Homology
BLAST of Lcy06g012580 vs. ExPASy Swiss-Prot
Match:
P11369 (LINE-1 retrotransposable element ORF2 protein OS=Mus musculus OX=10090 GN=Pol PE=1 SV=2)
HSP 1 Score: 104.4 bits (259), Expect = 2.1e-21
Identity = 69/235 (29.36%), Postives = 126/235 (53.62%), Query Frame = 0
Query: 35 IKGLEDDHSKWINDEEEIGSATNSYFMKLFSSSLPNIEEINKTTNVVD-KKLTEEQVIWM 94
I + ++ D EEI + S++ +L+S+ L N++E++K + KL ++QV +
Sbjct: 397 INKIRNEKGDITTDPEEIQNTIRSFYKRLYSTKLENLDEMDKFLDRYQVPKLNQDQVDHL 456
Query: 95 DRDFTKEEIEAALKSMNPPKASGPDGAHALFFQKYWGILGIDISDMCLKVLNQGESVEEL 154
+ + +EIEA + S+ K+ GPDG A F+Q + L + + K+ +G
Sbjct: 457 NSPISPKEIEAVINSLPTKKSPGPDGFSAEFYQTFKEDLIPILHKLFHKIEVEGTLPNSF 516
Query: 155 NNTLISLIPK-CKDPKRMSDFRPITLCNVTYKLIAKTLANRLKKVLNSIIAQNQSAFVSE 214
I+LIPK KDP ++ +FRPI+L N+ K++ K LANR+++ + +II +Q F+
Sbjct: 517 YEATITLIPKPQKDPTKIENFRPISLMNIDAKILNKILANRIQEHIKAIIHPDQVGFI-P 576
Query: 215 RLIITDNVILDFESIHAPDNRKMGKKGFLAMKLDMGKAFDRVEWAYIDKIMSHMG 268
+ N+ IH + K+ K + + LD KAFD+++ ++ K++ G
Sbjct: 577 GMQGWFNIRKSINVIHYIN--KLKDKNHMIISLDAEKAFDKIQHPFMIKVLERSG 628
BLAST of Lcy06g012580 vs. ExPASy Swiss-Prot
Match:
P14381 (Transposon TX1 uncharacterized 149 kDa protein OS=Xenopus laevis OX=8355 PE=4 SV=1)
HSP 1 Score: 100.9 bits (250), Expect = 2.3e-20
Identity = 78/258 (30.23%), Postives = 126/258 (48.84%), Query Frame = 0
Query: 5 IRSREDWLKWGDKNIKWFHSRATHRKRKNEIKGLEDDHSKWINDEEEIGSATNSYFMKLF 64
+RSR L D+ ++F++ + + +I L + + D E I S++ LF
Sbjct: 358 VRSRMQLLCDMDRGSRFFYALEKKKGNRKQITCLFAEDGTPLEDPEAIRDRARSFYQNLF 417
Query: 65 SS---SLPNIEEINKTTNVVDKKLTEEQVIWMDRDFTKEEIEAALKSMNPPKASGPDGAH 124
S S EE+ VV ++ E ++ T +E+ AL+ M K+ G DG
Sbjct: 418 SPDPISPDACEELWDGLPVVSERRKER----LETPITLDELSQALRLMPHNKSPGLDGLT 477
Query: 125 ALFFQKYWGILGIDISDMCLKVLNQGESVEELNNTLISLIPKCKDPKRMSDFRPITLCNV 184
FFQ +W LG D + + +GE ++SL+PK D + + ++RP++L +
Sbjct: 478 IEFFQFFWDTLGPDFHRVLTEAFKKGELPLSCRRAVLSLLPKKGDLRLIKNWRPVSLLST 537
Query: 185 TYKLIAKTLANRLKKVLNSIIAQNQSAFVSERLIITDNVILDFESIHAPDNRKMGKKGFL 244
YK++AK ++ RLK VL +I +QS V R I DNV L + +H R+ G
Sbjct: 538 DYKIVAKAISLRLKSVLAEVIHPDQSYTVPGRTIF-DNVFLIRDLLHFA--RRTG-LSLA 597
Query: 245 AMKLDMGKAFDRVEWAYI 260
+ LD KAFDRV+ Y+
Sbjct: 598 FLSLDQEKAFDRVDHQYL 607
BLAST of Lcy06g012580 vs. ExPASy Swiss-Prot
Match:
O00370 (LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens OX=9606 PE=1 SV=1)
HSP 1 Score: 92.8 bits (229), Expect = 6.3e-18
Identity = 65/241 (26.97%), Postives = 122/241 (50.62%), Query Frame = 0
Query: 29 RKRKNEIKGLEDDHSKWINDEEEIGSATNSYFMKLFSSSLPNIEEINKTTNVVD-KKLTE 88
++ KN+I +++D D EI + Y+ L+++ L N+EE++ + +L +
Sbjct: 384 KREKNQIDTIKNDKGDITTDPTEIQTTIREYYKHLYANKLENLEEMDTFLDTYTLPRLNQ 443
Query: 89 EQVIWMDRDFTKEEIEAALKSMNPPKASGPDGAHALFFQKYWGILGIDISDMCLKVLNQG 148
E+V ++R T EI A + S+ K+ GPDG A F+Q+Y L + + + +G
Sbjct: 444 EEVESLNRPITGSEIVAIINSLPTKKSPGPDGFTAEFYQRYKEELVPFLLKLFQSIEKEG 503
Query: 149 ESVEELNNTLISLIPK-CKDPKRMSDFRPITLCNVTYKLIAKTLANRLKKVLNSIIAQNQ 208
I LIPK +D + +FRPI+L N+ K++ K LANR+++ + +I +Q
Sbjct: 504 ILPNSFYEASIILIPKPGRDTTKKENFRPISLMNIDAKILNKILANRIQQHIKKLIHHDQ 563
Query: 209 SAFVSERLIITDNVILDFESIHAPDNRKMGKKGFLAMKLDMGKAFDRVEWAYIDKIMSHM 268
F+ + N+ I + K K + + +D KAFD+++ ++ K ++ +
Sbjct: 564 VGFI-PGMQGWFNIRKSINVIQHINRAK--DKNHVIISIDAEKAFDKIQQPFMLKTLNKL 621
BLAST of Lcy06g012580 vs. ExPASy Swiss-Prot
Match:
P08548 (LINE-1 reverse transcriptase homolog OS=Nycticebus coucang OX=9470 PE=4 SV=1)
HSP 1 Score: 90.5 bits (223), Expect = 3.1e-17
Identity = 64/246 (26.02%), Postives = 125/246 (50.81%), Query Frame = 0
Query: 27 THRKR-KNEIKGLEDDHSKWINDEEEIGSATNSYFMKLFSSSLPNIEEINKTTNVVD-KK 86
T +KR K+ I + + + + D EI N Y+ KL+S N++EI++ +
Sbjct: 380 TRKKRVKSLISSIRNGNDEITTDPSEIQKILNEYYKKLYSHKYENLKEIDQYLEACHLPR 439
Query: 87 LTEEQVIWMDRDFTKEEIEAALKSMNPPKASGPDGAHALFFQKYWGILGIDISDMCLKVL 146
L++++V ++R + EI + ++++ K+ GPDG + F+Q + L + ++ +
Sbjct: 440 LSQKEVEMLNRPISSSEIASTIQNLPKKKSPGPDGFTSEFYQTFKEELVPILLNLFQNIE 499
Query: 147 NQGESVEELNNTLISLIPK-CKDPKRMSDFRPITLCNVTYKLIAKTLANRLKKVLNSIIA 206
+G I+LIPK KDP R ++RPI+L N+ K++ K L NR+++ + II
Sbjct: 500 KEGILPNTFYEANITLIPKPGKDPTRKENYRPISLMNIDAKILNKILTNRIQQHIKKIIH 559
Query: 207 QNQSAFV--SERLIITDNVILDFESIHAPDNRKMGKKGFLAMKLDMGKAFDRVEWAYIDK 266
+Q F+ S+ I + I+ K+ K + + +D KAFD ++ ++ +
Sbjct: 560 HDQVGFIPGSQGWFNIRKSINVIQHIN-----KLKNKDHMILSIDAEKAFDNIQHPFMIR 619
Query: 267 IMSHMG 268
+ +G
Sbjct: 620 TLKKIG 620
BLAST of Lcy06g012580 vs. ExPASy TrEMBL
Match:
A0A7N2L6Z9 (Reverse transcriptase domain-containing protein OS=Quercus lobata OX=97700 PE=4 SV=1)
HSP 1 Score: 272.7 bits (696), Expect = 1.6e-69
Identity = 135/270 (50.00%), Postives = 193/270 (71.48%), Query Frame = 0
Query: 1 MYWKIRSREDWLKWGDKNIKWFHSRATHRKRKNEIKGLEDDHSKWINDEEEIGSATNSYF 60
++W RS+ WLK GD+N K+FH+RA+ R+++N I G+ D +W D + I +A +YF
