IVF0010229 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CCATTATGGAGGTTTCCTAAATTCATGAAAATACCCAACAAAATGTACGTTCGTATCATATAATTTGGATATGTTTGGAGCTCAGATTCTTGAAATGGTGGCGAAATCATGTCAACATCTTCTCTCTTTCTCTCTCTTCTTTGAATCTTCCGTTTCCTTTTTTATGCTTATCTTTTGCCAAAAGTAACGAATTCAACTCGTGAATTTCCTCGTTTTTCAACGCCGCAAACTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCAAATTGATATACGGCTACAATGGATTCGGATGTTGTGTGGTCGGTAGAGATGGAGTTGGAACCGGAGATTGATCGATTGCCGATTGACCTATTGGCTCATATTTTTGCTATGATCACCTCCTTCACCGATTTGGCTCAGTAATTCATTTTCAATTTCGGCTTTGTTGAATTTTTTTTCTTCAATTGCTATTTTTATTTCCCCCTAAATTTGAGGGTTTATGCGATTGTGGAAAAACGCAGGGCGTGCGGCGTATGTAGAAAATGGAAGGAAGGAGTTAAATTGTCTCTCGGTAGGAGGAAGAGTTTGAGCTTTGCTGGTTGGAAGATGGATGATAATTCCACTGCTCGCCTTATTCGCCATGCCTACAGTCTTCGGGAGCTCGACATGTAATCTCTGTCTCTCTTGAAATTTCAGTGAAATTTTCATCAGTTTGCTTTTCTTCGAGTAGTTTCTGATTGCAGATAGTTACTGGTGTTGTGTGTTGTGAGATGAAACTAGTTTTTTGAATTCGCTAATCGATTCAATTGGCTTCGCTTTCCGATTACGAACCACAAAAACAGAGGTTTATCTTGAGATTGTGAGGTTGTTTGGGAATAATCTAGGGAGAAGGTTCTTTGAAATTGTGTTTGTAAATCTGGTGTTAAATTATTGATGTTTATGGTTCGTGTTCTTCAGCTCAAGGAGCCGTTGGGGTTGCCAAATAACAGACCATGGATTATATGAAATCTCTCTTGCAAAGTGCATTCCCAACCTCAAGTCCATTTCGCTTTGGGGTATGGCAGGGATCACCGACAAGGGTGTTGTGCAACTGGTATGAATTTAATATTATCTTATCTTAGAACAAACATTTCTAAAGAAATAGACCTTGATTTGTTATTGGAGAATGAGTTTAGATGGGATTTGAACTATTGGATTTCTCTAAATTGTTCATCATCTAGAATATATGTCGTTCGTAGTTTTGGATATTCTAGAGTCCATCCATAAGTAAACACCGGTTAGAGAAATTCTCTTTGTCCTGAAATTTTATGTTCTTTACAGGACTTTAGGACTTTAGGAGGAAGTTTTTGGCAACATTTTCTTGTTCTCTCTACTTCAGAAATTTTGGAAATGCATGATTTTTGGAAGTAAGGTTCCACTTGTTCTTAGAAATAAATCTTCATAAGAGAAAAAACAAGAAACTACTTTCAAAAAATGGTACTTCATAGGCGGAAATTAACTTGCCCAAATTATGTGTTCTCAATCAAAATGTTAGAGACCCAAATTCCTAAAGTCATCATGAGGTTGTCTTAAAAGGTATAATCCATATTGCCACATACCTAGAATTTAATATTTTACAAGTTTTCTTGACAATCGAATGTTATAGGTTCAAACAAACTCTCTCGAATGATTAGTTGAAGTTTGCATTTGTGGTTATAAAACAATAAGAAAAAAAAATCCAAATCCCTCCACCCACATATAAAAAATTTGTATTCCACATGTGCTTTCACTTTACTTTTGTTCCAAAATACATACTTTTTTCCACATTTCAATATCTTACGTAGTTTACTAACATATGACTTCCTTCTCCTAAAACTATATTTGCTTGTCTTCCCAGATTTCCAGAGCCAACTCTTTACAAAACTTGAATATTGGTGGAACCTTTGTCACAGACGTATCTCTATATGCAATTGCAGATAGCTGCCCAAATTTGAAGGTTATTATTCTAAGCATCTCCTTCACTCCCTATACAATAATACCTACATGTGTTGCACACAATCTTTAACCAAGTCCATATCTTTATTAATCCTGCAGACCATTGTCCTTTGGAGCTGTCGCCATGTAACAGAGACCGGACTTCTTATTCTTGTAAGTAAATGCCGAAAACTCGAGTCGATAAATGTTTGGGGAATGAGGGTTCCTGTAGACTGCTTCATTGGTTTGGTTGCGATAAGTCCATCCCTTCAAATAAAATCAAGAAGTCTGCTTAATTCTATGTGGCCTGTTGTGTGAAAATATGCTATTAAAATATTCTTCATATGTCCTGTAAAGCTTCTATTGTATGTATATGTCTTCATCTTTGTGTTTTTCTTCATCAAAAGTAAAATATTAGATTTGTTATCATTCCCCCAATAAAGCTGATTGTGTTACGTTCAGATCATTTAAAACTAAATTATACTCTCTTCTAGTGTAAATATAATTGTATGTAAAAACTAAGCTCGCATATTTTCGAGCTAAATGTGTTTATATTCAGATTGTCCCATAATTACATATCTTTGGGACCTAAGAATCAAGATTCTTCTAATAGTTTCCATTTGTTATCCAAATTAGATATATAGTAAAATTTAAGTAAGGGAGTGTTTGGGACTAGTTTGCATTTGTGAGAGAGATTATTTTAGCTTGAATTATAATAATGTATTTGTGGTGAAAACT CCATTATGGAGGTTTCCTAAATTCATGAAAATACCCAACAAAATGTACGTTCGTATCATATAATTTGGATATGTTTGGAGCTCAGATTCTTGAAATGGTGGCGAAATCATGTCAACATCTTCTCTCTTTCTCTCTCTTCTTTGAATCTTCCGTTTCCTTTTTTATGCTTATCTTTTGCCAAAAGTAACGAATTCAACTCGTGAATTTCCTCGTTTTTCAACGCCGCAAACTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCAAATTGATATACGGCTACAATGGATTCGGATGTTGTGTGGTCGGTAGAGATGGAGTTGGAACCGGAGATTGATCGATTGCCGATTGACCTATTGGCTCATATTTTTGCTATGATCACCTCCTTCACCGATTTGGCTCAGTAATTCATTTTCAATTTCGGCTTTGTTGAATTTTTTTTCTTCAATTGCTATTTTTATTTCCCCCTAAATTTGAGGGTTTATGCGATTGTGGAAAAACGCAGGGCGTGCGGCGTATGTAGAAAATGGAAGGAAGGAGTTAAATTGTCTCTCGGTAGGAGGAAGAGTTTGAGCTTTGCTGGTTGGAAGATGGATGATAATTCCACTGCTCGCCTTATTCGCCATGCCTACAGTCTTCGGGAGCTCGACATCTCAAGGAGCCGTTGGGGTTGCCAAATAACAGACCATGGATTATATGAAATCTCTCTTGCAAAGTGCATTCCCAACCTCAAGTCCATTTCGCTTTGGGGTATGGCAGGGATCACCGACAAGGGTGTTGTGCAACTGATTTCCAGAGCCAACTCTTTACAAAACTTGAATATTGGTGGAACCTTTGTCACAGACGTATCTCTATATGCAATTGCAGATAGCTGCCCAAATTTGAAGACCATTGTCCTTTGGAGCTGTCGCCATGTAACAGAGACCGGACTTCTTATTCTTGTAAGTAAATGCCGAAAACTCGAGTCGATAAATGTTTGGGGAATGAGGGTTCCTGTAGACTGCTTCATTGGTTTGGTTGCGATAAGTCCATCCCTTCAAATAAAATCAAGAAGTCTGCTTAATTCTATGTGGCCTGTTGTGTGAAAATATGCTATTAAAATATTCTTCATATGTCCTGTAAAGCTTCTATTGTATGTATATGTCTTCATCTTTGTGTTTTTCTTCATCAAAAGTAAAATATTAGATTTGTTATCATTCCCCCAATAAAGCTGATTGTGTTACGTTCAGATCATTTAAAACTAAATTATACTCTCTTCTAGTGTAAATATAATTGTATGTAAAAACTAAGCTCGCATATTTTCGAGCTAAATGTGTTTATATTCAGATTGTCCCATAATTACATATCTTTGGGACCTAAGAATCAAGATTCTTCTAATAGTTTCCATTTGTTATCCAAATTAGATATATAGTAAAATTTAAGTAAGGGAGTGTTTGGGACTAGTTTGCATTTGTGAGAGAGATTATTTTAGCTTGAATTATAATAATGTATTTGTGGTGAAAACT ATGGATGATAATTCCACTGCTCGCCTTATTCGCCATGCCTACAGTCTTCGGGAGCTCGACATCTCAAGGAGCCGTTGGGGTTGCCAAATAACAGACCATGGATTATATGAAATCTCTCTTGCAAAGTGCATTCCCAACCTCAAGTCCATTTCGCTTTGGGGTATGGCAGGGATCACCGACAAGGGTGTTGTGCAACTGATTTCCAGAGCCAACTCTTTACAAAACTTGAATATTGGTGGAACCTTTGTCACAGACGTATCTCTATATGCAATTGCAGATAGCTGCCCAAATTTGAAGACCATTGTCCTTTGGAGCTGTCGCCATGTAACAGAGACCGGACTTCTTATTCTTGTAAGTAAATGCCGAAAACTCGAGTCGATAAATGTTTGGGGAATGAGGGTTCCTGTAGACTGCTTCATTGGTTTGGTTGCGATAAGTCCATCCCTTCAAATAAAATCAAGAAGTCTGCTTAATTCTATGTGGCCTGTTGTGTGA MDDNSTARLIRHAYSLRELDISRSRWGCQITDHGLYEISLAKCIPNLKSISLWGMAGITDKGVVQLISRANSLQNLNIGGTFVTDVSLYAIADSCPNLKTIVLWSCRHVTETGLLILVSKCRKLESINVWGMRVPVDCFIGLVAISPSLQIKSRSLLNSMWPVV Homology
BLAST of IVF0010229 vs. ExPASy Swiss-Prot
Match: Q9FH99 (F-box protein At5g67140 OS=Arabidopsis thaliana OX=3702 GN=At5g67140 PE=2 SV=1) HSP 1 Score: 240.0 bits (611), Expect = 1.9e-62 Identity = 111/157 (70.70%), Postives = 134/157 (85.35%), Query Frame = 0
BLAST of IVF0010229 vs. ExPASy Swiss-Prot
Match: Q9SKK0 (EIN3-binding F-box protein 1 OS=Arabidopsis thaliana OX=3702 GN=EBF1 PE=1 SV=1) HSP 1 Score: 72.8 bits (177), Expect = 4.1e-12 Identity = 36/102 (35.29%), Postives = 62/102 (60.78%), Query Frame = 0
BLAST of IVF0010229 vs. ExPASy Swiss-Prot
Match: O49286 (F-box protein SKP2B OS=Arabidopsis thaliana OX=3702 GN=SKP2B PE=1 SV=1) HSP 1 Score: 70.9 bits (172), Expect = 1.6e-11 Identity = 40/131 (30.53%), Postives = 74/131 (56.49%), Query Frame = 0
BLAST of IVF0010229 vs. ExPASy Swiss-Prot
Match: Q9LPL4 (F-box protein SKP2A OS=Arabidopsis thaliana OX=3702 GN=SKP2A PE=1 SV=1) HSP 1 Score: 70.1 bits (170), Expect = 2.7e-11 Identity = 40/133 (30.08%), Postives = 74/133 (55.64%), Query Frame = 0
BLAST of IVF0010229 vs. ExPASy Swiss-Prot
Match: Q8LB33 (F-box protein At3g58530 OS=Arabidopsis thaliana OX=3702 GN=At3g58530 PE=2 SV=1) HSP 1 Score: 63.9 bits (154), Expect = 1.9e-09 Identity = 33/107 (30.84%), Postives = 64/107 (59.81%), Query Frame = 0
BLAST of IVF0010229 vs. ExPASy TrEMBL
Match: A0A1S4E1P2 (F-box protein At5g67140 OS=Cucumis melo OX=3656 GN=LOC103497375 PE=4 SV=1) HSP 1 Score: 334.7 bits (857), Expect = 2.1e-88 Identity = 164/164 (100.00%), Postives = 164/164 (100.00%), Query Frame = 0
BLAST of IVF0010229 vs. ExPASy TrEMBL
Match: A0A5D3BMX7 (F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold123G00750 PE=4 SV=1) HSP 1 Score: 334.7 bits (857), Expect = 2.1e-88 Identity = 164/164 (100.00%), Postives = 164/164 (100.00%), Query Frame = 0
BLAST of IVF0010229 vs. ExPASy TrEMBL
Match: A0A0A0LPU5 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G279180 PE=4 SV=1) HSP 1 Score: 329.7 bits (844), Expect = 6.9e-87 Identity = 162/164 (98.78%), Postives = 162/164 (98.78%), Query Frame = 0
BLAST of IVF0010229 vs. ExPASy TrEMBL
Match: A0A6J1G699 (F-box protein At5g67140 OS=Cucurbita moschata OX=3662 GN=LOC111451179 PE=4 SV=1) HSP 1 Score: 315.5 bits (807), Expect = 1.3e-82 Identity = 156/165 (94.55%), Postives = 161/165 (97.58%), Query Frame = 0
BLAST of IVF0010229 vs. ExPASy TrEMBL
Match: A0A6J1KZ61 (F-box protein At5g67140 OS=Cucurbita maxima OX=3661 GN=LOC111499581 PE=4 SV=1) HSP 1 Score: 312.4 bits (799), Expect = 1.1e-81 Identity = 155/165 (93.94%), Postives = 160/165 (96.97%), Query Frame = 0
BLAST of IVF0010229 vs. NCBI nr
Match: XP_008457759.1 (PREDICTED: F-box protein At5g67140 [Cucumis melo] >XP_008457760.1 PREDICTED: F-box protein At5g67140 [Cucumis melo] >XP_016902142.1 PREDICTED: F-box protein At5g67140 [Cucumis melo] >XP_016902143.1 PREDICTED: F-box protein At5g67140 [Cucumis melo] >KAA0045774.1 F-box protein [Cucumis melo var. makuwa] >TYJ99508.1 F-box protein [Cucumis melo var. makuwa]) HSP 1 Score: 334 bits (857), Expect = 1.07e-114 Identity = 164/164 (100.00%), Postives = 164/164 (100.00%), Query Frame = 0
BLAST of IVF0010229 vs. NCBI nr
Match: XP_004149695.1 (F-box protein At5g67140 [Cucumis sativus] >KGN61981.1 hypothetical protein Csa_006050 [Cucumis sativus]) HSP 1 Score: 329 bits (844), Expect = 1.14e-112 Identity = 162/164 (98.78%), Postives = 162/164 (98.78%), Query Frame = 0
BLAST of IVF0010229 vs. NCBI nr
Match: XP_038902095.1 (F-box protein At5g67140-like [Benincasa hispida]) HSP 1 Score: 328 bits (840), Expect = 4.80e-112 Identity = 159/164 (96.95%), Postives = 164/164 (100.00%), Query Frame = 0
BLAST of IVF0010229 vs. NCBI nr
Match: XP_022947259.1 (F-box protein At5g67140 [Cucurbita moschata]) HSP 1 Score: 315 bits (807), Expect = 4.60e-107 Identity = 156/165 (94.55%), Postives = 161/165 (97.58%), Query Frame = 0
BLAST of IVF0010229 vs. NCBI nr
Match: XP_023533904.1 (F-box protein At5g67140 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 315 bits (807), Expect = 4.60e-107 Identity = 156/165 (94.55%), Postives = 161/165 (97.58%), Query Frame = 0
BLAST of IVF0010229 vs. TAIR 10
Match: AT5G67140.1 (F-box/RNI-like superfamily protein ) HSP 1 Score: 240.0 bits (611), Expect = 1.4e-63 Identity = 111/157 (70.70%), Postives = 134/157 (85.35%), Query Frame = 0
BLAST of IVF0010229 vs. TAIR 10
Match: AT2G25490.1 (EIN3-binding F box protein 1 ) HSP 1 Score: 72.8 bits (177), Expect = 2.9e-13 Identity = 36/102 (35.29%), Postives = 62/102 (60.78%), Query Frame = 0
BLAST of IVF0010229 vs. TAIR 10
Match: AT1G77000.1 (RNI-like superfamily protein ) HSP 1 Score: 70.9 bits (172), Expect = 1.1e-12 Identity = 40/131 (30.53%), Postives = 74/131 (56.49%), Query Frame = 0
BLAST of IVF0010229 vs. TAIR 10
Match: AT1G77000.2 (RNI-like superfamily protein ) HSP 1 Score: 70.9 bits (172), Expect = 1.1e-12 Identity = 40/131 (30.53%), Postives = 74/131 (56.49%), Query Frame = 0
BLAST of IVF0010229 vs. TAIR 10
Match: AT1G21410.1 (F-box/RNI-like superfamily protein ) HSP 1 Score: 70.1 bits (170), Expect = 1.9e-12 Identity = 40/133 (30.08%), Postives = 74/133 (55.64%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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