Lsi01G011650 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.AAAAAACTAATTGTTAATTAAGTTTAAAGAAGGAATGGAATAAATTGGAGTTGTATAAATTTGAAAGGAAGCACACAAAGCAAAAGCATTCCATAAGTAATAACTTTGTGGGAAAAAGTTTGTGTATTGAAAGTAAGTTAAGAAAATGTGTTCTCAGTTGCTCGGCAGTTATAGTCCATGTGAAGATCCCGAAGGCCCGCACGTAAAAGAAGTAGCAGAATGGGCAGTAGCAGAGTACAACAAAGGCGGACATTGCTTGACATTGATTCATGTGTTAAGTTGTGAGTCGCAGGTGGTGGCCGGAGTCAACTACCGCCTTGTCTTGTTAGTTAAGGATGAAAAAAATCATGAGAAAGTCTACGAGACTGTTGTGTGGGAGAAGATATGGGAGAATTTTAGGAAGCTCATTTACTTTAAACCTTACAAGGTATGCTTTTTCTTATAGCACTTACATGCTTTCTTTTGCAACCCTTTTCAAATTTGTTATTTGTATCTATATTTGGTTACTTAATGAAGTGTTCTCTAACTGATGAAACAAAATAAAAATCATAAATTGAGTTTGGTAAAGTTGAGTCTATTTTATTCAAATTAAAAATAGGATGATATATATTAGTTTGTACTCGGATAGTAGAAGCATGCATGACATATATAGTTGAATTTTGGGATTCAAAATTTCTTTTGTCTTAATAAAGCTATTTTTCAGTCTTAATGATCATTTAAGAAATTAGTACGCAAAAAGTGGAATAAAAATTGTAGTAGTACAAATTTGAAAATCATTCCATATTTGGTTTAACTTTTCAAATGTTTACTTTTGAAATAAGTTATTTTAAGAATAATTCAAATATTTGGTAACGGCTTAAAATAGCTTTTGAAATACTCTCAAACTATGTTTCAAACATTTTTTTTTAATCAAAAAAGAGTTTAAATAATAATGATTTTTTTTAAAAAAAATATTTTTTCTAGACAATCCAAATGTCTAAGAGGCTGTTTGGGGGACAGTAATTGGATGGGTTTAGGTTGTAACGTAATTTAAAAATCTACGTTTGAATTAAACATTTTAGGCTCGATTTGTAATACTAAACTCATTCCGTTCTCACAGTTCTCAACCTAACTCTCTTTCCCACCGTTTTCATGCTTCACGATCTCATTTTCGTTATGTCATAAATTCCTCACACATTCCAATACCCCTCAGATTTCTAATAATTTGATAACATTTCAGCCCCAAACAATCCCTAATTGTGTATATTGAAAGTAAGGAAAATGCGTTCTCAGGTAGTTGGCGGTTATGGTCCATGTAAGGATCCTGAAGGCCCACATGTGAAAGAAATAGCAGAATGGGCAGTAGCAGAGTACAACAAAGGCGGACATTGCTTGACATTGATTAGTGTGTTGAAATGCGAGTCGCAGGTGGTGGCCGGAGTCAACTACCGCCTTGTCTTGTTGGCTAAGGATGATAAAAATCATGAGGGAAAATATGAGGCTGTTGTGTGGGAGAAGATATGGGAGCATTTCAGGAAGCTCATTAGCTTTAAACCTCTCTTGTTATGTTGA AAAAAACTAATTGTTAATTAAGTTTAAAGAAGGAATGGAATAAATTGGAGTTGTATAAATTTGAAAGGAAGCACACAAAGCAAAAGCATTCCATAAGTAATAACTTTGTGGGAAAAAGTTTGTGTATTGAAAGTAAGTTAAGAAAATGTGTTCTCAGTTGCTCGGCAGTTATAGTCCATGTGAAGATCCCGAAGGCCCGCACGTAAAAGAAGTAGCAGAATGGGCAGTAGCAGAGTACAACAAAGGCGGACATTGCTTGACATTGATTCATGTGTTAAGTTGTGAGTCGCAGGTGGTGGCCGGAGTCAACTACCGCCTTGTCTTGTTAGTTAAGGATGAAAAAAATCATGAGAAAGTCTACGAGACTGTTGTGTGGGAGAAGATATGGGAGAATTTTAGGAAGCTCATTTACTTTAAACCTTACAAGGATCCTGAAGGCCCACATGTGAAAGAAATAGCAGAATGGGCAGTAGCAGAGTACAACAAAGGCGGACATTGCTTGACATTGATTAGTGTGTTGAAATGCGAGTCGCAGGTGGTGGCCGGAGTCAACTACCGCCTTGTCTTGTTGGCTAAGGATGATAAAAATCATGAGGGAAAATATGAGGCTGTTGTGTGGGAGAAGATATGGGAGCATTTCAGGAAGCTCATTAGCTTTAAACCTCTCTTGTTATGTTGA ATGTGTTCTCAGTTGCTCGGCAGTTATAGTCCATGTGAAGATCCCGAAGGCCCGCACGTAAAAGAAGTAGCAGAATGGGCAGTAGCAGAGTACAACAAAGGCGGACATTGCTTGACATTGATTCATGTGTTAAGTTGTGAGTCGCAGGTGGTGGCCGGAGTCAACTACCGCCTTGTCTTGTTAGTTAAGGATGAAAAAAATCATGAGAAAGTCTACGAGACTGTTGTGTGGGAGAAGATATGGGAGAATTTTAGGAAGCTCATTTACTTTAAACCTTACAAGGATCCTGAAGGCCCACATGTGAAAGAAATAGCAGAATGGGCAGTAGCAGAGTACAACAAAGGCGGACATTGCTTGACATTGATTAGTGTGTTGAAATGCGAGTCGCAGGTGGTGGCCGGAGTCAACTACCGCCTTGTCTTGTTGGCTAAGGATGATAAAAATCATGAGGGAAAATATGAGGCTGTTGTGTGGGAGAAGATATGGGAGCATTTCAGGAAGCTCATTAGCTTTAAACCTCTCTTGTTATGTTGA MCSQLLGSYSPCEDPEGPHVKEVAEWAVAEYNKGGHCLTLIHVLSCESQVVAGVNYRLVLLVKDEKNHEKVYETVVWEKIWENFRKLIYFKPYKDPEGPHVKEIAEWAVAEYNKGGHCLTLISVLKCESQVVAGVNYRLVLLAKDDKNHEGKYEAVVWEKIWEHFRKLISFKPLLLC Homology
