Lcy02g008630 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy02g008630
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	tRNA pseudouridine synthase
Location	Chr02: 13699054 .. 13704561 (+)
RNA-Seq Expression	Lcy02g008630
Synteny	Lcy02g008630

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGAATTAGGGCTTCATTCCTCGCGTCGCATCTCTTTCCTCACATCTTCCTTCGGTCCTCGCAGTCGCAGTCATCTTCGGTCCTCTTCCTCTCTTTGCACAATCGTGAGTCGCCTCTCCTCTCGTGCTCGTGCTTGTCGTTGTCGTCAGAGCTTGCGTCGAGTTTATTTGCCATCGACGCCGAAGCTTGCTATAGTGTTATTTCTGGGTTTTCGCCGCCGTCGAAGCTGTGCATTTGGTTTAAGTCGCCGTCGCCGTCGTCGCTGGAGCTTGCTATTGGGTAAGTGTTCTGTCTGGGTCTTCTTTTGGTGTTGTTCTTCTGGGGTTGCTTAATTTTGACTTGGGAATATTAGTGCCTTTTTTGGAGTATCTGCCCTGTTTTTGCTTAATTTTCTGCTGAAGCTAGTCGTCTTCTTCTTCTTTTTCATTTTCTGTAATCGAACGACGCCCCTGGACTAGAAAATCCCCGGAAAAGGGCCAATACTAGAGGAAGATCGAGACGATATCACTACGATGTCGGCCAGAGTTGTAAACGAGGCAGCTTCTCCTTAGATGCTTCACAAAAATTTTCTCGATGATAAAAAAACCTAATCAAACAAACAAACCACACCCATATAAGGAAATTCCCAAACCCTAAACACAAAAGAAAGCAAGTCCCATTCCCAAATCCAAAAACATCGAAAACAAGACAGAAAAATCGAAAAAAAAAATATCCACGTGAATCAAAGAATCTCGTAATTCCACCATTACAAAACATGGCTGAATCGAGTAAAAGAAAAACAGAAATCGCAGGGATGGTCTAGGCTTAATTCGGAAACTGAAAAACAAGAAAAGGGATTTTGTGTCAATCAAAATTAATAAAGTGCAGTACCTTTTGGCGATGAGGTCCTCCAGATTTACCTCGATTGAACCACAAATTGAAAAAATCGCTTTTGTTCAAACAGTATCAAACCAAAACACAGTGCTCTCCACTCGTAAATCTAAAACGAAGAGAGAGAAGGGAGAAATGTGTAGGAATTGAGGAAGAGGGATAAGATGATAAAAAAAAAAACAAAAAAAAAACAAAAAAAAAAAAAAAAACAAAACAAAACTGTGGATGACCCGACCTGACTTGGTTCGGGTCAAATCTGAACTGGTTCGAGTCGGTCGTCCGTACAACCGACCTGGTTCGGATCAGGTCGATTTTTCCGTACAACCGATCTTACCCGAAAATTTTACACCCCTACCAAACATAGTCTTAAACTAAAAGGCATTAGAAAAGGTTGTGAGTTCAAATACCATTCACCAAAAATGTATTTTAGCTGCATTTTTTAAATGGATTTTTCTTGTTAGACTATTTAATCTCAAATTCACAACAAAGGAGCTGTGGTTGGAATCTTGAACTGAAACACATACCTAGAAGAAGGATGAGGTGCTGGATAGTGGGTTCGGCGGTTCTTCCTCCAATTCCCCTTCCCCTTTCACCAACCATCCCATCTCCAAATGGCTCTTCATCTTCCACCAATCGTAGATTCCCGGTAATGCCCATTCTTCTCTGATCCTTCCTCTCCTCTACTCGTATTTCTGGTTTAATTTTGATGATGTTTCTGTGGTCGTTGCCTTGCCGCGATTCTTCCAAAGAATGCAGAGGATTCCTGTTATGTCACAGAGCCCCCTTTCCCTAGCTTTAAATGGCGGTTGGTCATTGCTTATGACGGTACGCGATATGCAGGTCCGGCTTTCTTTTTCTTCTCTCCGATTGTTTATTCAGGCGAATGAATTAAACGATTTTGCATCCATATACCAGCTTTATCTTTTTAGGTTAATGGTAATTCTAATCGGCTTAAGCTTTTGAGGTTAGTTGCTGTTGGATGTCTTTTTCATCATCAGTATCATTTCGCCGCAAGATCACCCAAATTTGAGACTCGTATAAAAGTACTTGCCTACTTTTATTTCGTTTTGATCATGATTGTTTTTACTTGTTTTAAGTTATCATAGAGAGACATGATTTGGGTTCCGGTGTGAATTATGAGTTAACTCAGATATTGCATTCCTGCGCTTACTACTACAATTTTGAGGCTCTTTTCGTCTTTCTCCAAAAGTTTGATAAAATAACTTTAAATTTGGTGCTACTAAATTAGGCTGGCAATATCAGCGGTCACCTCCTACCATCCAGTGCCTGATTGAAAATGCCTTGACTCGAGCAACAAAGCTTGAGAGGAAGGATCTCCGTTTAGTTGGTGCAAGCAGAACAGATACGGGAGTTCATGCCTGGGGTCAGGTCTGATGTGCTTTTTGGAGTTGGGTTTAACACATCCTTGGAAAACAATGCTTGCTGTTGCTTACAACAAGTTGAGGTTTCAGGTGGCACACTTTATTACGCCATTTAACTATGATAGCTTGGATAACGTTCATGCTGCTTTGAATGGTCTTCTTCCTGCGGATATAAGAGTTCGGGAGATTAGTCCTGCTGTGCCTGACTTTCATGCTCGGTTTTCTACAATAAGCAAGGTTTATCACTACAAGATATATAATGGCACCATCTTGGATCCATTTCAGCGGTGCTACACTTACCATTGCGTTTATAAACTCAATTATGCAGCCATGAGAGAAGCTGCAAATTATTTCATTGGAAAGCATGATTTTTCTGCTTTTGCAAATGCAGCACATAATGATCGAGTGGTAGATCCAGTGAAGGTCATTTTTCGTTTTGACGTCATAGAAATGGTAAAATTTTAAGGTTCTCTAGTCCAGTGATGTTTTTTCTATAATGTGTCTGTTTCTCATGAGTCTAGCGTGGTTAGTTCTGTATCCAACTCTTTTGGTTATCTGTGTGAATCATTCTATTTTCTGCTTTATTCAAAAACTGAGGTTAAATGCTTAGCATGTGATTCTTTGTTCAGGGACCTCTTGTTCAGCTAGAAGTTGAGGGTTCTGGGTTCTTGTATAGACAAGTTCGGAATATGGTAATTATATTTGTTACACCCATTTTTTTAGTCGATTTCCCTTGTCCGATATTTTACTTAGTAAATGCTGGTCACTATAATAGTCTTATAGTATCTTTCATTTTTTCTCAATGAAAGCATGGTCTTTTATCAAAAAAATAATAGTTTTATAGTAGGCCAATTTGAGCCTAGCTCAACTGGTGAAGATATTCTCGACCAAAAGGTCAGAGATTCGAGTCTTTCTTCCTATGTGTTTTGAACTAAAAAAAAGACTTTAGTAGAAAGTAAACTTCCTGGAAGCGTAGATTTAAGTTTGTAAAATCTGGTTCATGCAACTGTAAGCATTTCTCTGGTACTTTTGCAGGTTGCCTTGTTGATTCAAATCGGAAAGGAAGCAATTGCTCCTGATGTTGTTCCTAAGATATTGGCCTCTGGAGATCGCAAGGAGCTTGCCAAGTATGCTCCGTGCATTCCTCCGCAGGGGCTCTGTCTTATGAGTATTAATTATAAAGAGGACCATCTAAAGCTTCCATCTGGTTGCCCTGGGACTAGTTTTGGTAGGCGTCATAGTGTGAGCAAATGTAAGCTCCCTTTCTATTGAATTAATGACGGATCTGTTCTTATGAGCATAATTTTCATTGCCGGTTCCAACAAATTAGAGGATGAGATATTAGATAATTAGTGTAGTTTAGTTAACATTAGTTTAGCTAACTTTGGATTTAGTTTTTATTGATTTGTGAAGTAGTATTTGTGTGTGATTGTTATTTGTCTTTTTTCTTGTTAGGCCTATTATATTAAGTACAGAAATTATAGCGAGTGGGTTCAATTAACCTATTAATTACATGTTTGTCATAATCTTTTGATTTTCTCATTTGTAGGATTTCATGCATTTATTTCAATTTTTTTCTTCCCTAATTGCCCTTATTTAATTATATAATTATAATAAATATTGTTTTTTTCTTTCAAATTGCAGTCGGGCAGCCAAGATGGAATGTTTTTTTTTAAAATATAATTATATATATTCTCAATTAATTCCTTTTAGGTAACAAATATATATAATTTCAAATGTATTCCCACATCCATTTTGGAATTCCTTTTTATGCAGATTTGGTAGATTTGCCGCATGCTTCTCTATTTTTTTTTTTTTTTTTAAATACGCCTCCTTCAGTAAGGAAGGTAATAACTAAAATTGGTTTCATGTTTATTCTTATAATATTTTTTTATTTTTTAAAATTCGTATATGGAATGTTATTTTTTCCCATTGCCACCTGCATATTTTTTCAAATAAATCTCATTTTTGAATGGTGAAACCCACCTGTTTTTTGAATTATGAAATTCCTTATTTTCCCATTGCCGCCTGCTTATGGATTTGCTAATAAGCAAATTCGATTTCCGGGATTTATTTCCATTTTTATATACATGTTTGTAAGTGGTATATATAAACGATTTATGAAAAAACAAATTTCATATCTGTTTGTAAGTGGTATATATTGGTACAGAATCATCATGTATGTATTAGAATTATGAATAAACGAATTTCATACGTGCTTGTAAGTGGTATATATCGGTACATAATTATCATGTATGTGTTAGAATTATGAATAAACGTTTTTTCATACCCCATATGAAATAACTATGCTAGTTAGCTAAATAAAAATACCACATATGGAATGCCAGTGAGAATTTATCTAAAAAACTAAAATTTGAGGCAGACAAAACTAATTATGGAGAAGTTTCAAAATCCATATCGGGTATTTAAAAATTCATACCCGGTATTAAAAATCGTTTCAAAATTCATACCGGGTATTTAAAAATTCATATCCGGTATTTAGAAATTCATACGGGGTATTTAACAGAGATTTTCTTTTATAGTTTTGTTGTAGGTTTGTGATGAGAGGGCATTTTTGTAAATAACCCAAGTTTAGAGTTAGCCCTAAGCTTTCCTTTTCCTTGTCTTTGAGCCACACGCATAGCAATCCATTCTCATCTCTCTCTGCGTGTTATGTTTCGGCCGACCAGCATCATCTCCTTTCCTCCTCCTCGACGTCGGCGTCAGTCTTTCTCCGGTGAGCGTGCGACTACGGAAACGGGCGGTACAACGTCTAAGACGCGCGCGCGAAGGGTTCTTTCCGGTGAGTTGTGTTTTGGATGGGTTTTCGTTTGGTTTTTGTACTTCTAGCGCTCGATTTCTCTCTTTAACGTCTTTCTCCTCTGTACCCATCATATTTCCGGCGTTCTTCTGCGGTCAATAGCTCTCGTTCGCGTGCCAGCCATGGTTGCAGCGTGGGGGTCAAATGGAAGAAGACAAACATATTTTTAGGGAAGGAAGAAGACGAAAGCAGTGGATTCCTTTTCTGTACTTTCTTTTCTTTTTATTTTTTTTTTTAATATCAGAGGGTTATTTTCGTAAATGGGCCACAATTAAAAAAGATGGGCTGGACTGAAATGAAGTTTATAAACTTTTTGGACAAAAGTGAAAAATATGGGCTGATTTCAGCCCATTCTTGTAAAAACCCCTATTAAGTAGCCATTTTAGTATTGTAATGTAAACTTGGGACATTTTATGGAAATACATGGTATTTT

mRNA sequence

ATGAGAATTAGGGCTTCATTCCTCGCGTCGCATCTCTTTCCTCACATCTTCCTTCGGTCCTCGCAGTCGCAGTCATCTTCGGTCCTCTTCCTCTCTTTGCACAATCGTGAGTCGCCTCTCCTCTCGTGCTCGTGCTTGTCGTTGTCGTCAGAGCTTGCGTCGAGTTTATTTGCCATCGACGCCGAAGCTTGCTATAGTGTTATTTCTGGGTTTTCGCCGCCGTCGAAGCTGTGCATTTGGTTTAAGTCGCCGTCGCCGTCGTCGCTGGAGCTTGCTATTGGGAGCTGTGGTTGGAATCTTGAACTGAAACACATACCTAGAAGAAGGATGAGGTGCTGGATAGTGGGTTCGGCGGTTCTTCCTCCAATTCCCCTTCCCCTTTCACCAACCATCCCATCTCCAAATGGCTCTTCATCTTCCACCAATCGTAGATTCCCGAATGCAGAGGATTCCTGTTATGTCACAGAGCCCCCTTTCCCTAGCTTTAAATGGCGGTTGGTCATTGCTTATGACGGTACGCGATATGCAGGCTGGCAATATCAGCGGTCACCTCCTACCATCCAGTGCCTGATTGAAAATGCCTTGACTCGAGCAACAAAGCTTGAGAGGAAGGATCTCCGTTTAGTTGGTGCAAGCAGAACAGATACGGGAGTTCATGCCTGGGGTCAGGTGGCACACTTTATTACGCCATTTAACTATGATAGCTTGGATAACGTTCATGCTGCTTTGAATGGTCTTCTTCCTGCGGATATAAGAGTTCGGGAGATTAGTCCTGCTGTGCCTGACTTTCATGCTCGGTTTTCTACAATAAGCAAGGTTTATCACTACAAGATATATAATGGCACCATCTTGGATCCATTTCAGCGGTGCTACACTTACCATTGCGTTTATAAACTCAATTATGCAGCCATGAGAGAAGCTGCAAATTATTTCATTGGAAAGCATGATTTTTCTGCTTTTGCAAATGCAGCACATAATGATCGAGTGGTAGATCCAGTGAAGGTCATTTTTCGTTTTGACGTCATAGAAATGGGACCTCTTGTTCAGCTAGAAGTTGAGGGTTCTGGGTTCTTGTATAGACAAGTTCGGAATATGGTTGCCTTGTTGATTCAAATCGGAAAGGAAGCAATTGCTCCTGATGTTGTTCCTAAGATATTGGCCTCTGGAGATCGCAAGGAGCTTGCCAAGTATGCTCCGTGCATTCCTCCGCAGGGGCTCTGTCTTATGAGTATTAATTATAAAGAGGACCATCTAAAGCTTCCATCTGGTTGCCCTGGGACTAGTTTTGGTAGGCGTCATAGTGTGAGCAAATCATCATCTCCTTTCCTCCTCCTCGACGTCGGCGTCAGTCTTTCTCCGGTGAGCGTGCGACTACGGAAACGGGCGGTACAACGTCTAAGACGCGCGCGCGAAGGGTTCTTTCCGCTCTCGTTCGCGTGCCAGCCATGGTTGCAGCGTGGGGGTCAAATGGAAGAAGACAAACATATTTTTAGGGAAGGAAGAAGACGAAAGCAGTGGATTCCTTTTCTGTACTTTCTTTTCTTTTTATTTTTTTTTTTAATATCAGAGGGTTATTTTCGTAAATGGGCCACAATTAAAAAAGATGGGCTGGACTGAAATGAAGTTTATAAACTTTTTGGACAAAAGTGAAAAATATGGGCTGATTTCAGCCCATTCTTGTAAAAACCCCTATTAAGTAGCCATTTTAGTATTGTAATGTAAACTTGGGACATTTTATGGAAATACATGGTATTTT

Coding sequence (CDS)

ATGAGAATTAGGGCTTCATTCCTCGCGTCGCATCTCTTTCCTCACATCTTCCTTCGGTCCTCGCAGTCGCAGTCATCTTCGGTCCTCTTCCTCTCTTTGCACAATCGTGAGTCGCCTCTCCTCTCGTGCTCGTGCTTGTCGTTGTCGTCAGAGCTTGCGTCGAGTTTATTTGCCATCGACGCCGAAGCTTGCTATAGTGTTATTTCTGGGTTTTCGCCGCCGTCGAAGCTGTGCATTTGGTTTAAGTCGCCGTCGCCGTCGTCGCTGGAGCTTGCTATTGGGAGCTGTGGTTGGAATCTTGAACTGAAACACATACCTAGAAGAAGGATGAGGTGCTGGATAGTGGGTTCGGCGGTTCTTCCTCCAATTCCCCTTCCCCTTTCACCAACCATCCCATCTCCAAATGGCTCTTCATCTTCCACCAATCGTAGATTCCCGAATGCAGAGGATTCCTGTTATGTCACAGAGCCCCCTTTCCCTAGCTTTAAATGGCGGTTGGTCATTGCTTATGACGGTACGCGATATGCAGGCTGGCAATATCAGCGGTCACCTCCTACCATCCAGTGCCTGATTGAAAATGCCTTGACTCGAGCAACAAAGCTTGAGAGGAAGGATCTCCGTTTAGTTGGTGCAAGCAGAACAGATACGGGAGTTCATGCCTGGGGTCAGGTGGCACACTTTATTACGCCATTTAACTATGATAGCTTGGATAACGTTCATGCTGCTTTGAATGGTCTTCTTCCTGCGGATATAAGAGTTCGGGAGATTAGTCCTGCTGTGCCTGACTTTCATGCTCGGTTTTCTACAATAAGCAAGGTTTATCACTACAAGATATATAATGGCACCATCTTGGATCCATTTCAGCGGTGCTACACTTACCATTGCGTTTATAAACTCAATTATGCAGCCATGAGAGAAGCTGCAAATTATTTCATTGGAAAGCATGATTTTTCTGCTTTTGCAAATGCAGCACATAATGATCGAGTGGTAGATCCAGTGAAGGTCATTTTTCGTTTTGACGTCATAGAAATGGGACCTCTTGTTCAGCTAGAAGTTGAGGGTTCTGGGTTCTTGTATAGACAAGTTCGGAATATGGTTGCCTTGTTGATTCAAATCGGAAAGGAAGCAATTGCTCCTGATGTTGTTCCTAAGATATTGGCCTCTGGAGATCGCAAGGAGCTTGCCAAGTATGCTCCGTGCATTCCTCCGCAGGGGCTCTGTCTTATGAGTATTAATTATAAAGAGGACCATCTAAAGCTTCCATCTGGTTGCCCTGGGACTAGTTTTGGTAGGCGTCATAGTGTGAGCAAATCATCATCTCCTTTCCTCCTCCTCGACGTCGGCGTCAGTCTTTCTCCGGTGAGCGTGCGACTACGGAAACGGGCGGTACAACGTCTAAGACGCGCGCGCGAAGGGTTCTTTCCGCTCTCGTTCGCGTGCCAGCCATGGTTGCAGCGTGGGGGTCAAATGGAAGAAGACAAACATATTTTTAGGGAAGGAAGAAGACGAAAGCAGTGGATTCCTTTTCTGTACTTTCTTTTCTTTTTATTTTTTTTTTTAATATCAGAGGGTTATTTTCGTAAATGGGCCACAATTAAAAAAGATGGGCTGGACTGA

Protein sequence

MRIRASFLASHLFPHIFLRSSQSQSSSVLFLSLHNRESPLLSCSCLSLSSELASSLFAIDAEACYSVISGFSPPSKLCIWFKSPSPSSLELAIGSCGWNLELKHIPRRRMRCWIVGSAVLPPIPLPLSPTIPSPNGSSSSTNRRFPNAEDSCYVTEPPFPSFKWRLVIAYDGTRYAGWQYQRSPPTIQCLIENALTRATKLERKDLRLVGASRTDTGVHAWGQVAHFITPFNYDSLDNVHAALNGLLPADIRVREISPAVPDFHARFSTISKVYHYKIYNGTILDPFQRCYTYHCVYKLNYAAMREAANYFIGKHDFSAFANAAHNDRVVDPVKVIFRFDVIEMGPLVQLEVEGSGFLYRQVRNMVALLIQIGKEAIAPDVVPKILASGDRKELAKYAPCIPPQGLCLMSINYKEDHLKLPSGCPGTSFGRRHSVSKSSSPFLLLDVGVSLSPVSVRLRKRAVQRLRRAREGFFPLSFACQPWLQRGGQMEEDKHIFREGRRRKQWIPFLYFLFFLFFFLISEGYFRKWATIKKDGLD

Homology

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BLAST of Lcy02g008630 vs. ExPASy Swiss-Prot
Match: Q6MEE7 (tRNA pseudouridine synthase A 1 OS=Protochlamydia amoebophila (strain UWE25) OX=264201 GN=truA1 PE=3 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 1.3e-51
Identity = 104/255 (40.78%), Postives = 162/255 (63.53%), Query Frame = 0


Query: 164 WRLVIAYDGTRYAGWQYQRSPPTIQCLIENALTRATKLERKDLRLVGASRTDTGVHAWGQ 223
           ++L IAYDGT Y+GWQ Q +  +IQ  I+ AL     L+++ + LVG+ RTD GVHA GQ
Sbjct: 4   YKLTIAYDGTNYSGWQIQPNASSIQQKIQEAL--CILLKKEKVVLVGSGRTDAGVHAKGQ 63

Query: 224 VAHFITPFNYDSLDNVHAALNGLLPADIRVREISPAVPDFHARFSTISKVYHYKIYNGTI 283
           VAHF    +Y  L  +H +LNGLLP DIR++ + P  P FH+++S I K YHY ++   +
Sbjct: 64  VAHFHFQ-DYIDLSRLHVSLNGLLPRDIRIKAVEPVSPRFHSQYSAIRKEYHYYLHLNKV 123

Query: 284 LDPFQRCYTYHCVYKLNYAAMREAANYFIGKHDFSAFANAAHNDRVV-DPVKVIFRFDVI 343
           +DPFQR Y++H   K++   +++AA  F G HDF++FAN AH      +PV+ ++R D+ 
Sbjct: 124 MDPFQRLYSWHFQRKIDVNILKKAAILFTGTHDFTSFANEAHRGTAAKNPVRTLYRLDIK 183

Query: 344 EMGPLVQLEVEGSGFLYRQVRNMVALLIQIGKEAIAPDVVPKILASGDRKELAKYAPCIP 403
                ++LE EG GFLY+ VRN+V  L+ +     A + + +I A+ +R++ +  A   P
Sbjct: 184 PNEGGLRLEFEGDGFLYKMVRNIVGTLMDVASHKRAIEEINQIFAAKNRRQASLAA---P 243

Query: 404 PQGLCLMSINYKEDH 418
           P+GL L+ + Y+ ++
Sbjct: 244 PEGLFLIQVFYENEN 252

[Close]

BLAST of Lcy02g008630 vs. ExPASy Swiss-Prot
Match: B1I1B5 (tRNA pseudouridine synthase A OS=Desulforudis audaxviator (strain MP104C) OX=477974 GN=truA PE=3 SV=1)

HSP 1 Score: 197.6 bits (501), Expect = 3.6e-49
Identity = 108/251 (43.03%), Postives = 144/251 (57.37%), Query Frame = 0


Query: 165 RLVIAYDGTRYAGWQYQRSP--PTIQCLIENALTRATKLERKDLRLVGASRTDTGVHAWG 224
           RL +AYDGT Y G+Q Q     PTIQ  +E  L    +L    L++ GASRTD GVHA G
Sbjct: 5   RLTLAYDGTAYHGFQKQSGSGLPTIQETLERCL---AELSGAALKVTGASRTDAGVHARG 64

Query: 225 QVAHFITPFNYDSLDNVHAALNGLLPADIRVREISPAVPDFHARFSTISKVYHYKIYNGT 284
           QV +F+T       + + AALNG+LP DI   +      DFHAR+S ++K Y Y +YN  
Sbjct: 65  QVVNFVTGRWGIPTERIPAALNGVLPGDIAALDAREVPADFHARYSAVAKTYSYTLYNHP 124

Query: 285 ILDPFQRCYTYHCVYKLNYAAMREAANYFIGKHDFSAFANAAHNDRVVDPVKVIFRFDVI 344
           +  PFQR Y+ H    L+  AMR AA + +G+HDFS F  A     V   V+ + R D+ 
Sbjct: 125 VRSPFQRLYSLHVPRALDLRAMRLAARHLMGRHDFSTFQAAGR--PVQSAVRTLTRADIE 184

Query: 345 EMGPLVQLEVEGSGFLYRQVRNMVALLIQIGKEAIAPDVVPKILASGDRKELAKYAPCIP 404
              PLV+L     GFLY  VR M   L+++G E + P+ +P I+ASGDR   A+  P +P
Sbjct: 185 AQAPLVRLVFRADGFLYNMVRIMAGTLLEVGLERLDPEALPDIIASGDR---ARAGPTVP 244

Query: 405 PQGLCLMSINY 414
           P GLCL  + Y
Sbjct: 245 PHGLCLEEVEY 247

[Close]

BLAST of Lcy02g008630 vs. ExPASy Swiss-Prot
Match: A4J151 (tRNA pseudouridine synthase A OS=Desulfotomaculum reducens (strain MI-1) OX=349161 GN=truA PE=3 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 4.1e-45
Identity = 103/251 (41.04%), Postives = 145/251 (57.77%), Query Frame = 0


Query: 165 RLVIAYDGTRYAGWQYQRSP--PTIQCLIENALTRATKLERKDLRLVGASRTDTGVHAWG 224
           +L +AYDGT Y G+Q QR     TIQ  +E AL   + + +  ++++GA RTD GVHA G
Sbjct: 5   KLTLAYDGTNYHGFQEQRGTGLATIQEALEKAL---STIAQTPIQVIGAGRTDAGVHAQG 64

Query: 225 QVAHFITPFNYDSLDNVHAALNGLLPADIRVREISPAVPDFHARFSTISKVYHYKIYNGT 284
           QV +F +       +    ALN LLP DI+V +      DFHARFS ++K Y Y IY+  
Sbjct: 65  QVVNFRSEKWPVPAEKAPLALNVLLPGDIKVVKAEEVPMDFHARFSAVAKTYRYSIYHHR 124

Query: 285 ILDPFQRCYTYHCVYKLNYAAMREAANYFIGKHDFSAFANAAHNDRVVDPVKVIFRFDVI 344
           ++ PF R Y YH   +L+  AM+E A Y +G +DF +F   A    V D ++ I+R D+I
Sbjct: 125 VMSPFHRYYCYHEPRRLDVNAMQEGAAYLLGTYDFKSF--QAQGTPVKDTIRTIYRADII 184

Query: 345 EMGPLVQLEVEGSGFLYRQVRNMVALLIQIGKEAIAPDVVPKILASGDRKELAKYAPCIP 404
           E  P++ L + G+GFLY  VR +   L+ IG   I P+ + KI+ S +R      A   P
Sbjct: 185 EDAPVINLYLRGNGFLYNMVRIITGTLLNIGFGKIKPEDMVKIIESKNRTLAGTTA---P 244

Query: 405 PQGLCLMSINY 414
           PQGLCLM + Y
Sbjct: 245 PQGLCLMEVEY 247

[Close]

BLAST of Lcy02g008630 vs. ExPASy Swiss-Prot
Match: Q8R7Y7 (tRNA pseudouridine synthase A OS=Caldanaerobacter subterraneus subsp. tengcongensis (strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4) OX=273068 GN=truA PE=3 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 1.0e-43
Identity = 106/248 (42.74%), Postives = 143/248 (57.66%), Query Frame = 0


Query: 166 LVIAYDGTRYAGWQYQRSPPTIQCLIENALTRATKLERKDLRLVGASRTDTGVHAWGQVA 225
           L+I YDGT Y GWQYQ++  T+Q ++E A+ + T    + + L+G+SRTDTGVHA  QVA
Sbjct: 2   LIIEYDGTNYHGWQYQKNAITVQEVLEKAIEKVT---GEKVNLIGSSRTDTGVHALYQVA 61

Query: 226 HFITPFNYDSLDNVHAALNGLLPADIRVREISPAVPDFHARFSTISKVYHYKIYNGTILD 285
           +F T       + +  ALN +LP D+ V +       FHAR+S  SK Y Y I N     
Sbjct: 62  NFKTKTKIPP-EKLPYALNAVLPDDVVVVKAKEVDKSFHARYSARSKRYRYLILNRQFPM 121

Query: 286 PFQRCYTYHCVYKLNYAAMREAANYFIGKHDFSAFANAAHNDRVVDPVKVIFRFDVIEMG 345
           P  R Y +H  Y L+  AM++AA +F G HDFSAF   A  ++ V+PVK IF   V + G
Sbjct: 122 PTMRNYCWHVPYPLDVEAMKKAAFFFRGTHDFSAF--KASGNKKVNPVKTIFDLTVEKEG 181

Query: 346 PLVQLEVEGSGFLYRQVRNMVALLIQIGKEAIAPDVVPKILASGDRKELAKYAPCIPPQG 405
            L+++EVE  GFLY  VR +V  L+ +G   I    +P I+ S DR    K     PPQG
Sbjct: 182 DLIKIEVEADGFLYNMVRIIVGTLVYVGLGKIKAGEIPAIIESKDR---TKAGITAPPQG 240

Query: 406 LCLMSINY 414
           L L+ I Y
Sbjct: 242 LYLVRIVY 240

[Close]

BLAST of Lcy02g008630 vs. ExPASy Swiss-Prot
Match: A3DJK8 (tRNA pseudouridine synthase A OS=Hungateiclostridium thermocellum (strain ATCC 27405 / DSM 1237 / JCM 9322 / NBRC 103400 / NCIMB 10682 / NRRL B-4536 / VPI 7372) OX=203119 GN=truA PE=3 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 6.6e-43
Identity = 102/249 (40.96%), Postives = 142/249 (57.03%), Query Frame = 0


Query: 165 RLVIAYDGTRYAGWQYQRSPPTIQCLIENALTRATKLERKDLRLVGASRTDTGVHAWGQV 224
           +L+I YDGT Y GWQ Q++  T+Q  IE A+   T  E+ D  L+GASRTD GVHA GQV
Sbjct: 5   KLIIEYDGTNYHGWQKQKNAKTVQDTIERAIKGLTG-EKVD--LIGASRTDFGVHALGQV 64

Query: 225 AHFITPFNYDSLDNVHAALNGLLPADIRVREISPAVPDFHARFSTISKVYHYKIYNGTIL 284
           A+FIT       D    ALN +LP DI ++E      DFHAR+    K Y Y IYN    
Sbjct: 65  ANFITNSGIPG-DRFSYALNRMLPDDIVIKESQEVDMDFHARYKAKGKRYRYLIYNSQFP 124

Query: 285 DPFQRCYTYHCVYKLNYAAMREAANYFIGKHDFSAFANAAHNDRVVDPVKVIFRFDVIEM 344
               R  TYH  +KL++ +M+ AA+YF+G HDFSAF ++  + +    V+ I    +   
Sbjct: 125 SALLRHRTYHVSHKLDFESMQRAASYFLGTHDFSAFRSSGSSAKT--SVRTITDVSLERE 184

Query: 345 GPLVQLEVEGSGFLYRQVRNMVALLIQIGKEAIAPDVVPKILASGDRKELAKYAPCIPPQ 404
             +V+ E+ G GFLY  VR +V  L+++G   I  D +P+I+ S  RK   + AP    +
Sbjct: 185 DKIVKFEIAGDGFLYNMVRIIVGTLMEVGIGKIRADEIPQIIESRKRKRAGRTAPA---E 244

Query: 405 GLCLMSINY 414
           GL L+ + Y
Sbjct: 245 GLYLVEVYY 244

[Close]

BLAST of Lcy02g008630 vs. ExPASy TrEMBL
Match: A0A1S3C7L6 (tRNA pseudouridine synthase OS=Cucumis melo OX=3656 GN=LOC103497746 PE=3 SV=1)

HSP 1 Score: 600.5 bits (1547), Expect = 6.8e-168
Identity = 284/333 (85.29%), Postives = 304/333 (91.29%), Query Frame = 0


Query: 110 MRCWIVGSAVLPPIPLPLSPTIPSPNGSSSSTNRRFPNAEDSCYVTEPPFPSFKWRLVIA 169
           MRCW VGS VLPPI LP SP IPSPNG+SSS++R FPNAEDS Y+TEPPFPSFKWRL+IA
Sbjct: 1   MRCWAVGSPVLPPISLPFSPIIPSPNGASSSSSRGFPNAEDSSYITEPPFPSFKWRLLIA 60

Query: 170 YDGTRYAGWQYQRSPPTIQCLIENALTRATKLERKDLRLVGASRTDTGVHAWGQVAHFIT 229
           YDGTRYAGWQYQRSPPTIQCLIE AL  ATKLERKDL LVGASRTD GVHAWGQVAHF+T
Sbjct: 61  YDGTRYAGWQYQRSPPTIQCLIEEALIGATKLERKDLHLVGASRTDKGVHAWGQVAHFVT 120

Query: 230 PFNYDSLDNVHAALNGLLPADIRVREISPAVPDFHARFSTISKVYHYKIYNGTILDPFQR 289
           PFNYDSL++VHAALNGLLP DIRVRE+SPA PDFHARFST+SKVYHYKIYNGTI+DPFQR
Sbjct: 121 PFNYDSLESVHAALNGLLPVDIRVREMSPAAPDFHARFSTLSKVYHYKIYNGTIMDPFQR 180

Query: 290 CYTYHCVYKLNYAAMREAANYFIGKHDFSAFANAAHNDRVVDPVKVIFRFDVIEMGPLVQ 349
           CYTYHCVYKLNYAAM+EAANYF+GKHDFSAF NAAHN+RVV+PVKVIFRFDVIEMG LVQ
Sbjct: 181 CYTYHCVYKLNYAAMKEAANYFVGKHDFSAFTNAAHNNRVVNPVKVIFRFDVIEMGALVQ 240

Query: 350 LEVEGSGFLYRQVRNMVALLIQIGKEAIAPDVVPKILASGDRKELAKYAPCIPPQGLCLM 409
           LEVEGSGFLYRQVRNMV LL+QIGKEA+ P+VVPKILAS DRKELAKYA  +PPQGLCL+
Sbjct: 241 LEVEGSGFLYRQVRNMVGLLVQIGKEALPPEVVPKILASRDRKELAKYASGVPPQGLCLV 300

Query: 410 SINYKEDHLKLPSGCPGTSFGRRHSVSKSSSPF 443
           SINYKEDHLKLPS CPGTS GR  SV K   PF
Sbjct: 301 SINYKEDHLKLPSDCPGTSLGRSRSVGKCKVPF 333

[Close]

BLAST of Lcy02g008630 vs. ExPASy TrEMBL
Match: A0A6J1L0L1 (tRNA pseudouridine synthase OS=Cucurbita maxima OX=3661 GN=LOC111499282 PE=3 SV=1)

HSP 1 Score: 594.7 bits (1532), Expect = 3.8e-166
Identity = 287/333 (86.19%), Postives = 300/333 (90.09%), Query Frame = 0


Query: 110 MRCWIVGSAVLPPIPLPLSPTIPSPNGSSSSTNRRFPNAEDSCYVTEPPFPSFKWRLVIA 169
           M CW VGSAVLP +P PLSP+IPS  G+ SST R FPN+EDS  V EP FPSFKWRLVIA
Sbjct: 1   MSCWAVGSAVLPSVPRPLSPSIPS-RGTLSSTGRGFPNSEDSSCVPEPDFPSFKWRLVIA 60

Query: 170 YDGTRYAGWQYQRSPPTIQCLIENALTRATKLERKDLRLVGASRTDTGVHAWGQVAHFIT 229
           YDGTRYAGWQYQRSPPTIQCLIE ALT AT+LERKDL LVGASRTD GVHAWGQVAHFIT
Sbjct: 61  YDGTRYAGWQYQRSPPTIQCLIEEALTGATRLERKDLHLVGASRTDKGVHAWGQVAHFIT 120

Query: 230 PFNYDSLDNVHAALNGLLPADIRVREISPAVPDFHARFSTISKVYHYKIYNGTILDPFQR 289
           PFNYDSLD +HAALNGLLPADIRVREISPAVPDFHARFST+SKVYHYKIYN  ILDPFQR
Sbjct: 121 PFNYDSLDRIHAALNGLLPADIRVREISPAVPDFHARFSTLSKVYHYKIYNDAILDPFQR 180

Query: 290 CYTYHCVYKLNYAAMREAANYFIGKHDFSAFANAAHNDRVVDPVKVIFRFDVIEMGPLVQ 349
           CYTYHCVYKLNYAAM+EAANYF+GKHDFSAFAN AHNDRVV+PVKVIFRFDVIEMG L+Q
Sbjct: 181 CYTYHCVYKLNYAAMKEAANYFVGKHDFSAFANTAHNDRVVNPVKVIFRFDVIEMGALIQ 240

Query: 350 LEVEGSGFLYRQVRNMVALLIQIGKEAIAPDVVPKILASGDRKELAKYAPCIPPQGLCLM 409
           LEVEGSGFLYRQVRNMVALL+QIGKEAI PDVVPKILAS DRK LAKY  CIPPQGLCL+
Sbjct: 241 LEVEGSGFLYRQVRNMVALLLQIGKEAIPPDVVPKILASRDRKVLAKYTTCIPPQGLCLV 300

Query: 410 SINYKEDHLKLPSGCPGTSFGRRHSVSKSSSPF 443
            INYKEDHLKLPS CPGTSFGR HSVSK   PF
Sbjct: 301 RINYKEDHLKLPSDCPGTSFGRSHSVSKCKLPF 332

[Close]

BLAST of Lcy02g008630 vs. ExPASy TrEMBL
Match: A0A6J1H621 (tRNA pseudouridine synthase OS=Cucurbita moschata OX=3662 GN=LOC111460439 PE=3 SV=1)

HSP 1 Score: 592.8 bits (1527), Expect = 1.4e-165
Identity = 284/333 (85.29%), Postives = 300/333 (90.09%), Query Frame = 0


Query: 110 MRCWIVGSAVLPPIPLPLSPTIPSPNGSSSSTNRRFPNAEDSCYVTEPPFPSFKWRLVIA 169
           M  W VGSAVLP +P  LSP+IPS NG SS T R FP +EDS  VTEP FPSFKWRLVIA
Sbjct: 1   MSYWAVGSAVLPSVPRLLSPSIPSRNGDSSPTGRGFPISEDSSCVTEPDFPSFKWRLVIA 60

Query: 170 YDGTRYAGWQYQRSPPTIQCLIENALTRATKLERKDLRLVGASRTDTGVHAWGQVAHFIT 229
           YDGTRYAGWQYQRSPPTIQCL+E ALT AT+LERKDL LVGASRTDTGVHAWGQVAHFIT
Sbjct: 61  YDGTRYAGWQYQRSPPTIQCLVEEALTGATRLERKDLHLVGASRTDTGVHAWGQVAHFIT 120

Query: 230 PFNYDSLDNVHAALNGLLPADIRVREISPAVPDFHARFSTISKVYHYKIYNGTILDPFQR 289
           PFNYDSLD +HAALNGLLPADIRVRE+SPAVPDFHARFST+SKVYHYKIYN  ILDPFQR
Sbjct: 121 PFNYDSLDRIHAALNGLLPADIRVREMSPAVPDFHARFSTLSKVYHYKIYNDAILDPFQR 180

Query: 290 CYTYHCVYKLNYAAMREAANYFIGKHDFSAFANAAHNDRVVDPVKVIFRFDVIEMGPLVQ 349
           CYTYHCVYKLNYAAM+EAANYF+GKHDFSAFAN AHNDRVV+PVKVIFRFDVIEMG L+Q
Sbjct: 181 CYTYHCVYKLNYAAMKEAANYFVGKHDFSAFANTAHNDRVVNPVKVIFRFDVIEMGALIQ 240

Query: 350 LEVEGSGFLYRQVRNMVALLIQIGKEAIAPDVVPKILASGDRKELAKYAPCIPPQGLCLM 409
           LEVEGSGFLYRQVRNMVALL+QIGKEAI PD+VPKILA+ DRKELAKY  CIPPQGLCL+
Sbjct: 241 LEVEGSGFLYRQVRNMVALLLQIGKEAIPPDIVPKILATRDRKELAKYTTCIPPQGLCLV 300

Query: 410 SINYKEDHLKLPSGCPGTSFGRRHSVSKSSSPF 443
            INYKEDHLKLPS CPGTSFGR HSVSK   PF
Sbjct: 301 RINYKEDHLKLPSDCPGTSFGRSHSVSKCKLPF 333

[Close]

BLAST of Lcy02g008630 vs. ExPASy TrEMBL
Match: A0A5D3BY40 (Protein TRIGALACTOSYLDIACYLGLYCEROL 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold46G00780 PE=3 SV=1)

HSP 1 Score: 592.0 bits (1525), Expect = 2.4e-165
Identity = 286/367 (77.93%), Postives = 312/367 (85.01%), Query Frame = 0


Query: 110 MRCWIVGSAVLPPIPLPLSPTIPSPNGSSSSTNRRFPNAEDSCYVTEPPFPSFKWRLVIA 169
           MRCW VGS VLPPI LP SP IPSPNG+SSS++R FPNAEDS Y+TEPPFPSFKWRL+IA
Sbjct: 1   MRCWAVGSPVLPPISLPFSPIIPSPNGASSSSSRGFPNAEDSSYITEPPFPSFKWRLLIA 60

Query: 170 YDGTRYAGWQYQRSPPTIQCLIENALTRATKLERKDLRLVGASRTDTGVHAWGQVAHFIT 229
           YDGTRYAGWQYQRSPPTIQCLIE AL  ATKLERKDL LVGASRTD GVHAWGQVAHF+T
Sbjct: 61  YDGTRYAGWQYQRSPPTIQCLIEEALIGATKLERKDLHLVGASRTDKGVHAWGQVAHFVT 120

Query: 230 PFNYDSLDNVHAALNGLLPADIRVREISPAVPDFHARFSTISKVYHYKIYNGTILDPFQR 289
           PFNYDSL++VHAALNGLLP DIRVRE+SPA PDFHARFST+SKVYHYKIYNGTI+DPFQR
Sbjct: 121 PFNYDSLESVHAALNGLLPVDIRVREMSPAAPDFHARFSTLSKVYHYKIYNGTIMDPFQR 180

Query: 290 CYTYHCVYKLNYAAMREAANYFIGKHDFSAFANAAHNDRVVDPVKVIFRFDVIEMGPLVQ 349
           CYTYHCVYKLNYAAM+EAANYF+GKHDFSAF NAAHN+RVV+PVKVIFRFDVIEMG LVQ
Sbjct: 181 CYTYHCVYKLNYAAMKEAANYFVGKHDFSAFTNAAHNNRVVNPVKVIFRFDVIEMGALVQ 240

Query: 350 LEVEGSGFLYRQVRNMVALLIQIGKEAIAPDVVPKILASGDRKELAKYAPCIPPQGLCLM 409
           LEVEGSGFLYRQVRNMV LL+QIGKEA+ P+VVPKILAS DRKELAKYA  +PPQGLCL+
Sbjct: 241 LEVEGSGFLYRQVRNMVGLLVQIGKEALPPEVVPKILASRDRKELAKYASGVPPQGLCLV 300

Query: 410 SINYKEDHLKLPSGCPGTSFGRRHSVSKSSSPFLLLDVGVSLSPVSVRLRKRAVQRLRRA 469
           SINYKEDHLKLPS CPGTS G                          R R+  +++LR A
Sbjct: 301 SINYKEDHLKLPSDCPGTSLGEGEG----------------------RRREETMKKLRWA 345

Query: 470 REGFFPL 477
            +GF+ L
Sbjct: 361 MDGFWDL 345

[Close]

BLAST of Lcy02g008630 vs. ExPASy TrEMBL
Match: A0A6J1L2M8 (tRNA pseudouridine synthase OS=Cucurbita maxima OX=3661 GN=LOC111499282 PE=3 SV=1)

HSP 1 Score: 589.7 bits (1519), Expect = 1.2e-164
Identity = 287/335 (85.67%), Postives = 300/335 (89.55%), Query Frame = 0


Query: 110 MRCWIVGSAVLPPIPLPLSPTIPSPNGSSSSTNRRFP--NAEDSCYVTEPPFPSFKWRLV 169
           M CW VGSAVLP +P PLSP+IPS  G+ SST R FP  N+EDS  V EP FPSFKWRLV
Sbjct: 1   MSCWAVGSAVLPSVPRPLSPSIPS-RGTLSSTGRGFPVMNSEDSSCVPEPDFPSFKWRLV 60

Query: 170 IAYDGTRYAGWQYQRSPPTIQCLIENALTRATKLERKDLRLVGASRTDTGVHAWGQVAHF 229
           IAYDGTRYAGWQYQRSPPTIQCLIE ALT AT+LERKDL LVGASRTD GVHAWGQVAHF
Sbjct: 61  IAYDGTRYAGWQYQRSPPTIQCLIEEALTGATRLERKDLHLVGASRTDKGVHAWGQVAHF 120

Query: 230 ITPFNYDSLDNVHAALNGLLPADIRVREISPAVPDFHARFSTISKVYHYKIYNGTILDPF 289
           ITPFNYDSLD +HAALNGLLPADIRVREISPAVPDFHARFST+SKVYHYKIYN  ILDPF
Sbjct: 121 ITPFNYDSLDRIHAALNGLLPADIRVREISPAVPDFHARFSTLSKVYHYKIYNDAILDPF 180

Query: 290 QRCYTYHCVYKLNYAAMREAANYFIGKHDFSAFANAAHNDRVVDPVKVIFRFDVIEMGPL 349
           QRCYTYHCVYKLNYAAM+EAANYF+GKHDFSAFAN AHNDRVV+PVKVIFRFDVIEMG L
Sbjct: 181 QRCYTYHCVYKLNYAAMKEAANYFVGKHDFSAFANTAHNDRVVNPVKVIFRFDVIEMGAL 240

Query: 350 VQLEVEGSGFLYRQVRNMVALLIQIGKEAIAPDVVPKILASGDRKELAKYAPCIPPQGLC 409
           +QLEVEGSGFLYRQVRNMVALL+QIGKEAI PDVVPKILAS DRK LAKY  CIPPQGLC
Sbjct: 241 IQLEVEGSGFLYRQVRNMVALLLQIGKEAIPPDVVPKILASRDRKVLAKYTTCIPPQGLC 300

Query: 410 LMSINYKEDHLKLPSGCPGTSFGRRHSVSKSSSPF 443
           L+ INYKEDHLKLPS CPGTSFGR HSVSK   PF
Sbjct: 301 LVRINYKEDHLKLPSDCPGTSFGRSHSVSKCKLPF 334

[Close]

BLAST of Lcy02g008630 vs. NCBI nr
Match: XP_008458279.1 (PREDICTED: tRNA pseudouridine synthase A 1 isoform X1 [Cucumis melo])

HSP 1 Score: 600.5 bits (1547), Expect = 1.4e-167
Identity = 284/333 (85.29%), Postives = 304/333 (91.29%), Query Frame = 0


Query: 110 MRCWIVGSAVLPPIPLPLSPTIPSPNGSSSSTNRRFPNAEDSCYVTEPPFPSFKWRLVIA 169
           MRCW VGS VLPPI LP SP IPSPNG+SSS++R FPNAEDS Y+TEPPFPSFKWRL+IA
Sbjct: 1   MRCWAVGSPVLPPISLPFSPIIPSPNGASSSSSRGFPNAEDSSYITEPPFPSFKWRLLIA 60

Query: 170 YDGTRYAGWQYQRSPPTIQCLIENALTRATKLERKDLRLVGASRTDTGVHAWGQVAHFIT 229
           YDGTRYAGWQYQRSPPTIQCLIE AL  ATKLERKDL LVGASRTD GVHAWGQVAHF+T
Sbjct: 61  YDGTRYAGWQYQRSPPTIQCLIEEALIGATKLERKDLHLVGASRTDKGVHAWGQVAHFVT 120

Query: 230 PFNYDSLDNVHAALNGLLPADIRVREISPAVPDFHARFSTISKVYHYKIYNGTILDPFQR 289
           PFNYDSL++VHAALNGLLP DIRVRE+SPA PDFHARFST+SKVYHYKIYNGTI+DPFQR
Sbjct: 121 PFNYDSLESVHAALNGLLPVDIRVREMSPAAPDFHARFSTLSKVYHYKIYNGTIMDPFQR 180

Query: 290 CYTYHCVYKLNYAAMREAANYFIGKHDFSAFANAAHNDRVVDPVKVIFRFDVIEMGPLVQ 349
           CYTYHCVYKLNYAAM+EAANYF+GKHDFSAF NAAHN+RVV+PVKVIFRFDVIEMG LVQ
Sbjct: 181 CYTYHCVYKLNYAAMKEAANYFVGKHDFSAFTNAAHNNRVVNPVKVIFRFDVIEMGALVQ 240

Query: 350 LEVEGSGFLYRQVRNMVALLIQIGKEAIAPDVVPKILASGDRKELAKYAPCIPPQGLCLM 409
           LEVEGSGFLYRQVRNMV LL+QIGKEA+ P+VVPKILAS DRKELAKYA  +PPQGLCL+
Sbjct: 241 LEVEGSGFLYRQVRNMVGLLVQIGKEALPPEVVPKILASRDRKELAKYASGVPPQGLCLV 300

Query: 410 SINYKEDHLKLPSGCPGTSFGRRHSVSKSSSPF 443
           SINYKEDHLKLPS CPGTS GR  SV K   PF
Sbjct: 301 SINYKEDHLKLPSDCPGTSLGRSRSVGKCKVPF 333

[Close]

BLAST of Lcy02g008630 vs. NCBI nr
Match: XP_004138518.2 (uncharacterized protein LOC101205797 [Cucumis sativus] >KGN45627.2 hypothetical protein Csa_005280 [Cucumis sativus])

HSP 1 Score: 599.4 bits (1544), Expect = 3.1e-167
Identity = 285/343 (83.09%), Postives = 310/343 (90.38%), Query Frame = 0


Query: 101 ELKHIPRRRMRCWIVGSAVLPPIPLPLSPTIPSPNGSSSSTNRRFPNAE-DSCYVTEPPF 160
           E+  +  +RMRCW VGS VLPPI LPLSP IPSPNG+SSS++R FPNAE D+ Y+ EP F
Sbjct: 12  EISELKTQRMRCWAVGSPVLPPISLPLSPIIPSPNGASSSSSRGFPNAEDDASYIKEPSF 71

Query: 161 PSFKWRLVIAYDGTRYAGWQYQRSPPTIQCLIENALTRATKLERKDLRLVGASRTDTGVH 220
           P FKWRL+IAYDGTRYAGWQYQRSPPTIQCLIE AL  ATKLERKDL LVGASRTD GVH
Sbjct: 72  PCFKWRLLIAYDGTRYAGWQYQRSPPTIQCLIEEALIGATKLERKDLHLVGASRTDKGVH 131

Query: 221 AWGQVAHFITPFNYDSLDNVHAALNGLLPADIRVREISPAVPDFHARFSTISKVYHYKIY 280
           AWGQVAHF+TPFNYDSL++VHAALNGLLP DIRVRE+SPAVPDFHARFST+SKVYHYKIY
Sbjct: 132 AWGQVAHFVTPFNYDSLESVHAALNGLLPVDIRVREMSPAVPDFHARFSTLSKVYHYKIY 191

Query: 281 NGTILDPFQRCYTYHCVYKLNYAAMREAANYFIGKHDFSAFANAAHNDRVVDPVKVIFRF 340
           +GTI+DPFQRCYTYHCVYKLNYAAM+EAANYF+GKHDFSAF NAAHNDRVV+PVKVIFRF
Sbjct: 192 SGTIMDPFQRCYTYHCVYKLNYAAMKEAANYFVGKHDFSAFTNAAHNDRVVNPVKVIFRF 251

Query: 341 DVIEMGPLVQLEVEGSGFLYRQVRNMVALLIQIGKEAIAPDVVPKILASGDRKELAKYAP 400
           DVIEMG LVQLEVEGSGFLYRQVRNMV LL+QIGKEA+ P+VVPKILAS DR+ELAKYA 
Sbjct: 252 DVIEMGALVQLEVEGSGFLYRQVRNMVGLLVQIGKEALPPEVVPKILASRDRRELAKYAS 311

Query: 401 CIPPQGLCLMSINYKEDHLKLPSGCPGTSFGRRHSVSKSSSPF 443
            +PPQGLCL+SINYKEDHLKLPS CPGTSFGR  SVSK   PF
Sbjct: 312 GVPPQGLCLVSINYKEDHLKLPSDCPGTSFGRTRSVSKCKVPF 354

[Close]

BLAST of Lcy02g008630 vs. NCBI nr
Match: XP_023549337.1 (uncharacterized protein LOC111807720 isoform X4 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 596.7 bits (1537), Expect = 2.0e-166
Identity = 287/333 (86.19%), Postives = 301/333 (90.39%), Query Frame = 0


Query: 110 MRCWIVGSAVLPPIPLPLSPTIPSPNGSSSSTNRRFPNAEDSCYVTEPPFPSFKWRLVIA 169
           M CW VGSAVLP +P PLSP IPS NG S ST R FP +EDS  VTEP FPSFKWRLV+A
Sbjct: 1   MSCWAVGSAVLPSVPRPLSP-IPSRNGDSPSTGRGFPISEDSSCVTEPDFPSFKWRLVVA 60

Query: 170 YDGTRYAGWQYQRSPPTIQCLIENALTRATKLERKDLRLVGASRTDTGVHAWGQVAHFIT 229
           YDGTRYAGWQYQRSPPTIQCLIE ALT AT+LERKDL LVGASRTDTGVHAWGQVAHFIT
Sbjct: 61  YDGTRYAGWQYQRSPPTIQCLIEEALTGATRLERKDLHLVGASRTDTGVHAWGQVAHFIT 120

Query: 230 PFNYDSLDNVHAALNGLLPADIRVREISPAVPDFHARFSTISKVYHYKIYNGTILDPFQR 289
           PFNYDSLD +HAALNGLLPADIRVREISPAVPDFHARFST+SKVYHYKIYN  ILDPFQR
Sbjct: 121 PFNYDSLDRIHAALNGLLPADIRVREISPAVPDFHARFSTLSKVYHYKIYNDAILDPFQR 180

Query: 290 CYTYHCVYKLNYAAMREAANYFIGKHDFSAFANAAHNDRVVDPVKVIFRFDVIEMGPLVQ 349
           CYTYHCVYKLNYAAM+EAANYF+GKHDFSAFANAAHNDRVV+PVKV+FRFDVIEMG L+Q
Sbjct: 181 CYTYHCVYKLNYAAMKEAANYFVGKHDFSAFANAAHNDRVVNPVKVVFRFDVIEMGALIQ 240

Query: 350 LEVEGSGFLYRQVRNMVALLIQIGKEAIAPDVVPKILASGDRKELAKYAPCIPPQGLCLM 409
           LEVEGSGFLYRQVRNMVALL+QIGKEAI PDVVPKILA+ DRKELAKY  CIPP GLCL+
Sbjct: 241 LEVEGSGFLYRQVRNMVALLLQIGKEAIPPDVVPKILATRDRKELAKYTTCIPPHGLCLV 300

Query: 410 SINYKEDHLKLPSGCPGTSFGRRHSVSKSSSPF 443
            INYKEDHLKLPS CPGTSFGR HSVSK   PF
Sbjct: 301 RINYKEDHLKLPSDCPGTSFGRSHSVSKCKLPF 332

[Close]

BLAST of Lcy02g008630 vs. NCBI nr
Match: XP_038875516.1 (tRNA pseudouridine synthase A 1 isoform X1 [Benincasa hispida])

HSP 1 Score: 595.9 bits (1535), Expect = 3.5e-166
Identity = 285/333 (85.59%), Postives = 301/333 (90.39%), Query Frame = 0


Query: 110 MRCWIVGSAVLPPIPLPLSPTIPSPNGSSSSTNRRFPNAEDSCYVTEPPFPSFKWRLVIA 169
           MRCW VGS VLPPI LPLSP IP PNG+SSS++R  PNAEDS  +  PPFPSFKWRL+IA
Sbjct: 1   MRCWAVGSPVLPPISLPLSPAIPFPNGASSSSSRGSPNAEDSSCIIAPPFPSFKWRLLIA 60

Query: 170 YDGTRYAGWQYQRSPPTIQCLIENALTRATKLERKDLRLVGASRTDTGVHAWGQVAHFIT 229
           YDGTRYAGWQYQRSPPTIQCLIE AL  ATKLERKDL LVGASRTD GVHAWGQVAHFIT
Sbjct: 61  YDGTRYAGWQYQRSPPTIQCLIEEALIGATKLERKDLHLVGASRTDKGVHAWGQVAHFIT 120

Query: 230 PFNYDSLDNVHAALNGLLPADIRVREISPAVPDFHARFSTISKVYHYKIYNGTILDPFQR 289
           PFNYDSL++VHAALNGLLP DIRVREISPA PDFHARFST+SKVYHYKIYNG ILDPFQR
Sbjct: 121 PFNYDSLESVHAALNGLLPVDIRVREISPAAPDFHARFSTLSKVYHYKIYNGAILDPFQR 180

Query: 290 CYTYHCVYKLNYAAMREAANYFIGKHDFSAFANAAHNDRVVDPVKVIFRFDVIEMGPLVQ 349
           CYTYHCVYKLNYAAM+EAANYF+GKHDFSAF NAAHNDRVV+PVKVIFRFDVI+MGPLVQ
Sbjct: 181 CYTYHCVYKLNYAAMKEAANYFVGKHDFSAFTNAAHNDRVVNPVKVIFRFDVIDMGPLVQ 240

Query: 350 LEVEGSGFLYRQVRNMVALLIQIGKEAIAPDVVPKILASGDRKELAKYAPCIPPQGLCLM 409
           LEVEGSGFLYRQVRNMV LL+QIGKEAI PDVVPKILAS DR+ELAKYA  +PPQGLCL+
Sbjct: 241 LEVEGSGFLYRQVRNMVGLLVQIGKEAIPPDVVPKILASQDRRELAKYASGVPPQGLCLV 300

Query: 410 SINYKEDHLKLPSGCPGTSFGRRHSVSKSSSPF 443
           SINYKEDHLKLPS CPGTS GR  SVSK   PF
Sbjct: 301 SINYKEDHLKLPSDCPGTSVGRNRSVSKCKLPF 333

[Close]

BLAST of Lcy02g008630 vs. NCBI nr
Match: XP_023006605.1 (uncharacterized protein LOC111499282 isoform X2 [Cucurbita maxima])

HSP 1 Score: 594.7 bits (1532), Expect = 7.8e-166
Identity = 287/333 (86.19%), Postives = 300/333 (90.09%), Query Frame = 0


Query: 110 MRCWIVGSAVLPPIPLPLSPTIPSPNGSSSSTNRRFPNAEDSCYVTEPPFPSFKWRLVIA 169
           M CW VGSAVLP +P PLSP+IPS  G+ SST R FPN+EDS  V EP FPSFKWRLVIA
Sbjct: 1   MSCWAVGSAVLPSVPRPLSPSIPS-RGTLSSTGRGFPNSEDSSCVPEPDFPSFKWRLVIA 60

Query: 170 YDGTRYAGWQYQRSPPTIQCLIENALTRATKLERKDLRLVGASRTDTGVHAWGQVAHFIT 229
           YDGTRYAGWQYQRSPPTIQCLIE ALT AT+LERKDL LVGASRTD GVHAWGQVAHFIT
Sbjct: 61  YDGTRYAGWQYQRSPPTIQCLIEEALTGATRLERKDLHLVGASRTDKGVHAWGQVAHFIT 120

Query: 230 PFNYDSLDNVHAALNGLLPADIRVREISPAVPDFHARFSTISKVYHYKIYNGTILDPFQR 289
           PFNYDSLD +HAALNGLLPADIRVREISPAVPDFHARFST+SKVYHYKIYN  ILDPFQR
Sbjct: 121 PFNYDSLDRIHAALNGLLPADIRVREISPAVPDFHARFSTLSKVYHYKIYNDAILDPFQR 180

Query: 290 CYTYHCVYKLNYAAMREAANYFIGKHDFSAFANAAHNDRVVDPVKVIFRFDVIEMGPLVQ 349
           CYTYHCVYKLNYAAM+EAANYF+GKHDFSAFAN AHNDRVV+PVKVIFRFDVIEMG L+Q
Sbjct: 181 CYTYHCVYKLNYAAMKEAANYFVGKHDFSAFANTAHNDRVVNPVKVIFRFDVIEMGALIQ 240

Query: 350 LEVEGSGFLYRQVRNMVALLIQIGKEAIAPDVVPKILASGDRKELAKYAPCIPPQGLCLM 409
           LEVEGSGFLYRQVRNMVALL+QIGKEAI PDVVPKILAS DRK LAKY  CIPPQGLCL+
Sbjct: 241 LEVEGSGFLYRQVRNMVALLLQIGKEAIPPDVVPKILASRDRKVLAKYTTCIPPQGLCLV 300

Query: 410 SINYKEDHLKLPSGCPGTSFGRRHSVSKSSSPF 443
            INYKEDHLKLPS CPGTSFGR HSVSK   PF
Sbjct: 301 RINYKEDHLKLPSDCPGTSFGRSHSVSKCKLPF 332

[Close]

BLAST of Lcy02g008630 vs. TAIR 10
Match: AT3G06950.1 (Pseudouridine synthase family protein )

HSP 1 Score: 420.6 bits (1080), Expect = 1.9e-117
Identity = 210/327 (64.22%), Postives = 247/327 (75.54%), Query Frame = 0


Query: 117 SAVLPPIPLPLSPTIPSPNGSSSSTNRRFPNAEDSCYVTEPPFPSFKWRLVIAYDGTRYA 176
           S V P +P    P++ +    SS  N    N   S  V++    ++KWRLVIAYDGTR+A
Sbjct: 2   SCVTPALP----PSLFTNGYLSSPQNISMTNLNSSVKVSDS--GAYKWRLVIAYDGTRFA 61

Query: 177 GWQYQRSPPTIQCLIENALTRATKLERKDLRLVGASRTDTGVHAWGQVAHFITPFNYDSL 236
           GWQYQ SPPTIQ ++E AL + T+L RK+L+L+GA RTD GVHAWGQVAHF+TPFNY SL
Sbjct: 62  GWQYQESPPTIQSMLEKALIQITELGRKELQLIGAGRTDAGVHAWGQVAHFVTPFNYTSL 121

Query: 237 DNVHAALNGLLPADIRVREISPAVPDFHARFSTISKVYHYKIYNGTILDPFQRCYTYHCV 296
           D+ HAALNGLLP DIRVRE+S AVP+FHARFS  SKVY Y+IYN T +DPFQR + YHC 
Sbjct: 122 DSFHAALNGLLPKDIRVRELSAAVPEFHARFSASSKVYRYQIYNDTFMDPFQRHWAYHCA 181

Query: 297 YKLNYAAMREAANYFIGKHDFSAFANAAHNDRVVDPVKVIFRFDVIEMGPLVQLEVEGSG 356
           YKLN + MREAAN F+GKHDFSAFANA   D V DP+K I RFDVI+MG L+QLEVEGSG
Sbjct: 182 YKLNASKMREAANLFVGKHDFSAFANATREDGVPDPLKTISRFDVIQMGSLLQLEVEGSG 241

Query: 357 FLYRQVRNMVALLIQIGKEAIAPDVVPKILASGDRKELAKYAPC-IPPQGLCLMSINYKE 416
           FLYRQVRNMVALLIQIGKEA+  D+VP IL + DR+ LAKY      P GLCL+S+ YKE
Sbjct: 242 FLYRQVRNMVALLIQIGKEALDSDIVPMILETKDRRVLAKYTSLPASPHGLCLVSVKYKE 301

Query: 417 DHLKLPSGCPGTSFGRRHSVSKSSSPF 443
           DHLKLP  CP TS GR H+++K   PF
Sbjct: 302 DHLKLPLDCPVTSSGRHHTITKCKLPF 322

[Close]

BLAST of Lcy02g008630 vs. TAIR 10
Match: AT1G34150.1 (Pseudouridine synthase family protein )

HSP 1 Score: 81.3 bits (199), Expect = 2.7e-15
Identity = 86/279 (30.82%), Postives = 114/279 (40.86%), Query Frame = 0


Query: 133 SPNGSSSSTNRRFPNAEDSCYVTEPPFPSFKWRLVIAYDGTRYAGWQYQ-RSPPTIQCLI 192
           S + SSS   RR     D   +           L I Y G R+ G+  + +  P+I+  +
Sbjct: 61  SLSDSSSLVRRRRVRKGDKNSIPSHLISKRYVALKIMYFGKRFYGFSAEAQMEPSIESEV 120

Query: 193 ENALTRATKL--ERKDLRLVGASRTDTGVHAWGQVAHFITPFNY-----DSLDNVHA--- 252
             AL R   L  ++KD       RTD GV + GQV              DS   V+    
Sbjct: 121 FKALERTRLLVGDKKDSCYSRCGRTDKGVSSTGQVIALFLRSRLKSPPGDSKAQVNGRTG 180

Query: 253 ---------ALNGLLPADIRVREISPAVPDFHARFSTISKVYHYKIYNGTILDPFQRCYT 312
                     LN  LP DIRV   SPA  DFHARFS  ++ Y Y  +             
Sbjct: 181 ERPEYDYVRVLNRALPDDIRVIGWSPAPIDFHARFSCYAREYKYFFWR------------ 240

Query: 313 YHCVYKLNYAAMREAANYFIGKHDFSAF-----ANAAHNDRVVDPVKVIFRFDVIEMGPL 372
                 LN +AM  A   FIG+HDF  F     AN     R V   +V    +  E   L
Sbjct: 241 ----QNLNLSAMDFAGKKFIGEHDFRNFCKMDVANVHCYTRRVTFFEVSPCQNSHEGDQL 300

Query: 373 VQLEVEGSGFLYRQVRNMVALLIQIGKEAIAPDVVPKIL 387
               + GS FL+ Q+R MVA+L  IG+   + DV+  +L
Sbjct: 301 CTFTMRGSAFLWHQIRCMVAVLFMIGQGVESVDVIDTLL 323

[Close]

BLAST of Lcy02g008630 vs. TAIR 10
Match: AT5G35400.1 (Pseudouridine synthase family protein )

HSP 1 Score: 54.7 bits (130), Expect = 2.7e-07
Identity = 38/123 (30.89%), Postives = 59/123 (47.97%), Query Frame = 0


Query: 164 WRLVIAYDGTRYAGWQYQRSPPTIQCLIENAL------TRATKLERK----DLRLVGASR 223
           +++V++Y+G  + GWQ Q    T+Q ++E +L       +A  L++K    + R++ A R
Sbjct: 95  FKIVLSYNGASFDGWQKQPDLHTVQGVVEKSLGGFVDERKAQLLKKKCKPLEGRVLVAGR 154

Query: 224 TDTGVHAWGQVAHFITPFNYDSLDNVHAALNGLLPADIRVREISPAVPDFHARFSTISKV 277
           TD GV A  QV  F T         +  A+N      +RV  IS     FH  FS   + 
Sbjct: 155 TDKGVSALNQVCSFYTWRKDIEPIAIEDAINKDASGKLRVVSISKVSRSFHPNFSAKWRR 214

[Close]

BLAST of Lcy02g008630 vs. TAIR 10
Match: AT5G35400.2 (Pseudouridine synthase family protein )

HSP 1 Score: 54.7 bits (130), Expect = 2.7e-07
Identity = 38/123 (30.89%), Postives = 59/123 (47.97%), Query Frame = 0


Query: 164 WRLVIAYDGTRYAGWQYQRSPPTIQCLIENAL------TRATKLERK----DLRLVGASR 223
           +++V++Y+G  + GWQ Q    T+Q ++E +L       +A  L++K    + R++ A R
Sbjct: 95  FKIVLSYNGASFDGWQKQPDLHTVQGVVEKSLGGFVDERKAQLLKKKCKPLEGRVLVAGR 154

Query: 224 TDTGVHAWGQVAHFITPFNYDSLDNVHAALNGLLPADIRVREISPAVPDFHARFSTISKV 277
           TD GV A  QV  F T         +  A+N      +RV  IS     FH  FS   + 
Sbjct: 155 TDKGVSALNQVCSFYTWRKDIEPIAIEDAINKDASGKLRVVSISKVSRSFHPNFSAKWRR 214

The following BLAST results are available for this feature:

BLAST of Lcy02g008630 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6MEE7	1.3e-51	40.78	tRNA pseudouridine synthase A 1 OS=Protochlamydia amoebophila (strain UWE25) OX=...	[more]
B1I1B5	3.6e-49	43.03	tRNA pseudouridine synthase A OS=Desulforudis audaxviator (strain MP104C) OX=477...	[more]
A4J151	4.1e-45	41.04	tRNA pseudouridine synthase A OS=Desulfotomaculum reducens (strain MI-1) OX=3491...	[more]
Q8R7Y7	1.0e-43	42.74	tRNA pseudouridine synthase A OS=Caldanaerobacter subterraneus subsp. tengcongen...	[more]
A3DJK8	6.6e-43	40.96	tRNA pseudouridine synthase A OS=Hungateiclostridium thermocellum (strain ATCC 2...	[more]

BLAST of Lcy02g008630 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3C7L6	6.8e-168	85.29	tRNA pseudouridine synthase OS=Cucumis melo OX=3656 GN=LOC103497746 PE=3 SV=1	[more]
A0A6J1L0L1	3.8e-166	86.19	tRNA pseudouridine synthase OS=Cucurbita maxima OX=3661 GN=LOC111499282 PE=3 SV=...	[more]
A0A6J1H621	1.4e-165	85.29	tRNA pseudouridine synthase OS=Cucurbita moschata OX=3662 GN=LOC111460439 PE=3 S...	[more]
A0A5D3BY40	2.4e-165	77.93	Protein TRIGALACTOSYLDIACYLGLYCEROL 4 OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A6J1L2M8	1.2e-164	85.67	tRNA pseudouridine synthase OS=Cucurbita maxima OX=3661 GN=LOC111499282 PE=3 SV=...	[more]

BLAST of Lcy02g008630 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008458279.1	1.4e-167	85.29	PREDICTED: tRNA pseudouridine synthase A 1 isoform X1 [Cucumis melo]	[more]
XP_004138518.2	3.1e-167	83.09	uncharacterized protein LOC101205797 [Cucumis sativus] >KGN45627.2 hypothetical ...	[more]
XP_023549337.1	2.0e-166	86.19	uncharacterized protein LOC111807720 isoform X4 [Cucurbita pepo subsp. pepo]	[more]
XP_038875516.1	3.5e-166	85.59	tRNA pseudouridine synthase A 1 isoform X1 [Benincasa hispida]	[more]
XP_023006605.1	7.8e-166	86.19	uncharacterized protein LOC111499282 isoform X2 [Cucurbita maxima]	[more]

BLAST of Lcy02g008630 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G06950.1	1.9e-117	64.22	Pseudouridine synthase family protein	[more]
AT1G34150.1	2.7e-15	30.82	Pseudouridine synthase family protein	[more]
AT5G35400.1	2.7e-07	30.89	Pseudouridine synthase family protein	[more]
AT5G35400.2	2.7e-07	30.89	Pseudouridine synthase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR020097	Pseudouridine synthase I, TruA, alpha/beta domain	PFAM	PF01416	PseudoU_synth_1	coord: 307..413 e-value: 1.1E-23 score: 83.8 coord: 168..267 e-value: 9.1E-6 score: 26.1
IPR001406	Pseudouridine synthase I, TruA	TIGRFAM	TIGR00071	TIGR00071	coord: 166..399 e-value: 3.1E-55 score: 185.3
IPR001406	Pseudouridine synthase I, TruA	PANTHER	PTHR11142	PSEUDOURIDYLATE SYNTHASE	coord: 157..426
IPR001406	Pseudouridine synthase I, TruA	HAMAP	MF_00171	TruA	coord: 162..413 score: 32.308907
IPR001406	Pseudouridine synthase I, TruA	CDD	cd02570	PseudoU_synth_EcTruA	coord: 166..413 e-value: 6.87366E-105 score: 312.485
IPR020095	Pseudouridine synthase I, TruA, C-terminal	GENE3D	3.30.70.660		coord: 270..412 e-value: 8.5E-38 score: 131.2
IPR020094	Pseudouridine synthase TruA/RsuA/RluB/E/F, N-terminal	GENE3D	3.30.70.580		coord: 161..269 e-value: 4.5E-29 score: 102.8
None	No IPR available	PIRSR	PIRSR001430-2	PIRSR001430-2	coord: 203..408 e-value: 2.0E-61 score: 205.1
None	No IPR available	PANTHER	PTHR11142:SF0	TRNA PSEUDOURIDINE SYNTHASE-LIKE 1	coord: 157..426
IPR020103	Pseudouridine synthase, catalytic domain superfamily	SUPERFAMILY	55120	Pseudouridine synthase	coord: 162..418

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy02g008630.1	Lcy02g008630.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0034196	acylglycerol transport
biological_process	GO:1990052	ER to chloroplast lipid transport
biological_process	GO:0001522	pseudouridine synthesis
biological_process	GO:0008033	tRNA processing
biological_process	GO:0009451	RNA modification
molecular_function	GO:0070300	phosphatidic acid binding
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0106029	tRNA pseudouridine synthase activity
molecular_function	GO:0009982	pseudouridine synthase activity