Lcy03g018730 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy03g018730
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	glycine-rich cell wall structural protein 2-like
Location	Chr03: 52431545 .. 52432574 (+)
RNA-Seq Expression	Lcy03g018730
Synteny	Lcy03g018730

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAAACCCAGCACTTGAACTCCACTACTGGAAGTGGGGGTGGGGGTGGACAGACTCTAAACACTTGGCGAAATCCTCGCGAAGTTCCAGAAACCACCAAAACTGGTTTAACAATACAACATTTCTACGCTACTGATCACTTTTCCTGCACCTTCAACTACTATAAATACCCCATCTCCGTTTTGCTTTGGCCATGCAACAACAAACCATTTTCTCAAATTCTCGCTTCCTGTCCTTCCCTTAAACCCTTCTCATTCAACCTTTAATAAAACTACACCACAAAATCAAATGGCTTCCATCAGGGCTGTTACCATTGTTGCCTTGGTACTTGGCGTGTCTTTCATTGTATCAGAAAGCCGCGTCGCCAGGAAGGACTTGGGCCTCGACCTTGGCGGAGTCGGCCTCGGTGTTGGCACGGGAGTGGGCTTGGGATTAGGCGGTGGTAGTGGTAGTGGCAGTGGCAGTGGCTCGGGTTCCGGATCCGGGTCTGGCTCCGGTTCCGGATCTGGGTCCAGTTCTGCTTCCTCATCACACTCCTCAAGCTCCAGCTCTGGCTCCGACGCTGGATCCGAAGCCGGTTCGTACGCTGGTTCTCATGCGGGGTCTCGGGCTGGATCAGGGTCGGGTAGAAACAGGAACAATGGTGGATCCGGATCCGGGTCGGGTTCAGGATATGGTGCTGGTTCAGGCAGGGGAAGCGGCTCGGGCGGCGGTGAAGGATATGGTGAGGGCCATGGCTACGGCGAGGGGCATGGCTATGGCAATGACAATGGCGGCGAAAACTGAGATCAAAACTGATGATTATAATGGAATTAATTAAGGATGATCATCGTCTTTTTTTTTTTTTGGTACATAGATGAATAAAGGCTTTACAGGTGATGAATCCTGATTATTCCTGCTTTATTCTAGTTTCAATCATGTCAGCTGTATGTGTAATGAATTAGGGAATGTAATGCCATATGTAAATATTGAATAAATGTTTTTTTTTTTTTTTGAAATCTAAATATTGAATAAATGTTGCTATTTACTAT

mRNA sequence

GAAAACCCAGCACTTGAACTCCACTACTGGAAGTGGGGGTGGGGGTGGACAGACTCTAAACACTTGGCGAAATCCTCGCGAAGTTCCAGAAACCACCAAAACTGGTTTAACAATACAACATTTCTACGCTACTGATCACTTTTCCTGCACCTTCAACTACTATAAATACCCCATCTCCGTTTTGCTTTGGCCATGCAACAACAAACCATTTTCTCAAATTCTCGCTTCCTGTCCTTCCCTTAAACCCTTCTCATTCAACCTTTAATAAAACTACACCACAAAATCAAATGGCTTCCATCAGGGCTGTTACCATTGTTGCCTTGGTACTTGGCGTGTCTTTCATTGTATCAGAAAGCCGCGTCGCCAGGAAGGACTTGGGCCTCGACCTTGGCGGAGTCGGCCTCGGTGTTGGCACGGGAGTGGGCTTGGGATTAGGCGGTGGTAGTGGTAGTGGCAGTGGCAGTGGCTCGGGTTCCGGATCCGGGTCTGGCTCCGGTTCCGGATCTGGGTCCAGTTCTGCTTCCTCATCACACTCCTCAAGCTCCAGCTCTGGCTCCGACGCTGGATCCGAAGCCGGTTCGTACGCTGGTTCTCATGCGGGGTCTCGGGCTGGATCAGGGTCGGGTAGAAACAGGAACAATGGTGGATCCGGATCCGGGTCGGGTTCAGGATATGGTGCTGGTTCAGGCAGGGGAAGCGGCTCGGGCGGCGGTGAAGGATATGGTGAGGGCCATGGCTACGGCGAGGGGCATGGCTATGGCAATGACAATGGCGGCGAAAACTGAGATCAAAACTGATGATTATAATGGAATTAATTAAGGATGATCATCGTCTTTTTTTTTTTTTGGTACATAGATGAATAAAGGCTTTACAGGTGATGAATCCTGATTATTCCTGCTTTATTCTAGTTTCAATCATGTCAGCTGTATGTGTAATGAATTAGGGAATGTAATGCCATATGTAAATATTGAATAAATGTTTTTTTTTTTTTTTGAAATCTAAATATTGAATAAATGTTGCTATTTACTAT

