIRPMNIQMDNHLVIGGTRHYHQETNCKSPTIVDCYNIMN 60

Query: 61  HYASSTPGSNSFGPRGTGSPLSPLSAIENLETPRIRSPQIYGTPVKVDEEVIVMDGILIN 120
           HYASST GSNSFG RG G  LSPLSAIENLETP ++SPQIYGTP+KVDEEVIVMDGILI+
Sbjct: 61  HYASSTSGSNSFGSRGAGLSLSPLSAIENLETPPVKSPQIYGTPMKVDEEVIVMDGILIS 120

Query: 121 SIPGGAKTVRSPLDSGSGGGLLSGKNQYRTDICRYWEDSGSCRFGHKCQFAHGKEDLRPG 180
           SI G AKTVRSPLDSGSGGG   GKNQYR+DICRYWEDSGSCRFG+KCQFAHGKEDLRPG
Sbjct: 121 SIHGEAKTVRSPLDSGSGGG---GKNQYRSDICRYWEDSGSCRFGNKCQFAHGKEDLRPG 180

Query: 181 RLPVRTKPKVPLTSDKLNILQFNEAYGSKFRNNHLQTGIAATTT---QSNSVDTITKTEI 240
           RLPVRTK K            F+E YGSKFRNNH  +GI+ATTT    SN VDTITKTE+
Sbjct: 181 RLPVRTKTK------------FSETYGSKFRNNHSLSGISATTTTQSNSNLVDTITKTEL 240

Query: 241 SKREGLGTTSSASIRHMNTNTKPSLISTISII-----------DWSPEDDGIKIAVPETE 300
           SKREGL  TSS+  R   TNT P+LISTISII           DWSPEDDGIKI VP TE
Sbjct: 241 SKREGLTPTSSSLKR--QTNTNPTLISTISIIDWSPEDDDGIKDWSPEDDGIKIVVPGTE 300

Query: 301 STKREDVDQHIHGVLYGSTTERTKTRLPVFTQLCSEKLQQE 328
           STKREDV+QHIH VLYGSTTERTK RLPVF+QLCSE+LQ+E
Sbjct: 301 STKREDVNQHIHEVLYGSTTERTKKRLPVFSQLCSEELQEE 324

BLAST of Lsi02G018340 vs. ExPASy TrEMBL
Match: A0A6J1DKP7 (uncharacterized protein LOC111021811 OS=Momordica charantia OX=3673 GN=LOC111021811 PE=4 SV=1)

HSP 1 Score: 431.8 bits (1109), Expect = 2.6e-117
Identity = 240/373 (64.34%), Postives = 269/373 (72.12%), Query Frame = 0

Query: 1   MEDHQGKRSSKTSIIKGLNASVRPINIQMDNHLVIGGTRHYHQETNCKSPTIFDRYT--- 60
           ME  QGKRSSKTSIIKGLN +V PINIQMDNHLVIGGT HYHQETNCKSPT+ DRY+   
Sbjct: 1   MEGRQGKRSSKTSIIKGLNVTVPPINIQMDNHLVIGGTGHYHQETNCKSPTMLDRYSEKL 60

Query: 61  ------------------------------------------IMNHYASSTPGSNSFGPR 120
                                                     IMNHYASST  S+SFG R
Sbjct: 61  DRSTSIVRYFRSRSPVIGKLPSVGDTFSTPVPDVINANYRSAIMNHYASSTSRSSSFGSR 120

Query: 121 GTGSPLSPLSAIENLETPRIRSPQIYGTPVKVDEEVIVMDGILINSIPGGAKTVRSPLDS 180
           G GS LSPLSAIENLETP  RSPQIYGTPVKVDEEVIVMDGILI+S+PGGAKT+RS  +S
Sbjct: 121 GGGSSLSPLSAIENLETPTARSPQIYGTPVKVDEEVIVMDGILISSVPGGAKTMRSASES 180

Query: 181 GSGGGLLSGKNQYRTDICRYWEDSGSCRFGHKCQFAHGKEDLRPGRLPVRTKPKVPLTSD 240
            +GGG LSGKN YRTDICR WEDSGSCR+GHKCQFAHGKE+LRP RLPV+ KPKV   SD
Sbjct: 181 VTGGGSLSGKNLYRTDICRSWEDSGSCRYGHKCQFAHGKEELRPARLPVKNKPKV---SD 240

