Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTCCTCCATCAACACAAATCAAATGTTCTCTTCAACTTCAGATTCTCCATTTTTGTTTCTCATCAGATTCTCATTCTCCAATTCTCTCAACTTTTAACACGCCTTGCTAAATCCGTGCAAACCCCGATCCACGTAGTTTCCATTTTCAAATTCTAAGGTCCAATGGACTCCATTGCTACACCCAAATCCAAGAAGAAAAACAAATTGTTTCCCTGTTTTCGTGCGGCAGCTTCCGGCAGTGGCCATGTCAAAGTTCGATCTAAGGACGATTCAGAGGACGTTTTTCCGTTTATAACGGTCGATGAGAACGTGCGGCCGTTGTGTGGATGCGATGGAGATTCCGGTCACCGTAAAAAGAAAGGCAGTGCCGGTGCTTTGTCACGGGCGTTTAAGGCTGTCTTATTCGGAACTTCATTGGTTTGTTGGCCGATCTAAAATTTTCCTTCTCTGTTTTTCTTCTTCTACGATTGATTATTTTCTTAGACTTTGCTGGATGGATTGCAGGCGAAGAAGATCAGAAAAAGAAAAGCAAAAGAAAAGGAAAATTCGAAGAACGAGATCAATCAAATGCATCAAGCTCTGTCTTCAATTGGCAATAGATCAGGAACTGCTTCGGATAATCTAAATTTATATCACAACTCTTCTACTCGCTCTTCACGTACTTCGGCGCCATTTTCATCCTCCTCCTTCTGCAGCTCGTCTCCTGCCTCATCGGAAATGAGCGAAATATCATTCCGATTTTATCCAAATGGATCGAATCGACTGTTGAGACAAATAAATTTGAGAAAAATCTTGAGCGGTTGGTTTGTGCTACTGGTATGTCTATTAAACTTGATATTATGGGGGAAATTGGGAGCTATTATGTGCACTTCGGTTTGGATCCTGTGTTTGTACCGACGGAGGATGGGATTGAAGAAAGGGAGTGCGGTGGCGATGAGTTCGGGGGAATATTATAAGAGAAGAATCGGGATGGAAGGATTTTTGAAGAGAGAGCGTTCTTCAAGTGCTCAAAATTCAATCTTGCGCATTGATTGATCCAACTGTGCCAAAAGGCGCCAAACATAATTTTCGGAAAATAAAATGGTTATCACAAACTTCTAAATTTGTACATTCATTACATTATTTTATTTGTTGTTGTTATTATTTCT
mRNA sequence
CTCCTCCATCAACACAAATCAAATGTTCTCTTCAACTTCAGATTCTCCATTTTTGTTTCTCATCAGATTCTCATTCTCCAATTCTCTCAACTTTTAACACGCCTTGCTAAATCCGTGCAAACCCCGATCCACGTAGTTTCCATTTTCAAATTCTAAGGTCCAATGGACTCCATTGCTACACCCAAATCCAAGAAGAAAAACAAATTGTTTCCCTGTTTTCGTGCGGCAGCTTCCGGCAGTGGCCATGTCAAAGTTCGATCTAAGGACGATTCAGAGGACGTTTTTCCGTTTATAACGGTCGATGAGAACGTGCGGCCGTTGTGTGGATGCGATGGAGATTCCGGTCACCGTAAAAAGAAAGGCAGTGCCGGTGCTTTGTCACGGGCGTTTAAGGCTGTCTTATTCGGAACTTCATTGGCGAAGAAGATCAGAAAAAGAAAAGCAAAAGAAAAGGAAAATTCGAAGAACGAGATCAATCAAATGCATCAAGCTCTGTCTTCAATTGGCAATAGATCAGGAACTGCTTCGGATAATCTAAATTTATATCACAACTCTTCTACTCGCTCTTCACGTACTTCGGCGCCATTTTCATCCTCCTCCTTCTGCAGCTCGTCTCCTGCCTCATCGGAAATGAGCGAAATATCATTCCGATTTTATCCAAATGGATCGAATCGACTGTTGAGACAAATAAATTTGAGAAAAATCTTGAGCGGTTGGTTTGTGCTACTGGTATGTCTATTAAACTTGATATTATGGGGGAAATTGGGAGCTATTATGTGCACTTCGGTTTGGATCCTGTGTTTGTACCGACGGAGGATGGGATTGAAGAAAGGGAGTGCGGTGGCGATGAGTTCGGGGGAATATTATAAGAGAAGAATCGGGATGGAAGGATTTTTGAAGAGAGAGCGTTCTTCAAGTGCTCAAAATTCAATCTTGCGCATTGATTGATCCAACTGTGCCAAAAGGCGCCAAACATAATTTTCGGAAAATAAAATGGTTATCACAAACTTCTAAATTTGTACATTCATTACATTATTTTATTTGTTGTTGTTATTATTTCT