BLAST of Lsi01G011650 vs. ExPASy Swiss-Prot
Match: P37842 (Multicystatin OS=Solanum tuberosum OX=4113 PE=1 SV=1) HSP 1 Score: 101.7 bits (252), Expect = 8.9e-21 Identity = 58/185 (31.35%), Postives = 95/185 (51.35%), Query Frame = 0
BLAST of Lsi01G011650 vs. ExPASy Swiss-Prot
Match: P86472 (Cysteine proteinase inhibitor 1 OS=Actinidia chinensis var. chinensis OX=1590841 GN=CYT1 PE=1 SV=2) HSP 1 Score: 72.8 bits (177), Expect = 4.4e-12 Identity = 39/84 (46.43%), Postives = 57/84 (67.86%), Query Frame = 0
BLAST of Lsi01G011650 vs. ExPASy Swiss-Prot
Match: Q6TPK4 (Cysteine proteinase inhibitor 1 OS=Actinidia deliciosa OX=3627 PE=1 SV=1) HSP 1 Score: 72.8 bits (177), Expect = 4.4e-12 Identity = 42/92 (45.65%), Postives = 60/92 (65.22%), Query Frame = 0
BLAST of Lsi01G011650 vs. ExPASy Swiss-Prot
Match: Q41916 (Cysteine proteinase inhibitor 5 OS=Arabidopsis thaliana OX=3702 GN=CYS5 PE=2 SV=2) HSP 1 Score: 69.7 bits (169), Expect = 3.7e-11 Identity = 37/88 (42.05%), Postives = 50/88 (56.82%), Query Frame = 0
BLAST of Lsi01G011650 vs. ExPASy Swiss-Prot
Match: Q10Q47 (Putative cysteine proteinase inhibitor 7 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0210100 PE=3 SV=1) HSP 1 Score: 69.3 bits (168), Expect = 4.9e-11 Identity = 40/83 (48.19%), Postives = 52/83 (62.65%), Query Frame = 0
BLAST of Lsi01G011650 vs. ExPASy TrEMBL
Match: A0A4S8KBT4 (Uncharacterized protein OS=Musa balbisiana OX=52838 GN=C4D60_Mb04t13670 PE=3 SV=1) HSP 1 Score: 161.0 bits (406), Expect = 4.6e-36 Identity = 95/180 (52.78%), Postives = 118/180 (65.56%), Query Frame = 0
BLAST of Lsi01G011650 vs. ExPASy TrEMBL
Match: A0A426WY30 (Uncharacterized protein OS=Ensete ventricosum OX=4639 GN=B296_00051059 PE=3 SV=1) HSP 1 Score: 157.1 bits (396), Expect = 6.6e-35 Identity = 94/177 (53.11%), Postives = 116/177 (65.54%), Query Frame = 0
BLAST of Lsi01G011650 vs. ExPASy TrEMBL
Match: A0A444FRQ3 (Uncharacterized protein OS=Ensete ventricosum OX=4639 GN=GW17_00010346 PE=3 SV=1) HSP 1 Score: 156.8 bits (395), Expect = 8.6e-35 Identity = 94/177 (53.11%), Postives = 116/177 (65.54%), Query Frame = 0
BLAST of Lsi01G011650 vs. ExPASy TrEMBL
Match: A0A426Z5E1 (Uncharacterized protein OS=Ensete ventricosum OX=4639 GN=B296_00014443 PE=3 SV=1) HSP 1 Score: 156.4 bits (394), Expect = 1.1e-34 Identity = 94/181 (51.93%), Postives = 117/181 (64.64%), Query Frame = 0
BLAST of Lsi01G011650 vs. ExPASy TrEMBL
Match: V4T622 (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10002632mg PE=4 SV=1) HSP 1 Score: 156.0 bits (393), Expect = 1.5e-34 Identity = 88/182 (48.35%), Postives = 117/182 (64.29%), Query Frame = 0
BLAST of Lsi01G011650 vs. NCBI nr
Match: KAE8647458.1 (hypothetical protein Csa_004041 [Cucumis sativus]) HSP 1 Score: 167.2 bits (422), Expect = 1.3e-37 Identity = 87/178 (48.88%), Postives = 119/178 (66.85%), Query Frame = 0
BLAST of Lsi01G011650 vs. NCBI nr
Match: THU72580.1 (hypothetical protein C4D60_Mb04t13670 [Musa balbisiana]) HSP 1 Score: 161.0 bits (406), Expect = 9.4e-36 Identity = 95/180 (52.78%), Postives = 118/180 (65.56%), Query Frame = 0
BLAST of Lsi01G011650 vs. NCBI nr
Match: RRT32118.1 (hypothetical protein B296_00051059 [Ensete ventricosum]) HSP 1 Score: 157.1 bits (396), Expect = 1.4e-34 Identity = 94/177 (53.11%), Postives = 116/177 (65.54%), Query Frame = 0
BLAST of Lsi01G011650 vs. NCBI nr
Match: RWW25321.1 (hypothetical protein GW17_00010346 [Ensete ventricosum] >RWW36179.1 hypothetical protein BHE74_00058818 [Ensete ventricosum] >RZS28419.1 hypothetical protein BHM03_00062003 [Ensete ventricosum]) HSP 1 Score: 156.8 bits (395), Expect = 1.8e-34 Identity = 94/177 (53.11%), Postives = 116/177 (65.54%), Query Frame = 0
BLAST of Lsi01G011650 vs. NCBI nr
Match: XP_009396392.1 (PREDICTED: cysteine proteinase inhibitor 1-like [Musa acuminata subsp. malaccensis] >CAG1842117.1 unnamed protein product [Musa acuminata subsp. malaccensis]) HSP 1 Score: 156.8 bits (395), Expect = 1.8e-34 Identity = 94/180 (52.22%), Postives = 117/180 (65.00%), Query Frame = 0
BLAST of Lsi01G011650 vs. TAIR 10
Match: AT5G47550.1 (Cystatin/monellin superfamily protein ) HSP 1 Score: 69.7 bits (169), Expect = 2.7e-12 Identity = 37/88 (42.05%), Postives = 50/88 (56.82%), Query Frame = 0
BLAST of Lsi01G011650 vs. TAIR 10
Match: AT4G16500.1 (Cystatin/monellin superfamily protein ) HSP 1 Score: 63.5 bits (153), Expect = 1.9e-10 Identity = 35/85 (41.18%), Postives = 49/85 (57.65%), Query Frame = 0
BLAST of Lsi01G011650 vs. TAIR 10
Match: AT5G05110.1 (Cystatin/monellin family protein ) HSP 1 Score: 55.1 bits (131), Expect = 6.8e-08 Identity = 36/89 (40.45%), Postives = 50/89 (56.18%), Query Frame = 0
BLAST of Lsi01G011650 vs. TAIR 10
Match: AT3G12490.2 (cystatin B ) HSP 1 Score: 52.0 bits (123), Expect = 5.7e-07 Identity = 31/77 (40.26%), Postives = 44/77 (57.14%), Query Frame = 0
BLAST of Lsi01G011650 vs. TAIR 10
Match: AT3G12490.1 (cystatin B ) HSP 1 Score: 52.0 bits (123), Expect = 5.7e-07 Identity = 31/77 (40.26%), Postives = 44/77 (57.14%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|