Query: 241 KLNILQFNEAYG-SKFRNNHLQTGIAATTTQSNSVDTITKTEISKREGLGTTSSASIRHM 300
                 +   YG SKF ++H    +A TT+ S  +DTI  +E+S+ EG     + SIRHM
Sbjct: 241 -----SYCTTYGHSKFCDSH---ALAVTTSHSYVIDTINNSEVSRSEG---GKTMSIRHM 300

Query: 301 NTNTKPSLISTISIIDWSPEDDGIKIAVPETESTKREDVDQHIHGVLYGSTTERTKTRLP 328
             NTKPSLISTISI+DWSPEDDGIKI +P ++STKREDV+Q+IH VLYGST ERTK RLP
Sbjct: 301 --NTKPSLISTISIVDWSPEDDGIKIVLPNSKSTKREDVNQYIHEVLYGSTNERTKKRLP 357

BLAST of Lsi02G018340 vs. ExPASy TrEMBL
Match: A0A0A0K529 (C3H1-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G103290 PE=4 SV=1)

HSP 1 Score: 388.7 bits (997), Expect = 2.5e-104
Identity = 212/272 (77.94%), Postives = 225/272 (82.72%), Query Frame = 0

Query: 59  MNHYASSTPGSNSFGPRGTGSPLSPLSAIENLETPRIRSPQIYGTPVKVDEEVIVMDGIL 118
           MNHYASST GSNSFG RG G  LSPLSAIENLETP IRSPQIYGTP+KVDEEVIVMDGIL
Sbjct: 1   MNHYASSTSGSNSFGSRGAGLSLSPLSAIENLETPPIRSPQIYGTPMKVDEEVIVMDGIL 60

Query: 119 INSIPGGAKTVRSPLDSGSGGGLLSGKNQYRTDICRYWEDSGSCRFGHKCQFAHGKEDLR 178
           I+SI G AKTVRSPLDSGSGGG   GKNQYR+DICRYWEDSG+CRFG+KCQFAHGKEDLR
Sbjct: 61  ISSIHGEAKTVRSPLDSGSGGG---GKNQYRSDICRYWEDSGTCRFGNKCQFAHGKEDLR 120

Query: 179 PGRLPVRTKPKVPLTSDKLNILQFNEAYGSKFRNNHLQTGIAATTT---QSNSVDTITKT 238
           PGRLPVRTK K            F+E YGSKFRNNH  TGIAATTT    SN VDTITKT
Sbjct: 121 PGRLPVRTKTK------------FSETYGSKFRNNHSLTGIAATTTTQSNSNLVDTITKT 180

Query: 239 EISKREGLGTTSSASIRHMNTNTKPSLISTISIIDWSPEDDGIKIAVPETESTKREDVDQ 298
           E+SKR GL  TSS    H  TN  P+LISTISII+WSPEDDGIKIAVP TESTKREDV+Q
Sbjct: 181 ELSKR-GLTPTSSTLKGH--TNNNPTLISTISIINWSPEDDGIKIAVPGTESTKREDVNQ 240

Query: 299 HIHGVLYGSTTERTKTRLPVFTQLCSEKLQQE 328
           HIH VLYGSTTERTK RLPVF Q+CSE+LQ+E
Sbjct: 241 HIHEVLYGSTTERTKKRLPVFVQICSEELQEE 254

BLAST of Lsi02G018340 vs. ExPASy TrEMBL
Match: A0A6J1IEX1 (uncharacterized protein LOC111472616 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111472616 PE=4 SV=1)

HSP 1 Score: 375.9 bits (964), Expect = 1.7e-100
Identity = 219/374 (58.56%), Postives = 246/374 (65.78%), Query Frame = 0

Query: 1   MEDHQGKRSSKTSIIKGLNASVRPINIQMDNHLVIGGTRHYHQETNCKSPTIFDRY---- 60
           MED QGKRSSK SIIKGLN +VRPI IQMDNHLVIGGT HYHQETN K PTI DRY    
Sbjct: 1   MEDRQGKRSSKASIIKGLNPTVRPIKIQMDNHLVIGGTGHYHQETNSKIPTILDRYAEKH 60

Query: 61  -----------------------------------------TIMNHYASSTPGSNSFGPR 120
                                                    +I+NH+ASST GS+SFG R
Sbjct: 61  DRSTPIVSYFRSRSPVVGKLPSAGDTFSTPVADVINASYRSSIINHFASSTSGSSSFGSR 120

