Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAAGAAGAAACAAAATGGAAAACCAAGTAGAAGCATTGGAAACCAAGTTGAAGAAGGTTACGGATGAAGTTCAGAACATCTCAACAATGGACAACAACGTCACCGCTCTGTTACAACAAATAGCCCAGCTTCTGACGGTACAACAACAACAACAACGCCTACCTGAGTACGCAGCCCACCGGATACTGGACCTGGAGCTACCAATGTTCGATGGAACCGATTCACTCATGTGGATCCTGAAAATGGAACGCTACTTTGAAGTTCACCACATGGACGACATTGCCAAGATGATGGAGATCGTCCTTCTCTGTATGTCTGGCCAAGCCCTAGCGTGGTTCCGATGCTTTCGAAACTGGGGAAAACCTCCGGAATCGTGGGGTGAGTTTCGGGGTGCTTTGTATATGCGATTTGGAGACGATCACAGCGTGTGTTTCAGTTTCATTGCCTTGCAGCAAGAGGGGAGTGTTAGGGACTATTGTAGCAAGTTCGAGTCACTAGGGGCGCTCCTTCCGGAACTCCCTGAAGATCTTGTTGAAGCAAAATTTATGACCGGCTTGAAGACGGAGATTCGGCTGGAGGTTCGGACGTTACAACCAAAAGGTATTCTGGACACGATGTATAGGGCGAGGTTAGTGGAAAATAAGATCAACGTTGCTCTGAACTCAGCCAAGCGTAAAAGCACGGTCAAGGAGAGGTCTGTGGTCGTTAAGATAGTCGATTGGACTGATTATAACTTAATCTCTAAAAACTTAGCTACGGACTTGAAGCTTCCGTTGGACATGTACGGCGACTACAATGTGGTTTTGGGTTGCGGGAAGAAGGTTAAAGGAGACGGAATTTGTCGTGGAGTGTTGCTGCAAATCGGGAATGACACCTATGTGGAGGACTTCTTTCCCCTTCAAATGGGAGAGGATGATGAGGTGATACTGGGAAATCTGTGGCTGGTGGCCTTAGGCAAGATGGAAGTTGATTGGAAACATCTCCCGATGAAGCTGAAGGTGGGGAAGGAGATTGTAAATTTACGAAGAGACCCATCCCTCTGA
mRNA sequence
ATGGGAAGAAGAAACAAAATGGAAAACCAAGTAGAAGCATTGGAAACCAAGTTGAAGAAGGTTACGGATGAAGTTCAGAACATCTCAACAATGGACAACAACGTCACCGCTCTGTTACAACAAATAGCCCAGCTTCTGACGGTACAACAACAACAACAACGCCTACCTGAGTACGCAGCCCACCGGATACTGGACCTGGAGCTACCAATGTTCGATGGAACCGATTCACTCATGTGGATCCTGAAAATGGAACGCTACTTTGAAGTTCACCACATGGACGACATTGCCAAGATGATGGAGATCGTCCTTCTCTGTATGTCTGGCCAAGCCCTAGCGTGGTTCCGATGCTTTCGAAACTGGGGAAAACCTCCGGAATCGTGGGGTGAGTTTCGGGGTGCTTTGTATATGCGATTTGGAGACGATCACAGCGTGTGTTTCAGTTTCATTGCCTTGCAGCAAGAGGGGAGTGTTAGGGACTATTGTAGCAAGTTCGAGTCACTAGGGGCGCTCCTTCCGGAACTCCCTGAAGATCTTGTTGAAGCAAAATTTATGACCGGCTTGAAGACGGAGATTCGGCTGGAGGTTCGGACGTTACAACCAAAAGGTATTCTGGACACGATGTATAGGGCGAGGTTAGTGGAAAATAAGATCAACGTTGCTCTGAACTCAGCCAAGCGTAAAAGCACGGTCAAGGAGAGGTCTGTGGTCGTTAAGATAGTCGATTGGACTGATTATAACTTAATCTCTAAAAACTTAGCTACGGACTTGAAGCTTCCGTTGGACATGTACGGCGACTACAATGTGGTTTTGGGTTGCGGGAAGAAGGTTAAAGGAGACGGAATTTGTCGTGGAGTGTTGCTGCAAATCGGGAATGACACCTATGTGGAGGACTTCTTTCCCCTTCAAATGGGAGAGGATGATGAGGTGATACTGGGAAATCTGTGGCTGGTGGCCTTAGGCAAGATGGAAGTTGATTGGAAACATCTCCCGATGAAGCTGAAGGTGGGGAAGGAGATTGTAAATTTACGAAGAGACCCATCCCTCTGA
Coding sequence (CDS)
ATGGGAAGAAGAAACAAAATGGAAAACCAAGTAGAAGCATTGGAAACCAAGTTGAAGAAGGTTACGGATGAAGTTCAGAACATCTCAACAATGGACAACAACGTCACCGCTCTGTTACAACAAATAGCCCAGCTTCTGACGGTACAACAACAACAACAACGCCTACCTGAGTACGCAGCCCACCGGATACTGGACCTGGAGCTACCAATGTTCGATGGAACCGATTCACTCATGTGGATCCTGAAAATGGAACGCTACTTTGAAGTTCACCACATGGACGACATTGCCAAGATGATGGAGATCGTCCTTCTCTGTATGTCTGGCCAAGCCCTAGCGTGGTTCCGATGCTTTCGAAACTGGGGAAAACCTCCGGAATCGTGGGGTGAGTTTCGGGGTGCTTTGTATATGCGATTTGGAGACGATCACAGCGTGTGTTTCAGTTTCATTGCCTTGCAGCAAGAGGGGAGTGTTAGGGACTATTGTAGCAAGTTCGAGTCACTAGGGGCGCTCCTTCCGGAACTCCCTGAAGATCTTGTTGAAGCAAAATTTATGACCGGCTTGAAGACGGAGATTCGGCTGGAGGTTCGGACGTTACAACCAAAAGGTATTCTGGACACGATGTATAGGGCGAGGTTAGTGGAAAATAAGATCAACGTTGCTCTGAACTCAGCCAAGCGTAAAAGCACGGTCAAGGAGAGGTCTGTGGTCGTTAAGATAGTCGATTGGACTGATTATAACTTAATCTCTAAAAACTTAGCTACGGACTTGAAGCTTCCGTTGGACATGTACGGCGACTACAATGTGGTTTTGGGTTGCGGGAAGAAGGTTAAAGGAGACGGAATTTGTCGTGGAGTGTTGCTGCAAATCGGGAATGACACCTATGTGGAGGACTTCTTTCCCCTTCAAATGGGAGAGGATGATGAGGTGATACTGGGAAATCTGTGGCTGGTGGCCTTAGGCAAGATGGAAGTTGATTGGAAACATCTCCCGATGAAGCTGAAGGTGGGGAAGGAGATTGTAAATTTACGAAGAGACCCATCCCTCTGA
Protein sequence
MGRRNKMENQVEALETKLKKVTDEVQNISTMDNNVTALLQQIAQLLTVQQQQQRLPEYAAHRILDLELPMFDGTDSLMWILKMERYFEVHHMDDIAKMMEIVLLCMSGQALAWFRCFRNWGKPPESWGEFRGALYMRFGDDHSVCFSFIALQQEGSVRDYCSKFESLGALLPELPEDLVEAKFMTGLKTEIRLEVRTLQPKGILDTMYRARLVENKINVALNSAKRKSTVKERSVVVKIVDWTDYNLISKNLATDLKLPLDMYGDYNVVLGCGKKVKGDGICRGVLLQIGNDTYVEDFFPLQMGEDDEVILGNLWLVALGKMEVDWKHLPMKLKVGKEIVNLRRDPSL
Homology
BLAST of Lsi02G006470 vs. ExPASy TrEMBL
Match:
A0A5D3BJD9 (Aminoacyl-tRNA ligase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G006110 PE=4 SV=1)
HSP 1 Score: 529.6 bits (1363), Expect = 9.6e-147
Identity = 268/345 (77.68%), Postives = 297/345 (86.09%), Query Frame = 0
Query: 7 MENQVEALETKLKKVTD-EVQNI-STMDNNVTALLQQIAQLLTVQQQQQRLPEYA-AHRI 66
MEN VEAL+ KLKKV D EV NI +T DNN+T L+ Q+A LL QQ LP+YA HR+
Sbjct: 1 MENPVEALDAKLKKVEDEEVHNIPTTHDNNLTTLMHQMALLL--NGHQQCLPQYAPTHRM 60
Query: 67 LDLELPMFDGTDSLMWILKMERYFEVHHMDDIAKMMEIVLLCMSGQALAWFRCFRNWGKP 126
+LELPMFDGTD+LMWILKMERYFEVHH+DDIA+MM+ +LLCMSGQALAWFRCF+NWGKP
Sbjct: 61 PNLELPMFDGTDTLMWILKMERYFEVHHIDDIARMMDTILLCMSGQALAWFRCFQNWGKP 120
Query: 127 PESWGEFRGALYMRFGDDHSVCFSFIALQQEGSVRDYCSKFESLGALLPELPEDLVEAKF 186
PESW EFR +LYMRFGD +VC F+ L+QEGSV +YCSKFE+LGALLPEL ++EAKF
Sbjct: 121 PESWDEFRDSLYMRFGDARNVCSKFLGLEQEGSVEEYCSKFETLGALLPELQHVVLEAKF 180
Query: 187 MTGLKTEIRLEVRTLQPKGILDTMYRARLVENKINVALNSAKRKSTVKERSVVVKIVDWT 246
M GLKTEIR +VR L PK ILD M+RARL E K NVALNS KRK TVKERSV+VK+V WT
Sbjct: 181 MNGLKTEIREDVRMLHPKDILDIMHRARLGEKKNNVALNSTKRKGTVKERSVIVKVVSWT 240
Query: 247 DYNLISKNLATDLKLPLDMYGDYNVVLGCGKKVKGDGICRGVLLQIGNDTYVEDFFPLQM 306
DYNLISKNLATDLKL LDMYGDY+VVLG GKKVKGDGICRGVLLQIGNDTYVEDFFPLQM
Sbjct: 241 DYNLISKNLATDLKLKLDMYGDYSVVLGSGKKVKGDGICRGVLLQIGNDTYVEDFFPLQM 300
Query: 307 GEDDEVILGNLWLVALGKMEVDWKHLPMKLKVGKEIVNLRRDPSL 349
GEDDEVILGNLWLVALGKMEVDWK+LPMKLKVGKE V LR+DP L
Sbjct: 301 GEDDEVILGNLWLVALGKMEVDWKNLPMKLKVGKETVTLRKDPFL 343
BLAST of Lsi02G006470 vs. ExPASy TrEMBL
Match:
A0A1S4DXQ7 (uncharacterized protein LOC107991016 OS=Cucumis melo OX=3656 GN=LOC107991016 PE=4 SV=1)
HSP 1 Score: 510.0 bits (1312), Expect = 7.9e-141
