Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTGCATTTTATTGTTAATGGCTGGTCAACTCCCACGTCCATGGTTCCGTTTGGGCTCTATGACCCGACCAACAACGGCCACAACATCCGCTCCCGTGACGGAGCAACCGCGCCCAGTTCCAGCCCGGGTTCGACCGCCAATACTCCGCCCAACCGCTGTGACCGAGCCTGCAGAACCCACCACCCCACGCCAATCTGCCAAGTCGCCGCAGCAATTGGCTAAATCCCCGCCGCAGTTGCCTCGCCCAGCTTCACTGACACCTCCGGTGAAAATACCACCGTCGTCGCCGGCGATGACAAGACCTGTTCTTCCGTCGCCTTCGAATGGACGGAGCGGTGGGACTGCAGCGGCAACCCCGGCGGTGAAACCCAGTAGTCCGAAGCCAAGAAGTTCTTCAGTTGCAGGGTCTCCGGTGAACAGTGAGTCGTCTGATAAAGACAATAGCAAACAGCCGAGTCCTGTTCCGTCTCCCTCAGTCCCAAAGTCCATACCAGCGGTTCCGTCGCCGTATCAGTCACCAAAGCCGAAGGCCACCGCTTCGCCGCCGTCACCGCTGGTTTTACCCCCTTCTCAGTTGGAGTCCGTTGCTGAGCCTAAACATGAGACCATTCCTCAAGAGGTAGCGTTAATTTTGCTAAATTTATTTAAAGCCCCTTTAAGTACATTGATTAGGGTATTTTTTAACACGAGAAATTCTCAAATCTCTGATTTTTTTTTTAATAATTTTTTTAAGGACATATACCTTTAAACAGTTAATCTAAGTTATTAAGAATGTTATGTTTAAGAGAATTCAAAGTTTAAATTTGAGCTTGTGAATATAATATTACTAAGAAGTAGACAAATTTTGAATCAACTAGTACTTGACCCAAAAATTTAAAGTGTAGATAGTGAAAGTAGTTCTATAATCTATTCATTTATTTATGTTGTTAACAGGTAGAACGGAAGACGGTTATTTTCCAAAAAGTCATGGACAAGCCTTCACAACCTGACCACCATGTCACTAACTACCATAACCATAGCCCTGGAATTGGGCAAAACGGCAAGCAAGAACAACACAAGAATGGTGAAGAACAAGGCAAAGACAAAGGAGTTGGAGGTAAAAAAGCATTCGGGTCATCCGATGATAAAGATACAAACACGAGAGTTATAACAATGGCAGGAGAAAACAGAGGAGCTTTCATGGAAGTTGTCCTCTCAGACAAAAACAACAACAGCCGTCATCATCAAATAAGTCAAAACAACGAGAGCGAAAACGAAGACAACAAAAGTAAAAAGAAATCAATGGGGACTCTTAATGGGTTGCCTATGAAAGCCTTTTTTAACAGCAACGTTCAAGGGATAAACAATTCGATTCTGATGGACTCGAAATTCAGCCACCACGACCCTGGGATTCACCTTGTCTTTTCCAGGATGCCGCCATCTGCCGTTGACGAAGATGATCAGGGACAGCAATGAATTAGTTCTTTGGTTTCGTCTGATTTGTGTCTCTAAGTTTATCATCTGTGTTTTATTTTATTTTATTTTTTATTTTATATGACTGTTGCTTTGAGAGAATAAGTGTATGGGAAGTTAATTGGGTCTTATGATTCAGCCTAGAGAGTGAGAATTCTAGTTTGTTTAAGTTTAATTTAATGCATATATAATAAAATGGGCTGACTTTTCTGTTTAA
mRNA sequence
TTGCATTTTATTGTTAATGGCTGGTCAACTCCCACGTCCATGGTTCCGTTTGGGCTCTATGACCCGACCAACAACGGCCACAACATCCGCTCCCGTGACGGAGCAACCGCGCCCAGTTCCAGCCCGGGTTCGACCGCCAATACTCCGCCCAACCGCTGTGACCGAGCCTGCAGAACCCACCACCCCACGCCAATCTGCCAAGTCGCCGCAGCAATTGGCTAAATCCCCGCCGCAGTTGCCTCGCCCAGCTTCACTGACACCTCCGGTGAAAATACCACCGTCGTCGCCGGCGATGACAAGACCTGTTCTTCCGTCGCCTTCGAATGGACGGAGCGGTGGGACTGCAGCGGCAACCCCGGCGGTGAAACCCAGTAGTCCGAAGCCAAGAAGTTCTTCAGTTGCAGGGTCTCCGGTGAACAGTGAGTCGTCTGATAAAGACAATAGCAAACAGCCGAGTCCTGTTCCGTCTCCCTCAGTCCCAAAGTCCATACCAGCGGTTCCGTCGCCGTATCAGTCACCAAAGCCGAAGGCCACCGCTTCGCCGCCGTCACCGCTGGTTTTACCCCCTTCTCAGTTGGAGTCCGTTGCTGAGCCTAAACATGAGACCATTCCTCAAGAGGTAGAACGGAAGACGGTTATTTTCCAAAAAGTCATGGACAAGCCTTCACAACCTGACCACCATGTCACTAACTACCATAACCATAGCCCTGGAATTGGGCAAAACGGCAAGCAAGAACAACACAAGAATGGTGAAGAACAAGGCAAAGACAAAGGAGTTGGAGGTAAAAAAGCATTCGGGTCATCCGATGATAAAGATACAAACACGAGAGTTATAACAATGGCAGGAGAAAACAGAGGAGCTTTCATGGAAGTTGTCCTCTCAGACAAAAACAACAACAGCCGTCATCATCAAATAAGTCAAAACAACGAGAGCGAAAACGAAGACAACAAAAGTAAAAAGAAATCAATGGGGACTCTTAATGGGTTGCCTATGAAAGCCTTTTTTAACAGCAACGTTCAAGGGATAAACAATTCGATTCTGATGGACTCGAAATTCAGCCACCACGACCCTGGGATTCACCTTGTCTTTTCCAGGATGCCGCCATCTGCCGTTGACGAAGATGATCAGGGACAGCAATGAATTAGTTCTTTGGTTTCGTCTGATTTGTGTCTCTAAGTTTATCATCTGTGTTTTATTTTATTTTATTTTTTATTTTATATGACTGTTGCTTTGAGAGAATAAGTGTATGGGAAGTTAATTGGGTCTTATGATTCAGCCTAGAGAGTGAGAATTCTAGTTTGTTTAAGTTTAATTTAATGCATATATAATAAAATGGGCTGACTTTTCTGTTTAA
