IVF0008365.2 (mRNA) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CAAAATTCAATTTCTAAATTGAGAGGAGGATATAGTAAATTCACACGCATTATCCCTTCGAGTTTCATCATCTCACCCATTCTTGCATACAGTGCAGTTACAATTCCTTCATTCTGGATAGACAATGGCTACTTCTATATCCTCTCTTGCATTTTCTCTTTCTTCTCTCTCCTTTTCTTCCCAAGTCTCACACAAGCCAACTGCCCTCTCCTTTCCCCGTTCAAAGTCTCTTCTAATTTCCCCTTCCTCCTCTACTTCCCCACTTCTCGTATCTGCCTCCGCCGCTGCCGCTGTCGAGACCGCCGACCTTAAGAGTTTCGTCAAATCCAGCCTCCCTGGTGGTTTTGCCGCTCAAACGCTTATTGGTACTGGTCGTCGCAAATCTGCCGTAGCTCGTGTTGTCCTTCGAGAAGGCACTGGCAAAGTTATTATCAATTACCGCGACGCTAAGGTTCTCTAGCTTTTCCTTTCTTCGCCTACTTTCCTTTATTTTAATTCATTTTCACCCCTCCAAATTTTTGGTACTGGATGTTCTTTCGATGATTTAGGGTTTTTGTTCCTTTTGCTGAATTCGACTAGGTTCGTTTGATGGCAATGCAAATGTTTTTTTTTATTAAACCAACAATCGTTATTATATGTTCCTGATTACCCTCTTCTATATGCGATGGAACTGATTCTTTTCTTTGATCTTTCCCCACCGACTCTGTTATCGATCTGCGACGTTTATTATGTTGAATTGGAAATGAACTTGAGAATAACATTCTTTACATTCTAGAATTAAATTCTAAGGCTATTGTTTCTTCATCTAATACGGTGAATTTATATCATAGGATTCCATCGGTTGGTGCTAAATTGGATAAAGGACTGATGCGACTGTATCTATATATCTAGTGTTTCTTGTAAGTTTGAGTTTGAGCTTCCAGTGAAATGGTTCATAATGCCAAAACGCATATCTATTTCGGGGATTGAGTAGCTCCCTTTCTTTCTAAGTGGGTGTGGGAGGGAAAATGTGCCATTGTTCTTCCACTTACATCACATATGGAAATCTTTAACATCTGAGAACATTAGGTCACGTTGCAAATCCTTGGGTTGCCATTTGCCAGTGTTCATTTGTCGTAGTGTTTCTGGAGATAGCAACCATAATCTTACGACCTTACTTAAACAAGATCTGTTTTGTTGGTTGTACAACTCTCTCCTTTAAGTTCTAAAGAGATGAAAATCATAGTATCAAGTCTTGTACGGGTGTAACCAATGCCTACATTTGTTCCTTAATATGTTAAAGATGTTTGTTTCACCTTTAAATAAGTTAACTTAGTACAATTTTTCTTTCTTTCTTCCGATGAGAGGGAGTGGCGGGATTTGAACCTCAAAGCTTTTGTTCAAGTGTATATGTCTTTCAAGATTTGCTCATATTGAAGAAACGTGTTACGTTTCTTGTTAGGATGCCACTTTCCCTTACATGTTTATAAGGTTTTTCTTTTGTTGTGTACAATAAGTGGAGTTATGAAAATTTATTACCGGGCAGATCAGGTTTTTCTAGTATTGATGCTTGAATGACTTCTTCTAAATTCTATTTGGAGTTGAGTAGACGATTCACAATTTGTACTGAGGTTGTAGCTCTTTTATTTATTTAAGACAACTTGTTATGACAACCAATTGGTTTTGTATGAAGTATTTAAGCCGTTACTCACCTCTACATTGGAATACACAATTTGTTGCAGGAATATCTTCAAGGAAATCCATTGTGGCTTCAATATGTGAAAGTTCCTTTAGTAACATTAGGATATGAAAGTAGCTACGATGTATTCGTGAAAGCGGAAGGAGGCGGGCTGTCTGGCCAGGCTCAGGCAATTTCCCTTGGCATTGCTCGTGCTCTGCTAAAGGTGAGTGATGATCACAGATCACCTCTAAAGAAAGAGGGGCTTTTGACAAGAGACTCCAGAGTTGTGGAGAGAAAGAAGGCTGGTCTCAAGAAAGCTCGTAAAGCCCCACAATTCTCCAAGCGTTGAGGTTCAATTTTTCCTCTTCAATTGTTTTACGTTCCCTCGTTTCCTACTTTATTTGTACAACCCAGATGTTTTCTTCTACTTTTCTTTCTCTCTCTAATGTAGTGTCATTCCAACATTTCTCCATATTAAAAAAAAGTCAACCCACAATTGATCATTGTAATTCTTTTAAAATAAACATGTCCTCGTTGGAATAGCCCTCGTGAACAAGCAC CAAAATTCAATTTCTAAATTGAGAGGAGGATATAGTAAATTCACACGCATTATCCCTTCGAGTTTCATCATCTCACCCATTCTTGCATACAGTGCAGTTACAATTCCTTCATTCTGGATAGACAATGGCTACTTCTATATCCTCTCTTGCATTTTCTCTTTCTTCTCTCTCCTTTTCTTCCCAAGTCTCACACAAGCCAACTGCCCTCTCCTTTCCCCGTTCAAAGTCTCTTCTAATTTCCCCTTCCTCCTCTACTTCCCCACTTCTCGTATCTGCCTCCGCCGCTGCCGCTGTCGAGACCGCCGACCTTAAGAGTTTCGTCAAATCCAGCCTCCCTGGTGGTTTTGCCGCTCAAACGCTTATTGGTACTGGTCGTCGCAAATCTGCCGTAGCTCGTGTTGTCCTTCGAGAAGGCACTGGCAAAGTTATTATCAATTACCGCGACGCTAAGGAATATCTTCAAGGAAATCCATTGTGGCTTCAATATGTGAAAGTTCCTTTAGTAACATTAGGATATGAAAGTAGCTACGATGTATTCGTGAAAGCGGAAGGAGGCGGGCTGTCTGGCCAGGCTCAGGCAATTTCCCTTGGCATTGCTCGTGCTCTGCTAAAGGTGAGTGATGATCACAGATCACCTCTAAAGAAAGAGGGGCTTTTGACAAGAGACTCCAGAGTTGTGGAGAGAAAGAAGGCTGGTCTCAAGAAAGCTCGTAAAGCCCCACAATTCTCCAAGCGTTGAGGTTCAATTTTTCCTCTTCAATTGTTTTACGTTCCCTCGTTTCCTACTTTATTTGTACAACCCAGATGTTTTCTTCTACTTTTCTTTCTCTCTCTAATGTAGTGTCATTCCAACATTTCTCCATATTAAAAAAAAGTCAACCCACAATTGATCATTGTAATTCTTTTAAAATAAACATGTCCTCGTTGGAATAGCCCTCGTGAACAAGCAC ATGGCTACTTCTATATCCTCTCTTGCATTTTCTCTTTCTTCTCTCTCCTTTTCTTCCCAAGTCTCACACAAGCCAACTGCCCTCTCCTTTCCCCGTTCAAAGTCTCTTCTAATTTCCCCTTCCTCCTCTACTTCCCCACTTCTCGTATCTGCCTCCGCCGCTGCCGCTGTCGAGACCGCCGACCTTAAGAGTTTCGTCAAATCCAGCCTCCCTGGTGGTTTTGCCGCTCAAACGCTTATTGGTACTGGTCGTCGCAAATCTGCCGTAGCTCGTGTTGTCCTTCGAGAAGGCACTGGCAAAGTTATTATCAATTACCGCGACGCTAAGGAATATCTTCAAGGAAATCCATTGTGGCTTCAATATGTGAAAGTTCCTTTAGTAACATTAGGATATGAAAGTAGCTACGATGTATTCGTGAAAGCGGAAGGAGGCGGGCTGTCTGGCCAGGCTCAGGCAATTTCCCTTGGCATTGCTCGTGCTCTGCTAAAGGTGAGTGATGATCACAGATCACCTCTAAAGAAAGAGGGGCTTTTGACAAGAGACTCCAGAGTTGTGGAGAGAAAGAAGGCTGGTCTCAAGAAAGCTCGTAAAGCCCCACAATTCTCCAAGCGTTGA MATSISSLAFSLSSLSFSSQVSHKPTALSFPRSKSLLISPSSSTSPLLVSASAAAAVETADLKSFVKSSLPGGFAAQTLIGTGRRKSAVARVVLREGTGKVIINYRDAKEYLQGNPLWLQYVKVPLVTLGYESSYDVFVKAEGGGLSGQAQAISLGIARALLKVSDDHRSPLKKEGLLTRDSRVVERKKAGLKKARKAPQFSKR Homology
BLAST of IVF0008365.2 vs. ExPASy Swiss-Prot
Match: Q9XJ27 (30S ribosomal protein S9, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPS9 PE=2 SV=1) HSP 1 Score: 282.0 bits (720), Expect = 5.5e-75 Identity = 155/206 (75.24%), Postives = 175/206 (84.95%), Query Frame = 0
BLAST of IVF0008365.2 vs. ExPASy Swiss-Prot
Match: P82278 (30S ribosomal protein S9, chloroplastic OS=Spinacia oleracea OX=3562 GN=PRPS9 PE=1 SV=2) HSP 1 Score: 273.9 bits (699), Expect = 1.5e-72 Identity = 151/208 (72.60%), Postives = 173/208 (83.17%), Query Frame = 0
BLAST of IVF0008365.2 vs. ExPASy Swiss-Prot
Match: Q8DMK7 (30S ribosomal protein S9 OS=Thermosynechococcus elongatus (strain BP-1) OX=197221 GN=rpsI PE=3 SV=1) HSP 1 Score: 151.8 bits (382), Expect = 8.6e-36 Identity = 79/125 (63.20%), Postives = 98/125 (78.40%), Query Frame = 0
BLAST of IVF0008365.2 vs. ExPASy Swiss-Prot
Match: Q9MUV1 (30S ribosomal protein S9, chloroplastic OS=Mesostigma viride OX=41882 GN=rps9 PE=3 SV=1) HSP 1 Score: 151.0 bits (380), Expect = 1.5e-35 Identity = 83/125 (66.40%), Postives = 94/125 (75.20%), Query Frame = 0
BLAST of IVF0008365.2 vs. ExPASy Swiss-Prot
Match: B2ITM7 (30S ribosomal protein S9 OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) OX=63737 GN=rpsI PE=3 SV=1) HSP 1 Score: 146.7 bits (369), Expect = 2.8e-34 Identity = 76/124 (61.29%), Postives = 93/124 (75.00%), Query Frame = 0
BLAST of IVF0008365.2 vs. ExPASy TrEMBL
Match: A0A5A7UBW5 (30S ribosomal protein S9 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold234G00010 PE=3 SV=1) HSP 1 Score: 367.5 bits (942), Expect = 3.7e-98 Identity = 204/204 (100.00%), Postives = 204/204 (100.00%), Query Frame = 0
BLAST of IVF0008365.2 vs. ExPASy TrEMBL
Match: A0A1S3CRR0 (30S ribosomal protein S9, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103503984 PE=3 SV=1) HSP 1 Score: 367.5 bits (942), Expect = 3.7e-98 Identity = 204/204 (100.00%), Postives = 204/204 (100.00%), Query Frame = 0
BLAST of IVF0008365.2 vs. ExPASy TrEMBL
Match: A0A0A0LDS0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G854240 PE=3 SV=1) HSP 1 Score: 353.2 bits (905), Expect = 7.2e-94 Identity = 194/204 (95.10%), Postives = 201/204 (98.53%), Query Frame = 0
BLAST of IVF0008365.2 vs. ExPASy TrEMBL
Match: A0A6J1CNY0 (30S ribosomal protein S9, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111013001 PE=3 SV=1) HSP 1 Score: 335.1 bits (858), Expect = 2.0e-88 Identity = 183/204 (89.71%), Postives = 195/204 (95.59%), Query Frame = 0
BLAST of IVF0008365.2 vs. ExPASy TrEMBL
Match: A0A6J1J3K2 (30S ribosomal protein S9, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111481030 PE=3 SV=1) HSP 1 Score: 333.6 bits (854), Expect = 5.9e-88 Identity = 185/204 (90.69%), Postives = 194/204 (95.10%), Query Frame = 0
BLAST of IVF0008365.2 vs. NCBI nr
Match: XP_008466625.1 (PREDICTED: 30S ribosomal protein S9, chloroplastic [Cucumis melo] >KAA0051696.1 30S ribosomal protein S9 [Cucumis melo var. makuwa] >TYJ97914.1 30S ribosomal protein S9 [Cucumis melo var. makuwa]) HSP 1 Score: 367 bits (942), Expect = 2.27e-127 Identity = 204/204 (100.00%), Postives = 204/204 (100.00%), Query Frame = 0
BLAST of IVF0008365.2 vs. NCBI nr
Match: XP_038903352.1 (30S ribosomal protein S9, chloroplastic [Benincasa hispida]) HSP 1 Score: 353 bits (905), Expect = 9.89e-122 Identity = 195/204 (95.59%), Postives = 200/204 (98.04%), Query Frame = 0
BLAST of IVF0008365.2 vs. NCBI nr
Match: XP_004147796.1 (30S ribosomal protein S9, chloroplastic [Cucumis sativus] >KGN59928.1 hypothetical protein Csa_002564 [Cucumis sativus]) HSP 1 Score: 353 bits (905), Expect = 9.89e-122 Identity = 194/204 (95.10%), Postives = 201/204 (98.53%), Query Frame = 0
BLAST of IVF0008365.2 vs. NCBI nr
Match: XP_022143016.1 (30S ribosomal protein S9, chloroplastic [Momordica charantia]) HSP 1 Score: 335 bits (858), Expect = 1.44e-114 Identity = 183/204 (89.71%), Postives = 195/204 (95.59%), Query Frame = 0
BLAST of IVF0008365.2 vs. NCBI nr
Match: XP_022982074.1 (30S ribosomal protein S9, chloroplastic [Cucurbita maxima]) HSP 1 Score: 333 bits (854), Expect = 5.84e-114 Identity = 185/204 (90.69%), Postives = 194/204 (95.10%), Query Frame = 0
BLAST of IVF0008365.2 vs. TAIR 10
Match: AT1G74970.1 (ribosomal protein S9 ) HSP 1 Score: 282.0 bits (720), Expect = 3.9e-76 Identity = 155/206 (75.24%), Postives = 175/206 (84.95%), Query Frame = 0
BLAST of IVF0008365.2 vs. TAIR 10
Match: AT3G49080.1 (Ribosomal protein S5 domain 2-like superfamily protein ) HSP 1 Score: 84.3 bits (207), Expect = 1.2e-16 Identity = 54/124 (43.55%), Postives = 72/124 (58.06%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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