Coding sequence (CDS)
ATGGACTCCATTGCTACACCCAAATCCAAGAAGAAAAACAAATTGTTTCCCTGTTTTCGTGCGGCAGCTTCCGGCAGTGGCCATGTCAAAGTTCGATCTAAGGACGATTCAGAGGACGTTTTTCCGTTTATAACGGTCGATGAGAACGTGCGGCCGTTGTGTGGATGCGATGGAGATTCCGGTCACCGTAAAAAGAAAGGCAGTGCCGGTGCTTTGTCACGGGCGTTTAAGGCTGTCTTATTCGGAACTTCATTGGCGAAGAAGATCAGAAAAAGAAAAGCAAAAGAAAAGGAAAATTCGAAGAACGAGATCAATCAAATGCATCAAGCTCTGTCTTCAATTGGCAATAGATCAGGAACTGCTTCGGATAATCTAAATTTATATCACAACTCTTCTACTCGCTCTTCACGTACTTCGGCGCCATTTTCATCCTCCTCCTTCTGCAGCTCGTCTCCTGCCTCATCGGAAATGAGCGAAATATCATTCCGATTTTATCCAAATGGATCGAATCGACTGTTGAGACAAATAAATTTGAGAAAAATCTTGAGCGGTTGGTTTGTGCTACTGGTATGTCTATTAAACTTGATATTATGGGGGAAATTGGGAGCTATTATGTGCACTTCGGTTTGGATCCTGTGTTTGTACCGACGGAGGATGGGATTGAAGAAAGGGAGTGCGGTGGCGATGAGTTCGGGGGAATATTATAAGAGAAGAATCGGGATGGAAGGATTTTTGAAGAGAGAGCGTTCTTCAAGTGCTCAAAATTCAATCTTGCGCATTGATTGA
Protein sequence
MDSIATPKSKKKNKLFPCFRAAASGSGHVKVRSKDDSEDVFPFITVDENVRPLCGCDGDSGHRKKKGSAGALSRAFKAVLFGTSLAKKIRKRKAKEKENSKNEINQMHQALSSIGNRSGTASDNLNLYHNSSTRSSRTSAPFSSSSFCSSSPASSEMSEISFRFYPNGSNRLLRQINLRKILSGWFVLLVCLLNLILWGKLGAIMCTSVWILCLYRRRMGLKKGSAVAMSSGEYYKRRIGMEGFLKRERSSSAQNSILRID
Homology
BLAST of IVF0024399 vs. ExPASy TrEMBL
Match:
A0A5A7SZR0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold110G001060 PE=4 SV=1)
HSP 1 Score: 496.5 bits (1277), Expect = 6.8e-137
Identity = 261/261 (100.00%), Postives = 261/261 (100.00%), Query Frame = 0
Query: 1 MDSIATPKSKKKNKLFPCFRAAASGSGHVKVRSKDDSEDVFPFITVDENVRPLCGCDGDS 60
MDSIATPKSKKKNKLFPCFRAAASGSGHVKVRSKDDSEDVFPFITVDENVRPLCGCDGDS
Sbjct: 1 MDSIATPKSKKKNKLFPCFRAAASGSGHVKVRSKDDSEDVFPFITVDENVRPLCGCDGDS 60
Query: 61 GHRKKKGSAGALSRAFKAVLFGTSLAKKIRKRKAKEKENSKNEINQMHQALSSIGNRSGT 120
GHRKKKGSAGALSRAFKAVLFGTSLAKKIRKRKAKEKENSKNEINQMHQALSSIGNRSGT
Sbjct: 61 GHRKKKGSAGALSRAFKAVLFGTSLAKKIRKRKAKEKENSKNEINQMHQALSSIGNRSGT 120
Query: 121 ASDNLNLYHNSSTRSSRTSAPFSSSSFCSSSPASSEMSEISFRFYPNGSNRLLRQINLRK 180
ASDNLNLYHNSSTRSSRTSAPFSSSSFCSSSPASSEMSEISFRFYPNGSNRLLRQINLRK
Sbjct: 121 ASDNLNLYHNSSTRSSRTSAPFSSSSFCSSSPASSEMSEISFRFYPNGSNRLLRQINLRK 180
Query: 181 ILSGWFVLLVCLLNLILWGKLGAIMCTSVWILCLYRRRMGLKKGSAVAMSSGEYYKRRIG 240
ILSGWFVLLVCLLNLILWGKLGAIMCTSVWILCLYRRRMGLKKGSAVAMSSGEYYKRRIG
Sbjct: 181 ILSGWFVLLVCLLNLILWGKLGAIMCTSVWILCLYRRRMGLKKGSAVAMSSGEYYKRRIG 240
Query: 241 MEGFLKRERSSSAQNSILRID 262
MEGFLKRERSSSAQNSILRID
Sbjct: 241 MEGFLKRERSSSAQNSILRID 261
BLAST of IVF0024399 vs. ExPASy TrEMBL
Match:
A0A0A0LIJ9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G851180 PE=4 SV=1)
HSP 1 Score: 281.6 bits (719), Expect = 3.4e-72
Identity = 155/179 (86.59%), Postives = 159/179 (88.83%), Query Frame = 0
Query: 1 MDSIATPKSKKKNKLFPCFRAAASGSGHVKVRSKDDSEDVFPFITVDENVRPLCGCDGDS 60
MD+IATPK KKKNKLFPCFR+AASG GHVKVRSKD SEDVFPFITVDENVRPL G DGDS
Sbjct: 1 MDAIATPKLKKKNKLFPCFRSAASGGGHVKVRSKDGSEDVFPFITVDENVRPLYGGDGDS 60
Query: 61 GHRKKKGSAGALSRAFKAVLFGTSLAKKIRKRKAKEKENSKNEINQMHQALSSIG-NRSG 120
GHRKKKGSAGA SRA KAVLFGTSLAKKIRKRK KE +NSK EINQ HQA SSIG NRS
Sbjct: 61 GHRKKKGSAGAFSRALKAVLFGTSLAKKIRKRKEKENQNSKKEINQRHQAPSSIGNNRSR 120
Query: 121 TASDNLNLYHNSSTRSSRTSAPFSSSSFCSSSPASSEMSEISFRFYPNGSNRLLRQINL 179
TASDNLN Y NSSTRSSRTSAPFSSSSFCSSSPASSEMSEISFRFYPNGSNRL + L
Sbjct: 121 TASDNLNFYRNSSTRSSRTSAPFSSSSFCSSSPASSEMSEISFRFYPNGSNRLGMSVKL 179
BLAST of IVF0024399 vs. ExPASy TrEMBL
Match:
A0A6J1IWY5 (uncharacterized protein LOC111480657 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111480657 PE=4 SV=1)
HSP 1 Score: 258.5 bits (659), Expect = 3.1e-65
Identity = 166/275 (60.36%), Postives = 191/275 (69.45%), Query Frame = 0
Query: 1 MDSIATPKSKKKNKLFPCFRAAASGSGHVKVRSKDDS-EDVFPFITVDE-------NVRP 60
MDS A KSKK K FPCFR+ AS S VR D + E VFPF+ V+E NV+P
Sbjct: 1 MDSFAATKSKK--KFFPCFRSTASSSPVRTVRGMDAADEQVFPFMAVEERNGMMLHNVQP 60
Query: 61 LCGCDGDSGHRKKKGSAGALSRAFKAVLFGTSLAKKIRKRKAKEKENSKNEINQMHQALS 120
GC SG +KK G GALSRA KAVLFGTSLAKKIRKRK K+KENS NE NQ Q LS
Sbjct: 61 FDGCGDVSGRQKKGGGGGALSRALKAVLFGTSLAKKIRKRKRKQKENS-NEENQRRQLLS 120
Query: 121 SIGNRSGTASDNLNLYHNSSTRSSRTSAPFSSSSFCSSSPASSEMSEISFRFYPNGSNRL 180