Coding sequence (CDS)
ATGGCTGGTCAACTCCCACGTCCATGGTTCCGTTTGGGCTCTATGACCCGACCAACAACGGCCACAACATCCGCTCCCGTGACGGAGCAACCGCGCCCAGTTCCAGCCCGGGTTCGACCGCCAATACTCCGCCCAACCGCTGTGACCGAGCCTGCAGAACCCACCACCCCACGCCAATCTGCCAAGTCGCCGCAGCAATTGGCTAAATCCCCGCCGCAGTTGCCTCGCCCAGCTTCACTGACACCTCCGGTGAAAATACCACCGTCGTCGCCGGCGATGACAAGACCTGTTCTTCCGTCGCCTTCGAATGGACGGAGCGGTGGGACTGCAGCGGCAACCCCGGCGGTGAAACCCAGTAGTCCGAAGCCAAGAAGTTCTTCAGTTGCAGGGTCTCCGGTGAACAGTGAGTCGTCTGATAAAGACAATAGCAAACAGCCGAGTCCTGTTCCGTCTCCCTCAGTCCCAAAGTCCATACCAGCGGTTCCGTCGCCGTATCAGTCACCAAAGCCGAAGGCCACCGCTTCGCCGCCGTCACCGCTGGTTTTACCCCCTTCTCAGTTGGAGTCCGTTGCTGAGCCTAAACATGAGACCATTCCTCAAGAGGTAGAACGGAAGACGGTTATTTTCCAAAAAGTCATGGACAAGCCTTCACAACCTGACCACCATGTCACTAACTACCATAACCATAGCCCTGGAATTGGGCAAAACGGCAAGCAAGAACAACACAAGAATGGTGAAGAACAAGGCAAAGACAAAGGAGTTGGAGGTAAAAAAGCATTCGGGTCATCCGATGATAAAGATACAAACACGAGAGTTATAACAATGGCAGGAGAAAACAGAGGAGCTTTCATGGAAGTTGTCCTCTCAGACAAAAACAACAACAGCCGTCATCATCAAATAAGTCAAAACAACGAGAGCGAAAACGAAGACAACAAAAGTAAAAAGAAATCAATGGGGACTCTTAATGGGTTGCCTATGAAAGCCTTTTTTAACAGCAACGTTCAAGGGATAAACAATTCGATTCTGATGGACTCGAAATTCAGCCACCACGACCCTGGGATTCACCTTGTCTTTTCCAGGATGCCGCCATCTGCCGTTGACGAAGATGATCAGGGACAGCAATGA
Protein sequence
MAGQLPRPWFRLGSMTRPTTATTSAPVTEQPRPVPARVRPPILRPTAVTEPAEPTTPRQSAKSPQQLAKSPPQLPRPASLTPPVKIPPSSPAMTRPVLPSPSNGRSGGTAAATPAVKPSSPKPRSSSVAGSPVNSESSDKDNSKQPSPVPSPSVPKSIPAVPSPYQSPKPKATASPPSPLVLPPSQLESVAEPKHETIPQEVERKTVIFQKVMDKPSQPDHHVTNYHNHSPGIGQNGKQEQHKNGEEQGKDKGVGGKKAFGSSDDKDTNTRVITMAGENRGAFMEVVLSDKNNNSRHHQISQNNESENEDNKSKKKSMGTLNGLPMKAFFNSNVQGINNSILMDSKFSHHDPGIHLVFSRMPPSAVDEDDQGQQ
Homology
BLAST of Lcy08g009110 vs. ExPASy TrEMBL
Match:
A0A6J1HKY3 (extensin-like OS=Cucurbita moschata OX=3662 GN=LOC111464501 PE=4 SV=1)
HSP 1 Score: 415.6 bits (1067), Expect = 2.2e-112
Identity = 243/379 (64.12%), Postives = 292/379 (77.04%), Query Frame = 0
Query: 1 MAGQLPRPWFRLGSMTRPTTATTSAPVTEQPRPVPARVRPPILRPTAVTEPAEPTTPRQS 60
MAGQ+PRPWFRLGSMTRPTTATT+APVT+QPRPVP R+RPP++R +++TE AEPTTP+QS
Sbjct: 1 MAGQVPRPWFRLGSMTRPTTATTTAPVTDQPRPVPPRIRPPLIRTSSLTELAEPTTPQQS 60
Query: 61 AKSPQQLAKSPPQLPRPASLTPPVKIPPSSPAMTRPVLPSPSNGRSGGTAAATPAVKPSS 120
AKSP QL + P P+P P PP P +TRPV+ S T A KPSS
Sbjct: 61 AKSPPQLPRLAPLTPQPKKEASP---PPPPPPLTRPVVTS------------TAAPKPSS 120
Query: 121 PKPRSSSVAGSPVNSESSDKDNSKQPSPVPSPSVPKSIPAVPSPYQS--PKPKATASPPS 180
PK +S S+ GSP + S DK+++K P+P PSPS+PKSIPAVPSPYQS PKPKATASPPS
Sbjct: 121 PKGKSHSLGGSPPRNGSFDKESNKHPTPAPSPSIPKSIPAVPSPYQSPKPKPKATASPPS 180
Query: 181 PLVLPPSQLESVAEPKHETIPQEVERKTVIFQKVMDKPSQPDHHVTNYHNHSPGIGQNGK 240
PLVLPP QL+ VAEP+ ETIPQEVERKTV+FQKVM+KPS PDH + NY++ + G G+NGK
Sbjct: 181 PLVLPPPQLQFVAEPRPETIPQEVERKTVVFQKVMEKPSPPDHDINNYNSQASGFGKNGK 240
Query: 241 QEQHKNGEEQGKDKGVGGKKAFGSSDDKDTNTRVITMAGENRGAFMEVVLSDKNNNSRHH 300
+ + +DKG G KK F SS DKD++TRVITMAGENRGA MEVVLSDKNNNSRH
Sbjct: 241 K------HDDNQDKGNGAKKPFVSSGDKDSSTRVITMAGENRGASMEVVLSDKNNNSRHL 300
Query: 301 QISQNNE----SENEDNKSKKKSMGTLNGLPMKAFFNSNVQGINNSILMDSKFSHHDPGI 360
QI+Q++ ++++DNKS KKS + PMKAFFNSNVQGINNSILMDSKF+HHDPGI
Sbjct: 301 QINQSDNGDTTNDSKDNKSNKKSTACRSAWPMKAFFNSNVQGINNSILMDSKFTHHDPGI 358
Query: 361 HLVFSRMPPSAVDEDDQGQ 374
HLVFS+MPP + ++D GQ
