Lcy03g018730.1 (mRNA) Sponge gourd (P93075) v1

Overview
NameLcy03g018730.1
TypemRNA
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Descriptionglycine-rich cell wall structural protein 2-like
LocationChr03: 52431545 .. 52432574 (+)
Sequence length1030
RNA-Seq ExpressionLcy03g018730.1
SyntenyLcy03g018730.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GAAAACCCAGCACTTGAACTCCACTACTGGAAGTGGGGGTGGGGGTGGACAGACTCTAAACACTTGGCGAAATCCTCGCGAAGTTCCAGAAACCACCAAAACTGGTTTAACAATACAACATTTCTACGCTACTGATCACTTTTCCTGCACCTTCAACTACTATAAATACCCCATCTCCGTTTTGCTTTGGCCATGCAACAACAAACCATTTTCTCAAATTCTCGCTTCCTGTCCTTCCCTTAAACCCTTCTCATTCAACCTTTAATAAAACTACACCACAAAATCAAATGGCTTCCATCAGGGCTGTTACCATTGTTGCCTTGGTACTTGGCGTGTCTTTCATTGTATCAGAAAGCCGCGTCGCCAGGAAGGACTTGGGCCTCGACCTTGGCGGAGTCGGCCTCGGTGTTGGCACGGGAGTGGGCTTGGGATTAGGCGGTGGTAGTGGTAGTGGCAGTGGCAGTGGCTCGGGTTCCGGATCCGGGTCTGGCTCCGGTTCCGGATCTGGGTCCAGTTCTGCTTCCTCATCACACTCCTCAAGCTCCAGCTCTGGCTCCGACGCTGGATCCGAAGCCGGTTCGTACGCTGGTTCTCATGCGGGGTCTCGGGCTGGATCAGGGTCGGGTAGAAACAGGAACAATGGTGGATCCGGATCCGGGTCGGGTTCAGGATATGGTGCTGGTTCAGGCAGGGGAAGCGGCTCGGGCGGCGGTGAAGGATATGGTGAGGGCCATGGCTACGGCGAGGGGCATGGCTATGGCAATGACAATGGCGGCGAAAACTGAGATCAAAACTGATGATTATAATGGAATTAATTAAGGATGATCATCGTCTTTTTTTTTTTTTGGTACATAGATGAATAAAGGCTTTACAGGTGATGAATCCTGATTATTCCTGCTTTATTCTAGTTTCAATCATGTCAGCTGTATGTGTAATGAATTAGGGAATGTAATGCCATATGTAAATATTGAATAAATGTTTTTTTTTTTTTTTGAAATCTAAATATTGAATAAATGTTGCTATTTACTAT

mRNA sequence

GAAAACCCAGCACTTGAACTCCACTACTGGAAGTGGGGGTGGGGGTGGACAGACTCTAAACACTTGGCGAAATCCTCGCGAAGTTCCAGAAACCACCAAAACTGGTTTAACAATACAACATTTCTACGCTACTGATCACTTTTCCTGCACCTTCAACTACTATAAATACCCCATCTCCGTTTTGCTTTGGCCATGCAACAACAAACCATTTTCTCAAATTCTCGCTTCCTGTCCTTCCCTTAAACCCTTCTCATTCAACCTTTAATAAAACTACACCACAAAATCAAATGGCTTCCATCAGGGCTGTTACCATTGTTGCCTTGGTACTTGGCGTGTCTTTCATTGTATCAGAAAGCCGCGTCGCCAGGAAGGACTTGGGCCTCGACCTTGGCGGAGTCGGCCTCGGTGTTGGCACGGGAGTGGGCTTGGGATTAGGCGGTGGTAGTGGTAGTGGCAGTGGCAGTGGCTCGGGTTCCGGATCCGGGTCTGGCTCCGGTTCCGGATCTGGGTCCAGTTCTGCTTCCTCATCACACTCCTCAAGCTCCAGCTCTGGCTCCGACGCTGGATCCGAAGCCGGTTCGTACGCTGGTTCTCATGCGGGGTCTCGGGCTGGATCAGGGTCGGGTAGAAACAGGAACAATGGTGGATCCGGATCCGGGTCGGGTTCAGGATATGGTGCTGGTTCAGGCAGGGGAAGCGGCTCGGGCGGCGGTGAAGGATATGGTGAGGGCCATGGCTACGGCGAGGGGCATGGCTATGGCAATGACAATGGCGGCGAAAACTGAGATCAAAACTGATGATTATAATGGAATTAATTAAGGATGATCATCGTCTTTTTTTTTTTTTGGTACATAGATGAATAAAGGCTTTACAGGTGATGAATCCTGATTATTCCTGCTTTATTCTAGTTTCAATCATGTCAGCTGTATGTGTAATGAATTAGGGAATGTAATGCCATATGTAAATATTGAATAAATGTTTTTTTTTTTTTTTGAAATCTAAATATTGAATAAATGTTGCTATTTACTAT