Query: 121 GTGSPLSPLSAIENLETPRIRSPQIYGTPVKVDEEVIVMDGILINSIPGGAKTVRSPLDS 180
             GS LSPLSA+ENLET  +RSPQIYGTP+KV EEVIVMD ILI+S+ GGAKT++S LDS
Sbjct: 121 RGGSSLSPLSALENLETTPVRSPQIYGTPLKVHEEVIVMDEILISSVHGGAKTLKSALDS 180

Query: 181 GSGGGLLSGKNQYRTDICRYWEDSGSCRFGHKCQFAHGKEDLRPGRLPVRTKPKVPLTSD 240
           GSGGG    KNQYRTDICR WEDSGSCRFGHKCQFAHGKE+LRP  LPV+TKPK      
Sbjct: 181 GSGGGSSLSKNQYRTDICRSWEDSGSCRFGHKCQFAHGKEELRPVHLPVKTKPK------ 240

Query: 241 KLNILQFNEAY---GSKFRNNHLQTGIAATTTQSNSVDTITKTEISKREGLGTTSSASIR 300
                 F E Y   G K RNNH  TGIAA TTQSNS+    KTE+++R      S  SI 
Sbjct: 241 ------FGEPYLTHGLKSRNNHSLTGIAA-TTQSNSLYATFKTELNRR----GHSINSIH 300

Query: 301 HMNTNTKPSLISTISIIDWSPEDDGIKIAVPETESTKREDVDQHIHGVLYGSTTERTKTR 327
           ++NT             DWSP+DDGI++ VPET+ST R DVDQHI  VLYGSTTER K R
Sbjct: 301 NLNT-------------DWSPDDDGIEVVVPETKST-RGDVDQHILEVLYGSTTERAKKR 343

BLAST of Lsi02G018340 vs. ExPASy TrEMBL
Match: A0A6J1ICU5 (uncharacterized protein LOC111472626 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111472626 PE=4 SV=1)

HSP 1 Score: 375.6 bits (963), Expect = 2.2e-100
Identity = 219/374 (58.56%), Postives = 246/374 (65.78%), Query Frame = 0

Query: 1   MEDHQGKRSSKTSIIKGLNASVRPINIQMDNHLVIGGTRHYHQETNCKSPTIFDRY---- 60
           MED QGKRSSK SIIKGLN +VRPI IQMDNHLVIGGT HYHQETN K PTI DRY    
Sbjct: 1   MEDRQGKRSSKPSIIKGLNPTVRPIKIQMDNHLVIGGTGHYHQETNSKIPTILDRYAEKH 60

Query: 61  -----------------------------------------TIMNHYASSTPGSNSFGPR 120
                                                    +I+NH+ASST GS+SFG R
Sbjct: 61  DRSTPIVSYFRSRSPVVGKLPSAGDTCSTPVADVINASYRSSIINHFASSTSGSSSFGSR 120

Query: 121 GTGSPLSPLSAIENLETPRIRSPQIYGTPVKVDEEVIVMDGILINSIPGGAKTVRSPLDS 180
             GS LSPLSA+ENLET  +RSPQIYGTP+KV EEVIVMD ILI+S+ GGAKT++S LDS
Sbjct: 121 RGGSSLSPLSALENLETTPVRSPQIYGTPLKVHEEVIVMDEILISSVHGGAKTLKSALDS 180

Query: 181 GSGGGLLSGKNQYRTDICRYWEDSGSCRFGHKCQFAHGKEDLRPGRLPVRTKPKVPLTSD 240
           GSGGG    KNQYRTDICR WEDSGSCRFGHKCQFAHGKE+LRP  LPV+TKPK      
Sbjct: 181 GSGGGSSLSKNQYRTDICRSWEDSGSCRFGHKCQFAHGKEELRPVHLPVKTKPK------ 240

Query: 241 KLNILQFNEAY---GSKFRNNHLQTGIAATTTQSNSVDTITKTEISKREGLGTTSSASIR 300
                 F E Y   G K RNNH  TGIAA TTQSNS+    KTE+++R      S  SI 
Sbjct: 241 ------FGEPYLTHGLKSRNNHSLTGIAA-TTQSNSLYATFKTELNRR----GHSINSIH 300

Query: 301 HMNTNTKPSLISTISIIDWSPEDDGIKIAVPETESTKREDVDQHIHGVLYGSTTERTKTR 327
           ++NT             DWSP+DDGI++ VPET+ST R DVDQHI  VLYGSTTER K R
Sbjct: 301 NLNT-------------DWSPDDDGIEVVVPETKST-RGDVDQHILEVLYGSTTERAKKR 343