Identity = 258/331 (77.95%), Postives = 286/331 (86.40%), Query Frame = 0
Query: 7 MENQVEALETKLKKVTD-EVQNI-STMDNNVTALLQQIAQLLTVQQQQQRLPEYA-AHRI 66
MEN VEAL+ KLKKV D EV NI +T DNN+T L+ Q+A LL QQ LP+YA HR+
Sbjct: 1 MENPVEALDAKLKKVEDEEVHNIPTTHDNNLTTLMHQMALLL--NGHQQCLPQYAPTHRM 60
Query: 67 LDLELPMFDGTDSLMWILKMERYFEVHHMDDIAKMMEIVLLCMSGQALAWFRCFRNWGKP 126
+LELPMFDGTD+LMWILKMERYFEVHH+DDIA+MM+ +LLCMSGQALAWFRCF+NWGKP
Sbjct: 61 PNLELPMFDGTDTLMWILKMERYFEVHHIDDIARMMDTILLCMSGQALAWFRCFQNWGKP 120
Query: 127 PESWGEFRGALYMRFGDDHSVCFSFIALQQEGSVRDYCSKFESLGALLPELPEDLVEAKF 186
PESW EFR +LYMRFGD +VC F+ L+QEGSV +YCSKFE+LGALLPEL ++EAKF
Sbjct: 121 PESWDEFRDSLYMRFGDARNVCSKFLGLEQEGSVEEYCSKFETLGALLPELQHVVLEAKF 180
Query: 187 MTGLKTEIRLEVRTLQPKGILDTMYRARLVENKINVALNSAKRKSTVKERSVVVKIVDWT 246
M GLKTEIR +VR L PK ILD M+RARL E K NVALNS KRK TVKERSV+VK+V WT
Sbjct: 181 MNGLKTEIREDVRMLHPKDILDIMHRARLGEKKNNVALNSTKRKGTVKERSVIVKVVSWT 240
Query: 247 DYNLISKNLATDLKLPLDMYGDYNVVLGCGKKVKGDGICRGVLLQIGNDTYVEDFFPLQM 306
DYNLISKNLATDLKL LDMYGDY+VVLG GKKVKGDGICRGVLLQIGNDTYVEDFFPLQM
Sbjct: 241 DYNLISKNLATDLKLKLDMYGDYSVVLGSGKKVKGDGICRGVLLQIGNDTYVEDFFPLQM 300
Query: 307 GEDDEVILGNLWLVALGKMEVDWKHLPMKLK 335
GEDDEVILGNLWLVALGKMEVDWK+LPMKLK
Sbjct: 301 GEDDEVILGNLWLVALGKMEVDWKNLPMKLK 329
BLAST of Lsi02G006470 vs. ExPASy TrEMBL
Match:
A0A0A0LUB3 (Retrotrans_gag domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G064860 PE=4 SV=1)
HSP 1 Score: 319.3 bits (817), Expect = 2.0e-83
Identity = 169/233 (72.53%), Postives = 186/233 (79.83%), Query Frame = 0
Query: 7 MENQVEALETKLKKVTD-EVQNISTMDNNVTALLQQIAQLLTVQQQQQRLPEYA-AHRIL 66
MEN VEALE KLKKV D EV NI DNN T LL Q+A LL QQRL +YA HR+
Sbjct: 1 MENPVEALEAKLKKVEDEEVHNIPITDNNHTTLLHQMALLLNA--HQQRLLQYAPTHRMP 60
Query: 67 DLELPMFDGTDSLMWILKMERYFEVHHMDDIAKMMEIVLLCMSGQALAWFRCFRNWGKPP 126
+LELPMFDGTD+LMWILKMERYFEVHH+DDIA+MME +LLCMSGQALAWFRCF+NWG PP
Sbjct: 61 NLELPMFDGTDTLMWILKMERYFEVHHIDDIAQMMETILLCMSGQALAWFRCFQNWGNPP 120
Query: 127 ESWGEFRGALYMRFGDDHSVCFSFIALQQEGSVRDYCSKFESLGALLPELPEDLVEAKFM 186
ESWGEFRG+LY RFGD H V FI LQQEGSV +YCSKFESLGALLPEL +VEAKFM
Sbjct: 121 ESWGEFRGSLYKRFGDGHRVLSRFIGLQQEGSVGEYCSKFESLGALLPELSHCVVEAKFM 180
Query: 187 TGLKTEIRLEVRTLQPKGILDTMYRARLVENKINVALNSAKRKSTVKERSVVV 238
GLKTEIR EVR L +GILD M+RARL E K NVA NS KRK TVKE S+++
Sbjct: 181 NGLKTEIRGEVRMLDTEGILDIMHRARLAEIKNNVAFNSTKRKGTVKESSLIM 231
BLAST of Lsi02G006470 vs. ExPASy TrEMBL
Match:
A0A5D3C860 (Transposon Tf2-1 polyprotein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold453G00050 PE=4 SV=1)
HSP 1 Score: 166.0 bits (419), Expect = 2.8e-37
Identity = 107/336 (31.85%), Postives = 163/336 (48.51%), Query Frame = 0