Coding sequence (CDS)

ATGGCTTCCATCAGGGCTGTTACCATTGTTGCCTTGGTACTTGGCGTGTCTTTCATTGTATCAGAAAGCCGCGTCGCCAGGAAGGACTTGGGCCTCGACCTTGGCGGAGTCGGCCTCGGTGTTGGCACGGGAGTGGGCTTGGGATTAGGCGGTGGTAGTGGTAGTGGCAGTGGCAGTGGCTCGGGTTCCGGATCCGGGTCTGGCTCCGGTTCCGGATCTGGGTCCAGTTCTGCTTCCTCATCACACTCCTCAAGCTCCAGCTCTGGCTCCGACGCTGGATCCGAAGCCGGTTCGTACGCTGGTTCTCATGCGGGGTCTCGGGCTGGATCAGGGTCGGGTAGAAACAGGAACAATGGTGGATCCGGATCCGGGTCGGGTTCAGGATATGGTGCTGGTTCAGGCAGGGGAAGCGGCTCGGGCGGCGGTGAAGGATATGGTGAGGGCCATGGCTACGGCGAGGGGCATGGCTATGGCAATGACAATGGCGGCGAAAACTGA

Protein sequence

MASIRAVTIVALVLGVSFIVSESRVARKDLGLDLGGVGLGVGTGVGLGLGGGSGSGSGSGSGSGSGSGSGSGSGSSSASSSHSSSSSSGSDAGSEAGSYAGSHAGSRAGSGSGRNRNNGGSGSGSGSGYGAGSGRGSGSGGGEGYGEGHGYGEGHGYGNDNGGEN
Homology
BLAST of Lcy03g018730.1 vs. ExPASy TrEMBL
Match: A0A6J1E1T0 (glycine-rich cell wall structural protein 2-like OS=Cucurbita moschata OX=3662 GN=LOC111430015 PE=4 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 1.8e-34
Identity = 134/166 (80.72%), Postives = 141/166 (84.94%), Query Frame = 0

Query: 1   MASIRAVTIVALVLGVSFIVSESRVARKDLGLDLGGVGLGVGTGVGLGLGGGSGSGSGSG 60
           MASIRAV+I+AL+L +S IVSESRVAR DLGLDLGGVG+G+GTGVGLGLG       GSG
Sbjct: 1   MASIRAVSILALLLALSVIVSESRVARMDLGLDLGGVGVGIGTGVGLGLG-------GSG 60

Query: 61  SGSGSGSGSGSGSGSSSASSSHSSSSSSGSDAGSEAGSYAGSHAGSRAGSGSGRNRNNG- 120
           SGSGSGSGSGSGSGSSSASSSHSSSSSSGSDAGSEAGSYAGS+    AGSGSGRNRN G 
Sbjct: 61  SGSGSGSGSGSGSGSSSASSSHSSSSSSGSDAGSEAGSYAGSY----AGSGSGRNRNGGS 120