BLAST of Lsi02G018340 vs. NCBI nr
Match: XP_038897010.1 (uncharacterized protein LOC120085195 [Benincasa hispida] >XP_038897011.1 uncharacterized protein LOC120085195 [Benincasa hispida])

HSP 1 Score: 528.1 bits (1359), Expect = 5.4e-146
Identity = 271/328 (82.62%), Postives = 287/328 (87.50%), Query Frame = 0

Query: 1   MEDHQGKRSSKTSIIKGLNASVRPINIQMDNHLVIGGTRHYHQETNCKSPTIFDRYTIMN 60
           MED QGKRS+KTSIIKGLNASVRPINIQMDNHLVIGGTRHYHQETNC+SPTI DRYTIMN
Sbjct: 1   MEDRQGKRSTKTSIIKGLNASVRPINIQMDNHLVIGGTRHYHQETNCRSPTIVDRYTIMN 60

Query: 61  HYASSTPGSNSFGPRGTGSPLSPLSAIENLETPRIRSPQIYGTPVKVDEEVIVMDGILIN 120
           HYASST G NSFG RG GSPLSPLSAIENLETP +RSPQIYGTPVKVDEEVIVMDGILI+
Sbjct: 61  HYASSTSGCNSFGSRGAGSPLSPLSAIENLETPPVRSPQIYGTPVKVDEEVIVMDGILIS 120

Query: 121 SIPGGAKTVRSPLDSGSGGGLLSGKNQYRTDICRYWEDSGSCRFGHKCQFAHGKEDLRPG 180
           SIPGGAKT+RSPLDSGSGGG  S KNQYRTDICRYWEDSGSCRFGHKCQFAHGKEDLRP 
Sbjct: 121 SIPGGAKTMRSPLDSGSGGGFSSAKNQYRTDICRYWEDSGSCRFGHKCQFAHGKEDLRPS 180

Query: 181 RLPVRTKPKVPLTSDKLNILQFNEAYGSKFRNNHLQTGIAATTTQSNSVDTITKTEISKR 240
           R+PVRTKPK            F+E YG KFRN+H  TGIAA TT SN +DT  KTE+S+R
Sbjct: 181 RIPVRTKPK------------FSETYGPKFRNSHSLTGIAA-TTHSNLIDTFNKTELSRR 240

Query: 241 EGL-GTTSSASIRHMNTNTKPSLISTISIIDWSPEDDGIKIAVPETESTKREDVDQHIHG 300
           E L  TTSS S+RHM  NTKPSLI TISIIDWSPEDDGIKI VP+TE+TKREDV+Q+IHG
Sbjct: 241 EDLTTTTSSTSVRHM--NTKPSLIPTISIIDWSPEDDGIKIVVPKTETTKREDVNQYIHG 300

Query: 301 VLYGSTTERTKTRLPVFTQLCSEKLQQE 328
           VLYGSTTERTK RLPVFTQLCSEKLQQE
Sbjct: 301 VLYGSTTERTKKRLPVFTQLCSEKLQQE 313

BLAST of Lsi02G018340 vs. NCBI nr
Match: XP_004148935.1 (uncharacterized protein LOC101215865 [Cucumis sativus] >XP_011658933.1 uncharacterized protein LOC101215865 [Cucumis sativus] >XP_031744249.1 uncharacterized protein LOC116404958 [Cucumis sativus] >XP_031744250.1 uncharacterized protein LOC116404958 [Cucumis sativus] >KAE8645918.1 hypothetical protein Csa_011889 [Cucumis sativus])

HSP 1 Score: 495.4 bits (1274), Expect = 3.9e-136
Identity = 264/330 (80.00%), Postives = 279/330 (84.55%), Query Frame = 0

Query: 1   MEDHQGKRSSKTSIIKGLNASVRPINIQMDNHLVIGGTRHYHQETNCKSPTIFDRYTIMN 60
           MED QGKRSSKTSIIKGLNAS+RP+NIQMDNHLVIGGTRHYHQETNCKSPTI D Y IMN
Sbjct: 1   MEDRQGKRSSKTSIIKGLNASIRPMNIQMDNHLVIGGTRHYHQETNCKSPTIVDCYNIMN 60

