Lsi02G008650 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGAAGTGTAATTCTGTGTTTTGATGATTGTAGGTGGTATGAAGGTGAAAGCTGACAGGGATGAGTCTTCCCCATACGCAGCTATGCTTGCAGCACAGGATGTTTCCCAGAGATGCAAGGTTCCATCCTCTTAATATTGTTTCTTAATTACCCGTTCCCCCATTTATATGGATTCTAATATTTATACCTGACTGTCTGAAAGTTTCCTTTGGAACTTATGATATCCCATTTTCTTCATTTCATCTTTACTGTTCGTGACTTTGTCTTTTCATCACTGAACAATATTACTTTTGTGTGGCCATATTTTTCACGAAACAGGAACTCGGTATTACTGCCCTTCATATTAAACTGCGTGCCACCGGAGGAAACAAGACCAAAACACCTGGCCCAGGTGCCCAGTCTGCACTTCGTGCTCTTGCTCGTTCTGGAATGAGGATTGGACGCATAGGTGAAGCCCTTGTCTCTGTAGCATCAACGAATTCAGATGAAAATACATCCATATATATACATTAATGCATTAATGCTGCACATTCACAACTTCACTATTAAACTGCATTTAACCGCATGCTCTATAAGGCTATAATCTAACTCCCATATACCTTTTTTATATGTTCCAGAGGATGTGACTCCAATTCCAACAGACAGCACTCGCAGAAAGGGTGGAAGAAGAGGAAGAAGGCTGTAAGCTTGTTCCTGGATTCCTCCTATTATGGCCGTGTCAGTGGTTTCTCTATGGTTCTGATGCTCCTTAAGCTTTGCTGCCTTAGTTTTTCAGAACTTCAACTTGGTTTTTATTATTGTTTTGTCAGGGATGTTTTGTCTTCGATTTTGTTTTATGTAGAACCGAGACTGTGAAAGAGGAATTTTTGGCTTTAGTTTAA ATGGGAAGTGGTATGAAGGTGAAAGCTGACAGGGATGAGTCTTCCCCATACGCAGCTATGCTTGCAGCACAGGATGTTTCCCAGAGATGCAAGGAACTCGGTATTACTGCCCTTCATATTAAACTGCGTGCCACCGGAGGAAACAAGACCAAAACACCTGGCCCAGGTGCCCAGTCTGCACTTCGTGCTCTTGCTCGTTCTGGAATGAGGATTGGACGCATAGAGGATGTGACTCCAATTCCAACAGACAGCACTCGCAGAAAGGGTGGAAGAAGAGGAAGAAGGCTAACCGAGACTGTGAAAGAGGAATTTTTGGCTTTAGTTTAA ATGGGAAGTGGTATGAAGGTGAAAGCTGACAGGGATGAGTCTTCCCCATACGCAGCTATGCTTGCAGCACAGGATGTTTCCCAGAGATGCAAGGAACTCGGTATTACTGCCCTTCATATTAAACTGCGTGCCACCGGAGGAAACAAGACCAAAACACCTGGCCCAGGTGCCCAGTCTGCACTTCGTGCTCTTGCTCGTTCTGGAATGAGGATTGGACGCATAGAGGATGTGACTCCAATTCCAACAGACAGCACTCGCAGAAAGGGTGGAAGAAGAGGAAGAAGGCTAACCGAGACTGTGAAAGAGGAATTTTTGGCTTTAGTTTAA MGSGMKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMRIGRIEDVTPIPTDSTRRKGGRRGRRLTETVKEEFLALV Homology
BLAST of Lsi02G008650 vs. ExPASy Swiss-Prot
Match: P19950 (40S ribosomal protein S14 OS=Zea mays OX=4577 PE=3 SV=1) HSP 1 Score: 180.3 bits (456), Expect = 1.2e-44 Identity = 90/93 (96.77%), Postives = 93/93 (100.00%), Query Frame = 0
BLAST of Lsi02G008650 vs. ExPASy Swiss-Prot
Match: Q9SIH0 (40S ribosomal protein S14-1 OS=Arabidopsis thaliana OX=3702 GN=RPS14A PE=1 SV=1) HSP 1 Score: 179.5 bits (454), Expect = 2.0e-44 Identity = 89/93 (95.70%), Postives = 93/93 (100.00%), Query Frame = 0
BLAST of Lsi02G008650 vs. ExPASy Swiss-Prot
Match: Q9CAX6 (40S ribosomal protein S14-2 OS=Arabidopsis thaliana OX=3702 GN=RPS14B PE=1 SV=1) HSP 1 Score: 179.5 bits (454), Expect = 2.0e-44 Identity = 89/93 (95.70%), Postives = 93/93 (100.00%), Query Frame = 0
BLAST of Lsi02G008650 vs. ExPASy Swiss-Prot
Match: P42036 (40S ribosomal protein S14-3 OS=Arabidopsis thaliana OX=3702 GN=RPS14C PE=2 SV=2) HSP 1 Score: 179.5 bits (454), Expect = 2.0e-44 Identity = 89/93 (95.70%), Postives = 93/93 (100.00%), Query Frame = 0
BLAST of Lsi02G008650 vs. ExPASy Swiss-Prot
Match: P19951 (40S ribosomal protein S14 OS=Zea mays OX=4577 PE=3 SV=1) HSP 1 Score: 179.1 bits (453), Expect = 2.7e-44 Identity = 89/93 (95.70%), Postives = 93/93 (100.00%), Query Frame = 0
BLAST of Lsi02G008650 vs. ExPASy TrEMBL
Match: A0A4Y1RA67 (Ribosomal protein S11 family protein OS=Prunus dulcis OX=3755 GN=Prudu_011250 PE=3 SV=1) HSP 1 Score: 183.7 bits (465), Expect = 4.0e-43 Identity = 94/102 (92.16%), Postives = 96/102 (94.12%), Query Frame = 0