Query: 121 GSGSGSGSGYGAGSGRGSGSGGGEGYGEGHGYGEGHGYGNDNGGEN 166
           GSGSGSGSGYGAGSGRGSGSGGGEGYGEGHGYG        N GEN
Sbjct: 121 GSGSGSGSGYGAGSGRGSGSGGGEGYGEGHGYG--------NDGEN 147

BLAST of Lcy03g018730.1 vs. ExPASy TrEMBL
Match: A0A1S3B8Y8 (putative glycine-rich cell wall structural protein 1 OS=Cucumis melo OX=3656 GN=LOC103487315 PE=4 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 3.2e-31
Identity = 124/165 (75.15%), Postives = 129/165 (78.18%), Query Frame = 0

Query: 1   MASIRAVTIVALVLGVSFIVSESRVARKDLGLDLGGVGLGVGTGVGLGLGGGSGSGSGSG 60
           MASIR V +V  +LGVS IVSESRVARKDLGLDLGG+GLGVGTGVGLGL           
Sbjct: 1   MASIRGVAVVTFLLGVSVIVSESRVARKDLGLDLGGMGLGVGTGVGLGL----------- 60

Query: 61  SGSGSGSGSGSGSGSSSASSSHSSSSSSGSDAGSEAGSYAGSHAGSRAGSGSGRNRNNGG 120
              GSGSG GSG GSSSASSSHSSSSSSGSDAGSEAGSYAGS+AGSRAGSGSGRNR NGG
Sbjct: 61  --DGSGSGFGSGPGSSSASSSHSSSSSSGSDAGSEAGSYAGSYAGSRAGSGSGRNR-NGG 120

Query: 121 SGSGSGSGYGAGSGRGSGSGGGEGYGEGHGYGEGHGYGNDNGGEN 166
           SGSGSG+G            GGEGYGEGHGYGEGHGYG  NGGEN
Sbjct: 121 SGSGSGTG-----------NGGEGYGEGHGYGEGHGYG--NGGEN 138

BLAST of Lcy03g018730.1 vs. ExPASy TrEMBL
Match: A0A6J1E521 (putative glycine-rich cell wall structural protein 1 isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111430014 PE=4 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 1.3e-29
Identity = 119/161 (73.91%), Postives = 133/161 (82.61%), Query Frame = 0

Query: 1   MASIRAVTIVALVLGVSFIVSESRVARKDLGLDLGGVGLGVGTGVGLGLGGGSGSGSGSG 60
           MASI ++ +V  +L  S I+S++RVARKDLGLDLGG+G+G+GTG+GLGLG     GSGSG
Sbjct: 1   MASINSLIVVCFLLSFSVILSQARVARKDLGLDLGGLGVGIGTGIGLGLG-----GSGSG 60

Query: 61  SGSGSGSGSGSGSGSSSASSSHSSSSSSGSDAGSEAGSYAGSHAGSRAGSGSGRNRNNGG 120
           SGSGSGSGSGSGS SSS+SSS+SSSS SGS AGSEAGSY    AGSRAGSGSG NRN   
Sbjct: 61  SGSGSGSGSGSGSSSSSSSSSYSSSSGSGSGAGSEAGSY----AGSRAGSGSGPNRN--- 120

Query: 121 SGSGSGSGYGAGSGRGSGSGGGEGYGEGHGYGEGHGYGNDN 162
            GSGSGSGYG GSGRGSG+GGGEGYGEGHGYGEG GYG  N
Sbjct: 121 GGSGSGSGYGGGSGRGSGNGGGEGYGEGHGYGEGRGYGGGN 149

BLAST of Lcy03g018730.1 vs. ExPASy TrEMBL
Match: A0A6J1E2L1 (cell wall protein IFF6-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111430014 PE=4 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 1.7e-29
Identity = 122/177 (68.93%), Postives = 137/177 (77.40%), Query Frame = 0

Query: 1   MASIRAVTIVALVLGVSFIVSESRVARKDLGLDLGGVGLGVGTGVGLGLGGGSGSGSGSG 60
           MASI ++ +V  +L  S I+S++RVARKDLGLDLGG+G+G+GTG+GLGLG     GSGSG
Sbjct: 1   MASINSLIVVCFLLSFSVILSQARVARKDLGLDLGGLGVGIGTGIGLGLG-----GSGSG 60