Query: 61  HYASSTPGSNSFGPRGTGSPLSPLSAIENLETPRIRSPQIYGTPVKVDEEVIVMDGILIN 120
           HYASST GSNSFG RG G  LSPLSAIENLETP IRSPQIYGTP+KVDEEVIVMDGILI+
Sbjct: 61  HYASSTSGSNSFGSRGAGLSLSPLSAIENLETPPIRSPQIYGTPMKVDEEVIVMDGILIS 120

Query: 121 SIPGGAKTVRSPLDSGSGGGLLSGKNQYRTDICRYWEDSGSCRFGHKCQFAHGKEDLRPG 180
           SI G AKTVRSPLDSGSGGG   GKNQYR+DICRYWEDSG+CRFG+KCQFAHGKEDLRPG
Sbjct: 121 SIHGEAKTVRSPLDSGSGGG---GKNQYRSDICRYWEDSGTCRFGNKCQFAHGKEDLRPG 180

Query: 181 RLPVRTKPKVPLTSDKLNILQFNEAYGSKFRNNHLQTGIAATTT---QSNSVDTITKTEI 240
           RLPVRTK K            F+E YGSKFRNNH  TGIAATTT    SN VDTITKTE+
Sbjct: 181 RLPVRTKTK------------FSETYGSKFRNNHSLTGIAATTTTQSNSNLVDTITKTEL 240

Query: 241 SKREGLGTTSSASIRHMNTNTKPSLISTISIIDWSPEDDGIKIAVPETESTKREDVDQHI 300
           SKR GL  TSS    H  TN  P+LISTISII+WSPEDDGIKIAVP TESTKREDV+QHI
Sbjct: 241 SKR-GLTPTSSTLKGH--TNNNPTLISTISIINWSPEDDGIKIAVPGTESTKREDVNQHI 300

Query: 301 HGVLYGSTTERTKTRLPVFTQLCSEKLQQE 328
           H VLYGSTTERTK RLPVF Q+CSE+LQ+E
Sbjct: 301 HEVLYGSTTERTKKRLPVFVQICSEELQEE 312

BLAST of Lsi02G018340 vs. NCBI nr
Match: TYK07952.1 (tristetraprolin-like isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 490.0 bits (1260), Expect = 1.6e-134
Identity = 262/341 (76.83%), Postives = 281/341 (82.40%), Query Frame = 0

Query: 1   MEDHQGKRSSKTSIIKGLNASVRPINIQMDNHLVIGGTRHYHQETNCKSPTIFDRYTIMN 60
           MED Q KRSS+TSIIKGLNAS+RP+NIQMDNHLVIGGTRHYHQETNCKSPTI D Y IMN
Sbjct: 1   MEDRQSKRSSRTSIIKGLNASIRPMNIQMDNHLVIGGTRHYHQETNCKSPTIVDCYNIMN 60

Query: 61  HYASSTPGSNSFGPRGTGSPLSPLSAIENLETPRIRSPQIYGTPVKVDEEVIVMDGILIN 120
           HYASST GSNSFG RG G  LSPLSAIENLETP ++SPQIYGTP+KVDEEVIVMDGILI+
Sbjct: 61  HYASSTSGSNSFGSRGAGLSLSPLSAIENLETPPVKSPQIYGTPMKVDEEVIVMDGILIS 120

Query: 121 SIPGGAKTVRSPLDSGSGGGLLSGKNQYRTDICRYWEDSGSCRFGHKCQFAHGKEDLRPG 180
           SI G AKTVRSPLDSGSGGG   GKNQYR+DICRYWEDSGSCRFG+KCQFAHGKEDLRPG
Sbjct: 121 SIHGEAKTVRSPLDSGSGGG---GKNQYRSDICRYWEDSGSCRFGNKCQFAHGKEDLRPG 180

Query: 181 RLPVRTKPKVPLTSDKLNILQFNEAYGSKFRNNHLQTGIAATTT---QSNSVDTITKTEI 240
           RLPVRTK K            F+E YGSKFRNNH  +GI+ATTT    SN VDTITKTE+
Sbjct: 181 RLPVRTKTK------------FSETYGSKFRNNHSLSGISATTTTQSNSNLVDTITKTEL 240

Query: 241 SKREGLGTTSSASIRHMNTNTKPSLISTISII-----------DWSPEDDGIKIAVPETE 300
           SKREGL  TSS+  R   TNT P+LISTISII           DWSPEDDGIKI VP TE
Sbjct: 241 SKREGLTPTSSSLKR--QTNTNPTLISTISIIDWSPEDDDGIKDWSPEDDGIKIVVPGTE 300

Query: 301 STKREDVDQHIHGVLYGSTTERTKTRLPVFTQLCSEKLQQE 328
           STKREDV+QHIH VLYGSTTERTK RLPVF+QLCSE+LQ+E
Sbjct: 301 STKREDVNQHIHEVLYGSTTERTKKRLPVFSQLCSEELQEE 324

BLAST of Lsi02G018340 vs. NCBI nr
Match: XP_022154583.1 (uncharacterized protein LOC111021811 [Momordica charantia] >XP_022154584.1 uncharacterized protein LOC111021811 [Momordica charantia])

HSP 1 Score: 431.8 bits (1109), Expect = 5.3e-117
Identity = 240/373 (64.34%), Postives = 269/373 (72.12%), Query Frame = 0

Query: 1   MEDHQGKRSSKTSIIKGLNASVRPINIQMDNHLVIGGTRHYHQETNCKSPTIFDRYT--- 60
           ME  QGKRSSKTSIIKGLN +V PINIQMDNHLVIGGT HYHQETNCKSPT+ DRY+   
Sbjct: 1   MEGRQGKRSSKTSIIKGLNVTVPPINIQMDNHLVIGGTGHYHQETNCKSPTMLDRYSEKL 60

Query: 61  ------------------------------------------IMNHYASSTPGSNSFGPR 120
                                                     IMNHYASST  S+SFG R
Sbjct: 61  DRSTSIVRYFRSRSPVIGKLPSVGDTFSTPVPDVINANYRSAIMNHYASSTSRSSSFGSR 120

Query: 121 GTGSPLSPLSAIENLETPRIRSPQIYGTPVKVDEEVIVMDGILINSIPGGAKTVRSPLDS 180
           G GS LSPLSAIENLETP  RSPQIYGTPVKVDEEVIVMDGILI+S+PGGAKT+RS  +S
Sbjct: 121 GGGSSLSPLSAIENLETPTARSPQIYGTPVKVDEEVIVMDGILISSVPGGAKTMRSASES 180

Query: 181 GSGGGLLSGKNQYRTDICRYWEDSGSCRFGHKCQFAHGKEDLRPGRLPVRTKPKVPLTSD 240
            +GGG LSGKN YRTDICR WEDSGSCR+GHKCQFAHGKE+LRP RLPV+ KPKV   SD
Sbjct: 181 VTGGGSLSGKNLYRTDICRSWEDSGSCRYGHKCQFAHGKEELRPARLPVKNKPKV---SD 240

Query: 241 KLNILQFNEAYG-SKFRNNHLQTGIAATTTQSNSVDTITKTEISKREGLGTTSSASIRHM 300
                 +   YG SKF ++H    +A TT+ S  +DTI  +E+S+ EG     + SIRHM
Sbjct: 241 -----SYCTTYGHSKFCDSH---ALAVTTSHSYVIDTINNSEVSRSEG---GKTMSIRHM 300

Query: 301 NTNTKPSLISTISIIDWSPEDDGIKIAVPETESTKREDVDQHIHGVLYGSTTERTKTRLP 328
             NTKPSLISTISI+DWSPEDDGIKI +P ++STKREDV+Q+IH VLYGST ERTK RLP
Sbjct: 301 --NTKPSLISTISIVDWSPEDDGIKIVLPNSKSTKREDVNQYIHEVLYGSTNERTKKRLP 357

BLAST of Lsi02G018340 vs. NCBI nr
Match: XP_023536031.1 (uncharacterized protein LOC111797287 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023536040.1 uncharacterized protein LOC111797287 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 378.6 bits (971), Expect = 5.3e-101
Identity = 221/374 (59.09%), Postives = 247/374 (66.04%), Query Frame = 0

Query: 1   MEDHQGKRSSKTSIIKGLNASVRPINIQMDNHLVIGGTRHYHQETNCKSPTIFDRY---- 60
           MED QGKRSSK +IIKGLNA+VRPI IQMDNHLVIGGT HYHQETN K PTI DRY    
Sbjct: 1   MEDRQGKRSSKAAIIKGLNATVRPIKIQMDNHLVIGGTGHYHQETNSKIPTILDRYAEKH 60

Query: 61  -----------------------------------------TIMNHYASSTPGSNSFGPR 120
                                                    +I+NH+ASST GS+SFG R
Sbjct: 61  ERSTPIVSYFRSRSPVVGKLPSVGDTFSTPVADVINANYRSSIINHFASSTSGSSSFGSR 120

Query: 121 GTGSPLSPLSAIENLETPRIRSPQIYGTPVKVDEEVIVMDGILINSIPGGAKTVRSPLDS 180
             GS LSPLSAIENLET  +RSPQIYGTP+KV EEVIVMD ILI+S+ GGAKT++S LDS
Sbjct: 121 RGGSSLSPLSAIENLETTPVRSPQIYGTPLKVHEEVIVMDEILISSVHGGAKTLKSALDS 180

Query: 181 GSGGGLLSGKNQYRTDICRYWEDSGSCRFGHKCQFAHGKEDLRPGRLPVRTKPKVPLTSD 240
           GSGGG    KNQYRTDICR WEDSGSCRFGHKCQFAHGKE+LRP  LP++TKPK      
Sbjct: 181 GSGGGSSLSKNQYRTDICRSWEDSGSCRFGHKCQFAHGKEELRPVHLPLKTKPK------ 240

Query: 241 KLNILQFNEAY---GSKFRNNHLQTGIAATTTQSNSVDTITKTEISKREGLGTTSSASIR 300
                 F E Y   G K RNNH  TGIAA TTQSNS+D   KTE+S+R      S  SI 
Sbjct: 241 ------FGEPYLTHGLKSRNNHSLTGIAA-TTQSNSLDITFKTELSRR----GHSINSIH 300

Query: 301 HMNTNTKPSLISTISIIDWSPEDDGIKIAVPETESTKREDVDQHIHGVLYGSTTERTKTR 327
           ++NT             DWSPEDD I++ VPET+ST R DVDQHIH VLYGSTTERTK R
Sbjct: 301 NLNT-------------DWSPEDDDIEVVVPETKST-RGDVDQHIHEVLYGSTTERTKKR 343

BLAST of Lsi02G018340 vs. TAIR 10
Match: AT1G66810.1 (Zinc finger C-x8-C-x5-C-x3-H type family protein )

HSP 1 Score: 47.8 bits (112), Expect = 2.0e-05
Identity = 15/31 (48.39%), Postives = 25/31 (80.65%), Query Frame = 0

Query: 149 RTDICRYWEDSGSCRFGHKCQFAHGKEDLRP 180
           +T++C  W+++G+C +G  CQFAHG ++LRP
Sbjct: 234 KTELCNKWQETGACCYGDNCQFAHGIDELRP 264

BLAST of Lsi02G018340 vs. TAIR 10
Match: AT1G68200.1 (Zinc finger C-x8-C-x5-C-x3-H type family protein )

HSP 1 Score: 47.4 bits (111), Expect = 2.6e-05
Identity = 15/31 (48.39%), Postives = 25/31 (80.65%), Query Frame = 0

Query: 149 RTDICRYWEDSGSCRFGHKCQFAHGKEDLRP 180
           +T++C  W+++G+C +G  CQFAHG ++LRP
Sbjct: 224 KTELCNKWQETGTCPYGDHCQFAHGIKELRP 254

BLAST of Lsi02G018340 vs. TAIR 10
Match: AT1G68200.2 (Zinc finger C-x8-C-x5-C-x3-H type family protein )

HSP 1 Score: 47.4 bits (111), Expect = 2.6e-05
Identity = 15/31 (48.39%), Postives = 25/31 (80.65%), Query Frame = 0

Query: 149 RTDICRYWEDSGSCRFGHKCQFAHGKEDLRP 180
           +T++C  W+++G+C +G  CQFAHG ++LRP
Sbjct: 223 KTELCNKWQETGTCPYGDHCQFAHGIKELRP 253

BLAST of Lsi02G018340 vs. TAIR 10
Match: AT1G32360.1 (Zinc finger (CCCH-type) family protein )

HSP 1 Score: 46.6 bits (109), Expect = 4.5e-05
Identity = 21/44 (47.73%), Postives = 28/44 (63.64%), Query Frame = 0

Query: 135 SGSGGGL-LSGKNQYRTDICRYWEDSGSCRFGHKCQFAHGKEDL 178
           SGSG G+ +   + ++T IC  WE +G C FG KC FAHG  +L
Sbjct: 247 SGSGSGIQILKPSNWKTRICNKWEITGYCPFGAKCHFAHGAAEL 290

BLAST of Lsi02G018340 vs. TAIR 10
Match: AT1G01350.1 (Zinc finger (CCCH-type/C3HC4-type RING finger) family protein )