Sbjct: 213 IFWGQRSKVHWLKEGDRNTKFFHARASERRKQNTISGVWDKFGRWCEDRDSIANAAVTYF 272
Query: 61 MKLFSSSLPNIEEINKTTNVVDKKLTEEQVIWMDRDFTKEEIEAALKSMNPPKASGPDGA 120
++S+S P++ +++ T + +TEE + R FT+EEI ALK ++P K+ GPDG
Sbjct: 273 EDIYSTSNPSM--VDEVTAAIPTMITEEMNTELSRCFTREEIVTALKQIHPTKSPGPDGM 332
Query: 121 HALFFQKYWGILGIDISDMCLKVLNQGESVEELNNTLISLIPKCKDPKRMSDFRPITLCN 180
A+FFQKYW I+G ++S+M L VLN G S++ +N T I LIPK +PKRM+DFRPI+LCN
Sbjct: 333 SAIFFQKYWDIVGSNVSNMILNVLNYGMSLDVINKTNIVLIPKTSNPKRMTDFRPISLCN 392
Query: 181 VTYKLIAKTLANRLKKVLNSIIAQNQSAFVSERLIITDNVILDFESIHAPDNRKMGKKGF 240
V YKLI+KTLANRLK L II +NQSAF ++RL ITDNV++ +E +H ++K GK F
Sbjct: 393 VIYKLISKTLANRLKAFLPLIITENQSAFTADRL-ITDNVLIAYELMHYLKHKKDGKDCF 452
Query: 241 LAMKLDMGKAFDRVEWAYIDKIMSHMGFSD 271
+A KLDM KAFDRVEW +I+++M MGF++
Sbjct: 453 MATKLDMSKAFDRVEWGFIERVMRKMGFNE 479
BLAST of Lcy06g012580 vs. ExPASy TrEMBL
Match:
A0A7N2LT95 (Reverse transcriptase domain-containing protein OS=Quercus lobata OX=97700 PE=4 SV=1)
HSP 1 Score: 265.4 bits (677), Expect = 2.6e-67
Identity = 130/268 (48.51%), Postives = 186/268 (69.40%), Query Frame = 0
Query: 3 WKIRSREDWLKWGDKNIKWFHSRATHRKRKNEIKGLEDDHSKWINDEEEIGSATNSYFMK 62
WK E WL+ GDKN K+FH AT RKRKN IKGL+DD W +E ++ Y+ +
Sbjct: 580 WK-AEMESWLQSGDKNTKFFHGTATQRKRKNFIKGLKDDEGVWHEEENQVSGLLIEYYSQ 639
Query: 63 LFSSSLPNIEEINKTTNVVDKKLTEEQVIWMDRDFTKEEIEAALKSMNPPKASGPDGAHA 122
LFS+S P+ + ++ + VD +TEE + + R +T ++++AA++ M P KA GPDG
Sbjct: 640 LFSTSHPH--DFDRILDGVDTIVTEEMRVELVRPYTSDKVDAAIEEMAPLKAPGPDGMPP 699
Query: 123 LFFQKYWGILGIDISDMCLKVLNQGESVEELNNTLISLIPKCKDPKRMSDFRPITLCNVT 182
LF+Q YW +G+D+ L LN G ++ +N+T I+LIPK +PK++SDFRPI+LCNV
Sbjct: 700 LFYQTYWSDVGVDVHQAVLSSLNSGSILKSINHTFITLIPKVNNPKKVSDFRPISLCNVI 759
Query: 183 YKLIAKTLANRLKKVLNSIIAQNQSAFVSERLIITDNVILDFESIHAPDNRKMGKKGFLA 242
YK+I+K +ANRLK +LNSII++ QSAF + RL ITDN+++ FES+H G+KGF+A
Sbjct: 760 YKIISKVIANRLKPLLNSIISKTQSAFTANRL-ITDNILIAFESLHHMKTNCTGRKGFMA 819
Query: 243 MKLDMGKAFDRVEWAYIDKIMSHMGFSD 271
+KLDM KA+DRVEW +++KI+ MGF D
Sbjct: 820 LKLDMSKAYDRVEWVFLEKILLKMGFQD 843
BLAST of Lcy06g012580 vs. ExPASy TrEMBL
Match:
A0A2N9GIC4 (Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS27062 PE=4 SV=1)
HSP 1 Score: 261.5 bits (667), Expect = 3.8e-66
Identity = 132/269 (49.07%), Postives = 185/269 (68.77%), Query Frame = 0
Query: 3 WKIRSREDWLKWGDKNIKWFHSRATHRKRKNEIKGLEDDHSKWINDEEEIGSATNSYFMK 62
W+ RSR WL GD+N K+FHSRAT R R+N I GL+DD KW + + + S Y+
Sbjct: 685 WRQRSRSLWLANGDRNTKYFHSRATQRHRRNHIHGLKDDMDKWHDTNDGMASLLIKYYTS 744
Query: 63 LFSSSLPNIEEINKTTNVVDKKLTEEQVIWMDRDFTKEEIEAALKSMNPPKASGPDGAHA 122
LFS+S P ++I + V +TE+ + R FT E+E ALK M P KA GPDG
Sbjct: 745 LFSTSHP--DQIAEVVTHVPHVVTEDMNKALIRKFTAPEVELALKQMAPTKAPGPDGMPP 804
Query: 123 LFFQKYWGILGIDISDMCLKVLNQGESVEELNNTLISLIPKCKDPKRMSDFRPITLCNVT 182
+F+QK+W ++G D++ L LN G ++ +N+T ISLIPK K+P+R+++FRPI+LCNV
Sbjct: 805 VFYQKFWHVVGGDVTKAVLSCLNSGRILKSINHTFISLIPKTKNPERVTEFRPISLCNVI 864
Query: 183 YKLIAKTLANRLKKVLNSIIAQNQSAFVSERLIITDNVILDFESIHAPDNRKMGKKGFLA 242
YKLI+K LANRLK +L +++ +QSAFV RL ITDNV++ FE++H + K+G+ G +A
Sbjct: 865 YKLISKVLANRLKLILPQVVSDSQSAFVPGRL-ITDNVLVAFETLHYMHHNKIGRDGAMA 924
Query: 243 MKLDMGKAFDRVEWAYIDKIMSHMGFSDK 272
+KLDM KA+DRVEW +++KIMS MGF K
Sbjct: 925 LKLDMSKAYDRVEWCFLEKIMSQMGFHKK 950
BLAST of Lcy06g012580 vs. ExPASy TrEMBL
Match:
A0A2N9G3I8 (Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS21623 PE=4 SV=1)
HSP 1 Score: 261.5 bits (667), Expect = 3.8e-66
Identity = 126/270 (46.67%), Postives = 185/270 (68.52%), Query Frame = 0
Query: 2 YWKIRSREDWLKWGDKNIKWFHSRATHRKRKNEIKGLEDDHSKWINDEEEIGSATNSYFM 61
+W+ RSR WL GD+N K+FH RAT R+R+N + L D+ +W EEI Y+
Sbjct: 781 FWRQRSRTSWLAQGDRNTKYFHGRATQRRRRNSVSKLCDERGRWHESNEEIAELMIEYYT 840
Query: 62 KLFSSSLPNIEEINKTTNVVDKKLTEEQVIWMDRDFTKEEIEAALKSMNPPKASGPDGAH 121
LF++S P + + T+ V K +T E + R+F EE+E A++ M P KA GPDG
Sbjct: 841 TLFTTSNPT--HLAEATSEVQKVVTLEMNNNLTREFKAEEVEQAIQQMAPSKAPGPDGMP 900
Query: 122 ALFFQKYWGILGIDISDMCLKVLNQGESVEELNNTLISLIPKCKDPKRMSDFRPITLCNV 181
+F+QKYW ++G D++ L LN G ++ +N+T I+LIPK K+P++++DFRPI+LCNV
Sbjct: 901 PIFYQKYWHVVGSDVTTAVLSCLNSGSLLKSINHTFITLIPKVKNPEKVTDFRPISLCNV 960
Query: 182 TYKLIAKTLANRLKKVLNSIIAQNQSAFVSERLIITDNVILDFESIHAPDNRKMGKKGFL 241
YKL++K LANRLK +L +++ +QSAFV RL ITDNV++ FE++H + K+G++G +
Sbjct: 961 IYKLVSKVLANRLKVILPQLVSDSQSAFVPGRL-ITDNVLVAFETLHHMHHNKIGREGAM 1020
Query: 242 AMKLDMGKAFDRVEWAYIDKIMSHMGFSDK 272
AMKLDM KA+DRVEW+Y+++IM MGF K
Sbjct: 1021 AMKLDMSKAYDRVEWSYLEQIMKKMGFHQK 1047
BLAST of Lcy06g012580 vs. ExPASy TrEMBL
Match:
A0A2K3NDN7 (Ribonuclease H (Fragment) OS=Trifolium pratense OX=57577 GN=L195_g024447 PE=4 SV=1)
HSP 1 Score: 260.4 bits (664), Expect = 8.5e-66
Identity = 128/269 (47.58%), Postives = 182/269 (67.66%), Query Frame = 0
Query: 3 WKIRSREDWLKWGDKNIKWFHSRATHRKRKNEIKGLEDDHSKWINDEEEIGSATNSYFMK 62
W+ RSR WLK GDKN K+FH +A+ RK+ N IK L+DD W + ++ + YF+
Sbjct: 303 WRQRSRATWLKDGDKNTKFFHGKASQRKKTNCIKKLKDDDGIWWSGQDNVEKVFLHYFVD 362
Query: 63 LFSSSLPNIEEINKTTNVVDKKLTEEQVIWMDRDFTKEEIEAALKSMNPPKASGPDGAHA 122
LFSSS P ++ +T + K+L + V W ++ FT EEI+A + M+P KA GPDG A
Sbjct: 363 LFSSSNP--VDVEQTCEAIQKRLLPDHVEWCNQRFTAEEIKATVDQMHPLKAPGPDGLPA 422
Query: 123 LFFQKYWGILGIDISDMCLKVLNQGESVEELNNTLISLIPKCKDPKRMSDFRPITLCNVT 182
LFFQ+YW I+G DI D+ L +LN+G+S E +N T I+LIPKCK+P FRPI+LCNVT
Sbjct: 423 LFFQEYWHIVGNDIIDLSLGILNEGKSPEVINKTFIALIPKCKNPSAPKQFRPISLCNVT 482
Query: 183 YKLIAKTLANRLKKVLNSIIAQNQSAFVSERLIITDNVILDFESIHAPDNRKMGKKGFLA 242
K++ KT+ANR+K +L ++ + QSAFV RL ITDN ++ E H + GK+G +A
Sbjct: 483 MKIVTKTIANRIKSILPDVVDEEQSAFVKGRL-ITDNALIAMECFHWLKKKVKGKRGTMA 542
Query: 243 MKLDMGKAFDRVEWAYIDKIMSHMGFSDK 272
+KLDM KA+DR+EWA+I ++ +MGF ++
Sbjct: 543 LKLDMAKAYDRMEWAFIRGVLHNMGFPER 568
BLAST of Lcy06g012580 vs. NCBI nr
Match:
XP_023878301.1 (uncharacterized protein LOC111990748 [Quercus suber])
HSP 1 Score: 290.0 bits (741), Expect = 2.1e-74
Identity = 144/270 (53.33%), Postives = 197/270 (72.96%), Query Frame = 0
Query: 2 YWKIRSREDWLKWGDKNIKWFHSRATHRKRKNEIKGLEDDHSKWINDEEEIGSATNSYFM 61
YW R++ WLK GD+N K+FH++A+ R+++N I G+ D+ +W ++EE I A SYF
Sbjct: 299 YWGQRAKAHWLKEGDRNTKFFHAQASERRKQNTIVGIWDEQGRWCDNEESIAQAAISYFN 358
Query: 62 KLFSSSLPNIEEINKTTNVVDKKLTEEQVIWMDRDFTKEEIEAALKSMNPPKASGPDGAH 121
++SSS P+ +I + T + K+TEE + R+FTKEE+ ALK ++P KA GPDG
Sbjct: 359 NIYSSSHPS--QIEEVTEAIPFKVTEEMNESLIREFTKEEVAVALKQIHPNKAPGPDGMS 418
Query: 122 ALFFQKYWGILGIDISDMCLKVLNQGESVEELNNTLISLIPKCKDPKRMSDFRPITLCNV 181
A+FFQKYW I+G +++DM L VLN + ELN T ISLIPK +PKRM+DFRPI+LCNV
Sbjct: 419 AVFFQKYWSIVGNNVTDMVLNVLNHNLPIPELNKTNISLIPKTNNPKRMTDFRPISLCNV 478
Query: 182 TYKLIAKTLANRLKKVLNSIIAQNQSAFVSERLIITDNVILDFESIHAPDNRKMGKKGFL 241
YKLI+K LANRLK +L II++NQSAF S+RL ITDNV++ FE +H D++ GK+GF+
Sbjct: 479 VYKLISKILANRLKPLLPHIISENQSAFTSDRL-ITDNVLVAFELMHYLDHKTAGKEGFM 538
Query: 242 AMKLDMGKAFDRVEWAYIDKIMSHMGFSDK 272
A+KLDM KAFDRVEW +I K+M MGF ++
Sbjct: 539 AIKLDMSKAFDRVEWGFIAKVMEQMGFCNR 565
BLAST of Lcy06g012580 vs. NCBI nr
Match:
XP_023881891.1 (uncharacterized protein LOC111994244 [Quercus suber])
HSP 1 Score: 278.1 bits (710), Expect = 8.1e-71
Identity = 139/269 (51.67%), Postives = 191/269 (71.00%), Query Frame = 0
Query: 3 WKIRSREDWLKWGDKNIKWFHSRATHRKRKNEIKGLEDDHSKWINDEEEIGSATNSYFMK 62
W+ RSR WL GD+N K+FH++A+ R+R+N I G+ D++ W + E I SYF
Sbjct: 176 WQQRSRVQWLGLGDRNTKYFHTKASDRRRRNTINGIMDENGNWQDSTEGIAKVAVSYFQT 235
Query: 63 LFSSSLPNIEEINKTTNVVDKKLTEEQVIWMDRDFTKEEIEAALKSMNPPKASGPDGAHA 122
++SSS+P I++ + + +TEE + ++FT+EEIE AL M+P KA GPDG A
Sbjct: 236 IYSSSVPT--RISEVLDAIPTTVTEEMNHSLIQEFTREEIETALNQMHPTKAPGPDGMSA 295
Query: 123 LFFQKYWGILGIDISDMCLKVLNQGESVEELNNTLISLIPKCKDPKRMSDFRPITLCNVT 182
+FFQKYW I+G DI M L VLN S+ E+N T I+L+PK K+P +MSDFRPI+LCNV
Sbjct: 296 IFFQKYWNIVGNDIVCMVLDVLNSNMSMVEINKTNITLVPKIKNPTKMSDFRPISLCNVV 355
Query: 183 YKLIAKTLANRLKKVLNSIIAQNQSAFVSERLIITDNVILDFESIHAPDNRKMGKKGFLA 242
YKLI+K LANRLK +L II++NQSAF+S RL ITDNV++ FE +H +++K GK+GF A
Sbjct: 356 YKLISKVLANRLKNILPQIISENQSAFLSGRL-ITDNVLVAFELMHYLEHKKEGKEGFAA 415
Query: 243 MKLDMGKAFDRVEWAYIDKIMSHMGFSDK 272
+KLDM KA+DRVEW +I ++M MGF +K
Sbjct: 416 IKLDMSKAYDRVEWGFIKQVMEKMGFHEK 441
BLAST of Lcy06g012580 vs. NCBI nr
Match:
XP_023908235.1 (uncharacterized protein LOC112019924 [Quercus suber])
HSP 1 Score: 268.1 bits (684), Expect = 8.4e-68
Identity = 131/270 (48.52%), Postives = 184/270 (68.15%), Query Frame = 0
Query: 1 MYWKIRSREDWLKWGDKNIKWFHSRATHRKRKNEIKGLEDDHSKWINDEEEIGSATNSYF 60
+YW RSR WLK GDKN K+FHS+A+ R+R+N IKG+ W+ + EEI + YF
Sbjct: 632 IYWAQRSRIPWLKHGDKNTKYFHSKASQRRRRNFIKGIRSAQGNWVEEMEEIANVATGYF 691
Query: 61 MKLFSSSLPNIEEINKTTNVVDKKLTEEQVIWMDRDFTKEEIEAALKSMNPPKASGPDGA 120
LF + N +++ + N V +K+T E + +F EE++ AL M P KA GPDG
Sbjct: 692 DNLFCAG--NCDQMEECLNAVPRKVTPEMHDTLSSEFNAEEVKLALFQMGPTKAPGPDGM 751
Query: 121 HALFFQKYWGILGIDISDMCLKVLNQGESVEELNNTLISLIPKCKDPKRMSDFRPITLCN 180
+ALF+QK+W ++G + D L LN G ++N+T I LIPK K+P++MSDFRPI+LCN
Sbjct: 752 NALFYQKFWHVVGDTVVDAVLDFLNNGHMAPDINHTYIVLIPKVKNPEKMSDFRPISLCN 811
Query: 181 VTYKLIAKTLANRLKKVLNSIIAQNQSAFVSERLIITDNVILDFESIHAPDNRKMGKKGF 240
V YK+I+K L NRLK+VL +II+ QSAFV RL ITDNV+L +E++H +RK GKKG+
Sbjct: 812 VIYKIISKVLVNRLKQVLPNIISPTQSAFVPGRL-ITDNVLLAYETLHTMHSRKKGKKGY 871
Query: 241 LAMKLDMGKAFDRVEWAYIDKIMSHMGFSD 271
+A+KLD+ KA+DRVEW ++ IM +GF +
Sbjct: 872 MALKLDVSKAYDRVEWPFLQGIMQRLGFPE 898
BLAST of Lcy06g012580 vs. NCBI nr
Match:
XP_006491472.1 (uncharacterized protein LOC102626455 [Citrus sinensis])
HSP 1 Score: 267.3 bits (682), Expect = 1.4e-67
Identity = 130/271 (47.97%), Postives = 191/271 (70.48%), Query Frame = 0
Query: 1 MYWKIRSREDWLKWGDKNIKWFHSRATHRKRKNEIKGLEDDHSKWINDEEEIGSATNSYF 60
+YWK RSR DWLK GDKN K+FHS+A+ R+RKN+I G+EDD W++D E I +F
Sbjct: 427 VYWKQRSRADWLKEGDKNTKFFHSKASARRRKNKIWGVEDDQGNWVDDPEGIEGEFCGFF 486
Query: 61 MKLFSSSLPNIEEINKTTNVVDKKLTEEQVIWMDRDFTKEEIEAALKSMNPPKASGPDGA 120
+LF+SS P+ +I++ + K+++E ++ FT E+I AL M P KA GPDG
Sbjct: 487 QQLFTSSNPSQTQISEALKGLLPKVSQEMNTHLEEPFTPEDITRALSEMCPTKAPGPDGL 546
Query: 121 HALFFQKYWGILGIDISDMCLKVLNQGESVEELNNTLISLIPKCKDPKRMSDFRPITLCN 180
A FFQK+W I+G ++ CL +LN+ +++ LN+T I+LIPK + P+++ +FRPI+LCN
Sbjct: 547 PAAFFQKHWQIVGEGLTKTCLHILNEQGTLDSLNHTFIALIPKVEKPRKVMEFRPISLCN 606
Query: 181 VTYKLIAKTLANRLKKVLNSIIAQNQSAFVSERLIITDNVILDFESIHAPDNRKMGKKGF 240
V Y+++AK +ANRLK +LN II+ NQSAF+ RL ITDNVI+ +E +H K + G
Sbjct: 607 VVYRIVAKAIANRLKPILNHIISPNQSAFIPNRL-ITDNVIIGYECLHKIRLSKGRRNGL 666
Query: 241 LAMKLDMGKAFDRVEWAYIDKIMSHMGFSDK 272
+A+KLD+ KA+DRVEW ++++ MS++GFS K
Sbjct: 667 VALKLDISKAYDRVEWNFLEQTMSNLGFSAK 696
BLAST of Lcy06g012580 vs. NCBI nr
Match:
XP_030923330.1 (uncharacterized protein LOC115950239 [Quercus lobata])
HSP 1 Score: 264.6 bits (675), Expect = 9.3e-67
Identity = 130/268 (48.51%), Postives = 186/268 (69.40%), Query Frame = 0
Query: 1 MYWKIRSREDWLKWGDKNIKWFHSRATHRKRKNEIKGLEDDHSKWINDEEEIGSATNSYF 60
+YW RSR +WL+ GD+N K+FH++A+ R+RKN I+G+ + +W+ + EE+G YF
Sbjct: 735 IYWAQRSRINWLRHGDRNTKFFHAKASQRRRKNFIRGIRNSQGQWVENLEEVGQVAADYF 794
Query: 61 MKLFSSSLPNIEEINKTTNVVDKKLTEEQVIWMDRDFTKEEIEAALKSMNPPKASGPDGA 120
LF + +++ + + VD K+TE+ ++ FT EE++AAL M P KA GPDG
Sbjct: 795 DNLFQAGAG--DQMEECLDAVDTKVTEDMREFLSNQFTAEEVQAALFQMGPTKAPGPDGM 854
Query: 121 HALFFQKYWGILGIDISDMCLKVLNQGESVEELNNTLISLIPKCKDPKRMSDFRPITLCN 180
+ALF+QK+W I+G + L LN G + E+N+T I LIPK ++P+RMS+FRPI+LCN
Sbjct: 855 NALFYQKFWHIVGDSVVSAVLDFLNNGNMLPEINHTNIVLIPKVQNPERMSEFRPISLCN 914
Query: 181 VTYKLIAKTLANRLKKVLNSIIAQNQSAFVSERLIITDNVILDFESIHAPDNRKMGKKGF 240
V YK+I+K LANRLK+VL II+ QSAFV RL ITDNV++ +E++H RK GKKG
Sbjct: 915 VIYKIISKVLANRLKQVLPQIISSTQSAFVPGRL-ITDNVLVAYETLHTMHARKKGKKGD 974
Query: 241 LAMKLDMGKAFDRVEWAYIDKIMSHMGF 269
+A+KLD+ KA+DRVEW ++ IM MGF
Sbjct: 975 VALKLDISKAYDRVEWHFLQSIMEKMGF 999
BLAST of Lcy06g012580 vs. TAIR 10
Match:
AT1G43760.1 (DNAse I-like superfamily protein )
HSP 1 Score: 73.2 bits (178), Expect = 3.7e-13
Identity = 49/187 (26.20%), Postives = 88/187 (47.06%), Query Frame = 0
Query: 2 YWKIRSREDWLKWGDKNIKWFHSRATHRKRKNEIKGLEDDHSKWINDEEEIGSATNSYFM 61
+++ +SR WL+ GD N ++FH + KN IK L D + + ++ +Y+