Coding sequence (CDS)

ATGGCTTCCATCAGGGCTGTTACCATTGTTGCCTTGGTACTTGGCGTGTCTTTCATTGTATCAGAAAGCCGCGTCGCCAGGAAGGACTTGGGCCTCGACCTTGGCGGAGTCGGCCTCGGTGTTGGCACGGGAGTGGGCTTGGGATTAGGCGGTGGTAGTGGTAGTGGCAGTGGCAGTGGCTCGGGTTCCGGATCCGGGTCTGGCTCCGGTTCCGGATCTGGGTCCAGTTCTGCTTCCTCATCACACTCCTCAAGCTCCAGCTCTGGCTCCGACGCTGGATCCGAAGCCGGTTCGTACGCTGGTTCTCATGCGGGGTCTCGGGCTGGATCAGGGTCGGGTAGAAACAGGAACAATGGTGGATCCGGATCCGGGTCGGGTTCAGGATATGGTGCTGGTTCAGGCAGGGGAAGCGGCTCGGGCGGCGGTGAAGGATATGGTGAGGGCCATGGCTACGGCGAGGGGCATGGCTATGGCAATGACAATGGCGGCGAAAACTGA

Protein sequence

MASIRAVTIVALVLGVSFIVSESRVARKDLGLDLGGVGLGVGTGVGLGLGGGSGSGSGSGSGSGSGSGSGSGSGSSSASSSHSSSSSSGSDAGSEAGSYAGSHAGSRAGSGSGRNRNNGGSGSGSGSGYGAGSGRGSGSGGGEGYGEGHGYGEGHGYGNDNGGEN

Homology

[Close]

BLAST of Lcy03g018730 vs. ExPASy TrEMBL
Match: A0A6J1E1T0 (glycine-rich cell wall structural protein 2-like OS=Cucurbita moschata OX=3662 GN=LOC111430015 PE=4 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 1.8e-34
Identity = 134/166 (80.72%), Postives = 141/166 (84.94%), Query Frame = 0


Query: 1   MASIRAVTIVALVLGVSFIVSESRVARKDLGLDLGGVGLGVGTGVGLGLGGGSGSGSGSG 60
           MASIRAV+I+AL+L +S IVSESRVAR DLGLDLGGVG+G+GTGVGLGLG       GSG
Sbjct: 1   MASIRAVSILALLLALSVIVSESRVARMDLGLDLGGVGVGIGTGVGLGLG-------GSG 60

Query: 61  SGSGSGSGSGSGSGSSSASSSHSSSSSSGSDAGSEAGSYAGSHAGSRAGSGSGRNRNNG- 120
           SGSGSGSGSGSGSGSSSASSSHSSSSSSGSDAGSEAGSYAGS+    AGSGSGRNRN G 
Sbjct: 61  SGSGSGSGSGSGSGSSSASSSHSSSSSSGSDAGSEAGSYAGSY----AGSGSGRNRNGGS 120

Query: 121 GSGSGSGSGYGAGSGRGSGSGGGEGYGEGHGYGEGHGYGNDNGGEN 166
           GSGSGSGSGYGAGSGRGSGSGGGEGYGEGHGYG        N GEN
Sbjct: 121 GSGSGSGSGYGAGSGRGSGSGGGEGYGEGHGYG--------NDGEN 147