HSP 1 Score: 43.9 bits (102), Expect = 2.9e-04
Identity = 20/61 (32.79%), Postives = 34/61 (55.74%), Query Frame = 0

Query: 127 KTVRSPLDSGSGGGL-------LSGKNQYRTDICRYWEDSGSCRFGHKCQFAHGKEDLRP 181
           +T+ S    GS G L       +S +  Y+ DIC+ ++++G C +G  C+F H + D +P
Sbjct: 173 QTISSEKAGGSHGPLRASAHIRVSARFDYQPDICKDYKETGYCGYGDSCKFLHDRGDYKP 232

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q5ISE23.6e-0752.38mRNA decay activator protein ZFP36L3 OS=Mus musculus OX=10090 GN=Zfp36l3 PE=1 SV... [more]
P479741.4e-0651.22mRNA decay activator protein ZFP36L2 OS=Homo sapiens OX=9606 GN=ZFP36L2 PE=1 SV=... [more]
P479792.3e-0649.09Zinc finger protein zfs1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) ... [more]
Q073525.1e-0644.68mRNA decay activator protein ZFP36L1 OS=Homo sapiens OX=9606 GN=ZFP36L1 PE=1 SV=... [more]
P239498.8e-0626.81mRNA decay activator protein ZFP36L2 OS=Mus musculus OX=10090 GN=Zfp36l2 PE=1 SV... [more]
Match NameE-valueIdentityDescription
A0A5D3C9H37.9e-13576.83Tristetraprolin-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_... [more]
A0A6J1DKP72.6e-11764.34uncharacterized protein LOC111021811 OS=Momordica charantia OX=3673 GN=LOC111021... [more]
A0A0A0K5292.5e-10477.94C3H1-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G103290 P... [more]
A0A6J1IEX11.7e-10058.56uncharacterized protein LOC111472616 isoform X1 OS=Cucurbita maxima OX=3661 GN=L... [more]
A0A6J1ICU52.2e-10058.56uncharacterized protein LOC111472626 isoform X1 OS=Cucurbita maxima OX=3661 GN=L... [more]
Match NameE-valueIdentityDescription
XP_038897010.15.4e-14682.62uncharacterized protein LOC120085195 [Benincasa hispida] >XP_038897011.1 unchara... [more]
XP_004148935.13.9e-13680.00uncharacterized protein LOC101215865 [Cucumis sativus] >XP_011658933.1 uncharact... [more]
TYK07952.11.6e-13476.83tristetraprolin-like isoform X2 [Cucumis melo var. makuwa][more]
XP_022154583.15.3e-11764.34uncharacterized protein LOC111021811 [Momordica charantia] >XP_022154584.1 uncha... [more]
XP_023536031.15.3e-10159.09uncharacterized protein LOC111797287 isoform X1 [Cucurbita pepo subsp. pepo] >XP... [more]
Match NameE-valueIdentityDescription
AT1G66810.12.0e-0548.39Zinc finger C-x8-C-x5-C-x3-H type family protein [more]
AT1G68200.12.6e-0548.39Zinc finger C-x8-C-x5-C-x3-H type family protein [more]
AT1G68200.22.6e-0548.39Zinc finger C-x8-C-x5-C-x3-H type family protein [more]
AT1G32360.14.5e-0547.73Zinc finger (CCCH-type) family protein [more]
AT1G01350.12.9e-0432.79Zinc finger (CCCH-type/C3HC4-type RING finger) family protein [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000571Zinc finger, CCCH-typeSMARTSM00356c3hfinal6coord: 147..174
e-value: 1.0E-6
score: 38.3
IPR000571Zinc finger, CCCH-typePFAMPF00642zf-CCCHcoord: 148..174
e-value: 1.4E-7
score: 31.2
IPR000571Zinc finger, CCCH-typePROSITEPS50103ZF_C3H1coord: 147..175
score: 16.126343
NoneNo IPR availableGENE3D4.10.1000.10coord: 142..180
e-value: 1.9E-15
score: 57.9
NoneNo IPR availablePANTHERPTHR12547CCCH ZINC FINGER/TIS11-RELATEDcoord: 8..319
NoneNo IPR availablePANTHERPTHR12547:SF142ZINC FINGER C-X8-C-X5-C-X3-H TYPE PROTEINcoord: 8..319
IPR036855Zinc finger, CCCH-type superfamilySUPERFAMILY90229CCCH zinc fingercoord: 147..179

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi02G018340.1Lsi02G018340.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003677 DNA binding
molecular_function GO:0046872 metal ion binding