BLAST of Lsi02G008650 vs. ExPASy TrEMBL
Match: A0A2P5WRP6 (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA26900 PE=3 SV=1) HSP 1 Score: 183.7 bits (465), Expect = 4.0e-43 Identity = 92/97 (94.85%), Postives = 96/97 (98.97%), Query Frame = 0
BLAST of Lsi02G008650 vs. ExPASy TrEMBL
Match: A0A6A1W8Y3 (Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR2G005416 PE=3 SV=1) HSP 1 Score: 183.3 bits (464), Expect = 5.2e-43 Identity = 93/104 (89.42%), Postives = 98/104 (94.23%), Query Frame = 0
BLAST of Lsi02G008650 vs. ExPASy TrEMBL
Match: A0A6J1J4Y9 (40S ribosomal protein S14-2 OS=Cucurbita maxima OX=3661 GN=LOC111481789 PE=3 SV=1) HSP 1 Score: 183.0 bits (463), Expect = 6.8e-43 Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 0
BLAST of Lsi02G008650 vs. ExPASy TrEMBL
Match: A0A6J1KQN4 (40S ribosomal protein S14-2-like OS=Cucurbita maxima OX=3661 GN=LOC111495605 PE=3 SV=1) HSP 1 Score: 183.0 bits (463), Expect = 6.8e-43 Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 0
BLAST of Lsi02G008650 vs. NCBI nr
Match: KAG6573353.1 (hypothetical protein SDJN03_27240, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 188.3 bits (477), Expect = 3.4e-44 Identity = 101/116 (87.07%), Postives = 101/116 (87.07%), Query Frame = 0
BLAST of Lsi02G008650 vs. NCBI nr
Match: KAG6583920.1 (hypothetical protein SDJN03_19852, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 185.3 bits (469), Expect = 2.8e-43 Identity = 94/99 (94.95%), Postives = 97/99 (97.98%), Query Frame = 0
BLAST of Lsi02G008650 vs. NCBI nr
Match: PPR93772.1 (hypothetical protein GOBAR_AA26900 [Gossypium barbadense]) HSP 1 Score: 183.7 bits (465), Expect = 8.3e-43 Identity = 92/97 (94.85%), Postives = 96/97 (98.97%), Query Frame = 0
BLAST of Lsi02G008650 vs. NCBI nr
Match: BBH01089.1 (Ribosomal protein S11 family protein [Prunus dulcis]) HSP 1 Score: 183.7 bits (465), Expect = 8.3e-43 Identity = 94/102 (92.16%), Postives = 96/102 (94.12%), Query Frame = 0
BLAST of Lsi02G008650 vs. NCBI nr
Match: KAB1221343.1 (hypothetical protein CJ030_MR2G005416 [Morella rubra]) HSP 1 Score: 183.3 bits (464), Expect = 1.1e-42 Identity = 93/104 (89.42%), Postives = 98/104 (94.23%), Query Frame = 0
BLAST of Lsi02G008650 vs. TAIR 10
Match: AT2G36160.1 (Ribosomal protein S11 family protein ) HSP 1 Score: 179.5 bits (454), Expect = 1.5e-45 Identity = 89/93 (95.70%), Postives = 93/93 (100.00%), Query Frame = 0
BLAST of Lsi02G008650 vs. TAIR 10
Match: AT3G11510.1 (Ribosomal protein S11 family protein ) HSP 1 Score: 179.5 bits (454), Expect = 1.5e-45 Identity = 89/93 (95.70%), Postives = 93/93 (100.00%), Query Frame = 0
BLAST of Lsi02G008650 vs. TAIR 10
Match: AT3G52580.1 (Ribosomal protein S11 family protein ) HSP 1 Score: 179.5 bits (454), Expect = 1.5e-45 Identity = 89/93 (95.70%), Postives = 93/93 (100.00%), Query Frame = 0
BLAST of Lsi02G008650 vs. TAIR 10
Match: ATCG00750.1 (ribosomal protein S11 ) HSP 1 Score: 42.7 bits (99), Expect = 2.1e-04 Identity = 25/78 (32.05%), Postives = 41/78 (52.56%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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