Lcy08g004670.1 (mRNA) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGGCGTCGTTACTCCGTTGGGTGTGCTCGTCATCTCGCAGATCTGTATCGTATTCCTATCGTTATCATCTTAAATCTAATATTATCGTTACTCCGTTACCTGCCTTGATCCCGAATCTTCTCCGTCGCGCCTTCTCAGAGCCAACCAGGGCGCCGTCCAAGGTACTTCAATTTCTTCAACATTTTGATGGTTGATCTAATTTAATTTGTGTACATCTAATTCATGATATAAGAAAAGGAATCAGAATTAAGTAATTAATATACATACATATGTATATATTTGTAGTCGAGTGGTGGAGAAGTTGGTAAGTTATCAATGGAGGAAGCAGAAGGTTCGGAGAATTGGGAGTTGTTCAAGTCATGGATGTTGGAGAACGATAGGAGTTACGAGAGCGAGGAAGAGATGTTGAATAGGTTTCAGATATTCTGTAACAGGGTGAAGATGGTTGATGAGTCGAACAAGAAGTATCGTGGCCGTCCGACATTTGGGTTGACTTGCTTTGCAGACATGAACCGTGATGAGGTCCCGTGCCAGCGTCACCTCCATTTGGTACATCCCCGCCGGATAAGTGTGGAGGACGAGGACGAGGACGAGATCGAGATCGAGGTCGAGGACGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGACGAGGACTAG ATGGCGGCGTCGTTACTCCGTTGGGTGTGCTCGTCATCTCGCAGATCTGTATCGTATTCCTATCGTTATCATCTTAAATCTAATATTATCGTTACTCCGTTACCTGCCTTGATCCCGAATCTTCTCCGTCGCGCCTTCTCAGAGCCAACCAGGGCGCCGTCCAAGTCGAGTGGTGGAGAAGTTGGTAAGTTATCAATGGAGGAAGCAGAAGGTTCGGAGAATTGGGAGTTGTTCAAGTCATGGATGTTGGAGAACGATAGGAGTTACGAGAGCGAGGAAGAGATGTTGAATAGGTTTCAGATATTCTGTAACAGGGTGAAGATGGTTGATGAGTCGAACAAGAAGTATCGTGGCCGTCCGACATTTGGGTTGACTTGCTTTGCAGACATGAACCGTGATGAGGTCCCGTGCCAGCGTCACCTCCATTTGGTACATCCCCGCCGGATAAGTGTGGAGGACGAGGACGAGGACGAGATCGAGATCGAGGTCGAGGACGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGACGAGGACTAG ATGGCGGCGTCGTTACTCCGTTGGGTGTGCTCGTCATCTCGCAGATCTGTATCGTATTCCTATCGTTATCATCTTAAATCTAATATTATCGTTACTCCGTTACCTGCCTTGATCCCGAATCTTCTCCGTCGCGCCTTCTCAGAGCCAACCAGGGCGCCGTCCAAGTCGAGTGGTGGAGAAGTTGGTAAGTTATCAATGGAGGAAGCAGAAGGTTCGGAGAATTGGGAGTTGTTCAAGTCATGGATGTTGGAGAACGATAGGAGTTACGAGAGCGAGGAAGAGATGTTGAATAGGTTTCAGATATTCTGTAACAGGGTGAAGATGGTTGATGAGTCGAACAAGAAGTATCGTGGCCGTCCGACATTTGGGTTGACTTGCTTTGCAGACATGAACCGTGATGAGGTCCCGTGCCAGCGTCACCTCCATTTGGTACATCCCCGCCGGATAAGTGTGGAGGACGAGGACGAGGACGAGATCGAGATCGAGGTCGAGGACGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGACGAGGACTAG MAASLLRWVCSSSRRSVSYSYRYHLKSNIIVTPLPALIPNLLRRAFSEPTRAPSKSSGGEVGKLSMEEAEGSENWELFKSWMLENDRSYESEEEMLNRFQIFCNRVKMVDESNKKYRGRPTFGLTCFADMNRDEVPCQRHLHLVHPRRISVEDEDEDEIEIEVEDEEEEEEEEEEDED Homology
BLAST of Lcy08g004670.1 vs. ExPASy Swiss-Prot
Match: P00784 (Papain OS=Carica papaya OX=3649 PE=1 SV=1) HSP 1 Score: 55.5 bits (132), Expect = 7.3e-07 Identity = 26/59 (44.07%), Postives = 42/59 (71.19%), Query Frame = 0
BLAST of Lcy08g004670.1 vs. ExPASy Swiss-Prot
Match: P05994 (Papaya proteinase 4 OS=Carica papaya OX=3649 PE=1 SV=3) HSP 1 Score: 53.5 bits (127), Expect = 2.8e-06 Identity = 25/59 (42.37%), Postives = 41/59 (69.49%), Query Frame = 0
BLAST of Lcy08g004670.1 vs. ExPASy Swiss-Prot
Match: P14080 (Chymopapain OS=Carica papaya OX=3649 PE=1 SV=2) HSP 1 Score: 53.1 bits (126), Expect = 3.6e-06 Identity = 26/59 (44.07%), Postives = 40/59 (67.80%), Query Frame = 0
BLAST of Lcy08g004670.1 vs. ExPASy Swiss-Prot
Match: P10056 (Caricain OS=Carica papaya OX=3649 PE=1 SV=2) HSP 1 Score: 53.1 bits (126), Expect = 3.6e-06 Identity = 26/59 (44.07%), Postives = 39/59 (66.10%), Query Frame = 0
BLAST of Lcy08g004670.1 vs. ExPASy Swiss-Prot
Match: O23791 (Fruit bromelain OS=Ananas comosus OX=4615 PE=1 SV=1) HSP 1 Score: 51.2 bits (121), Expect = 1.4e-05 Identity = 23/61 (37.70%), Postives = 33/61 (54.10%), Query Frame = 0
BLAST of Lcy08g004670.1 vs. ExPASy TrEMBL
Match: A0A5N6R8Z3 (Inhibitor_I29 domain-containing protein OS=Carpinus fangiana OX=176857 GN=FH972_014132 PE=3 SV=1) HSP 1 Score: 59.3 bits (142), Expect = 1.9e-05 Identity = 34/82 (41.46%), Postives = 50/82 (60.98%), Query Frame = 0
BLAST of Lcy08g004670.1 vs. ExPASy TrEMBL
Match: A0A0A0L4P3 (Inhibitor_I29 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G131910 PE=4 SV=1) HSP 1 Score: 59.3 bits (142), Expect = 1.9e-05 Identity = 30/69 (43.48%), Postives = 45/69 (65.22%), Query Frame = 0
BLAST of Lcy08g004670.1 vs. ExPASy TrEMBL
Match: A0A2N9IUN2 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS55876 PE=3 SV=1) HSP 1 Score: 57.0 bits (136), Expect = 9.3e-05 Identity = 28/59 (47.46%), Postives = 42/59 (71.19%), Query Frame = 0
BLAST of Lcy08g004670.1 vs. ExPASy TrEMBL
Match: A0A2N9EW73 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS6967 PE=3 SV=1) HSP 1 Score: 57.0 bits (136), Expect = 9.3e-05 Identity = 28/59 (47.46%), Postives = 42/59 (71.19%), Query Frame = 0
BLAST of Lcy08g004670.1 vs. ExPASy TrEMBL
Match: A0A5A7UUL9 (Xylem cysteine proteinase 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold886G00130 PE=3 SV=1) HSP 1 Score: 55.8 bits (133), Expect = 2.1e-04 Identity = 27/59 (45.76%), Postives = 41/59 (69.49%), Query Frame = 0
BLAST of Lcy08g004670.1 vs. NCBI nr
Match: XP_038887495.1 (pro-cathepsin H-like [Benincasa hispida]) HSP 1 Score: 67.4 bits (163), Expect = 1.4e-07 Identity = 39/82 (47.56%), Postives = 52/82 (63.41%), Query Frame = 0
BLAST of Lcy08g004670.1 vs. NCBI nr
Match: XP_038878031.1 (uncharacterized protein LOC120070224 [Benincasa hispida]) HSP 1 Score: 60.5 bits (145), Expect = 1.7e-05 Identity = 39/115 (33.91%), Postives = 60/115 (52.17%), Query Frame = 0
BLAST of Lcy08g004670.1 vs. NCBI nr
Match: KAE8650303.1 (hypothetical protein Csa_010836 [Cucumis sativus]) HSP 1 Score: 59.3 bits (142), Expect = 3.9e-05 Identity = 30/69 (43.48%), Postives = 45/69 (65.22%), Query Frame = 0
BLAST of Lcy08g004670.1 vs. NCBI nr
Match: KAE8057439.1 (hypothetical protein FH972_014132 [Carpinus fangiana]) HSP 1 Score: 59.3 bits (142), Expect = 3.9e-05 Identity = 34/82 (41.46%), Postives = 50/82 (60.98%), Query Frame = 0
BLAST of Lcy08g004670.1 vs. NCBI nr
Match: XP_008451198.1 (PREDICTED: xylem cysteine proteinase 1-like [Cucumis melo] >KAA0059602.1 xylem cysteine proteinase 1-like [Cucumis melo var. makuwa] >TYK08135.1 xylem cysteine proteinase 1-like [Cucumis melo var. makuwa]) HSP 1 Score: 55.8 bits (133), Expect = 4.3e-04 Identity = 27/59 (45.76%), Postives = 41/59 (69.49%), Query Frame = 0
BLAST of Lcy08g004670.1 vs. TAIR 10
Match: AT3G19390.1 (Granulin repeat cysteine protease family protein ) HSP 1 Score: 42.0 bits (97), Expect = 6.0e-04 Identity = 21/63 (33.33%), Postives = 35/63 (55.56%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
|