SI +RS + + NSST SSR SAPFSS+SFCSSSP SSE++EISFRF+P SNRL
Sbjct: 121 SISSRSSDPN-----FRNSSTCSSRISAPFSSTSFCSSSPTSSEINEISFRFHPTASNRL 180
Query: 181 LRQINLRKILSGWFVLLVCLLNLILWGKLGAIMCTSVWILC--LYRRRMGLK----KGSA 240
RQINLR WFVLLVCLL+L+LW K+GA +CTS+WILC YRR +G + K SA
Sbjct: 181 FRQINLRNTSRCWFVLLVCLLSLVLWEKIGATVCTSIWILCFHFYRREIGFRSPDDKASA 240
Query: 241 VAMSSGEYYKRRIGMEGFLKRERSSSAQNSILRID 262
AMSS EY KR I +EGFL R+R S+ +NSI ID
Sbjct: 241 AAMSSDEYRKRTI-LEGFLNRDR-SAVRNSITHID 265
BLAST of IVF0024399 vs. ExPASy TrEMBL
Match:
A0A6J1FRN0 (uncharacterized protein LOC111446618 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111446618 PE=4 SV=1)
HSP 1 Score: 250.0 bits (637), Expect = 1.1e-62
Identity = 162/275 (58.91%), Postives = 189/275 (68.73%), Query Frame = 0
Query: 1 MDSIATPKSKKKNKLFPCFRAAASGSGHVKVRSKDDS-EDVFPFITVDE-------NVRP 60
MDS A KSKK K FPCFR+ AS VR + + E VFPF+ V+E NV+P
Sbjct: 1 MDSFAATKSKK--KFFPCFRSTASSGPVRTVRGMNAADEQVFPFMAVEERNGMMLHNVQP 60
Query: 61 LCGCDGDSGHRKKKGSAGALSRAFKAVLFGTSLAKKIRKRKAKEKENSKNEINQMHQALS 120
GC SG +KK G GALSRA KAVLFGTSLAKKIRK+K K+KENS NE NQ + LS
Sbjct: 61 FDGCGNVSGRQKKGGGGGALSRALKAVLFGTSLAKKIRKKKRKQKENS-NEENQRRRLLS 120
Query: 121 SIGNRSGTASDNLNLYHNSSTRSSRTSAPFSSSSFCSSSPASSEMSEISFRFYPNGSNRL 180
SI +RS + + NSST SSRTSAPFSS+SFCSSSP S E+ EISFRF+P SNRL
Sbjct: 121 SISSRSSDPN-----FRNSSTCSSRTSAPFSSASFCSSSPTSPEIKEISFRFHPTASNRL 180
Query: 181 LRQINLRKILSGWFVLLVCLLNLILWGKLGAIMCTSVWILC--LYRRRMGLK----KGSA 240
RQINLRK WFVLLV LL+L+LW K+GA +CTS+WILC YRR +G + K SA
Sbjct: 181 FRQINLRKTSRCWFVLLVGLLSLVLWEKIGATVCTSIWILCFHFYRREIGFRSPDDKASA 240
Query: 241 VAMSSGEYYKRRIGMEGFLKRERSSSAQNSILRID 262
AMSS EY KR I +EGFL R+R S+ +NSI ID
Sbjct: 241 AAMSSDEYKKRTI-LEGFLNRDR-SAVRNSITHID 265
BLAST of IVF0024399 vs. ExPASy TrEMBL
Match:
A0A6J1F8B9 (uncharacterized protein LOC111443063 OS=Cucurbita moschata OX=3662 GN=LOC111443063 PE=4 SV=1)
HSP 1 Score: 249.2 bits (635), Expect = 1.9e-62
Identity = 163/265 (61.51%), Postives = 185/265 (69.81%), Query Frame = 0
Query: 1 MDSIATPKSKKKNKLFPCFRAAASGSGHVKVRSKDDSEDVFPFITVDENVRPLCGCDGDS 60
M+SI KSKK+NKLFPCFRAAASGS V E VFPF+TV +NV P+ D DS
Sbjct: 1 MESIVVTKSKKRNKLFPCFRAAASGS---PVGHGAPEEQVFPFMTVRDNVLPVDRGDEDS 60
Query: 61 GHRKKKGSAGALSRAFKAVLFGTSLAKKIRKRKAKEKENSKNEINQMHQALSSIGNRSGT 120
KKKG GA SRA +AV+FGTSLAKKI KRKAK +NSK +Q H A S +RS +
Sbjct: 61 SRWKKKGGRGAWSRAIRAVIFGTSLAKKIAKRKAKHYQNSKE--SQRHLAPSWFSSRSRS 120
Query: 121 ASDNLNLYHNSSTRSSRTSAPFSSSSFCSSSPASSEMSEISFRFYPNGSNRLLRQINLRK 180
SD LN Y N STRSS PFSS SF SSSP+S+E S+ SFR YP SNRL QIN RK
Sbjct: 121 GSD-LN-YRNYSTRSSE---PFSSPSFYSSSPSSTEKSDSSFRLYPTASNRLYTQINFRK 180
Query: 181 ILSGWFVLLVCLLNLILWGKLGAIMCTSVWILCLYRRRMGLK----KGSAVAMSSGEYYK 240
I SGWFVLLVCLL+L+LWGK GAI+CTSVW+LCLYR R + K S VAMSSGEY
Sbjct: 181 IFSGWFVLLVCLLSLVLWGKTGAIICTSVWLLCLYRWRFRFRSPDDKASTVAMSSGEYND 240
Query: 241 RRIGMEGFLKRERSSSAQNSILRID 262
I ME FLKR+R +A+NS LRID
Sbjct: 241 IEI-MEEFLKRDR-LAARNSTLRID 253
BLAST of IVF0024399 vs. NCBI nr
Match:
KAA0036754.1 (uncharacterized protein E6C27_scaffold20G00330 [Cucumis melo var. makuwa] >TYJ95821.1 uncharacterized protein E5676_scaffold110G001060 [Cucumis melo var. makuwa])
HSP 1 Score: 496 bits (1277), Expect = 1.53e-176
Identity = 261/261 (100.00%), Postives = 261/261 (100.00%), Query Frame = 0
Query: 1 MDSIATPKSKKKNKLFPCFRAAASGSGHVKVRSKDDSEDVFPFITVDENVRPLCGCDGDS 60
MDSIATPKSKKKNKLFPCFRAAASGSGHVKVRSKDDSEDVFPFITVDENVRPLCGCDGDS
Sbjct: 1 MDSIATPKSKKKNKLFPCFRAAASGSGHVKVRSKDDSEDVFPFITVDENVRPLCGCDGDS 60
Query: 61 GHRKKKGSAGALSRAFKAVLFGTSLAKKIRKRKAKEKENSKNEINQMHQALSSIGNRSGT 120
GHRKKKGSAGALSRAFKAVLFGTSLAKKIRKRKAKEKENSKNEINQMHQALSSIGNRSGT
Sbjct: 61 GHRKKKGSAGALSRAFKAVLFGTSLAKKIRKRKAKEKENSKNEINQMHQALSSIGNRSGT 120
Query: 121 ASDNLNLYHNSSTRSSRTSAPFSSSSFCSSSPASSEMSEISFRFYPNGSNRLLRQINLRK 180
ASDNLNLYHNSSTRSSRTSAPFSSSSFCSSSPASSEMSEISFRFYPNGSNRLLRQINLRK
Sbjct: 121 ASDNLNLYHNSSTRSSRTSAPFSSSSFCSSSPASSEMSEISFRFYPNGSNRLLRQINLRK 180
Query: 181 ILSGWFVLLVCLLNLILWGKLGAIMCTSVWILCLYRRRMGLKKGSAVAMSSGEYYKRRIG 240
ILSGWFVLLVCLLNLILWGKLGAIMCTSVWILCLYRRRMGLKKGSAVAMSSGEYYKRRIG
Sbjct: 181 ILSGWFVLLVCLLNLILWGKLGAIMCTSVWILCLYRRRMGLKKGSAVAMSSGEYYKRRIG 240
Query: 241 MEGFLKRERSSSAQNSILRID 261
MEGFLKRERSSSAQNSILRID
Sbjct: 241 MEGFLKRERSSSAQNSILRID 261
BLAST of IVF0024399 vs. NCBI nr
Match:
XP_011652374.1 (uncharacterized protein LOC105435019 [Cucumis sativus] >KAE8651304.1 hypothetical protein Csa_001877 [Cucumis sativus])
HSP 1 Score: 430 bits (1105), Expect = 2.97e-150
Identity = 233/262 (88.93%), Postives = 241/262 (91.98%), Query Frame = 0
Query: 1 MDSIATPKSKKKNKLFPCFRAAASGSGHVKVRSKDDSEDVFPFITVDENVRPLCGCDGDS 60
MD+IATPK KKKNKLFPCFR+AASG GHVKVRSKD SEDVFPFITVDENVRPL G DGDS
Sbjct: 1 MDAIATPKLKKKNKLFPCFRSAASGGGHVKVRSKDGSEDVFPFITVDENVRPLYGGDGDS 60
Query: 61 GHRKKKGSAGALSRAFKAVLFGTSLAKKIRKRKAKEKENSKNEINQMHQALSSIGN-RSG 120
GHRKKKGSAGA SRA KAVLFGTSLAKKIRKRK KE +NSK EINQ HQA SSIGN RS
Sbjct: 61 GHRKKKGSAGAFSRALKAVLFGTSLAKKIRKRKEKENQNSKKEINQRHQAPSSIGNNRSR 120
Query: 121 TASDNLNLYHNSSTRSSRTSAPFSSSSFCSSSPASSEMSEISFRFYPNGSNRLLRQINLR 180
TASDNLN Y NSSTRSSRTSAPFSSSSFCSSSPASSEMSEISFRFYPNGSNRLLRQINL+
Sbjct: 121 TASDNLNFYRNSSTRSSRTSAPFSSSSFCSSSPASSEMSEISFRFYPNGSNRLLRQINLK 180
Query: 181 KILSGWFVLLVCLLNLILWGKLGAIMCTSVWILCLYRRRMGLKKGSAVAMSSGEYYKRRI 240
KI SGWFVL+VCLLNL+LWGKLGAIMCTSVWILCLYRRRMGLKKGSAV SSGEY KRRI
Sbjct: 181 KIFSGWFVLVVCLLNLVLWGKLGAIMCTSVWILCLYRRRMGLKKGSAVGTSSGEYSKRRI 240
Query: 241 GMEGFLKRERSSSAQNSILRID 261
GMEGFLKR+RSS AQNS+LRID
Sbjct: 241 GMEGFLKRDRSS-AQNSMLRID 261
BLAST of IVF0024399 vs. NCBI nr
Match:
XP_038900051.1 (uncharacterized protein LOC120087211 [Benincasa hispida])
HSP 1 Score: 341 bits (874), Expect = 4.00e-115
Identity = 197/266 (74.06%), Postives = 214/266 (80.45%), Query Frame = 0
Query: 1 MDSIATPKSKKKNKLFPCFRAAASGSGHVKVRSKDDSED--VFPFITVDENVRPLCGCDG 60
MDSI KSKKKNKLFPCFRAAASG R K+D+ D +FPFITVD+ VR G DG
Sbjct: 1 MDSITAIKSKKKNKLFPCFRAAASGGPVGTARCKEDASDEHIFPFITVDDGVRSFDGGDG 60
Query: 61 DSGHRKKKGSAGALSRAFKAVLFGTSLAKKIRKRKAKEKENSKNEINQMHQALSSIGNRS 120
DSGHRKKK GALSRA KAVLFGTSLAKKIRKRKAKEK+NSK E NQ HQA SI N
Sbjct: 61 DSGHRKKKNGGGALSRAVKAVLFGTSLAKKIRKRKAKEKQNSKTE-NQRHQAPFSISNNR 120
Query: 121 GTASDNLNLYHNSSTRSSRTSAPFSSSSFCSSSPASSEMSEISFRFYPNGSNRLLRQINL 180
+ +LN YHNSST SSRTSAPFSSSSFCSSSP+SSEMS+ISFRFYP SNRL RQIN
Sbjct: 121 SRIASDLN-YHNSSTCSSRTSAPFSSSSFCSSSPSSSEMSDISFRFYPTASNRLFRQINF 180
Query: 181 RKILSGWFVLLVCLLNLILWGKLGAIMCTSVWILCLYRRRMGLK----KGSAVAMSSGEY 240
KI SGWF+LLVCLL+L+LWGK+GAI+CTSVWILCLYRRR+GLK K SA AMSSGEY
Sbjct: 181 GKIFSGWFLLLVCLLSLVLWGKIGAIICTSVWILCLYRRRIGLKSSDDKVSAGAMSSGEY 240
Query: 241 YKRRIGMEGFLKRERSSSAQNSILRI 260
YKRR+ MEGFLKR+ S AQNSILRI
Sbjct: 241 YKRRVVMEGFLKRDHSG-AQNSILRI 263
BLAST of IVF0024399 vs. NCBI nr
Match:
XP_022981581.1 (uncharacterized protein LOC111480657 isoform X1 [Cucurbita maxima])
HSP 1 Score: 258 bits (658), Expect = 2.58e-82
Identity = 166/275 (60.36%), Postives = 191/275 (69.45%), Query Frame = 0
Query: 1 MDSIATPKSKKKNKLFPCFRAAASGSGHVKVRSKDDS-EDVFPFITVDE-------NVRP 60
MDS A KSKKK FPCFR+ AS S VR D + E VFPF+ V+E NV+P
Sbjct: 1 MDSFAATKSKKK--FFPCFRSTASSSPVRTVRGMDAADEQVFPFMAVEERNGMMLHNVQP 60
Query: 61 LCGCDGDSGHRKKKGSAGALSRAFKAVLFGTSLAKKIRKRKAKEKENSKNEINQMHQALS 120
GC SG +KK G GALSRA KAVLFGTSLAKKIRKRK K+KENS NE NQ Q LS
Sbjct: 61 FDGCGDVSGRQKKGGGGGALSRALKAVLFGTSLAKKIRKRKRKQKENS-NEENQRRQLLS 120
Query: 121 SIGNRSGTASDNLNLYHNSSTRSSRTSAPFSSSSFCSSSPASSEMSEISFRFYPNGSNRL 180
SI +RS + + NSST SSR SAPFSS+SFCSSSP SSE++EISFRF+P SNRL
Sbjct: 121 SISSRSSDPN-----FRNSSTCSSRISAPFSSTSFCSSSPTSSEINEISFRFHPTASNRL 180
Query: 181 LRQINLRKILSGWFVLLVCLLNLILWGKLGAIMCTSVWILCL--YRRRMGLK----KGSA 240
RQINLR WFVLLVCLL+L+LW K+GA +CTS+WILC YRR +G + K SA
Sbjct: 181 FRQINLRNTSRCWFVLLVCLLSLVLWEKIGATVCTSIWILCFHFYRREIGFRSPDDKASA 240
Query: 241 VAMSSGEYYKRRIGMEGFLKRERSSSAQNSILRID 261
AMSS EY KR I +EGFL R+RS+ +NSI ID
Sbjct: 241 AAMSSDEYRKRTI-LEGFLNRDRSA-VRNSITHID 265
BLAST of IVF0024399 vs. NCBI nr
Match:
KAG6591997.1 (hypothetical protein SDJN03_14343, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 251 bits (642), Expect = 4.63e-80
Identity = 164/265 (61.89%), Postives = 186/265 (70.19%), Query Frame = 0
Query: 1 MDSIATPKSKKKNKLFPCFRAAASGSGHVKVRSKDDSEDVFPFITVDENVRPLCGCDGDS 60
M+SI KSKK+NKLFPCFRAAASGS V E VFPF+TV +NV P+ D DS
Sbjct: 1 MESIVVTKSKKRNKLFPCFRAAASGS---PVGHGAPEEQVFPFMTVRDNVLPVDRGDEDS 60
Query: 61 GHRKKKGSAGALSRAFKAVLFGTSLAKKIRKRKAKEKENSKNEINQMHQALSSIGNRSGT 120
KKKG GA SRA +AV+FGTSLAKKI KRKAK +NSK +Q H A S +RS +
Sbjct: 61 SRWKKKGGRGAWSRAVRAVIFGTSLAKKIAKRKAKHYQNSKE--SQRHLAPSWFSSRSRS 120
Query: 121 ASDNLNLYHNSSTRSSRTSAPFSSSSFCSSSPASSEMSEISFRFYPNGSNRLLRQINLRK 180
SD LN Y N STRSS PFSSSSF SSSP+S+E S+ SFR YP SNRL QIN RK
Sbjct: 121 GSD-LN-YRNYSTRSSE---PFSSSSFYSSSPSSTEKSDSSFRLYPTASNRLYTQINFRK 180
Query: 181 ILSGWFVLLVCLLNLILWGKLGAIMCTSVWILCLYRRRMGLK----KGSAVAMSSGEYYK 240
I SGWFVLLVCLL+L+LWGK GAI+CTSVW+LC YR R G + K S VAMSSGEY
Sbjct: 181 IFSGWFVLLVCLLSLVLWGKTGAIICTSVWLLCWYRWRFGFRSPDDKASTVAMSSGEYND 240
Query: 241 RRIGMEGFLKRERSSSAQNSILRID 261
I ME FLKR+R + A+NS LRID
Sbjct: 241 IEI-MEEFLKRDRLA-ARNSTLRID 253
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5A7SZR0 | 6.8e-137 | 100.00 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A0A0LIJ9 | 3.4e-72 | 86.59 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G851180 PE=4 SV=1 | [more] |
A0A6J1IWY5 | 3.1e-65 | 60.36 | uncharacterized protein LOC111480657 isoform X1 OS=Cucurbita maxima OX=3661 GN=L... | [more] |
A0A6J1FRN0 | 1.1e-62 | 58.91 | uncharacterized protein LOC111446618 isoform X1 OS=Cucurbita moschata OX=3662 GN... | [more] |
A0A6J1F8B9 | 1.9e-62 | 61.51 | uncharacterized protein LOC111443063 OS=Cucurbita moschata OX=3662 GN=LOC1114430... | [more] |
Match Name | E-value | Identity | Description | |
KAA0036754.1 | 1.53e-176 | 100.00 | uncharacterized protein E6C27_scaffold20G00330 [Cucumis melo var. makuwa] >TYJ95... | [more] |
XP_011652374.1 | 2.97e-150 | 88.93 | uncharacterized protein LOC105435019 [Cucumis sativus] >KAE8651304.1 hypothetica... | [more] |
XP_038900051.1 | 4.00e-115 | 74.06 | uncharacterized protein LOC120087211 [Benincasa hispida] | [more] |
XP_022981581.1 | 2.58e-82 | 60.36 | uncharacterized protein LOC111480657 isoform X1 [Cucurbita maxima] | [more] |
KAG6591997.1 | 4.63e-80 | 61.89 | hypothetical protein SDJN03_14343, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
Match Name | E-value | Identity | Description | |