Sbjct: 361 HLVFSKMPPPSAHQEDGGQ 358
BLAST of Lcy08g009110 vs. ExPASy TrEMBL
Match:
A0A6J1H2W2 (pollen-specific leucine-rich repeat extensin-like protein 1 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111459978 PE=4 SV=1)
HSP 1 Score: 410.2 bits (1053), Expect = 9.1e-111
Identity = 250/384 (65.10%), Postives = 289/384 (75.26%), Query Frame = 0
Query: 1 MAGQLPRPWFRLGSMTRPTTATTSAPVTEQPRPVPARVRPPILRPTAVTEPAEPTTPRQS 60
MAGQLPRPWFRLGS+TRPTT T+ T+QPRPVPAR+RPP++R + TEPAEPTTP+ S
Sbjct: 1 MAGQLPRPWFRLGSLTRPTTGATTGSGTDQPRPVPARIRPPVIRTASFTEPAEPTTPQPS 60
Query: 61 AKSPQ---QLAKSPPQLPRPASLTPPVKIPPSSP--AMTRPVLPSPSNGRSGGTAAATPA 120
PQ + A SPPQLP P SLTPPVK P S P A+TRP LPSP+
Sbjct: 61 KSPPQTPMKKAASPPQLPLPGSLTPPVKKPASPPAAAVTRPALPSPA------------- 120
Query: 121 VKPSSPKPRSSSVAGSPVNSESSDKDNSKQPSPVPSPSVPKSIPAVPSPYQSPKPKATAS 180
K SPK +S SV GSP +E +KD+SKQ SPV SP VPKSIPAVP+PYQSPKPKA AS
Sbjct: 121 -KHISPKGKSGSVVGSPTKNELVNKDSSKQASPVSSPLVPKSIPAVPTPYQSPKPKAAAS 180
Query: 181 PPSPLVLPPSQLESVAEPKHETIPQEVERKTVIFQKVMDKPSQPDHHVTNYHNHSPGIGQ 240
PPSPL LPP QL+SV EPKHE+IPQEVERKTV+FQKVMDK SQ +H +T+YH H+ GQ
Sbjct: 181 PPSPLTLPPPQLQSVDEPKHESIPQEVERKTVVFQKVMDKASQGEHDITSYHTHAAEFGQ 240
Query: 241 NGKQEQHKNGEEQGKDKGVGGKKA-FGSSDDKD--TNTRVITMAGENRGAFMEVVLSDKN 300
NGKQE K+ E++ KDK +G KKA SS+DKD TNTRVITMAG+N GA ME+ LSDKN
Sbjct: 241 NGKQEPKKSDEDESKDKAIGAKKALLESSNDKDTNTNTRVITMAGKNNGASMEIFLSDKN 300
Query: 301 NNSRHHQISQNNESENEDNKSKKKSMGTLNGLPMKAFFNSNVQGINNSILMDSKFSHHDP 360
N ++ + NN +DNKS KK++ T NGLPMKAFFNSNVQGINNSILMDSKF+HHDP
Sbjct: 301 KN-KNEDTTNNN---LKDNKSTKKAIRTRNGLPMKAFFNSNVQGINNSILMDSKFTHHDP 360
Query: 361 GIHLVFSRM--PPSAVDEDDQGQQ 375
GIHL+FS M PPSA EDD+G Q
Sbjct: 361 GIHLLFSPMPPPPSADAEDDKGHQ 366
BLAST of Lcy08g009110 vs. ExPASy TrEMBL
Match:
A0A6J1KIF7 (extensin-like OS=Cucurbita maxima OX=3661 GN=LOC111494246 PE=4 SV=1)
HSP 1 Score: 409.8 bits (1052), Expect = 1.2e-110
Identity = 242/379 (63.85%), Postives = 289/379 (76.25%), Query Frame = 0
Query: 1 MAGQLPRPWFRLGSMTRPTTATTSAPVTEQPRPVPARVRPPILRPTAVTEPAEPTTPRQS 60
MAGQ+PRPWFRLGSMTRPTTATT+APVT+QPRP P R+RPP++R T++TE AEPTTP QS
Sbjct: 1 MAGQVPRPWFRLGSMTRPTTATTTAPVTDQPRPAPPRMRPPLIRTTSLTELAEPTTPLQS 60
Query: 61 AKSPQQLAKSPPQLPRPASLTPPVKIPPSSPAMTRPVLPSPSNGRSGGTAAATPAVKPSS 120
AKSP QL + P P+P P PP P +TRPV+ S T A KPSS
Sbjct: 61 AKSPPQLPRLAPLTPQPKKEASP---PPPPPPLTRPVVTS------------TAAPKPSS 120
Query: 121 PKPRSSSVAGSPVNSESSDKDNSKQPSPVPSPSVPKSIPAVPSPYQS--PKPKATASPPS 180
PK +S S+ GSP + S DK+++K P+PVPSPS+PKSIPAVPSPYQS PKPKATASPPS
Sbjct: 121 PKGKSHSLGGSPPRNGSFDKESNKHPTPVPSPSIPKSIPAVPSPYQSPKPKPKATASPPS 180
Query: 181 PLVLPPSQLESVAEPKHETIPQEVERKTVIFQKVMDKPSQPDHHVTNYHNHSPGIGQNGK 240
PLVLPP QL+ VAEP+ ETI QEVERKTV+FQKVM+KPS PDH + NYH+ + G G+NGK
Sbjct: 181 PLVLPPPQLQFVAEPRPETILQEVERKTVVFQKVMEKPSPPDHDINNYHSQASGFGKNGK 240
Query: 241 QEQHKNGEEQGKDKGVGGKKAFGSSDDKDTNTRVITMAGENRGAFMEVVLSDKNNNSRHH 300
+ + +DKG G KK F SS DKD++TRVITMAGENRGA MEVVLSDKNNNSRH
Sbjct: 241 K------HDDNQDKGNGAKKPFVSSGDKDSSTRVITMAGENRGASMEVVLSDKNNNSRHL 300
Query: 301 QISQNNE----SENEDNKSKKKSMGTLNGLPMKAFFNSNVQGINNSILMDSKFSHHDPGI 360
Q +Q+++ ++++DNKS KKS + PMKAFFNSNVQGINNSILMDSKF+HHDPGI