Query: 66 LELPMFDGTDSLMWILKMERYFEVHHMDDIAKMMEIVLLCMSGQALAWFRCFRNWGKPPE 125
+E+P+F G D W+ + ERYF++H + D KM+ + + G AL W+R K
Sbjct: 127 VEMPVFAGEDPDSWLFRAERYFQIHKLSDSEKML-VSTISFDGPALNWYRSQEEREK-FT 186
Query: 126 SWGEFRGALYMRF--GDDHSVCFSFIALQQEGSVRDYCSKFESLGALLPELPEDLVEAKF 185
SW + L +RF D V F+ ++QE +V DY + F+ L A L ++P+ +V+ F
Sbjct: 187 SWANLKERLLVRFRSSRDEKVLERFLRVKQESTVDDYRNLFDKLVAPLSDVPDPVVKDTF 246
Query: 186 MTGLKTEIRLEVRTLQPKGILDTMYRARLVENK--------------------------- 245
M GL IR EVR +PKG+ + M A+LVEN+
Sbjct: 247 MNGLFPWIRAEVRICRPKGLAEMMEFAQLVENREIERNEVNLNNFAGGKYSQQNTVNNRT 306
Query: 246 ------------------------INVALNSAKRKSTVKERSVVVKIVDWTDYNLISKNL 305
N + + K K ++ER V++ I +N IS+ L
Sbjct: 307 PANTNSDSKTNTNFPMRTITLRSSNNAEICTMKVKGKIQEREVIILIDYGATHNFISEKL 366
Query: 306 ATDLKLPLDMYGDYNVVLGCGKKVKGDGICRGVLLQIGNDTYVEDFFPLQMGEDDEVILG 349
L+LP+ G Y V+LG G V+G GIC V +Q+ N E+F PL++G D V+LG
Sbjct: 367 VESLQLPVKETGHYGVILGSGTVVQGKGICENVEIQLSNWKVKEEFLPLELGGVD-VVLG 426
BLAST of Lsi02G006470 vs. ExPASy TrEMBL
Match:
A0A5A7T6B1 (Transposon Ty3-G Gag-Pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold86G002030 PE=4 SV=1)
HSP 1 Score: 164.5 bits (415), Expect = 8.1e-37
Identity = 107/336 (31.85%), Postives = 162/336 (48.21%), Query Frame = 0
Query: 66 LELPMFDGTDSLMWILKMERYFEVHHMDDIAKMMEIVLLCMSGQALAWFRCFRNWGKPPE 125
+E+P+F G D W+ + ERYF++H + D KM+ + + G AL W+R K
Sbjct: 127 VEMPVFAGEDPDSWLFRAERYFQIHKLSDSEKML-VSTISFDGPALNWYRSQEEREK-FT 186
Query: 126 SWGEFRGALYMRF--GDDHSVCFSFIALQQEGSVRDYCSKFESLGALLPELPEDLVEAKF 185
SW + L +RF D V F+ ++QE +V DY + F+ L A L ++P+ +V+ F
Sbjct: 187 SWANLKERLLVRFRSSRDEKVLERFLRVKQESTVDDYRNLFDKLVAPLSDVPDPVVKDTF 246
Query: 186 MTGLKTEIRLEVRTLQPKGILDTMYRARLVENK--------------------------- 245
M GL IR EVR +PKG+ + M A+LVEN+
Sbjct: 247 MNGLFPWIRAEVRICRPKGLAEMMEFAQLVENREIERNEVNLNNFAGGKYSQQNTVNNRT 306
Query: 246 ------------------------INVALNSAKRKSTVKERSVVVKIVDWTDYNLISKNL 305
N + + K K ++ER V++ I +N IS+ L
Sbjct: 307 PANTNSDSKTNTNFPMRTITLRSSNNAEICTMKVKGKIQEREVIILIDYGATHNFISEKL 366
Query: 306 ATDLKLPLDMYGDYNVVLGCGKKVKGDGICRGVLLQIGNDTYVEDFFPLQMGEDDEVILG 349
L+LP+ G Y V+LG G V+G GIC V +Q+ N E+F PL++G D V+LG
Sbjct: 367 VESLQLPVKETGHYGVILGSGTVVQGKGICENVEIQLSNWKVKEEFLPLELGGVD-VVLG 426
BLAST of Lsi02G006470 vs. NCBI nr
Match:
KAA0056890.1 (aminoacyl-tRNA ligase [Cucumis melo var. makuwa] >TYJ99393.1 aminoacyl-tRNA ligase [Cucumis melo var. makuwa])
HSP 1 Score: 529.6 bits (1363), Expect = 2.0e-146
Identity = 268/345 (77.68%), Postives = 297/345 (86.09%), Query Frame = 0
Query: 7 MENQVEALETKLKKVTD-EVQNI-STMDNNVTALLQQIAQLLTVQQQQQRLPEYA-AHRI 66
MEN VEAL+ KLKKV D EV NI +T DNN+T L+ Q+A LL QQ LP+YA HR+
Sbjct: 1 MENPVEALDAKLKKVEDEEVHNIPTTHDNNLTTLMHQMALLL--NGHQQCLPQYAPTHRM 60