[Close]

BLAST of Lcy03g018730 vs. ExPASy TrEMBL
Match: A0A1S3B8Y8 (putative glycine-rich cell wall structural protein 1 OS=Cucumis melo OX=3656 GN=LOC103487315 PE=4 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 3.2e-31
Identity = 124/165 (75.15%), Postives = 129/165 (78.18%), Query Frame = 0


Query: 1   MASIRAVTIVALVLGVSFIVSESRVARKDLGLDLGGVGLGVGTGVGLGLGGGSGSGSGSG 60
           MASIR V +V  +LGVS IVSESRVARKDLGLDLGG+GLGVGTGVGLGL           
Sbjct: 1   MASIRGVAVVTFLLGVSVIVSESRVARKDLGLDLGGMGLGVGTGVGLGL----------- 60

Query: 61  SGSGSGSGSGSGSGSSSASSSHSSSSSSGSDAGSEAGSYAGSHAGSRAGSGSGRNRNNGG 120
              GSGSG GSG GSSSASSSHSSSSSSGSDAGSEAGSYAGS+AGSRAGSGSGRNR NGG
Sbjct: 61  --DGSGSGFGSGPGSSSASSSHSSSSSSGSDAGSEAGSYAGSYAGSRAGSGSGRNR-NGG 120

Query: 121 SGSGSGSGYGAGSGRGSGSGGGEGYGEGHGYGEGHGYGNDNGGEN 166
           SGSGSG+G            GGEGYGEGHGYGEGHGYG  NGGEN
Sbjct: 121 SGSGSGTG-----------NGGEGYGEGHGYGEGHGYG--NGGEN 138

[Close]

BLAST of Lcy03g018730 vs. ExPASy TrEMBL
Match: A0A6J1E521 (putative glycine-rich cell wall structural protein 1 isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111430014 PE=4 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 1.3e-29
Identity = 119/161 (73.91%), Postives = 133/161 (82.61%), Query Frame = 0


Query: 1   MASIRAVTIVALVLGVSFIVSESRVARKDLGLDLGGVGLGVGTGVGLGLGGGSGSGSGSG 60
           MASI ++ +V  +L  S I+S++RVARKDLGLDLGG+G+G+GTG+GLGLG     GSGSG
Sbjct: 1   MASINSLIVVCFLLSFSVILSQARVARKDLGLDLGGLGVGIGTGIGLGLG-----GSGSG 60

Query: 61  SGSGSGSGSGSGSGSSSASSSHSSSSSSGSDAGSEAGSYAGSHAGSRAGSGSGRNRNNGG 120
           SGSGSGSGSGSGS SSS+SSS+SSSS SGS AGSEAGSY    AGSRAGSGSG NRN   
Sbjct: 61  SGSGSGSGSGSGSSSSSSSSSYSSSSGSGSGAGSEAGSY----AGSRAGSGSGPNRN--- 120

Query: 121 SGSGSGSGYGAGSGRGSGSGGGEGYGEGHGYGEGHGYGNDN 162
            GSGSGSGYG GSGRGSG+GGGEGYGEGHGYGEG GYG  N
Sbjct: 121 GGSGSGSGYGGGSGRGSGNGGGEGYGEGHGYGEGRGYGGGN 149

[Close]

BLAST of Lcy03g018730 vs. ExPASy TrEMBL
Match: A0A6J1E2L1 (cell wall protein IFF6-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111430014 PE=4 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 1.7e-29
Identity = 122/177 (68.93%), Postives = 137/177 (77.40%), Query Frame = 0


Query: 1   MASIRAVTIVALVLGVSFIVSESRVARKDLGLDLGGVGLGVGTGVGLGLGGGSGSGSGSG 60
           MASI ++ +V  +L  S I+S++RVARKDLGLDLGG+G+G+GTG+GLGLG     GSGSG
Sbjct: 1   MASINSLIVVCFLLSFSVILSQARVARKDLGLDLGGLGVGIGTGIGLGLG-----GSGSG 60