Query: 61  SGSGSGSGSGSGSGSSSASSSHSSSSSSGSDAGSEAGSY----------------AGSHA 120
           SGSGSGSGSGSGS SSS+SSS+SSSS SGS AGSEAGSY                AGS+A
Sbjct: 61  SGSGSGSGSGSGSSSSSSSSSYSSSSGSGSGAGSEAGSYAGSRAGSGSGSGAGSEAGSYA 120

Query: 121 GSRAGSGSGRNRNNGGSGSGSGSGYGAGSGRGSGSGGGEGYGEGHGYGEGHGYGNDN 162
           GSRAGSGSG NRN    GSGSGSGYG GSGRGSG+GGGEGYGEGHGYGEG GYG  N
Sbjct: 121 GSRAGSGSGPNRN---GGSGSGSGYGGGSGRGSGNGGGEGYGEGHGYGEGRGYGGGN 169

BLAST of Lcy03g018730.1 vs. ExPASy TrEMBL
Match: A0A1S3B9N0 (glycine-rich cell wall structural protein 2-like OS=Cucumis melo OX=3656 GN=LOC103487316 PE=4 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 3.0e-29
Identity = 117/162 (72.22%), Postives = 133/162 (82.10%), Query Frame = 0

Query: 1   MASIRAVT-IVALVLGVSFIVSESRVARKDLGLDLGGVGLGVGTGVGLGLGGGSGSGSGS 60
           MASI+++  +V L+L  S  +SE RVARKDLG+DLGG+G+G+G G+GLG+G       GS
Sbjct: 1   MASIKSLALVVCLLLSFSVFLSEGRVARKDLGIDLGGLGVGLGAGIGLGIG-------GS 60

Query: 61  GSGSGSGSGSGSGSGSSSASSSHSSSSSSGSDAGSEAGSYAGSHAGSRAGSGSGRNRNNG 120
           GSGSGSGSGSGSGSGSSS+SSS+SSSSSSGS AGSEAGSYAGS+AGSRAGSGSG NRN  
Sbjct: 61  GSGSGSGSGSGSGSGSSSSSSSYSSSSSSGSGAGSEAGSYAGSYAGSRAGSGSGGNRN-- 120

Query: 121 GSGSGSGSGYGAGSGRGSGSGGGEGYGEGHGYGEGHGYGNDN 162
             GSG GSGYG GSGRG  +G GEGYGEGHGYGEGHGYG  N
Sbjct: 121 -GGSGYGSGYGGGSGRGGSNGNGEGYGEGHGYGEGHGYGGGN 152

BLAST of Lcy03g018730.1 vs. NCBI nr
Match: XP_038879815.1 (putative per-hexamer repeat protein 5 [Benincasa hispida])

HSP 1 Score: 174.5 bits (441), Expect = 7.7e-40
Identity = 143/165 (86.67%), Postives = 147/165 (89.09%), Query Frame = 0

Query: 1   MASIRAVTIVALVLGVSFIVSESRVARKDLGLDLGGVGLGVGTGVGLGLGGGSGSGSGSG 60
           MASIRAVTI+A +LGVS IVSE RVAR +LGLDLGGVGLGVGTGVGLGLG       GSG
Sbjct: 1   MASIRAVTILAFLLGVSVIVSEGRVARMNLGLDLGGVGLGVGTGVGLGLG-------GSG 60

Query: 61  SGSGSGSGSGSGSGSSSASSSHSSSSSSGSDAGSEAGSYAGSHAGSRAGSGSGRNRNNGG 120
           SGSGSGSGSGSGSGSSSASSSHSSSSSSGSDAGSEAGSYAGS+AGSRAGSGSGRNR NGG
Sbjct: 61  SGSGSGSGSGSGSGSSSASSSHSSSSSSGSDAGSEAGSYAGSYAGSRAGSGSGRNR-NGG 120

Query: 121 SGSGSGSGYGAGSGRGSGSGGGEGYGEGHGYGEGHGYGNDNGGEN 166
           SGSGSGSGYGAGSGRGS    GEGYGEGHGYGEGHGYG  NGGEN
Sbjct: 121 SGSGSGSGYGAGSGRGS----GEGYGEGHGYGEGHGYG--NGGEN 151

BLAST of Lcy03g018730.1 vs. NCBI nr
Match: XP_022921884.1 (glycine-rich cell wall structural protein 2-like [Cucurbita moschata] >KAG6589744.1 hypothetical protein SDJN03_15167, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 155.6 bits (392), Expect = 3.7e-34
Identity = 134/166 (80.72%), Postives = 141/166 (84.94%), Query Frame = 0

Query: 1   MASIRAVTIVALVLGVSFIVSESRVARKDLGLDLGGVGLGVGTGVGLGLGGGSGSGSGSG 60
           MASIRAV+I+AL+L +S IVSESRVAR DLGLDLGGVG+G+GTGVGLGLG       GSG
Sbjct: 1   MASIRAVSILALLLALSVIVSESRVARMDLGLDLGGVGVGIGTGVGLGLG-------GSG 60

Query: 61  SGSGSGSGSGSGSGSSSASSSHSSSSSSGSDAGSEAGSYAGSHAGSRAGSGSGRNRNNG- 120
           SGSGSGSGSGSGSGSSSASSSHSSSSSSGSDAGSEAGSYAGS+    AGSGSGRNRN G 
Sbjct: 61  SGSGSGSGSGSGSGSSSASSSHSSSSSSGSDAGSEAGSYAGSY----AGSGSGRNRNGGS 120

Query: 121 GSGSGSGSGYGAGSGRGSGSGGGEGYGEGHGYGEGHGYGNDNGGEN 166
           GSGSGSGSGYGAGSGRGSGSGGGEGYGEGHGYG        N GEN
Sbjct: 121 GSGSGSGSGYGAGSGRGSGSGGGEGYGEGHGYG--------NDGEN 147

BLAST of Lcy03g018730.1 vs. NCBI nr
Match: XP_023515818.1 (putative glycine-rich cell wall structural protein 1 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 147.9 bits (372), Expect = 7.7e-32
Identity = 126/181 (69.61%), Postives = 135/181 (74.59%), Query Frame = 0

Query: 1   MASIRAVTIVALVLGVSFIVSESRVARKDLGLDLGGVGLGVGTGVGLGLGGGSGSGSGSG 60
           MASIRAV+I+AL+L +S IVSESR+AR DLGLDLGGVG+G+GTGVGLGLG          
Sbjct: 1   MASIRAVSILALLLALSVIVSESRIARMDLGLDLGGVGVGIGTGVGLGLG---------- 60

Query: 61  SGSGSGSGSGSGSGSSSASSSHSSSSSSGSDAGSEAGSYAGSHAGSRAGSG--------- 120
                GSGSGSGSGSSSASSSHSSSSSSGSDAGSEAGSYAGS+AGSRAGSG         
Sbjct: 61  -----GSGSGSGSGSSSASSSHSSSSSSGSDAGSEAGSYAGSYAGSRAGSGSGSGAGSEA 120

Query: 121 -----------SGRNRNNGGSGSGSGSGYGAGSGRGSGSGGGEGYGEGHGYGEGHGYGND 162
                      SGRNRN    GSGSGSGYG GSGRGSG+GGGEGYGEGHGYGEG GYG  
Sbjct: 121 GSYAGSRAGSASGRNRN---GGSGSGSGYGGGSGRGSGNGGGEGYGEGHGYGEGRGYGGG 163

BLAST of Lcy03g018730.1 vs. NCBI nr
Match: XP_008443812.1 (PREDICTED: putative glycine-rich cell wall structural protein 1 [Cucumis melo])

HSP 1 Score: 144.8 bits (364), Expect = 6.5e-31
Identity = 124/165 (75.15%), Postives = 129/165 (78.18%), Query Frame = 0