Query: 67 LDLELPMFDGTDSLMWILKMERYFEVHHMDDIAKMMEIVLLCMSGQALAWFRCFRNWGKP 126
+LELPMFDGTD+LMWILKMERYFEVHH+DDIA+MM+ +LLCMSGQALAWFRCF+NWGKP
Sbjct: 61 PNLELPMFDGTDTLMWILKMERYFEVHHIDDIARMMDTILLCMSGQALAWFRCFQNWGKP 120
Query: 127 PESWGEFRGALYMRFGDDHSVCFSFIALQQEGSVRDYCSKFESLGALLPELPEDLVEAKF 186
PESW EFR +LYMRFGD +VC F+ L+QEGSV +YCSKFE+LGALLPEL ++EAKF
Sbjct: 121 PESWDEFRDSLYMRFGDARNVCSKFLGLEQEGSVEEYCSKFETLGALLPELQHVVLEAKF 180
Query: 187 MTGLKTEIRLEVRTLQPKGILDTMYRARLVENKINVALNSAKRKSTVKERSVVVKIVDWT 246
M GLKTEIR +VR L PK ILD M+RARL E K NVALNS KRK TVKERSV+VK+V WT
Sbjct: 181 MNGLKTEIREDVRMLHPKDILDIMHRARLGEKKNNVALNSTKRKGTVKERSVIVKVVSWT 240
Query: 247 DYNLISKNLATDLKLPLDMYGDYNVVLGCGKKVKGDGICRGVLLQIGNDTYVEDFFPLQM 306
DYNLISKNLATDLKL LDMYGDY+VVLG GKKVKGDGICRGVLLQIGNDTYVEDFFPLQM
Sbjct: 241 DYNLISKNLATDLKLKLDMYGDYSVVLGSGKKVKGDGICRGVLLQIGNDTYVEDFFPLQM 300
Query: 307 GEDDEVILGNLWLVALGKMEVDWKHLPMKLKVGKEIVNLRRDPSL 349
GEDDEVILGNLWLVALGKMEVDWK+LPMKLKVGKE V LR+DP L
Sbjct: 301 GEDDEVILGNLWLVALGKMEVDWKNLPMKLKVGKETVTLRKDPFL 343
BLAST of Lsi02G006470 vs. NCBI nr
Match:
KAE8652678.1 (hypothetical protein Csa_013756 [Cucumis sativus])
HSP 1 Score: 525.8 bits (1353), Expect = 2.9e-145
Identity = 270/344 (78.49%), Postives = 290/344 (84.30%), Query Frame = 0
Query: 7 MENQVEALETKLKKVTD-EVQNISTMDNNVTALLQQIAQLLTVQQQQQRLPEYA-AHRIL 66
MEN VEALE KLKKV D EV NI DNN T LL Q+A LL QQRL +YA HR+
Sbjct: 1 MENPVEALEAKLKKVEDEEVHNIPITDNNHTTLLHQMALLLNA--HQQRLLQYAPTHRMP 60
Query: 67 DLELPMFDGTDSLMWILKMERYFEVHHMDDIAKMMEIVLLCMSGQALAWFRCFRNWGKPP 126
+LELPMFDGTD+LMWILKMERYFEVHH+DDIA+MME +LLCMSGQALAWFRCF+NWG PP
Sbjct: 61 NLELPMFDGTDTLMWILKMERYFEVHHIDDIAQMMETILLCMSGQALAWFRCFQNWGNPP 120
Query: 127 ESWGEFRGALYMRFGDDHSVCFSFIALQQEGSVRDYCSKFESLGALLPELPEDLVEAKFM 186
ESWGEFRG+LY RFGD H V FI LQQEGSV +YCSKFESLGALLPEL +VEAKFM
Sbjct: 121 ESWGEFRGSLYKRFGDGHRVLSRFIGLQQEGSVGEYCSKFESLGALLPELSHCVVEAKFM 180
Query: 187 TGLKTEIRLEVRTLQPKGILDTMYRARLVENKINVALNSAKRKSTVKERSVVVKIVDWTD 246
GLKTEIR EVR L +GILD M+RARL E K NVA NS KRK TVKERSVVVK+V WTD
Sbjct: 181 NGLKTEIRGEVRMLDTEGILDIMHRARLAEIKNNVAFNSTKRKGTVKERSVVVKVVSWTD 240
Query: 247 YNLISKNLATDLKLPLDMYGDYNVVLGCGKKVKGDGICRGVLLQIGNDTYVEDFFPLQMG 306
YNLISKNLATDLKL LDMYGDY+VVLG GK VKGDGICRGVLLQIGN+TY EDFFPLQMG
Sbjct: 241 YNLISKNLATDLKLKLDMYGDYSVVLGSGKTVKGDGICRGVLLQIGNETYAEDFFPLQMG 300
Query: 307 EDDEVILGNLWLVALGKMEVDWKHLPMKLKVGKEIVNLRRDPSL 349
EDDEVILGNLWLV LGKMEVDWK+L MKL+VGKEIV LR+DPSL
Sbjct: 301 EDDEVILGNLWLVDLGKMEVDWKNLTMKLEVGKEIVTLRKDPSL 342
BLAST of Lsi02G006470 vs. NCBI nr
Match:
XP_016900762.1 (PREDICTED: uncharacterized protein LOC107991016 [Cucumis melo])
HSP 1 Score: 510.0 bits (1312), Expect = 1.6e-140