Sbjct: 301 QTNQSDKEDTTNDSKDNKSNKKSTACSSAWPMKAFFNSNVQGINNSILMDSKFTHHDPGI 358
Query: 361 HLVFSRMPPSAVDEDDQGQ 374
HLVFS+MPP + ++ GQ
Sbjct: 361 HLVFSKMPPPSAHQEHGGQ 358
BLAST of Lcy08g009110 vs. ExPASy TrEMBL
Match:
A0A6J1KY68 (serine/arginine repetitive matrix protein 1 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111499277 PE=4 SV=1)
HSP 1 Score: 395.2 bits (1014), Expect = 3.0e-106
Identity = 242/384 (63.02%), Postives = 283/384 (73.70%), Query Frame = 0
Query: 1 MAGQLPRPWFRLGSMTRPTTATTSAPVTEQPRPVPARVRPPILRPTAVTEPAEPTTPRQS 60
MA QLPRPWFRLGS+TRPTT T+ P T+QPRPVPAR+RPP++R + TEPAEPTTP+QS
Sbjct: 1 MAAQLPRPWFRLGSLTRPTTGATTGPGTDQPRPVPARIRPPVIRTASFTEPAEPTTPQQS 60
Query: 61 AKSPQ---QLAKSPPQLPRPASLTPPVKIPPSSP--AMTRPVLPSPSNGRSGGTAAATPA 120
PQ + A SPPQLP P SLTPPVK S P A+T P LPSP+
Sbjct: 61 KSPPQTPMKKAASPPQLPLPGSLTPPVKKAASPPAAAVTIPALPSPA------------- 120
Query: 121 VKPSSPKPRSSSVAGSPVNSESSDKDNSKQPSPVPSPSVPKSIPAVPSPYQSPKPKATAS 180
K SPK +S SV GSP +E +KD+ KQ SPV SP VPKSIPAVP+PYQSPKPK AS
Sbjct: 121 -KHISPKGKSGSVVGSPTKNELVNKDSRKQASPVSSPLVPKSIPAVPTPYQSPKPKTAAS 180
Query: 181 PPSPLVLPPSQLESVAEPKHETIPQEVERKTVIFQKVMDKPSQPDHHVTNYHNHSPGIGQ 240
PPSPL LPP QL+SV EPKHETIPQ VERKTV+FQKV+DK SQ +H + +YH + GQ
Sbjct: 181 PPSPLTLPPPQLQSVDEPKHETIPQAVERKTVVFQKVIDKASQAEHDIASYHTRAAEFGQ 240
Query: 241 NGKQEQHKNGEEQGKDKGVGGKKA-FGSSDDKD--TNTRVITMAGENRGAFMEVVLSDKN 300
NGKQE K+ E++ KDK +G KA SS+DKD TNT+VITMAG+N GAFME+ LSDKN
Sbjct: 241 NGKQEPKKSDEDESKDKAIGATKALLESSNDKDTNTNTKVITMAGKNNGAFMEIFLSDKN 300
Query: 301 NNSRHHQISQNNESENEDNKSKKKSMGTLNGLPMKAFFNSNVQGINNSILMDSKFSHHDP 360
N ++ + NN +DNKS KK++ T NG+PMKAFFNSNVQGINNSILMDSKF+HHDP
Sbjct: 301 KN-KNEDTTNNN---LKDNKSTKKTIRTRNGVPMKAFFNSNVQGINNSILMDSKFTHHDP 360
Query: 361 GIHLVFSRM--PPSAVDEDDQGQQ 375
GIHL+FS M PPSA EDD+G Q
Sbjct: 361 GIHLLFSPMPPPPSADAEDDKGHQ 366
BLAST of Lcy08g009110 vs. ExPASy TrEMBL
Match:
A0A6J1H458 (pollen-specific leucine-rich repeat extensin-like protein 1 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111459978 PE=4 SV=1)
HSP 1 Score: 394.4 bits (1012), Expect = 5.2e-106
Identity = 242/384 (63.02%), Postives = 280/384 (72.92%), Query Frame = 0
Query: 1 MAGQLPRPWFRLGSMTRPTTATTSAPVTEQPRPVPARVRPPILRPTAVTEPAEPTTPRQS 60
MAGQLPRPWFRLGS+TRPTT T+ T+QPRPVPAR+RPP++R + TEPAEPTTP+ S
Sbjct: 1 MAGQLPRPWFRLGSLTRPTTGATTGSGTDQPRPVPARIRPPVIRTASFTEPAEPTTPQPS 60
Query: 61 AKSPQ---QLAKSPPQLPRPASLTPPVKIPPSSP--AMTRPVLPSPSNGRSGGTAAATPA 120
PQ + A SPPQLP P SLTPPVK P S P A+TRP LPSP+
Sbjct: 61 KSPPQTPMKKAASPPQLPLPGSLTPPVKKPASPPAAAVTRPALPSPAKHI---------- 120
Query: 121 VKPSSPKPRSSSVAGSPVNSESSDKDNSKQPSPVPSPSVPKSIPAVPSPYQSPKPKATAS 180
SP +E +KD+SKQ SPV SP VPKSIPAVP+PYQSPKPKA AS
Sbjct: 121 ---------------SPTKNELVNKDSSKQASPVSSPLVPKSIPAVPTPYQSPKPKAAAS 180
Query: 181 PPSPLVLPPSQLESVAEPKHETIPQEVERKTVIFQKVMDKPSQPDHHVTNYHNHSPGIGQ 240
PPSPL LPP QL+SV EPKHE+IPQEVERKTV+FQKVMDK SQ +H +T+YH H+ GQ
Sbjct: 181 PPSPLTLPPPQLQSVDEPKHESIPQEVERKTVVFQKVMDKASQGEHDITSYHTHAAEFGQ 240
Query: 241 NGKQEQHKNGEEQGKDKGVGGKKA-FGSSDDKD--TNTRVITMAGENRGAFMEVVLSDKN 300
NGKQE K+ E++ KDK +G KKA SS+DKD TNTRVITMAG+N GA ME+ LSDKN
Sbjct: 241 NGKQEPKKSDEDESKDKAIGAKKALLESSNDKDTNTNTRVITMAGKNNGASMEIFLSDKN 300