Query: 61  SGSGSGSGSGSGSGSSSASSSHSSSSSSGSDAGSEAGSY----------------AGSHA 120
           SGSGSGSGSGSGS SSS+SSS+SSSS SGS AGSEAGSY                AGS+A
Sbjct: 61  SGSGSGSGSGSGSSSSSSSSSYSSSSGSGSGAGSEAGSYAGSRAGSGSGSGAGSEAGSYA 120

Query: 121 GSRAGSGSGRNRNNGGSGSGSGSGYGAGSGRGSGSGGGEGYGEGHGYGEGHGYGNDN 162
           GSRAGSGSG NRN    GSGSGSGYG GSGRGSG+GGGEGYGEGHGYGEG GYG  N
Sbjct: 121 GSRAGSGSGPNRN---GGSGSGSGYGGGSGRGSGNGGGEGYGEGHGYGEGRGYGGGN 169

[Close]

BLAST of Lcy03g018730 vs. ExPASy TrEMBL
Match: A0A1S3B9N0 (glycine-rich cell wall structural protein 2-like OS=Cucumis melo OX=3656 GN=LOC103487316 PE=4 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 3.0e-29
Identity = 117/162 (72.22%), Postives = 133/162 (82.10%), Query Frame = 0


Query: 1   MASIRAVT-IVALVLGVSFIVSESRVARKDLGLDLGGVGLGVGTGVGLGLGGGSGSGSGS 60
           MASI+++  +V L+L  S  +SE RVARKDLG+DLGG+G+G+G G+GLG+G       GS
Sbjct: 1   MASIKSLALVVCLLLSFSVFLSEGRVARKDLGIDLGGLGVGLGAGIGLGIG-------GS 60

Query: 61  GSGSGSGSGSGSGSGSSSASSSHSSSSSSGSDAGSEAGSYAGSHAGSRAGSGSGRNRNNG 120
           GSGSGSGSGSGSGSGSSS+SSS+SSSSSSGS AGSEAGSYAGS+AGSRAGSGSG NRN  
Sbjct: 61  GSGSGSGSGSGSGSGSSSSSSSYSSSSSSGSGAGSEAGSYAGSYAGSRAGSGSGGNRN-- 120

Query: 121 GSGSGSGSGYGAGSGRGSGSGGGEGYGEGHGYGEGHGYGNDN 162
             GSG GSGYG GSGRG  +G GEGYGEGHGYGEGHGYG  N
Sbjct: 121 -GGSGYGSGYGGGSGRGGSNGNGEGYGEGHGYGEGHGYGGGN 152

[Close]

BLAST of Lcy03g018730 vs. NCBI nr
Match: XP_038879815.1 (putative per-hexamer repeat protein 5 [Benincasa hispida])

HSP 1 Score: 174.5 bits (441), Expect = 7.7e-40
Identity = 143/165 (86.67%), Postives = 147/165 (89.09%), Query Frame = 0


Query: 1   MASIRAVTIVALVLGVSFIVSESRVARKDLGLDLGGVGLGVGTGVGLGLGGGSGSGSGSG 60
           MASIRAVTI+A +LGVS IVSE RVAR +LGLDLGGVGLGVGTGVGLGLG       GSG
Sbjct: 1   MASIRAVTILAFLLGVSVIVSEGRVARMNLGLDLGGVGLGVGTGVGLGLG-------GSG 60

Query: 61  SGSGSGSGSGSGSGSSSASSSHSSSSSSGSDAGSEAGSYAGSHAGSRAGSGSGRNRNNGG 120
           SGSGSGSGSGSGSGSSSASSSHSSSSSSGSDAGSEAGSYAGS+AGSRAGSGSGRNR NGG
Sbjct: 61  SGSGSGSGSGSGSGSSSASSSHSSSSSSGSDAGSEAGSYAGSYAGSRAGSGSGRNR-NGG 120

Query: 121 SGSGSGSGYGAGSGRGSGSGGGEGYGEGHGYGEGHGYGNDNGGEN 166
           SGSGSGSGYGAGSGRGS    GEGYGEGHGYGEGHGYG  NGGEN
Sbjct: 121 SGSGSGSGYGAGSGRGS----GEGYGEGHGYGEGHGYG--NGGEN 151

[Close]

BLAST of Lcy03g018730 vs. NCBI nr
Match: XP_022921884.1 (glycine-rich cell wall structural protein 2-like [Cucurbita moschata] >KAG6589744.1 hypothetical protein SDJN03_15167, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 155.6 bits (392), Expect = 3.7e-34
Identity = 134/166 (80.72%), Postives = 141/166 (84.94%), Query Frame = 0


Query: 1   MASIRAVTIVALVLGVSFIVSESRVARKDLGLDLGGVGLGVGTGVGLGLGGGSGSGSGSG 60
           MASIRAV+I+AL+L +S IVSESRVAR DLGLDLGGVG+G+GTGVGLGLG       GSG
Sbjct: 1   MASIRAVSILALLLALSVIVSESRVARMDLGLDLGGVGVGIGTGVGLGLG-------GSG 60

Query: 61  SGSGSGSGSGSGSGSSSASSSHSSSSSSGSDAGSEAGSYAGSHAGSRAGSGSGRNRNNG- 120
           SGSGSGSGSGSGSGSSSASSSHSSSSSSGSDAGSEAGSYAGS+    AGSGSGRNRN G 
Sbjct: 61  SGSGSGSGSGSGSGSSSASSSHSSSSSSGSDAGSEAGSYAGSY----AGSGSGRNRNGGS 120

Query: 121 GSGSGSGSGYGAGSGRGSGSGGGEGYGEGHGYGEGHGYGNDNGGEN 166
           GSGSGSGSGYGAGSGRGSGSGGGEGYGEGHGYG        N GEN
Sbjct: 121 GSGSGSGSGYGAGSGRGSGSGGGEGYGEGHGYG--------NDGEN 147

[Close]

BLAST of Lcy03g018730 vs. NCBI nr
Match: XP_023515818.1 (putative glycine-rich cell wall structural protein 1 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 147.9 bits (372), Expect = 7.7e-32
Identity = 126/181 (69.61%), Postives = 135/181 (74.59%), Query Frame = 0


Query: 1   MASIRAVTIVALVLGVSFIVSESRVARKDLGLDLGGVGLGVGTGVGLGLGGGSGSGSGSG 60
           MASIRAV+I+AL+L +S IVSESR+AR DLGLDLGGVG+G+GTGVGLGLG          
Sbjct: 1   MASIRAVSILALLLALSVIVSESRIARMDLGLDLGGVGVGIGTGVGLGLG---------- 60

Query: 61  SGSGSGSGSGSGSGSSSASSSHSSSSSSGSDAGSEAGSYAGSHAGSRAGSG--------- 120
                GSGSGSGSGSSSASSSHSSSSSSGSDAGSEAGSYAGS+AGSRAGSG         
Sbjct: 61  -----GSGSGSGSGSSSASSSHSSSSSSGSDAGSEAGSYAGSYAGSRAGSGSGSGAGSEA 120

Query: 121 -----------SGRNRNNGGSGSGSGSGYGAGSGRGSGSGGGEGYGEGHGYGEGHGYGND 162
                      SGRNRN    GSGSGSGYG GSGRGSG+GGGEGYGEGHGYGEG GYG  
Sbjct: 121 GSYAGSRAGSASGRNRN---GGSGSGSGYGGGSGRGSGNGGGEGYGEGHGYGEGRGYGGG 163

[Close]

BLAST of Lcy03g018730 vs. NCBI nr
Match: XP_008443812.1 (PREDICTED: putative glycine-rich cell wall structural protein 1 [Cucumis melo])

HSP 1 Score: 144.8 bits (364), Expect = 6.5e-31
Identity = 124/165 (75.15%), Postives = 129/165 (78.18%), Query Frame = 0


Query: 1   MASIRAVTIVALVLGVSFIVSESRVARKDLGLDLGGVGLGVGTGVGLGLGGGSGSGSGSG 60
           MASIR V +V  +LGVS IVSESRVARKDLGLDLGG+GLGVGTGVGLGL           
Sbjct: 1   MASIRGVAVVTFLLGVSVIVSESRVARKDLGLDLGGMGLGVGTGVGLGL----------- 60

Query: 61  SGSGSGSGSGSGSGSSSASSSHSSSSSSGSDAGSEAGSYAGSHAGSRAGSGSGRNRNNGG 120
              GSGSG GSG GSSSASSSHSSSSSSGSDAGSEAGSYAGS+AGSRAGSGSGRNR NGG
Sbjct: 61  --DGSGSGFGSGPGSSSASSSHSSSSSSGSDAGSEAGSYAGSYAGSRAGSGSGRNR-NGG 120

Query: 121 SGSGSGSGYGAGSGRGSGSGGGEGYGEGHGYGEGHGYGNDNGGEN 166
           SGSGSG+G            GGEGYGEGHGYGEGHGYG  NGGEN
Sbjct: 121 SGSGSGTG-----------NGGEGYGEGHGYGEGHGYG--NGGEN 138

[Close]

BLAST of Lcy03g018730 vs. NCBI nr
Match: XP_023515819.1 (putative glycine-rich cell wall structural protein 1 isoform X3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 140.6 bits (353), Expect = 1.2e-29
Identity = 120/161 (74.53%), Postives = 133/161 (82.61%), Query Frame = 0


Query: 1   MASIRAVTIVALVLGVSFIVSESRVARKDLGLDLGGVGLGVGTGVGLGLGGGSGSGSGSG 60
           MASI ++ +V  +L  S IVS++RVARKDLGLDLGG+G+G+GTG+GLGLG     GSGSG
Sbjct: 1   MASINSLIVVCFLLSFSAIVSQARVARKDLGLDLGGLGVGIGTGIGLGLG-----GSGSG 60

Query: 61  SGSGSGSGSGSGSGSSSASSSHSSSSSSGSDAGSEAGSYAGSHAGSRAGSGSGRNRNNGG 120
           SGSGSGSGSGSGS SSS+SSS+SSSS SGS AGSEAGSY    AGSRAGS SGRNRN   
Sbjct: 61  SGSGSGSGSGSGSSSSSSSSSYSSSSGSGSGAGSEAGSY----AGSRAGSASGRNRN--- 120

Query: 121 SGSGSGSGYGAGSGRGSGSGGGEGYGEGHGYGEGHGYGNDN 162
            GSGSGSGYG GSGRGSG+GGGEGYGEGHGYGEG GYG  N
Sbjct: 121 GGSGSGSGYGGGSGRGSGNGGGEGYGEGHGYGEGRGYGGGN 149

[Close]

BLAST of Lcy03g018730 vs. TAIR 10
Match: AT4G30460.1 (glycine-rich protein )

HSP 1 Score: 102.8 bits (255), Expect = 2.6e-22
Identity = 103/158 (65.19%), Postives = 120/158 (75.95%), Query Frame = 0


Query: 6   AVTIVALVLGVSFIVSESRVARKDLGLDLGGVGLGVGTGVGLGLGGGSGSGSGSGSGSGS 65
           ++ ++ L+L  S +VSESRVARKDLGLDLGG+G G+G G+G+G GGGSGSG+G+GSGSG 
Sbjct: 9   SLILITLILATSVLVSESRVARKDLGLDLGGIGAGIGIGIGIG-GGGSGSGAGAGSGSG- 68

Query: 66  GSGSGSGSGSSSASSSHSSSSSSGSDAGSEAGSYAGSHAGSRAG--SGSGRNRNNGGSGS 125
             G GS S SSS+SSS SSS   G DAGSEAGSYAGSHAGS +G  SGSGR R +GG G 
Sbjct: 69  --GGGSSSSSSSSSSSSSSSGGGGGDAGSEAGSYAGSHAGSGSGGRSGSGRGRGSGGGGG 128

Query: 126 -GSGSGYGAGSGRGSGSGGGEGYGEGHGYGEGHGYGND 161
            G G G G G G G GSG GEGYGEG GYG G+G G+D
Sbjct: 129 HGGGGGGGGGRGGGGGSGNGEGYGEGGGYGGGYGGGDD 162

[Close]

BLAST of Lcy03g018730 vs. TAIR 10
Match: AT4G30450.1 (glycine-rich protein )

HSP 1 Score: 72.0 bits (175), Expect = 5.0e-13
Identity = 72/114 (63.16%), Postives = 89/114 (78.07%), Query Frame = 0


Query: 1   MASIRAVTIVALVLGVSFI-VSESRVARKDLGLDLGGVGLGVGTGVGLGLGGGSGSGSGS 60
           MA    + ++ LV+  S + ++ESR+ARKDLG+DLGG+G+G+G G+G+GLGG      GS
Sbjct: 1   MAKAEGLFLLGLVVISSLVMLTESRLARKDLGIDLGGIGIGLGVGLGIGLGG------GS 60

Query: 61  GSGSGSGSGSGSGSGSSSASSSHSSSSSSGSDAGSEAGSYAGSHAGSRAGSGSG 114
           GSG+G+GSGSGSGS SSS+SSS SSSSSSGS  G  AGS AGS AGSRAGSGSG
Sbjct: 61  GSGAGAGSGSGSGSRSSSSSSSSSSSSSSGS--GGSAGSSAGSFAGSRAGSGSG 106

The following BLAST results are available for this feature:

BLAST of Lcy03g018730 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy03g018730 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E1T0	1.8e-34	80.72	glycine-rich cell wall structural protein 2-like OS=Cucurbita moschata OX=3662 G...	[more]
A0A1S3B8Y8	3.2e-31	75.15	putative glycine-rich cell wall structural protein 1 OS=Cucumis melo OX=3656 GN=...	[more]
A0A6J1E521	1.3e-29	73.91	putative glycine-rich cell wall structural protein 1 isoform X3 OS=Cucurbita mos...	[more]
A0A6J1E2L1	1.7e-29	68.93	cell wall protein IFF6-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC11143...	[more]
A0A1S3B9N0	3.0e-29	72.22	glycine-rich cell wall structural protein 2-like OS=Cucumis melo OX=3656 GN=LOC1...	[more]

BLAST of Lcy03g018730 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038879815.1	7.7e-40	86.67	putative per-hexamer repeat protein 5 [Benincasa hispida]	[more]
XP_022921884.1	3.7e-34	80.72	glycine-rich cell wall structural protein 2-like [Cucurbita moschata] >KAG658974...	[more]
XP_023515818.1	7.7e-32	69.61	putative glycine-rich cell wall structural protein 1 isoform X2 [Cucurbita pepo ...	[more]
XP_008443812.1	6.5e-31	75.15	PREDICTED: putative glycine-rich cell wall structural protein 1 [Cucumis melo]	[more]
XP_023515819.1	1.2e-29	74.53	putative glycine-rich cell wall structural protein 1 isoform X3 [Cucurbita pepo ...	[more]

BLAST of Lcy03g018730 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G30460.1	2.6e-22	65.19	glycine-rich protein	[more]
AT4G30450.1	5.0e-13	63.16	glycine-rich protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 108..132
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 54..95
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 51..165
None	No IPR available	PANTHER	PTHR38934:SF13	GLYCINE-RICH CELL WALL STRUCTURAL PROTEIN 1-RELATED	coord: 1..161
None	No IPR available	PANTHER	PTHR38934	HYPHALLY REGULATED CELL WALL PROTEIN 1	coord: 1..161

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy03g018730.1	Lcy03g018730.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane