Lcy02g007910 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTGACATTTCCTCTTCTGCAAATCAGCCAACCAATCAATCCGTTATTGATCTCTATGTCAATCCTTACTACCTTCATCAATCTAATGGAACAAATCTTGTTCTCGTTTCTGAATTGCTCACGGAGTCAAATTATACCTCCTGGAATCAAGCAATGATGATCGGTCTCACAGTGAAAAATAAGGTAGGATTTATTGATGGGTCTGTAACGCGTTCGACTAGTAATCTTCTTCGTTCTTGGACGATTTGCAATGGTGTGGTGAAAGCCTGGATTCTAAATACTCTTTCTAAAGAGAATCTCTGCTAGTATCAACTTCTCCGATTCTGCTCGTGATATGTGGCTCAATCTTCAGCAACGATATCAAAGAAAAAACCACCCGCGTATTTTTCAGTTATGGCGCGAAATCTCAAATCTGGTTCAAGATCAATTGTCCGTTACTGCCTATTTTGCGAAGCTCAAGACTCTCTGGAACGAATTGATATCTTATCGCCCTTCTTGCACCTGTGGTCTTTGTTCCTGCGGTGGCGTAAAAGATTTGGTGAAATATTTTGAAACAAAACATGTAATGGCCTTTTTAATGGGGCTTAATGAGTCTTTCGATCAACTTCGCACACAATTGCTATTAACTCGAGCCTTCTATTCTAAGAGTTTTTCGCTTGCTGCCCAAGAATTCGAACAACGAACTTCTTCATCCTCATCAACGAACAACGAACAACGAACACGGTTGACCGTTCCTACAAACTTCATGGATACCCACCTGGGTATCGGAATCAAAAGGCTAGTTCTACAAATTCAACTCCAGCCAAGGTCGATTCTACTGGAGTTCCCAACTTAA ATGGCTGACATTTCCTCTTCTGCAAATCAGCCAACCAATCAATCCGTTATTGATCTCTATGTCAATCCTTACTACCTTCATCAATCTAATGGAACAAATCTTGTTCTCGTTTCTGAATTGCTCACGGAGTCAAATTATACCTCCTGGAATCAAGCAATGATGATCGGTCTCACAGTGAAAAATAAGTTATGGCGCGAAATCTCAAATCTGGTTCAAGATCAATTGTCCGTTACTGCCTATTTTGCGAAGCTCAAGACTCTCTGGAACGAATTGATATCTTATCGCCCTTCTTGCACCTGTGGTCTTTGTTCCTGCGGTGGCGTAAAAGATTTGGTGAAATATTTTGAAACAAAACATGTAATGGCCTTTTTAATGGGGCTTAATGAGTCTTTCGATCAACTTCGCACACAATTGCTATTAACTCGAGCCTTCTATTCTAAGAGTTTTTCGCTTGCTGCCCAAGAATTCGAACAACGAACTTCTTCATCCTCATCAACGAACAACGAACAACGAACACGGTTGACCGTTCCTACAAACTTCATGGATACCCACCTGGGTATCGGAATCAAAAGGCTAGTTCTACAAATTCAACTCCAGCCAAGGTCGATTCTACTGGAGTTCCCAACTTAA ATGGCTGACATTTCCTCTTCTGCAAATCAGCCAACCAATCAATCCGTTATTGATCTCTATGTCAATCCTTACTACCTTCATCAATCTAATGGAACAAATCTTGTTCTCGTTTCTGAATTGCTCACGGAGTCAAATTATACCTCCTGGAATCAAGCAATGATGATCGGTCTCACAGTGAAAAATAAGTTATGGCGCGAAATCTCAAATCTGGTTCAAGATCAATTGTCCGTTACTGCCTATTTTGCGAAGCTCAAGACTCTCTGGAACGAATTGATATCTTATCGCCCTTCTTGCACCTGTGGTCTTTGTTCCTGCGGTGGCGTAAAAGATTTGGTGAAATATTTTGAAACAAAACATGTAATGGCCTTTTTAATGGGGCTTAATGAGTCTTTCGATCAACTTCGCACACAATTGCTATTAACTCGAGCCTTCTATTCTAAGAGTTTTTCGCTTGCTGCCCAAGAATTCGAACAACGAACTTCTTCATCCTCATCAACGAACAACGAACAACGAACACGGTTGACCGTTCCTACAAACTTCATGGATACCCACCTGGGTATCGGAATCAAAAGGCTAGTTCTACAAATTCAACTCCAGCCAAGGTCGATTCTACTGGAGTTCCCAACTTAA MADISSSANQPTNQSVIDLYVNPYYLHQSNGTNLVLVSELLTESNYTSWNQAMMIGLTVKNKLWREISNLVQDQLSVTAYFAKLKTLWNELISYRPSCTCGLCSCGGVKDLVKYFETKHVMAFLMGLNESFDQLRTQLLLTRAFYSKSFSLAAQEFEQRTSSSSSTNNEQRTRLTVPTNFMDTHLGIGIKRLVLQIQLQPRSILLEFPT Homology
BLAST of Lcy02g007910 vs. ExPASy TrEMBL
Match: A0A6J1DNP7 (uncharacterized protein LOC111022065 OS=Momordica charantia OX=3673 GN=LOC111022065 PE=4 SV=1) HSP 1 Score: 155.2 bits (391), Expect = 3.0e-34 Identity = 93/246 (37.80%), Postives = 131/246 (53.25%), Query Frame = 0
BLAST of Lcy02g007910 vs. ExPASy TrEMBL
Match: A0A6J1DIP8 (uncharacterized protein LOC111020399 OS=Momordica charantia OX=3673 GN=LOC111020399 PE=4 SV=1) HSP 1 Score: 151.8 bits (382), Expect = 3.3e-33 Identity = 96/236 (40.68%), Postives = 123/236 (52.12%), Query Frame = 0
BLAST of Lcy02g007910 vs. ExPASy TrEMBL
Match: A0A5J4ZHF9 (Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_017116 PE=4 SV=1) HSP 1 Score: 150.6 bits (379), Expect = 7.3e-33 Identity = 89/212 (41.98%), Postives = 124/212 (58.49%), Query Frame = 0
BLAST of Lcy02g007910 vs. ExPASy TrEMBL
Match: A0A5J5C4X6 (Retrotran_gag_3 domain-containing protein OS=Nyssa sinensis OX=561372 GN=F0562_001883 PE=4 SV=1) HSP 1 Score: 147.9 bits (372), Expect = 4.7e-32 Identity = 82/177 (46.33%), Postives = 119/177 (67.23%), Query Frame = 0
BLAST of Lcy02g007910 vs. ExPASy TrEMBL
Match: A0A5J5B2C5 (Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_029212 PE=4 SV=1) HSP 1 Score: 137.9 bits (346), Expect = 4.9e-29 Identity = 90/247 (36.44%), Postives = 126/247 (51.01%), Query Frame = 0
BLAST of Lcy02g007910 vs. NCBI nr
Match: XP_022154919.1 (uncharacterized protein LOC111022065 [Momordica charantia]) HSP 1 Score: 155.2 bits (391), Expect = 6.1e-34 Identity = 93/246 (37.80%), Postives = 131/246 (53.25%), Query Frame = 0
BLAST of Lcy02g007910 vs. NCBI nr
Match: XP_022152756.1 (uncharacterized protein LOC111020399 [Momordica charantia]) HSP 1 Score: 151.8 bits (382), Expect = 6.7e-33 Identity = 96/236 (40.68%), Postives = 123/236 (52.12%), Query Frame = 0
BLAST of Lcy02g007910 vs. NCBI nr
Match: XP_038875043.1 (uncharacterized protein LOC120067569 [Benincasa hispida]) HSP 1 Score: 151.4 bits (381), Expect = 8.8e-33 Identity = 93/221 (42.08%), Postives = 118/221 (53.39%), Query Frame = 0
BLAST of Lcy02g007910 vs. NCBI nr
Match: XP_038874906.1 (uncharacterized protein LOC120067409 [Benincasa hispida]) HSP 1 Score: 151.0 bits (380), Expect = 1.2e-32 Identity = 90/211 (42.65%), Postives = 111/211 (52.61%), Query Frame = 0
BLAST of Lcy02g007910 vs. NCBI nr
Match: KAA8517066.1 (hypothetical protein F0562_017116 [Nyssa sinensis]) HSP 1 Score: 150.6 bits (379), Expect = 1.5e-32 Identity = 89/212 (41.98%), Postives = 124/212 (58.49%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
Relationships
The following mRNA feature(s) are a part of this gene:
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