Query: 301 NNSRHHQISQNNESENEDNKSKKKSMGTLNGLPMKAFFNSNVQGINNSILMDSKFSHHDP 360
N ++ + NN +DNKS KK++ T NGLPMKAFFNSNVQGINNSILMDSKF+HHDP
Sbjct: 301 KN-KNEDTTNNN---LKDNKSTKKAIRTRNGLPMKAFFNSNVQGINNSILMDSKFTHHDP 355
Query: 361 GIHLVFSRM--PPSAVDEDDQGQQ 375
GIHL+FS M PPSA EDD+G Q
Sbjct: 361 GIHLLFSPMPPPPSADAEDDKGHQ 355
BLAST of Lcy08g009110 vs. NCBI nr
Match:
XP_038906783.1 (putative proline-rich receptor-like protein kinase PERK11 [Benincasa hispida])
HSP 1 Score: 440.3 bits (1131), Expect = 1.7e-119
Identity = 266/386 (68.91%), Postives = 298/386 (77.20%), Query Frame = 0
Query: 1 MAGQLPRPWFRLGSMTRPTTATTSAPVTEQPRPVPARVRPPILRPTAVTEPAEPTTPRQS 60
MAGQLPRPWFRLGSMTRPTTATT+AP+ +QPRP ARVRPPI+RP A+TEPAEPTTP
Sbjct: 1 MAGQLPRPWFRLGSMTRPTTATTNAPIPDQPRPAAARVRPPIIRPAALTEPAEPTTP--- 60
Query: 61 AKSPQQLAKSPPQLPRPASLTPPVKIPPSSPAMTRPVLPSPSNGRSGGTAAATPAVKPSS 120
Q KSP QLPR ASLTPPVK S P VLP PS G+SGGTA A+PA P+S
Sbjct: 61 -----QRPKSPHQLPRAASLTPPVKNAASPPR----VLPLPSKGQSGGTATASPAANPTS 120
Query: 121 PKPRSSSVAGSPVNSESSDKDNSKQPSPVPSPSVPKSIPAVPSPYQSPKPKATASPPSPL 180
PK RSSSV GSP+ + +NSKQPSP PSPS+PKSIPAVP+PYQSPKPKATASPPSPL
Sbjct: 121 PKERSSSVVGSPMTN-----NNSKQPSPFPSPSIPKSIPAVPTPYQSPKPKATASPPSPL 180
Query: 181 VLPPSQLESVAEPKHETIPQEVERKTVIFQKVMDKPSQPDHHVTNYHNHSPGIGQNGKQE 240
+LPP QL SVAEPKHETIPQEVERKTV+FQKVMDK SQ +HH+T+YH H+ G QNGKQE
Sbjct: 181 ILPPPQLLSVAEPKHETIPQEVERKTVVFQKVMDKASQAEHHITDYHTHTAGFDQNGKQE 240
Query: 241 QHKNGEEQ-GKDKG--VGGKKAFGSSDDKDTNTRVITMAGENRGAFMEVVL-SDKNNNSR 300
+K+ E Q KDKG +GG K D NTRVITMAGEN+GAFME++ SDKN+NSR
Sbjct: 241 SNKSDENQISKDKGTIIGGNKKAAFDD----NTRVITMAGENKGAFMEILFSSDKNSNSR 300
Query: 301 HHQISQNNESEN------EDNKSKKKSM--GTLNGLPMKAFFNSNVQGINNSILMDSKFS 360
H Q Q +N +D+KSKKK+M T N LPMKAFFNSNVQGINNSILMDSKF+
Sbjct: 301 HQQQQQQQNQDNNVINSPKDSKSKKKTMRTKTRNVLPMKAFFNSNVQGINNSILMDSKFT 360
Query: 361 HHDPGIHLVFSRMPPSAVDEDDQGQQ 375
HHDPGIHLVFS +PPSA DEDDQ Q
Sbjct: 361 HHDPGIHLVFSSIPPSAEDEDDQRNQ 365
BLAST of Lcy08g009110 vs. NCBI nr
Match:
XP_022964490.1 (extensin-like [Cucurbita moschata] >KAG6593605.1 hypothetical protein SDJN03_13081, partial [Cucurbita argyrosperma subsp. sororia] >KAG7025952.1 hypothetical protein SDJN02_12450, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 415.6 bits (1067), Expect = 4.5e-112
Identity = 243/379 (64.12%), Postives = 292/379 (77.04%), Query Frame = 0
Query: 1 MAGQLPRPWFRLGSMTRPTTATTSAPVTEQPRPVPARVRPPILRPTAVTEPAEPTTPRQS 60
MAGQ+PRPWFRLGSMTRPTTATT+APVT+QPRPVP R+RPP++R +++TE AEPTTP+QS
Sbjct: 1 MAGQVPRPWFRLGSMTRPTTATTTAPVTDQPRPVPPRIRPPLIRTSSLTELAEPTTPQQS 60
Query: 61 AKSPQQLAKSPPQLPRPASLTPPVKIPPSSPAMTRPVLPSPSNGRSGGTAAATPAVKPSS 120
AKSP QL + P P+P P PP P +TRPV+ S T A KPSS
Sbjct: 61 AKSPPQLPRLAPLTPQPKKEASP---PPPPPPLTRPVVTS------------TAAPKPSS 120
Query: 121 PKPRSSSVAGSPVNSESSDKDNSKQPSPVPSPSVPKSIPAVPSPYQS--PKPKATASPPS 180
PK +S S+ GSP + S DK+++K P+P PSPS+PKSIPAVPSPYQS PKPKATASPPS
Sbjct: 121 PKGKSHSLGGSPPRNGSFDKESNKHPTPAPSPSIPKSIPAVPSPYQSPKPKPKATASPPS 180
Query: 181 PLVLPPSQLESVAEPKHETIPQEVERKTVIFQKVMDKPSQPDHHVTNYHNHSPGIGQNGK 240
PLVLPP QL+ VAEP+ ETIPQEVERKTV+FQKVM+KPS PDH + NY++ + G G+NGK
Sbjct: 181 PLVLPPPQLQFVAEPRPETIPQEVERKTVVFQKVMEKPSPPDHDINNYNSQASGFGKNGK 240
Query: 241 QEQHKNGEEQGKDKGVGGKKAFGSSDDKDTNTRVITMAGENRGAFMEVVLSDKNNNSRHH 300
+ + +DKG G KK F SS DKD++TRVITMAGENRGA MEVVLSDKNNNSRH
Sbjct: 241 K------HDDNQDKGNGAKKPFVSSGDKDSSTRVITMAGENRGASMEVVLSDKNNNSRHL 300
Query: 301 QISQNNE----SENEDNKSKKKSMGTLNGLPMKAFFNSNVQGINNSILMDSKFSHHDPGI 360
QI+Q++ ++++DNKS KKS + PMKAFFNSNVQGINNSILMDSKF+HHDPGI
Sbjct: 301 QINQSDNGDTTNDSKDNKSNKKSTACRSAWPMKAFFNSNVQGINNSILMDSKFTHHDPGI 358
Query: 361 HLVFSRMPPSAVDEDDQGQ 374
HLVFS+MPP + ++D GQ
Sbjct: 361 HLVFSKMPPPSAHQEDGGQ 358
BLAST of Lcy08g009110 vs. NCBI nr
Match:
XP_023513718.1 (proline-rich receptor-like protein kinase PERK8 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 411.0 bits (1055), Expect = 1.1e-110
Identity = 242/379 (63.85%), Postives = 288/379 (75.99%), Query Frame = 0
Query: 1 MAGQLPRPWFRLGSMTRPTTATTSAPVTEQPRPVPARVRPPILRPTAVTEPAEPTTPRQS 60
MAGQ+PRPWFRLGSMTRPTTATT+AP T+QPRP P R+RPP++R T++TE AEPTTP+QS
Sbjct: 1 MAGQVPRPWFRLGSMTRPTTATTTAPPTDQPRPAPPRMRPPLIRTTSLTELAEPTTPQQS 60
Query: 61 AKSPQQLAKSPPQLPRPASLTPPVKIPPSSPAMTRPVLPSPSNGRSGGTAAATPAVKPSS 120
AKSP QL + P P+P P PP P +TRPV+ S T A KPSS
Sbjct: 61 AKSPPQLPRLAPLTPQPKKEASP---PPPPPPLTRPVVTS------------TAAPKPSS 120
Query: 121 PKPRSSSVAGSPVNSESSDKDNSKQPSPVPSPSVPKSIPAVPSPYQS--PKPKATASPPS 180
PK +S S+ GSP + S DK+++K P+P PSPS+PKSIPAVPSPYQS PKPKATASPPS
Sbjct: 121 PKGKSHSLGGSPPRNGSFDKESNKHPTPAPSPSIPKSIPAVPSPYQSPKPKPKATASPPS 180
Query: 181 PLVLPPSQLESVAEPKHETIPQEVERKTVIFQKVMDKPSQPDHHVTNYHNHSPGIGQNGK 240
PLVLPP QL+ VAEP+ ETIPQEVERKTV+FQKVM+KPS PDH + NY++ + G G+NGK
Sbjct: 181 PLVLPPPQLQFVAEPRPETIPQEVERKTVVFQKVMEKPSPPDHDINNYNSQASGFGKNGK 240
Query: 241 QEQHKNGEEQGKDKGVGGKKAFGSSDDKDTNTRVITMAGENRGAFMEVVLSDKNNNSRHH 300
+ + +DKG G KK F SS DKD++TRVITMAGENRGA MEVVLSDKNNNSRH
Sbjct: 241 K------HDDNQDKGNGAKKPFVSSGDKDSSTRVITMAGENRGASMEVVLSDKNNNSRHL 300
Query: 301 QISQNNESE----NEDNKSKKKSMGTLNGLPMKAFFNSNVQGINNSILMDSKFSHHDPGI 360
Q +Q+++ E ++DNKS KKS PMKAFFNSNVQGINNSILMDSKF+HHDPGI
Sbjct: 301 QTNQSDKEETTNDSKDNKSNKKSTAGRGAWPMKAFFNSNVQGINNSILMDSKFTHHDPGI 358
Query: 361 HLVFSRMPPSAVDEDDQGQ 374
HLVFS+MPP + ++D GQ
Sbjct: 361 HLVFSKMPPPSAHQEDGGQ 358
BLAST of Lcy08g009110 vs. NCBI nr
Match:
KAG7013807.1 (hypothetical protein SDJN02_23974, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 410.2 bits (1053), Expect = 1.9e-110
Identity = 250/384 (65.10%), Postives = 289/384 (75.26%), Query Frame = 0
Query: 1 MAGQLPRPWFRLGSMTRPTTATTSAPVTEQPRPVPARVRPPILRPTAVTEPAEPTTPRQS 60
MAGQLPRPWFRLGS+TRPTT T+ T+QPRPVPAR+RPP++R + TEPAEPTTP+ S
Sbjct: 1 MAGQLPRPWFRLGSLTRPTTGATTGSGTDQPRPVPARIRPPVIRTASFTEPAEPTTPQPS 60
Query: 61 AKSPQ---QLAKSPPQLPRPASLTPPVKIPPSSP--AMTRPVLPSPSNGRSGGTAAATPA 120
PQ + A SPPQLP P SLTPPVK P S P A+TRP LPSP+
Sbjct: 61 KSPPQTPMKKAASPPQLPLPGSLTPPVKKPASPPAAAVTRPALPSPA------------- 120
Query: 121 VKPSSPKPRSSSVAGSPVNSESSDKDNSKQPSPVPSPSVPKSIPAVPSPYQSPKPKATAS 180
K SPK +S SV GSP +E +KD+SKQ SPV SP VPKSIPAVP+PYQSPKPKA AS
Sbjct: 121 -KHISPKGKSGSVVGSPTKNELVNKDSSKQASPVSSPLVPKSIPAVPTPYQSPKPKAAAS 180
Query: 181 PPSPLVLPPSQLESVAEPKHETIPQEVERKTVIFQKVMDKPSQPDHHVTNYHNHSPGIGQ 240
PPSPL LPP QL+SV EPKHE+IPQEVERKTV+FQKVMDK SQ +H +T+YH H+ GQ
Sbjct: 181 PPSPLTLPPPQLQSVDEPKHESIPQEVERKTVVFQKVMDKASQGEHDITSYHTHAAEFGQ 240
Query: 241 NGKQEQHKNGEEQGKDKGVGGKKA-FGSSDDKD--TNTRVITMAGENRGAFMEVVLSDKN 300
NGKQE K+ E++ KDK +G KKA SS+DKD TNTRVITMAG+N GA ME+ LSDKN
Sbjct: 241 NGKQEPKKSDEDESKDKAIGAKKALLESSNDKDTNTNTRVITMAGKNNGASMEIFLSDKN 300
Query: 301 NNSRHHQISQNNESENEDNKSKKKSMGTLNGLPMKAFFNSNVQGINNSILMDSKFSHHDP 360
N ++ + NN +DNKS KK++ T NGLPMKAFFNSNVQGINNSILMDSKF+HHDP
Sbjct: 301 KN-KNEDTTNNN---LKDNKSTKKTIRTRNGLPMKAFFNSNVQGINNSILMDSKFTHHDP 360
Query: 361 GIHLVFSRM--PPSAVDEDDQGQQ 375
GIHL+FS M PPSA EDD+G Q
Sbjct: 361 GIHLMFSPMPPPPSADAEDDKGHQ 366
BLAST of Lcy08g009110 vs. NCBI nr
Match:
XP_022958822.1 (pollen-specific leucine-rich repeat extensin-like protein 1 isoform X1 [Cucurbita moschata])
HSP 1 Score: 410.2 bits (1053), Expect = 1.9e-110
Identity = 250/384 (65.10%), Postives = 289/384 (75.26%), Query Frame = 0
Query: 1 MAGQLPRPWFRLGSMTRPTTATTSAPVTEQPRPVPARVRPPILRPTAVTEPAEPTTPRQS 60
MAGQLPRPWFRLGS+TRPTT T+ T+QPRPVPAR+RPP++R + TEPAEPTTP+ S
Sbjct: 1 MAGQLPRPWFRLGSLTRPTTGATTGSGTDQPRPVPARIRPPVIRTASFTEPAEPTTPQPS 60
Query: 61 AKSPQ---QLAKSPPQLPRPASLTPPVKIPPSSP--AMTRPVLPSPSNGRSGGTAAATPA 120
PQ + A SPPQLP P SLTPPVK P S P A+TRP LPSP+
Sbjct: 61 KSPPQTPMKKAASPPQLPLPGSLTPPVKKPASPPAAAVTRPALPSPA------------- 120
Query: 121 VKPSSPKPRSSSVAGSPVNSESSDKDNSKQPSPVPSPSVPKSIPAVPSPYQSPKPKATAS 180
K SPK +S SV GSP +E +KD+SKQ SPV SP VPKSIPAVP+PYQSPKPKA AS
Sbjct: 121 -KHISPKGKSGSVVGSPTKNELVNKDSSKQASPVSSPLVPKSIPAVPTPYQSPKPKAAAS 180
Query: 181 PPSPLVLPPSQLESVAEPKHETIPQEVERKTVIFQKVMDKPSQPDHHVTNYHNHSPGIGQ 240
PPSPL LPP QL+SV EPKHE+IPQEVERKTV+FQKVMDK SQ +H +T+YH H+ GQ
Sbjct: 181 PPSPLTLPPPQLQSVDEPKHESIPQEVERKTVVFQKVMDKASQGEHDITSYHTHAAEFGQ 240
Query: 241 NGKQEQHKNGEEQGKDKGVGGKKA-FGSSDDKD--TNTRVITMAGENRGAFMEVVLSDKN 300
NGKQE K+ E++ KDK +G KKA SS+DKD TNTRVITMAG+N GA ME+ LSDKN
Sbjct: 241 NGKQEPKKSDEDESKDKAIGAKKALLESSNDKDTNTNTRVITMAGKNNGASMEIFLSDKN 300
Query: 301 NNSRHHQISQNNESENEDNKSKKKSMGTLNGLPMKAFFNSNVQGINNSILMDSKFSHHDP 360
N ++ + NN +DNKS KK++ T NGLPMKAFFNSNVQGINNSILMDSKF+HHDP
Sbjct: 301 KN-KNEDTTNNN---LKDNKSTKKAIRTRNGLPMKAFFNSNVQGINNSILMDSKFTHHDP 360
Query: 361 GIHLVFSRM--PPSAVDEDDQGQQ 375
GIHL+FS M PPSA EDD+G Q
Sbjct: 361 GIHLLFSPMPPPPSADAEDDKGHQ 366
BLAST of Lcy08g009110 vs. TAIR 10
Match:
AT2G46630.1 (unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 110095 Blast hits to 59224 proteins in 2216 species: Archae - 177; Bacteria - 15429; Metazoa - 38345; Fungi - 18843; Plants - 13341; Viruses - 3084; Other Eukaryotes - 20876 (source: NCBI BLink). )
HSP 1 Score: 105.5 bits (262), Expect = 9.2e-23
Identity = 128/393 (32.57%), Postives = 182/393 (46.31%), Query Frame = 0
Query: 7 RPWFRLGSMTRPTTATTSAPVTEQPRPVPAR---VRPPILRPTAVTEPAEPTTPRQSAKS 66
RPWFRL S+ RPT +S P QPRP VRPP +P+ P RQ
Sbjct: 5 RPWFRLSSIARPTAQGSSDPPPPQPRPTSRSSLVVRPPAKQPS-------PPRQRQPRSP 64
Query: 67 PQQLAKSPPQLPRPAS--LTPP-VKIPPSSPAMTRPVLPSPSNGRSGGTAAATPAVKPSS 126
P+Q + PP PR LTPP K PP+SP R SP + R A P
Sbjct: 65 PRQ--QDPPSPPRQQQQPLTPPRQKAPPTSPPQERSPYHSPPS-RHMSPPTPPKAATPPP 124
Query: 127 PKPRSSSVAGSPVNSESSDKDNSKQPSPVPSP-----SVPKSIPAVPSPYQSPKPKATAS 186
P PR SS P E + ++P+ PSP S SP +S + S
Sbjct: 125 PPPR-SSYTSPPSPKEVQEALPPRKPNSPPSPAHSSRSTTSESVKTRSPSESENHRKAPS 184
Query: 187 PP--SPLVLPPSQLESVAEPKHETIPQEVERKTVIFQKVMDKPSQPDHHVTNY-HNHSPG 246
P SP LP S L S +E +K ++ + + + +HH N+ H+++
Sbjct: 185 PRVLSPYSLPASLLHS---------ERETTQKNILTAEKTSQTHETNHHNQNHNHDYNQN 244
Query: 247 IGQNGKQEQHKNGEEQGKDKGVGGKKAFGSSDDKDTNTRVITMAGENRGAFMEVVLSDKN 306
N ++N QG + ++ S + +TRVIT+AGEN+GA ME++ S +
Sbjct: 245 HNYNQNHSYNQNQNHQGNNPKKMHRQPSSSDSENIMSTRVITIAGENKGAVMEILRSPQG 304
Query: 307 NNS----------------RHHQISQNNESENEDNKSKKKSMGTL-----NGLPMKAFFN 365
N + + ++ ++ S +++ + KKK+ + + LPMKAF N
Sbjct: 305 NKTGGSGTHSSRVSHGTGEKGRRLQSSSSSSSDEGEGKKKTTKNVPNKGNSNLPMKAFMN 364
BLAST of Lcy08g009110 vs. TAIR 10
Match:
AT4G18670.1 (Leucine-rich repeat (LRR) family protein )
HSP 1 Score: 43.5 bits (101), Expect = 4.3e-04
Identity = 61/176 (34.66%), Postives = 76/176 (43.18%), Query Frame = 0
Query: 10 FRLGSMTRPTTATTSAPVTEQPRPVPARVRPPILRPTAVTEPAEPTTPRQSAKSPQQLAK 69
F G TRP S P T P P P I +T P+ PTTP P
Sbjct: 398 FGCGRSTRPPVVVPSPPTTPSPGGSPP--SPSISPSPPITVPSPPTTPSPGGSPP----- 457
Query: 70 SPPQLPRPASLTPPVKIPPSSPAMTRPVLPSPSNGRSGGTAAATPAVKPSSPKPRSSSVA 129
SP +P P S TP PP+SP P SP + + T +P P++P P
Sbjct: 458 SPSIVPSPPSTTPSPGSPPTSPTTPTPG-GSPPSSPTTPTPGGSPPSSPTTPTP-----G 517
Query: 130 GSPVNSESSDKDNSKQPSPVPSPSVPKSIPAVPSPYQSPKPKATASPPSPLVLPPS 186
GSP +S ++ PSP SPS P ++P+ PS SP SPPSP PS
Sbjct: 518 GSPPSSPTTPSPGGSPPSPSISPSPPITVPSPPSTPTSP-----GSPPSPSSPTPS 555
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1HKY3 | 2.2e-112 | 64.12 | extensin-like OS=Cucurbita moschata OX=3662 GN=LOC111464501 PE=4 SV=1 | [more] |
A0A6J1H2W2 | 9.1e-111 | 65.10 | pollen-specific leucine-rich repeat extensin-like protein 1 isoform X1 OS=Cucurb... | [more] |
A0A6J1KIF7 | 1.2e-110 | 63.85 | extensin-like OS=Cucurbita maxima OX=3661 GN=LOC111494246 PE=4 SV=1 | [more] |
A0A6J1KY68 | 3.0e-106 | 63.02 | serine/arginine repetitive matrix protein 1 isoform X1 OS=Cucurbita maxima OX=36... | [more] |
A0A6J1H458 | 5.2e-106 | 63.02 | pollen-specific leucine-rich repeat extensin-like protein 1 isoform X2 OS=Cucurb... | [more] |
Match Name | E-value | Identity | Description | |
XP_038906783.1 | 1.7e-119 | 68.91 | putative proline-rich receptor-like protein kinase PERK11 [Benincasa hispida] | [more] |
XP_022964490.1 | 4.5e-112 | 64.12 | extensin-like [Cucurbita moschata] >KAG6593605.1 hypothetical protein SDJN03_130... | [more] |
XP_023513718.1 | 1.1e-110 | 63.85 | proline-rich receptor-like protein kinase PERK8 [Cucurbita pepo subsp. pepo] | [more] |
KAG7013807.1 | 1.9e-110 | 65.10 | hypothetical protein SDJN02_23974, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
XP_022958822.1 | 1.9e-110 | 65.10 | pollen-specific leucine-rich repeat extensin-like protein 1 isoform X1 [Cucurbit... | [more] |
Match Name | E-value | Identity | Description | |
AT2G46630.1 | 9.2e-23 | 32.57 | unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXP... | [more] |
AT4G18670.1 | 4.3e-04 | 34.66 | Leucine-rich repeat (LRR) family protein | [more] |