Query: 1   MASIRAVTIVALVLGVSFIVSESRVARKDLGLDLGGVGLGVGTGVGLGLGGGSGSGSGSG 60
           MASIR V +V  +LGVS IVSESRVARKDLGLDLGG+GLGVGTGVGLGL           
Sbjct: 1   MASIRGVAVVTFLLGVSVIVSESRVARKDLGLDLGGMGLGVGTGVGLGL----------- 60

Query: 61  SGSGSGSGSGSGSGSSSASSSHSSSSSSGSDAGSEAGSYAGSHAGSRAGSGSGRNRNNGG 120
              GSGSG GSG GSSSASSSHSSSSSSGSDAGSEAGSYAGS+AGSRAGSGSGRNR NGG
Sbjct: 61  --DGSGSGFGSGPGSSSASSSHSSSSSSGSDAGSEAGSYAGSYAGSRAGSGSGRNR-NGG 120

Query: 121 SGSGSGSGYGAGSGRGSGSGGGEGYGEGHGYGEGHGYGNDNGGEN 166
           SGSGSG+G            GGEGYGEGHGYGEGHGYG  NGGEN
Sbjct: 121 SGSGSGTG-----------NGGEGYGEGHGYGEGHGYG--NGGEN 138

BLAST of Lcy03g018730.1 vs. NCBI nr
Match: XP_023515819.1 (putative glycine-rich cell wall structural protein 1 isoform X3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 140.6 bits (353), Expect = 1.2e-29
Identity = 120/161 (74.53%), Postives = 133/161 (82.61%), Query Frame = 0

Query: 1   MASIRAVTIVALVLGVSFIVSESRVARKDLGLDLGGVGLGVGTGVGLGLGGGSGSGSGSG 60
           MASI ++ +V  +L  S IVS++RVARKDLGLDLGG+G+G+GTG+GLGLG     GSGSG
Sbjct: 1   MASINSLIVVCFLLSFSAIVSQARVARKDLGLDLGGLGVGIGTGIGLGLG-----GSGSG 60

Query: 61  SGSGSGSGSGSGSGSSSASSSHSSSSSSGSDAGSEAGSYAGSHAGSRAGSGSGRNRNNGG 120
           SGSGSGSGSGSGS SSS+SSS+SSSS SGS AGSEAGSY    AGSRAGS SGRNRN   
Sbjct: 61  SGSGSGSGSGSGSSSSSSSSSYSSSSGSGSGAGSEAGSY----AGSRAGSASGRNRN--- 120

Query: 121 SGSGSGSGYGAGSGRGSGSGGGEGYGEGHGYGEGHGYGNDN 162
            GSGSGSGYG GSGRGSG+GGGEGYGEGHGYGEG GYG  N
Sbjct: 121 GGSGSGSGYGGGSGRGSGNGGGEGYGEGHGYGEGRGYGGGN 149

BLAST of Lcy03g018730.1 vs. TAIR 10
Match: AT4G30460.1 (glycine-rich protein )

HSP 1 Score: 102.8 bits (255), Expect = 2.6e-22
Identity = 103/158 (65.19%), Postives = 120/158 (75.95%), Query Frame = 0

Query: 6   AVTIVALVLGVSFIVSESRVARKDLGLDLGGVGLGVGTGVGLGLGGGSGSGSGSGSGSGS 65
           ++ ++ L+L  S +VSESRVARKDLGLDLGG+G G+G G+G+G GGGSGSG+G+GSGSG 
Sbjct: 9   SLILITLILATSVLVSESRVARKDLGLDLGGIGAGIGIGIGIG-GGGSGSGAGAGSGSG- 68

Query: 66  GSGSGSGSGSSSASSSHSSSSSSGSDAGSEAGSYAGSHAGSRAG--SGSGRNRNNGGSGS 125
             G GS S SSS+SSS SSS   G DAGSEAGSYAGSHAGS +G  SGSGR R +GG G 
Sbjct: 69  --GGGSSSSSSSSSSSSSSSGGGGGDAGSEAGSYAGSHAGSGSGGRSGSGRGRGSGGGGG 128