Identity = 258/331 (77.95%), Postives = 286/331 (86.40%), Query Frame = 0
Query: 7 MENQVEALETKLKKVTD-EVQNI-STMDNNVTALLQQIAQLLTVQQQQQRLPEYA-AHRI 66
MEN VEAL+ KLKKV D EV NI +T DNN+T L+ Q+A LL QQ LP+YA HR+
Sbjct: 1 MENPVEALDAKLKKVEDEEVHNIPTTHDNNLTTLMHQMALLL--NGHQQCLPQYAPTHRM 60
Query: 67 LDLELPMFDGTDSLMWILKMERYFEVHHMDDIAKMMEIVLLCMSGQALAWFRCFRNWGKP 126
+LELPMFDGTD+LMWILKMERYFEVHH+DDIA+MM+ +LLCMSGQALAWFRCF+NWGKP
Sbjct: 61 PNLELPMFDGTDTLMWILKMERYFEVHHIDDIARMMDTILLCMSGQALAWFRCFQNWGKP 120
Query: 127 PESWGEFRGALYMRFGDDHSVCFSFIALQQEGSVRDYCSKFESLGALLPELPEDLVEAKF 186
PESW EFR +LYMRFGD +VC F+ L+QEGSV +YCSKFE+LGALLPEL ++EAKF
Sbjct: 121 PESWDEFRDSLYMRFGDARNVCSKFLGLEQEGSVEEYCSKFETLGALLPELQHVVLEAKF 180
Query: 187 MTGLKTEIRLEVRTLQPKGILDTMYRARLVENKINVALNSAKRKSTVKERSVVVKIVDWT 246
M GLKTEIR +VR L PK ILD M+RARL E K NVALNS KRK TVKERSV+VK+V WT
Sbjct: 181 MNGLKTEIREDVRMLHPKDILDIMHRARLGEKKNNVALNSTKRKGTVKERSVIVKVVSWT 240
Query: 247 DYNLISKNLATDLKLPLDMYGDYNVVLGCGKKVKGDGICRGVLLQIGNDTYVEDFFPLQM 306
DYNLISKNLATDLKL LDMYGDY+VVLG GKKVKGDGICRGVLLQIGNDTYVEDFFPLQM
Sbjct: 241 DYNLISKNLATDLKLKLDMYGDYSVVLGSGKKVKGDGICRGVLLQIGNDTYVEDFFPLQM 300
Query: 307 GEDDEVILGNLWLVALGKMEVDWKHLPMKLK 335
GEDDEVILGNLWLVALGKMEVDWK+LPMKLK
Sbjct: 301 GEDDEVILGNLWLVALGKMEVDWKNLPMKLK 329
BLAST of Lsi02G006470 vs. NCBI nr
Match:
TYK06549.1 (transposon Tf2-1 polyprotein isoform X1 [Cucumis melo var. makuwa])
HSP 1 Score: 166.0 bits (419), Expect = 5.8e-37
Identity = 107/336 (31.85%), Postives = 163/336 (48.51%), Query Frame = 0
Query: 66 LELPMFDGTDSLMWILKMERYFEVHHMDDIAKMMEIVLLCMSGQALAWFRCFRNWGKPPE 125
+E+P+F G D W+ + ERYF++H + D KM+ + + G AL W+R K
Sbjct: 127 VEMPVFAGEDPDSWLFRAERYFQIHKLSDSEKML-VSTISFDGPALNWYRSQEEREK-FT 186
Query: 126 SWGEFRGALYMRF--GDDHSVCFSFIALQQEGSVRDYCSKFESLGALLPELPEDLVEAKF 185
SW + L +RF D V F+ ++QE +V DY + F+ L A L ++P+ +V+ F
Sbjct: 187 SWANLKERLLVRFRSSRDEKVLERFLRVKQESTVDDYRNLFDKLVAPLSDVPDPVVKDTF 246
Query: 186 MTGLKTEIRLEVRTLQPKGILDTMYRARLVENK--------------------------- 245
M GL IR EVR +PKG+ + M A+LVEN+
Sbjct: 247 MNGLFPWIRAEVRICRPKGLAEMMEFAQLVENREIERNEVNLNNFAGGKYSQQNTVNNRT 306
Query: 246 ------------------------INVALNSAKRKSTVKERSVVVKIVDWTDYNLISKNL 305
N + + K K ++ER V++ I +N IS+ L
Sbjct: 307 PANTNSDSKTNTNFPMRTITLRSSNNAEICTMKVKGKIQEREVIILIDYGATHNFISEKL 366
Query: 306 ATDLKLPLDMYGDYNVVLGCGKKVKGDGICRGVLLQIGNDTYVEDFFPLQMGEDDEVILG 349
L+LP+ G Y V+LG G V+G GIC V +Q+ N E+F PL++G D V+LG
Sbjct: 367 VESLQLPVKETGHYGVILGSGTVVQGKGICENVEIQLSNWKVKEEFLPLELGGVD-VVLG 426
BLAST of Lsi02G006470 vs. NCBI nr
Match:
KAA0037097.1 (Transposon Ty3-G Gag-Pol polyprotein [Cucumis melo var. makuwa])
HSP 1 Score: 164.5 bits (415), Expect = 1.7e-36
Identity = 107/336 (31.85%), Postives = 162/336 (48.21%), Query Frame = 0
Query: 66 LELPMFDGTDSLMWILKMERYFEVHHMDDIAKMMEIVLLCMSGQALAWFRCFRNWGKPPE 125
+E+P+F G D W+ + ERYF++H + D KM+ + + G AL W+R K
Sbjct: 127 VEMPVFAGEDPDSWLFRAERYFQIHKLSDSEKML-VSTISFDGPALNWYRSQEEREK-FT 186
Query: 126 SWGEFRGALYMRF--GDDHSVCFSFIALQQEGSVRDYCSKFESLGALLPELPEDLVEAKF 185
SW + L +RF D V F+ ++QE +V DY + F+ L A L ++P+ +V+ F
Sbjct: 187 SWANLKERLLVRFRSSRDEKVLERFLRVKQESTVDDYRNLFDKLVAPLSDVPDPVVKDTF 246
Query: 186 MTGLKTEIRLEVRTLQPKGILDTMYRARLVENK--------------------------- 245
M GL IR EVR +PKG+ + M A+LVEN+
Sbjct: 247 MNGLFPWIRAEVRICRPKGLAEMMEFAQLVENREIERNEVNLNNFAGGKYSQQNTVNNRT 306
Query: 246 ------------------------INVALNSAKRKSTVKERSVVVKIVDWTDYNLISKNL 305
N + + K K ++ER V++ I +N IS+ L
Sbjct: 307 PANTNSDSKTNTNFPMRTITLRSSNNAEICTMKVKGKIQEREVIILIDYGATHNFISEKL 366
Query: 306 ATDLKLPLDMYGDYNVVLGCGKKVKGDGICRGVLLQIGNDTYVEDFFPLQMGEDDEVILG 349
L+LP+ G Y V+LG G V+G GIC V +Q+ N E+F PL++G D V+LG
Sbjct: 367 VESLQLPVKETGHYGVILGSGTVVQGKGICENVEIQLSNWKVKEEFLPLELGGVD-VVLG 426
BLAST of Lsi02G006470 vs. TAIR 10
Match:
AT3G29750.1 (Eukaryotic aspartyl protease family protein )
HSP 1 Score: 79.7 bits (195), Expect = 5.1e-15
Identity = 67/240 (27.92%), Postives = 102/240 (42.50%), Query Frame = 0
Query: 148 FIALQQEGSVRDYCSKFESLGALLPELPEDLVEAKFMTGLKTEIRLEVRTLQPKGILDTM 207
+ +QQEGSVRDY +FE+L LP E F+ GL+ ++ VR L+P GI
Sbjct: 9 YSGIQQEGSVRDYRERFEALCLRSVTLPGQGFEEMFLQGLQPSLQTAVRELKPNGI--NS 68
Query: 208 YRAR--------LVENKINVALNSAKRKSTVKE--------------------------- 267
Y++R LV+ K++V K+K + E
Sbjct: 69 YQSRQAELMSLTLVQAKLDVV---KKKKGVINELEELEQDSYTLRQGMEQLVIDLTRNKG 128
Query: 268 ---------RSVVVKIVDWTDYNLISKNLATDLKLPLDMYGDYNVVLGCGKKVKGDGICR 327
VVV I N I LA LKLP + +V+LG + ++ G C
Sbjct: 129 MRFYGFILDHKVVVAIDSGATDNFILVELAFSLKLPTSITNQASVLLGQRQCIQSVGTCL 188
Query: 328 GVLLQIGNDTYVEDFFPLQMGEDD-EVILGNLWLVALGKMEVDWKHLPMKLKVGKEIVNL 343
G+ L + E+F L + + D +VILG WL LG+ V+W++ ++ + L
Sbjct: 189 GIRLWVQEVEITENFLLLDLAKTDVDVILGYEWLSKLGETMVNWQNQDFSFSHNQQWITL 243
BLAST of Lsi02G006470 vs. TAIR 10
Match:
AT3G42723.1 (aminoacyl-tRNA ligases;ATP binding;nucleotide binding )
HSP 1 Score: 66.2 bits (160), Expect = 5.8e-11
Identity = 75/280 (26.79%), Postives = 122/280 (43.57%), Query Frame = 0
Query: 84 ERYFEVHHMDDIAKMMEIVLLCMSGQALAWFRCFRNWGK-PPESWGEFRGALYMRFGDDH 143
E YF +++ + + ++IV + G W + W K P SW EF+ +
Sbjct: 279 ENYFGENNIPE-QERLQIVYSNLEGDIGQWIK--HLWKKNSPTSWKEFKCMMARETKTTM 338
Query: 144 SVCFS--FIALQQEGSVRDYCSKFESLGALLPELPEDLVEAKFMTGLKTEIRLEVRTLQP 203
V + +QQEGSVR+Y +FE+L LP +EA F+ GL+ ++ VR L+P
Sbjct: 339 KVNHQPHYSGIQQEGSVREYRERFEALCLGSVILPGQGLEALFLQGLQPSLQTAVRELKP 398
Query: 204 KGILDTMYRARLVENK---------INVALNSAKRKSTVKE-RSVVVKIVDWTDY----- 263
GI+ M A+ +E ++V +T E RS+V+ D
Sbjct: 399 NGIVQMMDTAQWLEESNSLMVYGSGLSVQTEPKVYPTTQAELRSMVLMGYMREDLKDTPR 458
Query: 264 --NLISKNLATDLKLP---------LDMYG-----DYNVVLGCGKKVKGDGICRGVLLQI 323
N + L + +LP + YG + + VK C+ + L+I
Sbjct: 459 PANEDTGTLKQEHELPGTEVATCRGMRFYGYILQQEVSFSYRLASDVKRS--CQEISLRI 518
Query: 324 GNDTYVEDFFPLQMGED-DEVILGNLWLVALGKMEVDWKH 329
+ VED+ + D +VILG WL LG+ EV+W++
Sbjct: 519 NDIDIVEDYCVWDLKRDVVDVILGYEWLSKLGETEVNWQN 553
BLAST of Lsi02G006470 vs. TAIR 10
Match:
AT1G67020.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: leaf; Has 72 Blast hits to 72 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 72; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )
HSP 1 Score: 44.7 bits (104), Expect = 1.8e-04
Identity = 23/61 (37.70%), Postives = 34/61 (55.74%), Query Frame = 0
Query: 66 LELPMFDGTDSLMWILKMERYFEVHHMDDIAKMMEIVLLCMSGQALAWFRC------FRN 121
+E+P+FDG+ W K+ER+F V D K +++V L + G AL WF FR+
Sbjct: 110 IEMPVFDGSGVYEWFSKVERFFRVGRYQDSDK-LDLVALSLEGVALKWFLREMSTLEFRD 169
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5D3BJD9 | 9.6e-147 | 77.68 | Aminoacyl-tRNA ligase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold24... | [more] |
A0A1S4DXQ7 | 7.9e-141 | 77.95 | uncharacterized protein LOC107991016 OS=Cucumis melo OX=3656 GN=LOC107991016 PE=... | [more] |
A0A0A0LUB3 | 2.0e-83 | 72.53 | Retrotrans_gag domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G064... | [more] |
A0A5D3C860 | 2.8e-37 | 31.85 | Transposon Tf2-1 polyprotein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 G... | [more] |
A0A5A7T6B1 | 8.1e-37 | 31.85 | Transposon Ty3-G Gag-Pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E... | [more] |
Match Name | E-value | Identity | Description | |
KAA0056890.1 | 2.0e-146 | 77.68 | aminoacyl-tRNA ligase [Cucumis melo var. makuwa] >TYJ99393.1 aminoacyl-tRNA liga... | [more] |
KAE8652678.1 | 2.9e-145 | 78.49 | hypothetical protein Csa_013756 [Cucumis sativus] | [more] |
XP_016900762.1 | 1.6e-140 | 77.95 | PREDICTED: uncharacterized protein LOC107991016 [Cucumis melo] | [more] |
TYK06549.1 | 5.8e-37 | 31.85 | transposon Tf2-1 polyprotein isoform X1 [Cucumis melo var. makuwa] | [more] |
KAA0037097.1 | 1.7e-36 | 31.85 | Transposon Ty3-G Gag-Pol polyprotein [Cucumis melo var. makuwa] | [more] |
Match Name | E-value | Identity | Description | |
AT3G29750.1 | 5.1e-15 | 27.92 | Eukaryotic aspartyl protease family protein | [more] |
AT3G42723.1 | 5.8e-11 | 26.79 | aminoacyl-tRNA ligases;ATP binding;nucleotide binding | [more] |
AT1G67020.1 | 1.8e-04 | 37.70 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... | [more] |