Lcy09g002450 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CGCTAGGTCACCTTCTGGTCCTCTTCATATAAAAGGATCACTACTGCCCATTCATAAACCCTAATTCAGCCGACGAGCTCTCTGATTCTCTCTGGTTCGCTCGTCCATCTGAAAGACTAGAACCATGGTAACTGATCCTTCAGCCCTCTGTTTTGATCCTTCGTGTTCGTCTAGTATTTTTCTTTGACAGTTTCTCCTTCGGTTCAGACTTTCAAGCGCAGGAATGGTGGACGCAACAAGCATGGACGCGGACACGTGAAATTTATCCGCTGCTCCAACTGCGGCAAATGCTGCCCCAAGGTACCTAGTGTTTTTTCCTATTTCGCCTTGATATGTCCTGTCGACGTTGATGAATAGGTTTAGGCTTACCGTTCTATTGCTTTCTTTGATCTGTAGCGGCTAGACAATGTATAACCATCTGAAATTTTCACGCGACGCCTGTTCAATATAGTTGCTACTGATTTCGTCCTATCATTGAACTAAGATACGAGTAATTCACCATCGAGTTTTTATTTCCCTGTTCTCTTGTTGGCATTCCTGGTCCTTTTGTGTCATATAGGCTAAGATTTTATTACATACTTGCAATACTGTGTGTGATTTTGGCATACTGTTCGGTATAGAGTTTCTAATGTTGGGATTTCTTATTGCCGCGAATAGGACAAGGCCATCAAGAGGTTCCTTGTCAGGAACATTGTGGAGCAGGCAGCTGTTAGGGATGTCCAGGAAGCCTGTGTTTATGATCGTATGATCCTTTCTTGAGCGCATTCTTTCTATGTCTTCCGGCTTCCGCCAATGCAACTTGAATGATAATCTCAATGTTTGTTTTCGGTGCAGAATACACTCTTCCTAAGCTATATGCTAAGATGCAGTACTGTGTTTCCTGTGCTATCCACTCTCACGTTGTGAGGGTTCGATCACGCACTGACAGGAGGAACCGTGAGCCTCCACAGCGCTTCATTAGACGCAGGGTATATTTTGATTCATCTTATTGTTCTTTATTGTTCTTTCATTTGATTCACTTTCTAGGGTTGCGATGATTAATTATATATTGTGTCTTTCTAAAAAAAGTACATAAGCCCGTGTCTGGCATTTTCCTTTTTCTCTTCTATTATTCTAGCTTTCGCTGATGCATAATTAGCTTCTCATTTATAACTGTTTTTGAATTGATTCTTGAGCTATTTAATAACTCCCGTTGCCCAGTGTTATATGGCTAGTTCACGAACCTACCCGTCTTTATTCTGCCATATATGTCTTACATTTTCAATTCAATCTCCGTCTTTATTGCTAATCATGATGAATCTAGCCTTGAAGATGTCCATACTCATGTGTAATGACTTGTCATTTTCGGGTCATGAGTCCTCTAGTACACATTCATAGTGCTGGCCCTCTGGTTTGTCTTTCAAATAAGTCTCAATTAGAACTTGACTTGAAGGTTACTATTCTGCTTACTTGGTATTTGATGGTACTTTAGAAGATGAGGTTGCTGTTTTGTTAGTTTAGTTATATGGATAAGTTATGTTCGTGCGTAGCTGCTCACTCAATTCTGAATTCGTTTCTATTGTTTTCTCCACTTACAAATCCGTTTCTATTGTTGGTGCTTAGTTTTTTGTTTGAATTTGGTCAATGTTTTCTCAGGATGATCTGCCAAAGCCTGGACAGCCAGGACAGGCCCCTCGTGTTGGAGCTGGAACTGCACCCCGTGCTTGAAGGAACCTCTTATATGCTATTTAATTTTCTCATGGTTTCTCAAATTTCTCGGACTTCAATTCCATTTAGGATTTTTCAATATATTTTGAGGGTTCTGTTTTGAGTATCGAATTATGCTGTACTTCTGAAATCTGATCAATTTTTGGTTTAACAGGATCTACTTGAACATTTTGATTGTTCTCGTCATGACTCAATGATCTATCTATCCTGTCTCTCAAATCTCTTTTTACTCCTAGTACACAATTCAGAACTAAGTTCAGGGTTTAAAAAATAAAAGTAACACGTGGATCTTGTAGCGTATCAAATGTTTTGCTGGGTGTATCTTTGTGAGAGCCCCCCACTCCACACAATTTAAAGCTATCACGGAATAACA CGCTAGGTCACCTTCTGGTCCTCTTCATATAAAAGGATCACTACTGCCCATTCATAAACCCTAATTCAGCCGACGAGCTCTCTGATTCTCTCTGGTTCGCTCGTCCATCTGAAAGACTAGAACCATGACTTTCAAGCGCAGGAATGGTGGACGCAACAAGCATGGACGCGGACACGTGAAATTTATCCGCTGCTCCAACTGCGGCAAATGCTGCCCCAAGGACAAGGCCATCAAGAGGTTCCTTGTCAGGAACATTGTGGAGCAGGCAGCTGTTAGGGATGTCCAGGAAGCCTGTGTTTATGATCAATACACTCTTCCTAAGCTATATGCTAAGATGCAGTACTGTGTTTCCTGTGCTATCCACTCTCACGTTGTGAGGGTTCGATCACGCACTGACAGGAGGAACCGTGAGCCTCCACAGCGCTTCATTAGACGCAGGGATGATCTGCCAAAGCCTGGACAGCCAGGACAGGCCCCTCGTGTTGGAGCTGGAACTGCACCCCGTGCTTGAAGGAACCTCTTATATGCTATTTAATTTTCTCATGGTTTCTCAAATTTCTCGGACTTCAATTCCATTTAGGATTTTTCAATATATTTTGAGGGTTCTGTTTTGAGTATCGAATTATGCTGTACTTCTGAAATCTGATCAATTTTTGGTTTAACAGGATCTACTTGAACATTTTGATTGTTCTCGTCATGACTCAATGATCTATCTATCCTGTCTCTCAAATCTCTTTTTACTCCTAGTACACAATTCAGAACTAAGTTCAGGGTTTAAAAAATAAAAGTAACACGTGGATCTTGTAGCGTATCAAATGTTTTGCTGGGTGTATCTTTGTGAGAGCCCCCCACTCCACACAATTTAAAGCTATCACGGAATAACA ATGACTTTCAAGCGCAGGAATGGTGGACGCAACAAGCATGGACGCGGACACGTGAAATTTATCCGCTGCTCCAACTGCGGCAAATGCTGCCCCAAGGACAAGGCCATCAAGAGGTTCCTTGTCAGGAACATTGTGGAGCAGGCAGCTGTTAGGGATGTCCAGGAAGCCTGTGTTTATGATCAATACACTCTTCCTAAGCTATATGCTAAGATGCAGTACTGTGTTTCCTGTGCTATCCACTCTCACGTTGTGAGGGTTCGATCACGCACTGACAGGAGGAACCGTGAGCCTCCACAGCGCTTCATTAGACGCAGGGATGATCTGCCAAAGCCTGGACAGCCAGGACAGGCCCCTCGTGTTGGAGCTGGAACTGCACCCCGTGCTTGA MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNREPPQRFIRRRDDLPKPGQPGQAPRVGAGTAPRA Homology
BLAST of Lcy09g002450 vs. ExPASy Swiss-Prot
Match: Q9LYK9 (40S ribosomal protein S26-3 OS=Arabidopsis thaliana OX=3702 GN=RPS26C PE=2 SV=1) HSP 1 Score: 214.9 bits (546), Expect = 5.2e-55 Identity = 108/130 (83.08%), Postives = 114/130 (87.69%), Query Frame = 0
BLAST of Lcy09g002450 vs. ExPASy Swiss-Prot
Match: P49206 (40S ribosomal protein S26-1 OS=Arabidopsis thaliana OX=3702 GN=RPS26A PE=2 SV=2) HSP 1 Score: 214.2 bits (544), Expect = 8.9e-55 Identity = 107/130 (82.31%), Postives = 113/130 (86.92%), Query Frame = 0
BLAST of Lcy09g002450 vs. ExPASy Swiss-Prot
Match: Q8LPJ7 (40S ribosomal protein S26-2 OS=Arabidopsis thaliana OX=3702 GN=RPS26B PE=2 SV=2) HSP 1 Score: 212.2 bits (539), Expect = 3.4e-54 Identity = 106/129 (82.17%), Postives = 112/129 (86.82%), Query Frame = 0
BLAST of Lcy09g002450 vs. ExPASy Swiss-Prot
Match: P49216 (40S ribosomal protein S26 OS=Oryza sativa subsp. japonica OX=39947 GN=RPS26 PE=2 SV=2) HSP 1 Score: 193.7 bits (491), Expect = 1.2e-48 Identity = 96/127 (75.59%), Postives = 109/127 (85.83%), Query Frame = 0
BLAST of Lcy09g002450 vs. ExPASy Swiss-Prot
Match: O45499 (40S ribosomal protein S26 OS=Caenorhabditis elegans OX=6239 GN=rps-26 PE=3 SV=1) HSP 1 Score: 159.1 bits (401), Expect = 3.4e-38 Identity = 79/118 (66.95%), Postives = 91/118 (77.12%), Query Frame = 0
BLAST of Lcy09g002450 vs. ExPASy TrEMBL
Match: A0A6J1BXZ8 (40S ribosomal protein S26 OS=Momordica charantia OX=3673 GN=LOC111006736 PE=3 SV=1) HSP 1 Score: 256.9 bits (655), Expect = 4.4e-65 Identity = 124/127 (97.64%), Postives = 125/127 (98.43%), Query Frame = 0
BLAST of Lcy09g002450 vs. ExPASy TrEMBL
Match: A0A5A7UA01 (40S ribosomal protein S26 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold409G001770 PE=3 SV=1) HSP 1 Score: 253.4 bits (646), Expect = 4.9e-64 Identity = 123/126 (97.62%), Postives = 123/126 (97.62%), Query Frame = 0
BLAST of Lcy09g002450 vs. ExPASy TrEMBL
Match: A0A1S3C4P8 (40S ribosomal protein S26 OS=Cucumis melo OX=3656 GN=LOC103496615 PE=3 SV=1) HSP 1 Score: 253.4 bits (646), Expect = 4.9e-64 Identity = 123/126 (97.62%), Postives = 123/126 (97.62%), Query Frame = 0
BLAST of Lcy09g002450 vs. ExPASy TrEMBL
Match: A0A6J1JRW7 (40S ribosomal protein S26 OS=Cucurbita maxima OX=3661 GN=LOC111487002 PE=3 SV=1) HSP 1 Score: 251.9 bits (642), Expect = 1.4e-63 Identity = 121/123 (98.37%), Postives = 122/123 (99.19%), Query Frame = 0
BLAST of Lcy09g002450 vs. ExPASy TrEMBL
Match: A0A6J1E9V7 (40S ribosomal protein S26 OS=Cucurbita moschata OX=3662 GN=LOC111431192 PE=3 SV=1) HSP 1 Score: 251.9 bits (642), Expect = 1.4e-63 Identity = 121/123 (98.37%), Postives = 122/123 (99.19%), Query Frame = 0
BLAST of Lcy09g002450 vs. NCBI nr
Match: XP_022134511.1 (40S ribosomal protein S26-1-like [Momordica charantia]) HSP 1 Score: 256.9 bits (655), Expect = 9.1e-65 Identity = 124/127 (97.64%), Postives = 125/127 (98.43%), Query Frame = 0
BLAST of Lcy09g002450 vs. NCBI nr
Match: XP_038884330.1 (40S ribosomal protein S26-3-like [Benincasa hispida] >XP_038884435.1 40S ribosomal protein S26-3-like [Benincasa hispida]) HSP 1 Score: 255.8 bits (652), Expect = 2.0e-64 Identity = 124/126 (98.41%), Postives = 124/126 (98.41%), Query Frame = 0
BLAST of Lcy09g002450 vs. NCBI nr
Match: XP_008456772.1 (PREDICTED: 40S ribosomal protein S26-3-like [Cucumis melo] >KAA0052010.1 40S ribosomal protein S26-3-like [Cucumis melo var. makuwa] >TYK04549.1 40S ribosomal protein S26-3-like [Cucumis melo var. makuwa]) HSP 1 Score: 253.4 bits (646), Expect = 1.0e-63 Identity = 123/126 (97.62%), Postives = 123/126 (97.62%), Query Frame = 0
BLAST of Lcy09g002450 vs. NCBI nr
Match: XP_022923523.1 (40S ribosomal protein S26-3-like [Cucurbita moschata] >XP_022989973.1 40S ribosomal protein S26-3-like [Cucurbita maxima] >XP_023529343.1 40S ribosomal protein S26-3-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 251.9 bits (642), Expect = 2.9e-63 Identity = 121/123 (98.37%), Postives = 122/123 (99.19%), Query Frame = 0
BLAST of Lcy09g002450 vs. NCBI nr
Match: KAG6602587.1 (40S ribosomal protein S26-1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 249.6 bits (636), Expect = 1.5e-62 Identity = 120/123 (97.56%), Postives = 121/123 (98.37%), Query Frame = 0
BLAST of Lcy09g002450 vs. TAIR 10
Match: AT3G56340.1 (Ribosomal protein S26e family protein ) HSP 1 Score: 214.9 bits (546), Expect = 3.7e-56 Identity = 108/130 (83.08%), Postives = 114/130 (87.69%), Query Frame = 0
BLAST of Lcy09g002450 vs. TAIR 10
Match: AT2G40590.1 (Ribosomal protein S26e family protein ) HSP 1 Score: 214.2 bits (544), Expect = 6.3e-56 Identity = 107/130 (82.31%), Postives = 113/130 (86.92%), Query Frame = 0
BLAST of Lcy09g002450 vs. TAIR 10
Match: AT2G40510.1 (Ribosomal protein S26e family protein ) HSP 1 Score: 212.2 bits (539), Expect = 2.4e-55 Identity = 106/129 (82.17%), Postives = 112/129 (86.82%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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