Sbjct: 434 FYRQKSRIKWLQDGDANTRFFHKVILANQAKNLIKFLRMDDDVRVENVTQVKEMIVAYYT 493
Query: 62 KLF--SSSLPNIEEINKTTNVVDKKLTEEQVIWMDRDFTKEEIEAALKSMNPPKASGPDG 121
L S + + + + ++ + + + + +EI AA+ +M KA GPD
Sbjct: 494 HLLGSDSDILTPDSVQRIKDIHPFRCNDTLASRLSALPSDKEITAAVFAMPRNKAPGPDS 553
Query: 122 AHALFFQKYWGILGIDISDMCLKVLNQGESVEELNNTLISLIPKCKDPKRMSDFRPITLC 181
A FF + W ++ + G ++ N T I+LIPK ++S FRP++ C
Sbjct: 554 FTAEFFWESWFVVKDSTIAAVKEFFRTGHLLKRFNATAITLIPKVTGVDQLSMFRPVSCC 613
Query: 182 NVTYKLI 187
V YK+I
Sbjct: 614 TVVYKII 620
BLAST of Lcy06g012580 vs. TAIR 10
Match:
AT4G20520.1 (RNA binding;RNA-directed DNA polymerases )
HSP 1 Score: 61.6 bits (148), Expect = 1.1e-09
Identity = 28/81 (34.57%), Postives = 52/81 (64.20%), Query Frame = 0
Query: 190 LANRLKKVLNSIIAQNQSAFVSERLIITDNVILDFESIHAPDNRKMGKKGFLAMKLDMGK 249
+ RLK ++ ++I Q++F+ R + TDN++ E++H+ RK G KG++ +KLD+ K
Sbjct: 1 MVERLKPLMTNLIGPAQASFIPGR-VSTDNIVFVQEAVHSM-RRKKGVKGWMLLKLDLEK 60
Query: 250 AFDRVEWAYIDKIMSHMGFSD 271
A+DR+ W Y++ + GF +
Sbjct: 61 AYDRIRWDYLEDTLISAGFPE 79
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
P11369 | 2.1e-21 | 29.36 | LINE-1 retrotransposable element ORF2 protein OS=Mus musculus OX=10090 GN=Pol PE... | [more] |
P14381 | 2.3e-20 | 30.23 | Transposon TX1 uncharacterized 149 kDa protein OS=Xenopus laevis OX=8355 PE=4 SV... | [more] |
O00370 | 6.3e-18 | 26.97 | LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens OX=9606 PE=1 SV=1 | [more] |
P08548 | 3.1e-17 | 26.02 | LINE-1 reverse transcriptase homolog OS=Nycticebus coucang OX=9470 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
A0A7N2L6Z9 | 1.6e-69 | 50.00 | Reverse transcriptase domain-containing protein OS=Quercus lobata OX=97700 PE=4 ... | [more] |
A0A7N2LT95 | 2.6e-67 | 48.51 | Reverse transcriptase domain-containing protein OS=Quercus lobata OX=97700 PE=4 ... | [more] |
A0A2N9GIC4 | 3.8e-66 | 49.07 | Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=F... | [more] |
A0A2N9G3I8 | 3.8e-66 | 46.67 | Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=F... | [more] |
A0A2K3NDN7 | 8.5e-66 | 47.58 | Ribonuclease H (Fragment) OS=Trifolium pratense OX=57577 GN=L195_g024447 PE=4 SV... | [more] |
Match Name | E-value | Identity | Description | |
AT1G43760.1 | 3.7e-13 | 26.20 | DNAse I-like superfamily protein | [more] |
AT4G20520.1 | 1.1e-09 | 34.57 | RNA binding;RNA-directed DNA polymerases | [more] |