Query: 126 -GSGSGYGAGSGRGSGSGGGEGYGEGHGYGEGHGYGND 161
            G G G G G G G GSG GEGYGEG GYG G+G G+D
Sbjct: 129 HGGGGGGGGGRGGGGGSGNGEGYGEGGGYGGGYGGGDD 162

BLAST of Lcy03g018730.1 vs. TAIR 10
Match: AT4G30450.1 (glycine-rich protein )

HSP 1 Score: 72.0 bits (175), Expect = 5.0e-13
Identity = 72/114 (63.16%), Postives = 89/114 (78.07%), Query Frame = 0

Query: 1   MASIRAVTIVALVLGVSFI-VSESRVARKDLGLDLGGVGLGVGTGVGLGLGGGSGSGSGS 60
           MA    + ++ LV+  S + ++ESR+ARKDLG+DLGG+G+G+G G+G+GLGG      GS
Sbjct: 1   MAKAEGLFLLGLVVISSLVMLTESRLARKDLGIDLGGIGIGLGVGLGIGLGG------GS 60

Query: 61  GSGSGSGSGSGSGSGSSSASSSHSSSSSSGSDAGSEAGSYAGSHAGSRAGSGSG 114
           GSG+G+GSGSGSGS SSS+SSS SSSSSSGS  G  AGS AGS AGSRAGSGSG
Sbjct: 61  GSGAGAGSGSGSGSRSSSSSSSSSSSSSSGS--GGSAGSSAGSFAGSRAGSGSG 106

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1E1T01.8e-3480.72glycine-rich cell wall structural protein 2-like OS=Cucurbita moschata OX=3662 G... [more]
A0A1S3B8Y83.2e-3175.15putative glycine-rich cell wall structural protein 1 OS=Cucumis melo OX=3656 GN=... [more]
A0A6J1E5211.3e-2973.91putative glycine-rich cell wall structural protein 1 isoform X3 OS=Cucurbita mos... [more]
A0A6J1E2L11.7e-2968.93cell wall protein IFF6-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC11143... [more]
A0A1S3B9N03.0e-2972.22glycine-rich cell wall structural protein 2-like OS=Cucumis melo OX=3656 GN=LOC1... [more]
Match NameE-valueIdentityDescription
XP_038879815.17.7e-4086.67putative per-hexamer repeat protein 5 [Benincasa hispida][more]
XP_022921884.13.7e-3480.72glycine-rich cell wall structural protein 2-like [Cucurbita moschata] >KAG658974... [more]
XP_023515818.17.7e-3269.61putative glycine-rich cell wall structural protein 1 isoform X2 [Cucurbita pepo ... [more]
XP_008443812.16.5e-3175.15PREDICTED: putative glycine-rich cell wall structural protein 1 [Cucumis melo][more]
XP_023515819.11.2e-2974.53putative glycine-rich cell wall structural protein 1 isoform X3 [Cucurbita pepo ... [more]
Match NameE-valueIdentityDescription
AT4G30460.12.6e-2265.19glycine-rich protein [more]
AT4G30450.15.0e-1363.16glycine-rich protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 108..132
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 54..95
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 51..165
NoneNo IPR availablePANTHERPTHR38934:SF13GLYCINE-RICH CELL WALL STRUCTURAL PROTEIN 1-RELATEDcoord: 1..161
NoneNo IPR availablePANTHERPTHR38934HYPHALLY REGULATED CELL WALL PROTEIN 1coord: 1..161

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Lcy03g018730Lcy03g018730gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Lcy03g018730.1.utr5p1Lcy03g018730.1.utr5p1five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Lcy03g018730.1.exon1Lcy03g018730.1.exon1exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Lcy03g018730.1.cds1Lcy03g018730.1.cds1CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Lcy03g018730.1.utr3p1Lcy03g018730.1.utr3p1three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Lcy03g018730.1Lcy03g018730.1-proteinpolypeptide


GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane