IVF0008365 (gene) Melon (IVF77) v1

Overview


Name	IVF0008365
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	30S ribosomal protein S9
Location	chr04: 5968827 .. 5971046 (+)
RNA-Seq Expression	IVF0008365
Synteny	IVF0008365

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAAATTCAATTTCTAAATTGAGAGGAGGATATAGTAAATTCACACGCATTATCCCTTCGAGTTTCATCATCTCACCCATTCTTGCATACAGTGCAGTTACAATTCCTTCATTCTGGATAGACAATGGCTACTTCTATATCCTCTCTTGCATTTTCTCTTTCTTCTCTCTCCTTTTCTTCCCAAGTCTCACACAAGCCAACTGCCCTCTCCTTTCCCCGTTCAAAGTCTCTTCTAATTTCCCCTTCCTCCTCTACTTCCCCACTTCTCGTATCTGCCTCCGCCGCTGCCGCTGTCGAGACCGCCGACCTTAAGAGTTTCGTCAAATCCAGCCTCCCTGGTGGTTTTGCCGCTCAAACGCTTATTGGTACTGGTCGTCGCAAATCTGCCGTAGCTCGTGTTGTCCTTCGAGAAGGCACTGGCAAAGTTATTATCAATTACCGCGACGCTAAGGTTCTCTAGCTTTTCCTTTCTTCGCCTACTTTCCTTTATTTTAATTCATTTTCACCCCTCCAAATTTTTGGTACTGGATGTTCTTTCGATGATTTAGGGTTTTTGTTCCTTTTGCTGAATTCGACTAGGTTCGTTTGATGGCAATGCAAATGTTTTTTTTTATTAAACCAACAATCGTTATTATATGTTCCTGATTACCCTCTTCTATATGCGATGGAACTGATTCTTTTCTTTGATCTTTCCCCACCGACTCTGTTATCGATCTGCGACGTTTATTATGTTGAATTGGAAATGAACTTGAGAATAACATTCTTTACATTCTAGAATTAAATTCTAAGGCTATTGTTTCTTCATCTAATACGGTGAATTTATATCATAGGATTCCATCGGTTGGTGCTAAATTGGATAAAGGACTGATGCGACTGTATCTATATATCTAGTGTTTCTTGTAAGTTTGAGTTTGAGCTTCCAGTGAAATGGTTCATAATGCCAAAACGCATATCTATTTCGGGGATTGAGTAGCTCCCTTTCTTTCTAAGTGGGTGTGGGAGGGAAAATGTGCCATTGTTCTTCCACTTACATCACATATGGAAATCTTTAACATCTGAGAACATTAGGTCACGTTGCAAATCCTTGGGTTGCCATTTGCCAGTGTTCATTTGTCGTAGTGTTTCTGGAGATAGCAACCATAATCTTACGACCTTACTTAAACAAGATCTGTTTTGTTGGTTGTACAACTCTCTCCTTTAAGTTCTAAAGAGATGAAAATCATAGTATCAAGTCTTGTACGGGTGTAACCAATGCCTACATTTGTTCCTTAATATGTTAAAGATGTTTGTTTCACCTTTAAATAAGTTAACTTAGTACAATTTTTCTTTCTTTCTTCCGATGAGAGGGAGTGGCGGGATTTGAACCTCAAAGCTTTTGTTCAAGTGTATATGTCTTTCAAGATTTGCTCATATTGAAGAAACGTGTTACGTTTCTTGTTAGGATGCCACTTTCCCTTACATGTTTATAAGGTTTTTCTTTTGTTGTGTACAATAAGTGGAGTTATGAAAATTTATTACCGGGCAGATCAGGTTTTTCTAGTATTGATGCTTGAATGACTTCTTCTAAATTCTATTTGGAGTTGAGTAGACGATTCACAATTTGTACTGAGGTTGTAGCTCTTTTATTTATTTAAGACAACTTGTTATGACAACCAATTGGTTTTGTATGAAGTATTTAAGCCGTTACTCACCTCTACATTGGAATACACAATTTGTTGCAGGAATATCTTCAAGGAAATCCATTGTGGCTTCAATATGTGAAAGTTCCTTTAGTAACATTAGGATATGAAAGTAGCTACGATGTATTCGTGAAAGCGGAAGGAGGCGGGCTGTCTGGCCAGGCTCAGGCAATTTCCCTTGGCATTGCTCGTGCTCTGCTAAAGGTGAGTGATGATCACAGATCACCTCTAAAGAAAGAGGGGCTTTTGACAAGAGACTCCAGAGTTGTGGAGAGAAAGAAGGCTGGTCTCAAGAAAGCTCGTAAAGCCCCACAATTCTCCAAGCGTTGAGGTTCAATTTTTCCTCTTCAATTGTTTTACGTTCCCTCGTTTCCTACTTTATTTGTACAACCCAGATGTTTTCTTCTACTTTTCTTTCTCTCTCTAATGTAGTGTCATTCCAACATTTCTCCATATTAAAAAAAAGTCAACCCACAATTGATCATTGTAATTCTTTTAAAATAAACATGTCCTCGTTGGAATAGCCCTCGTGAACAAGCAC

mRNA sequence

CAAAATTCAATTTCTAAATTGAGAGGAGGATATAGTAAATTCACACGCATTATCCCTTCGAGTTTCATCATCTCACCCATTCTTGCATACAGTGCAGTTACAATTCCTTCATTCTGGATAGACAATGGCTACTTCTATATCCTCTCTTGCATTTTCTCTTTCTTCTCTCTCCTTTTCTTCCCAAGTCTCACACAAGCCAACTGCCCTCTCCTTTCCCCGTTCAAAGTCTCTTCTAATTTCCCCTTCCTCCTCTACTTCCCCACTTCTCGTATCTGCCTCCGCCGCTGCCGCTGTCGAGACCGCCGACCTTAAGAGTTTCGTCAAATCCAGCCTCCCTGGTGGTTTTGCCGCTCAAACGCTTATTGGTACTGGTCGTCGCAAATCTGCCGTAGCTCGTGTTGTCCTTCGAGAAGGCACTGGCAAAGTTATTATCAATTACCGCGACGCTAAGGAATATCTTCAAGGAAATCCATTGTGGCTTCAATATGTGAAAGTTCCTTTAGTAACATTAGGATATGAAAGTAGCTACGATGTATTCGTGAAAGCGGAAGGAGGCGGGCTGTCTGGCCAGGCTCAGGCAATTTCCCTTGGCATTGCTCGTGCTCTGCTAAAGGTGAGTGATGATCACAGATCACCTCTAAAGAAAGAGGGGCTTTTGACAAGAGACTCCAGAGTTGTGGAGAGAAAGAAGGCTGGTCTCAAGAAAGCTCGTAAAGCCCCACAATTCTCCAAGCGTTGAGGTTCAATTTTTCCTCTTCAATTGTTTTACGTTCCCTCGTTTCCTACTTTATTTGTACAACCCAGATGTTTTCTTCTACTTTTCTTTCTCTCTCTAATGTAGTGTCATTCCAACATTTCTCCATATTAAAAAAAAGTCAACCCACAATTGATCATTGTAATTCTTTTAAAATAAACATGTCCTCGTTGGAATAGCCCTCGTGAACAAGCAC

Coding sequence (CDS)

ATGGCTACTTCTATATCCTCTCTTGCATTTTCTCTTTCTTCTCTCTCCTTTTCTTCCCAAGTCTCACACAAGCCAACTGCCCTCTCCTTTCCCCGTTCAAAGTCTCTTCTAATTTCCCCTTCCTCCTCTACTTCCCCACTTCTCGTATCTGCCTCCGCCGCTGCCGCTGTCGAGACCGCCGACCTTAAGAGTTTCGTCAAATCCAGCCTCCCTGGTGGTTTTGCCGCTCAAACGCTTATTGGTACTGGTCGTCGCAAATCTGCCGTAGCTCGTGTTGTCCTTCGAGAAGGCACTGGCAAAGTTATTATCAATTACCGCGACGCTAAGGAATATCTTCAAGGAAATCCATTGTGGCTTCAATATGTGAAAGTTCCTTTAGTAACATTAGGATATGAAAGTAGCTACGATGTATTCGTGAAAGCGGAAGGAGGCGGGCTGTCTGGCCAGGCTCAGGCAATTTCCCTTGGCATTGCTCGTGCTCTGCTAAAGGTGAGTGATGATCACAGATCACCTCTAAAGAAAGAGGGGCTTTTGACAAGAGACTCCAGAGTTGTGGAGAGAAAGAAGGCTGGTCTCAAGAAAGCTCGTAAAGCCCCACAATTCTCCAAGCGTTGA

Protein sequence

MATSISSLAFSLSSLSFSSQVSHKPTALSFPRSKSLLISPSSSTSPLLVSASAAAAVETADLKSFVKSSLPGGFAAQTLIGTGRRKSAVARVVLREGTGKVIINYRDAKEYLQGNPLWLQYVKVPLVTLGYESSYDVFVKAEGGGLSGQAQAISLGIARALLKVSDDHRSPLKKEGLLTRDSRVVERKKAGLKKARKAPQFSKR

Homology

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BLAST of IVF0008365 vs. ExPASy Swiss-Prot
Match: Q9XJ27 (30S ribosomal protein S9, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPS9 PE=2 SV=1)

HSP 1 Score: 282.0 bits (720), Expect = 5.5e-75
Identity = 155/206 (75.24%), Postives = 175/206 (84.95%), Query Frame = 0


Query: 4   SISSLAFSLSSLSFSSQVSHKPTALSFPRSKSLLISPSSSTSPLLVSASAAAAV-----E 63
           SI++LA SLSSLSFSSQVS +P  +SFPR+ S+   P+ S     +S +A  +      E
Sbjct: 3   SITNLASSLSSLSFSSQVSQRPNTISFPRANSVFALPAKSARRASLSITATVSAPPEEEE 62

Query: 64  TADLKSFVKSSLPGGFAAQTLIGTGRRKSAVARVVLREGTGKVIINYRDAKEYLQGNPLW 123
             +LK +VKS LPGGFAAQ +IGTGRRK A+ARVVL+EGTGKVIINYRDAKEYLQGNPLW
Sbjct: 63  IVELKKYVKSRLPGGFAAQKIIGTGRRKCAIARVVLQEGTGKVIINYRDAKEYLQGNPLW 122

Query: 124 LQYVKVPLVTLGYESSYDVFVKAEGGGLSGQAQAISLGIARALLKVSDDHRSPLKKEGLL 183
           LQYVKVPLVTLGYE+SYD+FVKA GGGLSGQAQAI+LG+ARALLKVS DHRSPLKKEGLL
Sbjct: 123 LQYVKVPLVTLGYENSYDIFVKAHGGGLSGQAQAITLGVARALLKVSADHRSPLKKEGLL 182

Query: 184 TRDSRVVERKKAGLKKARKAPQFSKR 205
           TRD+RVVERKKAGLKKARKAPQFSKR
Sbjct: 183 TRDARVVERKKAGLKKARKAPQFSKR 208

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BLAST of IVF0008365 vs. ExPASy Swiss-Prot
Match: P82278 (30S ribosomal protein S9, chloroplastic OS=Spinacia oleracea OX=3562 GN=PRPS9 PE=1 SV=2)

HSP 1 Score: 273.9 bits (699), Expect = 1.5e-72
Identity = 151/208 (72.60%), Postives = 173/208 (83.17%), Query Frame = 0


Query: 1   MATSISSLAFSLSSLSFSSQVSHKPTALSFPRSKSLLISPSSSTSPLLVSASAAAA---- 60
           MA SISSL  S +SLSF+S ++ KP  L   R+K   +S  +   PL+++A++A A    
Sbjct: 1   MAVSISSLTSSFASLSFTSNLTPKPQTLPMARTKPFSLSNPAVVKPLVITATSATAPVEV 60

Query: 61  VETADLKSFVKSSLPGGFAAQTLIGTGRRKSAVARVVLREGTGKVIINYRDAKEYLQGNP 120
            ETADL+ FVKS LPGGFAAQT+IGTGRRK A+ARVVL+EGTGK IINYRDAKEYLQGNP
Sbjct: 61  AETADLEKFVKSRLPGGFAAQTVIGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNP 120

Query: 121 LWLQYVKVPLVTLGYESSYDVFVKAEGGGLSGQAQAISLGIARALLKVSDDHRSPLKKEG 180
           LWLQYVK PL TLGYE++YDVFVKA GGGLSGQAQAISLG+ARALLKVS  HR+PLK+EG
Sbjct: 121 LWLQYVKTPLATLGYETNYDVFVKAHGGGLSGQAQAISLGVARALLKVSASHRAPLKQEG 180

Query: 181 LLTRDSRVVERKKAGLKKARKAPQFSKR 205
           LLTRDSR+VERKK GLKKARKAPQFSKR
Sbjct: 181 LLTRDSRIVERKKPGLKKARKAPQFSKR 208

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BLAST of IVF0008365 vs. ExPASy Swiss-Prot
Match: Q8DMK7 (30S ribosomal protein S9 OS=Thermosynechococcus elongatus (strain BP-1) OX=197221 GN=rpsI PE=3 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 8.6e-36
Identity = 79/125 (63.20%), Postives = 98/125 (78.40%), Query Frame = 0


Query: 80  IGTGRRKSAVARVVLREGTGKVIINYRDAKEYLQGNPLWLQYVKVPLVTLGYESSYDVFV 139
           +GTGRRKSAVARV L  G+G++ IN R+  +YLQ NP++L  VK PL TLG E+SYD++V
Sbjct: 13  LGTGRRKSAVARVRLIPGSGQLWINGRNGADYLQNNPIYLNLVKAPLETLGLENSYDIYV 72

Query: 140 KAEGGGLSGQAQAISLGIARALLKVSDDHRSPLKKEGLLTRDSRVVERKKAGLKKARKAP 199
            A GGGL+GQA AI LGIARAL ++  ++R PLK EG LTRD R  ER+K GL+KARKAP
Sbjct: 73  NATGGGLTGQADAIRLGIARALCQLDIENRKPLKTEGYLTRDPRAKERRKYGLRKARKAP 132

Query: 200 QFSKR 205
           Q+SKR
Sbjct: 133 QYSKR 137

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BLAST of IVF0008365 vs. ExPASy Swiss-Prot
Match: Q9MUV1 (30S ribosomal protein S9, chloroplastic OS=Mesostigma viride OX=41882 GN=rps9 PE=3 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 1.5e-35
Identity = 83/125 (66.40%), Postives = 94/125 (75.20%), Query Frame = 0


Query: 80  IGTGRRKSAVARVVLREGTGKVIINYRDAKEYLQGNPLWLQYVKVPLVTLGYESSYDVFV 139
           +GTGRRKSAVARV L  G G+VIIN      YLQ N  +L  V+ PL TLG E +YD+ V
Sbjct: 13  LGTGRRKSAVARVRLVPGNGEVIINGLPGTNYLQFNGSYLSAVRSPLETLGLEDNYDIIV 72

Query: 140 KAEGGGLSGQAQAISLGIARALLKVSDDHRSPLKKEGLLTRDSRVVERKKAGLKKARKAP 199
           KA GGGL+GQA+AI LG+ARAL  +   +R PLKKEG LTRDSRV ERKK GLKKARKAP
Sbjct: 73  KAVGGGLTGQAEAIRLGVARALCTIDTSNRHPLKKEGFLTRDSRVKERKKYGLKKARKAP 132

Query: 200 QFSKR 205
           QFSKR
Sbjct: 133 QFSKR 137

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BLAST of IVF0008365 vs. ExPASy Swiss-Prot
Match: B2ITM7 (30S ribosomal protein S9 OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) OX=63737 GN=rpsI PE=3 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 2.8e-34
Identity = 76/124 (61.29%), Postives = 93/124 (75.00%), Query Frame = 0


Query: 81  GTGRRKSAVARVVLREGTGKVIINYRDAKEYLQGNPLWLQYVKVPLVTLGYESSYDVFVK 140
           GTGRRK+AVARV L  GTG++ +N +D   Y Q NP +L  +K PL TLG E+ YD+ VK
Sbjct: 15  GTGRRKNAVARVRLVPGTGQLTVNGKDGNLYFQFNPNYLGVIKAPLETLGLENEYDILVK 74

Query: 141 AEGGGLSGQAQAISLGIARALLKVSDDHRSPLKKEGLLTRDSRVVERKKAGLKKARKAPQ 200
           AEGGGL+GQA ++ LG+ARAL ++  D+R PLK EG LTRD R  ERKK GL KARKAPQ
Sbjct: 75  AEGGGLTGQADSVRLGVARALCQLDPDNRPPLKTEGYLTRDPRAKERKKYGLHKARKAPQ 134

Query: 201 FSKR 205
           +SKR
Sbjct: 135 YSKR 138

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BLAST of IVF0008365 vs. ExPASy TrEMBL
Match: A0A5A7UBW5 (30S ribosomal protein S9 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold234G00010 PE=3 SV=1)

HSP 1 Score: 367.5 bits (942), Expect = 3.7e-98
Identity = 204/204 (100.00%), Postives = 204/204 (100.00%), Query Frame = 0


Query: 1   MATSISSLAFSLSSLSFSSQVSHKPTALSFPRSKSLLISPSSSTSPLLVSASAAAAVETA 60
           MATSISSLAFSLSSLSFSSQVSHKPTALSFPRSKSLLISPSSSTSPLLVSASAAAAVETA
Sbjct: 1   MATSISSLAFSLSSLSFSSQVSHKPTALSFPRSKSLLISPSSSTSPLLVSASAAAAVETA 60

Query: 61  DLKSFVKSSLPGGFAAQTLIGTGRRKSAVARVVLREGTGKVIINYRDAKEYLQGNPLWLQ 120
           DLKSFVKSSLPGGFAAQTLIGTGRRKSAVARVVLREGTGKVIINYRDAKEYLQGNPLWLQ
Sbjct: 61  DLKSFVKSSLPGGFAAQTLIGTGRRKSAVARVVLREGTGKVIINYRDAKEYLQGNPLWLQ 120

Query: 121 YVKVPLVTLGYESSYDVFVKAEGGGLSGQAQAISLGIARALLKVSDDHRSPLKKEGLLTR 180
           YVKVPLVTLGYESSYDVFVKAEGGGLSGQAQAISLGIARALLKVSDDHRSPLKKEGLLTR
Sbjct: 121 YVKVPLVTLGYESSYDVFVKAEGGGLSGQAQAISLGIARALLKVSDDHRSPLKKEGLLTR 180

Query: 181 DSRVVERKKAGLKKARKAPQFSKR 205
           DSRVVERKKAGLKKARKAPQFSKR
Sbjct: 181 DSRVVERKKAGLKKARKAPQFSKR 204

[Close]

BLAST of IVF0008365 vs. ExPASy TrEMBL
Match: A0A1S3CRR0 (30S ribosomal protein S9, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103503984 PE=3 SV=1)

HSP 1 Score: 367.5 bits (942), Expect = 3.7e-98
Identity = 204/204 (100.00%), Postives = 204/204 (100.00%), Query Frame = 0


Query: 1   MATSISSLAFSLSSLSFSSQVSHKPTALSFPRSKSLLISPSSSTSPLLVSASAAAAVETA 60
           MATSISSLAFSLSSLSFSSQVSHKPTALSFPRSKSLLISPSSSTSPLLVSASAAAAVETA
Sbjct: 1   MATSISSLAFSLSSLSFSSQVSHKPTALSFPRSKSLLISPSSSTSPLLVSASAAAAVETA 60

Query: 61  DLKSFVKSSLPGGFAAQTLIGTGRRKSAVARVVLREGTGKVIINYRDAKEYLQGNPLWLQ 120
           DLKSFVKSSLPGGFAAQTLIGTGRRKSAVARVVLREGTGKVIINYRDAKEYLQGNPLWLQ
Sbjct: 61  DLKSFVKSSLPGGFAAQTLIGTGRRKSAVARVVLREGTGKVIINYRDAKEYLQGNPLWLQ 120

Query: 121 YVKVPLVTLGYESSYDVFVKAEGGGLSGQAQAISLGIARALLKVSDDHRSPLKKEGLLTR 180
           YVKVPLVTLGYESSYDVFVKAEGGGLSGQAQAISLGIARALLKVSDDHRSPLKKEGLLTR
Sbjct: 121 YVKVPLVTLGYESSYDVFVKAEGGGLSGQAQAISLGIARALLKVSDDHRSPLKKEGLLTR 180

Query: 181 DSRVVERKKAGLKKARKAPQFSKR 205
           DSRVVERKKAGLKKARKAPQFSKR
Sbjct: 181 DSRVVERKKAGLKKARKAPQFSKR 204

[Close]

BLAST of IVF0008365 vs. ExPASy TrEMBL
Match: A0A0A0LDS0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G854240 PE=3 SV=1)

HSP 1 Score: 353.2 bits (905), Expect = 7.2e-94
Identity = 194/204 (95.10%), Postives = 201/204 (98.53%), Query Frame = 0


Query: 1   MATSISSLAFSLSSLSFSSQVSHKPTALSFPRSKSLLISPSSSTSPLLVSASAAAAVETA 60
           MATSISSLAFSLSSLSFSSQVSHKP+ALSFPRSKSLLISPSSSTS L+V+ASAAA VETA
Sbjct: 1   MATSISSLAFSLSSLSFSSQVSHKPSALSFPRSKSLLISPSSSTSSLVVTASAAAVVETA 60

Query: 61  DLKSFVKSSLPGGFAAQTLIGTGRRKSAVARVVLREGTGKVIINYRDAKEYLQGNPLWLQ 120
           DLK+FVKSSLPGGFAAQTL GTGRRKSAVARVVLREGTGKVIINYR+AKEYLQGNPLWLQ
Sbjct: 61  DLKTFVKSSLPGGFAAQTLFGTGRRKSAVARVVLREGTGKVIINYREAKEYLQGNPLWLQ 120

Query: 121 YVKVPLVTLGYESSYDVFVKAEGGGLSGQAQAISLGIARALLKVSDDHRSPLKKEGLLTR 180
           YVK+PLVTLGYESSYDVFVKAEGGGLSGQAQAISLGIARALLKVSDDHRSPLKKEGLLTR
Sbjct: 121 YVKIPLVTLGYESSYDVFVKAEGGGLSGQAQAISLGIARALLKVSDDHRSPLKKEGLLTR 180

Query: 181 DSRVVERKKAGLKKARKAPQFSKR 205
           D+RVVERKKAGLKKARKAPQFSKR
Sbjct: 181 DARVVERKKAGLKKARKAPQFSKR 204

[Close]

BLAST of IVF0008365 vs. ExPASy TrEMBL
Match: A0A6J1CNY0 (30S ribosomal protein S9, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111013001 PE=3 SV=1)

HSP 1 Score: 335.1 bits (858), Expect = 2.0e-88
Identity = 183/204 (89.71%), Postives = 195/204 (95.59%), Query Frame = 0


Query: 1   MATSISSLAFSLSSLSFSSQVSHKPTALSFPRSKSLLISPSSSTSPLLVSASAAAAVETA 60
           MA+SISSLAFSLSSLSFSSQ+S KP  LSFPRSKSL+IS   ++SPL+VSASAA  VETA
Sbjct: 1   MASSISSLAFSLSSLSFSSQISQKPNGLSFPRSKSLVISHPCNSSPLVVSASAATGVETA 60

Query: 61  DLKSFVKSSLPGGFAAQTLIGTGRRKSAVARVVLREGTGKVIINYRDAKEYLQGNPLWLQ 120
           +L+SFVKS LPGGFAAQTLIGTGRRKSA+ARVV++EGTGKVIINYRDAKEYLQGNPLWLQ
Sbjct: 61  ELRSFVKSRLPGGFAAQTLIGTGRRKSAIARVVIQEGTGKVIINYRDAKEYLQGNPLWLQ 120

Query: 121 YVKVPLVTLGYESSYDVFVKAEGGGLSGQAQAISLGIARALLKVSDDHRSPLKKEGLLTR 180
           YVKVPLVTLGYESSYDVFVKAEGGGLSGQAQAISLGIARALLKVSDDHR+PLKKEGLLTR
Sbjct: 121 YVKVPLVTLGYESSYDVFVKAEGGGLSGQAQAISLGIARALLKVSDDHRAPLKKEGLLTR 180

Query: 181 DSRVVERKKAGLKKARKAPQFSKR 205
           DSRVVERKKAGLKKARKAPQFSKR
Sbjct: 181 DSRVVERKKAGLKKARKAPQFSKR 204

[Close]

BLAST of IVF0008365 vs. ExPASy TrEMBL
Match: A0A6J1J3K2 (30S ribosomal protein S9, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111481030 PE=3 SV=1)

HSP 1 Score: 333.6 bits (854), Expect = 5.9e-88
Identity = 185/204 (90.69%), Postives = 194/204 (95.10%), Query Frame = 0


Query: 1   MATSISSLAFSLSSLSFSSQVSHKPTALSFPRSKSLLISPSSSTSPLLVSASAAAAVETA 60
           MATS+SSLAFSLSSLSFSSQVS  P ALSFPRSKSL+IS S S SPL+VSASA +AVETA
Sbjct: 1   MATSVSSLAFSLSSLSFSSQVSQIPNALSFPRSKSLVISHSKSNSPLVVSASATSAVETA 60

Query: 61  DLKSFVKSSLPGGFAAQTLIGTGRRKSAVARVVLREGTGKVIINYRDAKEYLQGNPLWLQ 120
           +LK++VKS LPGGFAAQTLIGTGRRKSAVARVVL+EGTGKVIINYRDAKEYLQGNPLWLQ
Sbjct: 61  ELKNYVKSRLPGGFAAQTLIGTGRRKSAVARVVLQEGTGKVIINYRDAKEYLQGNPLWLQ 120

Query: 121 YVKVPLVTLGYESSYDVFVKAEGGGLSGQAQAISLGIARALLKVSDDHRSPLKKEGLLTR 180
           YVKVPL+TLGYESSYDVFVKAEGGGLSGQAQAISLGIARALLKVS DHR PLKKEGLLTR
Sbjct: 121 YVKVPLLTLGYESSYDVFVKAEGGGLSGQAQAISLGIARALLKVSADHRPPLKKEGLLTR 180

Query: 181 DSRVVERKKAGLKKARKAPQFSKR 205
           DSRVVERKKAGLKKARKAPQFSKR
Sbjct: 181 DSRVVERKKAGLKKARKAPQFSKR 204

[Close]

BLAST of IVF0008365 vs. NCBI nr
Match: XP_008466625.1 (PREDICTED: 30S ribosomal protein S9, chloroplastic [Cucumis melo] >KAA0051696.1 30S ribosomal protein S9 [Cucumis melo var. makuwa] >TYJ97914.1 30S ribosomal protein S9 [Cucumis melo var. makuwa])

HSP 1 Score: 367 bits (942), Expect = 2.27e-127
Identity = 204/204 (100.00%), Postives = 204/204 (100.00%), Query Frame = 0


Query: 1   MATSISSLAFSLSSLSFSSQVSHKPTALSFPRSKSLLISPSSSTSPLLVSASAAAAVETA 60
           MATSISSLAFSLSSLSFSSQVSHKPTALSFPRSKSLLISPSSSTSPLLVSASAAAAVETA
Sbjct: 1   MATSISSLAFSLSSLSFSSQVSHKPTALSFPRSKSLLISPSSSTSPLLVSASAAAAVETA 60

Query: 61  DLKSFVKSSLPGGFAAQTLIGTGRRKSAVARVVLREGTGKVIINYRDAKEYLQGNPLWLQ 120
           DLKSFVKSSLPGGFAAQTLIGTGRRKSAVARVVLREGTGKVIINYRDAKEYLQGNPLWLQ
Sbjct: 61  DLKSFVKSSLPGGFAAQTLIGTGRRKSAVARVVLREGTGKVIINYRDAKEYLQGNPLWLQ 120

Query: 121 YVKVPLVTLGYESSYDVFVKAEGGGLSGQAQAISLGIARALLKVSDDHRSPLKKEGLLTR 180
           YVKVPLVTLGYESSYDVFVKAEGGGLSGQAQAISLGIARALLKVSDDHRSPLKKEGLLTR
Sbjct: 121 YVKVPLVTLGYESSYDVFVKAEGGGLSGQAQAISLGIARALLKVSDDHRSPLKKEGLLTR 180

Query: 181 DSRVVERKKAGLKKARKAPQFSKR 204
           DSRVVERKKAGLKKARKAPQFSKR
Sbjct: 181 DSRVVERKKAGLKKARKAPQFSKR 204

[Close]

BLAST of IVF0008365 vs. NCBI nr
Match: XP_038903352.1 (30S ribosomal protein S9, chloroplastic [Benincasa hispida])

HSP 1 Score: 353 bits (905), Expect = 9.89e-122
Identity = 195/204 (95.59%), Postives = 200/204 (98.04%), Query Frame = 0


Query: 1   MATSISSLAFSLSSLSFSSQVSHKPTALSFPRSKSLLISPSSSTSPLLVSASAAAAVETA 60
           MATS+SSLAFSLSSLSFSSQVSHKP ALSFPRSKSL IS +SST+PL+VSASAAA VETA
Sbjct: 1   MATSVSSLAFSLSSLSFSSQVSHKPNALSFPRSKSLQISHASSTTPLVVSASAAAGVETA 60

Query: 61  DLKSFVKSSLPGGFAAQTLIGTGRRKSAVARVVLREGTGKVIINYRDAKEYLQGNPLWLQ 120
           DL+SFVKSSLPGGFAAQTLIGTGRRKSAVARVVLREGTGKVIINYRDAKEYLQGNPLWLQ
Sbjct: 61  DLRSFVKSSLPGGFAAQTLIGTGRRKSAVARVVLREGTGKVIINYRDAKEYLQGNPLWLQ 120

Query: 121 YVKVPLVTLGYESSYDVFVKAEGGGLSGQAQAISLGIARALLKVSDDHRSPLKKEGLLTR 180
           YVKVPLVTLGYESSYDVFVKAEGGGLSGQAQAISLGIARALLKVSDDHRSPLKKEGLLTR
Sbjct: 121 YVKVPLVTLGYESSYDVFVKAEGGGLSGQAQAISLGIARALLKVSDDHRSPLKKEGLLTR 180

Query: 181 DSRVVERKKAGLKKARKAPQFSKR 204
           DSRVVERKKAGLKKARKAPQFSKR
Sbjct: 181 DSRVVERKKAGLKKARKAPQFSKR 204

[Close]

BLAST of IVF0008365 vs. NCBI nr
Match: XP_004147796.1 (30S ribosomal protein S9, chloroplastic [Cucumis sativus] >KGN59928.1 hypothetical protein Csa_002564 [Cucumis sativus])

HSP 1 Score: 353 bits (905), Expect = 9.89e-122
Identity = 194/204 (95.10%), Postives = 201/204 (98.53%), Query Frame = 0


Query: 1   MATSISSLAFSLSSLSFSSQVSHKPTALSFPRSKSLLISPSSSTSPLLVSASAAAAVETA 60
           MATSISSLAFSLSSLSFSSQVSHKP+ALSFPRSKSLLISPSSSTS L+V+ASAAA VETA
Sbjct: 1   MATSISSLAFSLSSLSFSSQVSHKPSALSFPRSKSLLISPSSSTSSLVVTASAAAVVETA 60

Query: 61  DLKSFVKSSLPGGFAAQTLIGTGRRKSAVARVVLREGTGKVIINYRDAKEYLQGNPLWLQ 120
           DLK+FVKSSLPGGFAAQTL GTGRRKSAVARVVLREGTGKVIINYR+AKEYLQGNPLWLQ
Sbjct: 61  DLKTFVKSSLPGGFAAQTLFGTGRRKSAVARVVLREGTGKVIINYREAKEYLQGNPLWLQ 120

Query: 121 YVKVPLVTLGYESSYDVFVKAEGGGLSGQAQAISLGIARALLKVSDDHRSPLKKEGLLTR 180
           YVK+PLVTLGYESSYDVFVKAEGGGLSGQAQAISLGIARALLKVSDDHRSPLKKEGLLTR
Sbjct: 121 YVKIPLVTLGYESSYDVFVKAEGGGLSGQAQAISLGIARALLKVSDDHRSPLKKEGLLTR 180

Query: 181 DSRVVERKKAGLKKARKAPQFSKR 204
           D+RVVERKKAGLKKARKAPQFSKR
Sbjct: 181 DARVVERKKAGLKKARKAPQFSKR 204

[Close]

BLAST of IVF0008365 vs. NCBI nr
Match: XP_022143016.1 (30S ribosomal protein S9, chloroplastic [Momordica charantia])

HSP 1 Score: 335 bits (858), Expect = 1.44e-114
Identity = 183/204 (89.71%), Postives = 195/204 (95.59%), Query Frame = 0


Query: 1   MATSISSLAFSLSSLSFSSQVSHKPTALSFPRSKSLLISPSSSTSPLLVSASAAAAVETA 60
           MA+SISSLAFSLSSLSFSSQ+S KP  LSFPRSKSL+IS   ++SPL+VSASAA  VETA
Sbjct: 1   MASSISSLAFSLSSLSFSSQISQKPNGLSFPRSKSLVISHPCNSSPLVVSASAATGVETA 60

Query: 61  DLKSFVKSSLPGGFAAQTLIGTGRRKSAVARVVLREGTGKVIINYRDAKEYLQGNPLWLQ 120
           +L+SFVKS LPGGFAAQTLIGTGRRKSA+ARVV++EGTGKVIINYRDAKEYLQGNPLWLQ
Sbjct: 61  ELRSFVKSRLPGGFAAQTLIGTGRRKSAIARVVIQEGTGKVIINYRDAKEYLQGNPLWLQ 120

Query: 121 YVKVPLVTLGYESSYDVFVKAEGGGLSGQAQAISLGIARALLKVSDDHRSPLKKEGLLTR 180
           YVKVPLVTLGYESSYDVFVKAEGGGLSGQAQAISLGIARALLKVSDDHR+PLKKEGLLTR
Sbjct: 121 YVKVPLVTLGYESSYDVFVKAEGGGLSGQAQAISLGIARALLKVSDDHRAPLKKEGLLTR 180

Query: 181 DSRVVERKKAGLKKARKAPQFSKR 204
           DSRVVERKKAGLKKARKAPQFSKR
Sbjct: 181 DSRVVERKKAGLKKARKAPQFSKR 204

[Close]

BLAST of IVF0008365 vs. NCBI nr
Match: XP_022982074.1 (30S ribosomal protein S9, chloroplastic [Cucurbita maxima])

HSP 1 Score: 333 bits (854), Expect = 5.84e-114
Identity = 185/204 (90.69%), Postives = 194/204 (95.10%), Query Frame = 0


Query: 1   MATSISSLAFSLSSLSFSSQVSHKPTALSFPRSKSLLISPSSSTSPLLVSASAAAAVETA 60
           MATS+SSLAFSLSSLSFSSQVS  P ALSFPRSKSL+IS S S SPL+VSASA +AVETA
Sbjct: 1   MATSVSSLAFSLSSLSFSSQVSQIPNALSFPRSKSLVISHSKSNSPLVVSASATSAVETA 60

Query: 61  DLKSFVKSSLPGGFAAQTLIGTGRRKSAVARVVLREGTGKVIINYRDAKEYLQGNPLWLQ 120
           +LK++VKS LPGGFAAQTLIGTGRRKSAVARVVL+EGTGKVIINYRDAKEYLQGNPLWLQ
Sbjct: 61  ELKNYVKSRLPGGFAAQTLIGTGRRKSAVARVVLQEGTGKVIINYRDAKEYLQGNPLWLQ 120

Query: 121 YVKVPLVTLGYESSYDVFVKAEGGGLSGQAQAISLGIARALLKVSDDHRSPLKKEGLLTR 180
           YVKVPL+TLGYESSYDVFVKAEGGGLSGQAQAISLGIARALLKVS DHR PLKKEGLLTR
Sbjct: 121 YVKVPLLTLGYESSYDVFVKAEGGGLSGQAQAISLGIARALLKVSADHRPPLKKEGLLTR 180

Query: 181 DSRVVERKKAGLKKARKAPQFSKR 204
           DSRVVERKKAGLKKARKAPQFSKR
Sbjct: 181 DSRVVERKKAGLKKARKAPQFSKR 204

[Close]

BLAST of IVF0008365 vs. TAIR 10
Match: AT1G74970.1 (ribosomal protein S9 )

HSP 1 Score: 282.0 bits (720), Expect = 3.9e-76
Identity = 155/206 (75.24%), Postives = 175/206 (84.95%), Query Frame = 0


Query: 4   SISSLAFSLSSLSFSSQVSHKPTALSFPRSKSLLISPSSSTSPLLVSASAAAAV-----E 63
           SI++LA SLSSLSFSSQVS +P  +SFPR+ S+   P+ S     +S +A  +      E
Sbjct: 3   SITNLASSLSSLSFSSQVSQRPNTISFPRANSVFALPAKSARRASLSITATVSAPPEEEE 62

Query: 64  TADLKSFVKSSLPGGFAAQTLIGTGRRKSAVARVVLREGTGKVIINYRDAKEYLQGNPLW 123
             +LK +VKS LPGGFAAQ +IGTGRRK A+ARVVL+EGTGKVIINYRDAKEYLQGNPLW
Sbjct: 63  IVELKKYVKSRLPGGFAAQKIIGTGRRKCAIARVVLQEGTGKVIINYRDAKEYLQGNPLW 122

Query: 124 LQYVKVPLVTLGYESSYDVFVKAEGGGLSGQAQAISLGIARALLKVSDDHRSPLKKEGLL 183
           LQYVKVPLVTLGYE+SYD+FVKA GGGLSGQAQAI+LG+ARALLKVS DHRSPLKKEGLL
Sbjct: 123 LQYVKVPLVTLGYENSYDIFVKAHGGGLSGQAQAITLGVARALLKVSADHRSPLKKEGLL 182

Query: 184 TRDSRVVERKKAGLKKARKAPQFSKR 205
           TRD+RVVERKKAGLKKARKAPQFSKR
Sbjct: 183 TRDARVVERKKAGLKKARKAPQFSKR 208

[Close]

BLAST of IVF0008365 vs. TAIR 10
Match: AT3G49080.1 (Ribosomal protein S5 domain 2-like superfamily protein )

HSP 1 Score: 84.3 bits (207), Expect = 1.2e-16
Identity = 54/124 (43.55%), Postives = 72/124 (58.06%), Query Frame = 0


Query: 81  GTGRRKSAVARVVLREGTGKVIINYRDAKEYLQGNPLWLQYVKVPLVTLGYESSYDVFVK 140
           GTGRRK ++ARV ++ G GK  +N ++   Y          ++ PL        +D+   
Sbjct: 308 GTGRRKCSIARVWIQPGEGKFQVNEKEFDVYFPMLDHRAALLR-PLAETKTLGRWDIKCT 367

Query: 141 AEGGGLSGQAQAISLGIARALLKVSDDHRSPLKKEGLLTRDSRVVERKKAGLKKARKAPQ 200
            +GGG +GQ  AI LGI+RAL     D R+ L+  G LTRDSRVVERKK G  KARK+ Q
Sbjct: 368 VKGGGTTGQVGAIQLGISRALQNWEPDMRTSLRAAGFLTRDSRVVERKKPGKAKARKSFQ 427

Query: 201 FSKR 205
           + KR
Sbjct: 428 WVKR 430

The following BLAST results are available for this feature:

BLAST of IVF0008365 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9XJ27	5.5e-75	75.24	30S ribosomal protein S9, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPS9 ...	[more]
P82278	1.5e-72	72.60	30S ribosomal protein S9, chloroplastic OS=Spinacia oleracea OX=3562 GN=PRPS9 PE...	[more]
Q8DMK7	8.6e-36	63.20	30S ribosomal protein S9 OS=Thermosynechococcus elongatus (strain BP-1) OX=19722...	[more]
Q9MUV1	1.5e-35	66.40	30S ribosomal protein S9, chloroplastic OS=Mesostigma viride OX=41882 GN=rps9 PE...	[more]
B2ITM7	2.8e-34	61.29	30S ribosomal protein S9 OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) O...	[more]

BLAST of IVF0008365 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UBW5	3.7e-98	100.00	30S ribosomal protein S9 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A1S3CRR0	3.7e-98	100.00	30S ribosomal protein S9, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103503984 ...	[more]
A0A0A0LDS0	7.2e-94	95.10	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G854240 PE=3 SV=1	[more]
A0A6J1CNY0	2.0e-88	89.71	30S ribosomal protein S9, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111...	[more]
A0A6J1J3K2	5.9e-88	90.69	30S ribosomal protein S9, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111481...	[more]

BLAST of IVF0008365 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008466625.1	2.27e-127	100.00	PREDICTED: 30S ribosomal protein S9, chloroplastic [Cucumis melo] >KAA0051696.1 ...	[more]
XP_038903352.1	9.89e-122	95.59	30S ribosomal protein S9, chloroplastic [Benincasa hispida]	[more]
XP_004147796.1	9.89e-122	95.10	30S ribosomal protein S9, chloroplastic [Cucumis sativus] >KGN59928.1 hypothetic...	[more]
XP_022143016.1	1.44e-114	89.71	30S ribosomal protein S9, chloroplastic [Momordica charantia]	[more]
XP_022982074.1	5.84e-114	90.69	30S ribosomal protein S9, chloroplastic [Cucurbita maxima]	[more]

BLAST of IVF0008365 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G74970.1	3.9e-76	75.24	ribosomal protein S9	[more]
AT3G49080.1	1.2e-16	43.55	Ribosomal protein S5 domain 2-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014721	Ribosomal protein S5 domain 2-type fold, subgroup	GENE3D	3.30.230.10		coord: 70..204 e-value: 1.3E-49 score: 169.7
IPR000754	Ribosomal protein S9	PFAM	PF00380	Ribosomal_S9	coord: 83..204 e-value: 1.1E-41 score: 142.2
IPR000754	Ribosomal protein S9	PANTHER	PTHR21569	RIBOSOMAL PROTEIN S9	coord: 59..204
None	No IPR available	PANTHER	PTHR21569:SF1	28S RIBOSOMAL PROTEIN S9, MITOCHONDRIAL	coord: 59..204
IPR020574	Ribosomal protein S9, conserved site	PROSITE	PS00360	RIBOSOMAL_S9	coord: 143..161
IPR023035	Ribosomal protein S9, bacterial/plastid	HAMAP	MF_00532_B	Ribosomal_S9_B	coord: 74..204 score: 32.63847
IPR020568	Ribosomal protein S5 domain 2-type fold	SUPERFAMILY	54211	Ribosomal protein S5 domain 2-like	coord: 78..204

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0008365.2	IVF0008365.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0000312	plastid small ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0003735	structural constituent of ribosome