IVF0004861 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTGCTCGCTGTGCTCATCGCCAACTCCGTCGGCAACATTCTCGTTGAACGGTACCAATTTCTTTTCCCTGTTTGGCTGGAACGGTGCTTTTCATCTTTCTGATCTGCGTTAGCGATAAAATGGTTTTTTTTTTTTTTTGTTATTGATCGCTTTGTTGTAGTTTTCTGTGGTAATTGCTTTGAATGATTGTGTGAAATGTGCGACTGGTTTCAGATGTACTCTGATTAGAATTTAAATTAGATTGAGAAGAGGCGTTTAGGAGTGAAATAATGATGGATAAGGAGGATAAGGAGTACGAAAGTGTCTTGCGTACTTTAATTTTTTGCAATCGAACGGTTGATCATGATTTTTGTTTATTTATTAGGTTTCATGGAGTTCCTGCAGAGGAGCGATTGCATTGGCGATCATTTTTAGTGAAGCTGGGAGCTGATAATCTCAAAGGTGCGAAAAATGAAGAGCTATATGTTGCTTCACACAAGTGAGTGAATCTTCTAATTAGTTCTTTTGAAGCAATTGTAAGTTATTCACAGTGATGCATTATACTTGAAAACTAATTTTTGCTACATTTGAGTAGAGTTTTAAACACTTAGGAAATCAATCCAAACACACTCTTAATCTTCTCCAGCCTCAGTGTGAAAAGAGAGCCAAAATGAAATCAAGTTGGAAATCAAAGGAGTGTTGGGAAATGTGAGTAATTGAAGACGGAACAAACAAGATCACGAAGTATGAAAACAATGAAAAAGAGGTTTAGATTGGAATTGTCAAATTGGAATAAGTTTTAGATTACAAATCGAGCCTAGGATGTTCAACCCAAACATGAGTTTGTTATTACATTACAATACAACTGCATCTCGTTACAATCTACCAAATACTACTACCAAACACTCCCTTAGTGTTTTGATTCCATCTAAAATATTTGCCATTAACATTTTCATATGCTCAAGGGAAATAGATGAGGTTTTATTTGCGTGATTATGTCATCGTGTGTTACTATTGTGCTTCTGAAGTTCATTGTATGCAATTATATATAAAATTTAATGTTTCAAAGAAACCAACCAAAAATCACACTGAGAAACTGTTTCCCAGAACCAAAATTTCCTTATATTTTAAACAGTTGAGAGACCGCAAGAAACTGTAAGGGAGTACAAGCTGATACAATTAAGTCTTTGGTATTCAAGTGGCAATACTTATATAAATCAAATGTACTATGGATTTGGCGTTGAAAATGATATGGTGCCCTTGATTGTGCATAATATAATTAATTGAGACAATCAACGTGGGTTGACCTATTGGTAAATAAAAGGTTTGGGTTTGATAAAGGACTAAGAGAGAATGAGTTTAATCTTCGATGACCATCTACTTAGAATTTTAATATCCCCGAGTTTGTGTAAGCTGAGGATCACTCACAAACATAAAACATCAATCAATTGGCACATGAGCCAACTTCCTTGCTCTAATGTATAAAATCAATGGTGTCAACCATTGGTGGGCTTTTAATTTCATTTATCAATGAAATCTCTGATTTTCTATCTGAAAAAAAGTGTATCCTCCCTGCCAACCAATGGCTTCTCAAATAACTGACTGTTTGCGGTATGTTTTATTTCTAAAGCCTCTTGGTTTACGCAGGAATTGCCTCCACTCCAACCTACAAAGTGAGGTCTTGAAAATAAACTAAAACCTTTGAAAATGGATTGGAAAAAATTTAATAACCAACAACCCCGCACCACCACCCGGGCCTGTAGGGGCTTCTTGAACTACCATTAGAATGCTTGGAATGAAATTATGCCACAATGAATTTTTAAAATAATAGCAATAATTATAGTATTTTATGTATACATTTGATAACCCAAGTTTTCATTGTGAAGAATGAATTGATGACAATGAATTAGCTTCTTCTGCTATGACTAGTACAAAAGGAACGAGGGTTGTGTTCTTAGCTCAAACCTCGCAATGTTCTGAAATAAACTGTTCTCCTGCTAAATAAAATACTTCCCTATTCAAGTATGGACATTCACTTCGATAGCCCCTTTCTACTTTGTAGCACTGCTCGTGTGTGTTTGTTCTTGTTTTTTGTTTTTCCCTTTTGTAAACTGTAGCTGGTTTTACCTGTCAAATCTATCTAAGCTAACTTTCTGTAACAGGTCTGTATATATTGTTTACACTGTGCTTGGCGATGTAGCAGTTTATGTTGTCGGGAAGGACGAATATGATGAATTGGCTTGTAAGTAAATGCTAATTCTTCCATTTTCTTTGCTACTATTATTTATTTATTATTCTTTTTTGCTATGTATCCTCTGCATTAATTTCATTCTCACCTCTTCAAGTGGCAGAAGTGATCTTTGTAATAACATCAGCGATAAAGGATGCCTGTGGGAAAGCTCCAACTGAGCGCTTGTTTCTTGACAAATATGGAAAGATTTGTTTGTGTCTTGATGAAATTGTCTGGACGGTATGCCCCTTCTTTTCTCCCTCACTCAAAATCTTTCTTCTAGGTCTAATCCAGCCAGATATAGCGATAGGCATACTAAAAACATAGAAAGAACTTCAATTCAAGAAATTTCTTTGCCAATTGCCTTTGAGAGAGCAGACTGCCTGCAGGAGAAAAAGGAATGGCACTTTTCATCTGTCACAATTCGATCCTTGGATTTCGTTTCGATCTAAGTTTATTTTGACTGCACTAGTGCTCTTACTGATCATCTGATATGATGTTTATGAAGGGCATCTTGGAGAACACGGAGAAAGACAGGATCAAGAGGCTGATAAGGTTAAAACCTCCCAATGAGTTTTGA ATGTTGCTCGCTGTGCTCATCGCCAACTCCGTCGGCAACATTCTCGTTGAACGGTTTCATGGAGTTCCTGCAGAGGAGCGATTGCATTGGCGATCATTTTTAGTGAAGCTGGGAGCTGATAATCTCAAAGGTGCGAAAAATGAAGAGCTATATGTTGCTTCACACAAGTCTGTATATATTGTTTACACTGTGCTTGGCGATGTAGCAGTTTATGTTGTCGGGAAGGACGAATATGATGAATTGGCTTTGGCAGAAGTGATCTTTGTAATAACATCAGCGATAAAGGATGCCTGTGGGAAAGCTCCAACTGAGCGCTTGTTTCTTGACAAATATGGAAAGATTTGTTTGTGTCTTGATGAAATTGTCTGGACGGGCATCTTGGAGAACACGGAGAAAGACAGGATCAAGAGGCTGATAAGGTTAAAACCTCCCAATGAGTTTTGA ATGTTGCTCGCTGTGCTCATCGCCAACTCCGTCGGCAACATTCTCGTTGAACGGTTTCATGGAGTTCCTGCAGAGGAGCGATTGCATTGGCGATCATTTTTAGTGAAGCTGGGAGCTGATAATCTCAAAGGTGCGAAAAATGAAGAGCTATATGTTGCTTCACACAAGTCTGTATATATTGTTTACACTGTGCTTGGCGATGTAGCAGTTTATGTTGTCGGGAAGGACGAATATGATGAATTGGCTTTGGCAGAAGTGATCTTTGTAATAACATCAGCGATAAAGGATGCCTGTGGGAAAGCTCCAACTGAGCGCTTGTTTCTTGACAAATATGGAAAGATTTGTTTGTGTCTTGATGAAATTGTCTGGACGGGCATCTTGGAGAACACGGAGAAAGACAGGATCAAGAGGCTGATAAGGTTAAAACCTCCCAATGAGTTTTGA MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYIVYTVLGDVAVYVVGKDEYDELALAEVIFVITSAIKDACGKAPTERLFLDKYGKICLCLDEIVWTGILENTEKDRIKRLIRLKPPNEF Homology
BLAST of IVF0004861 vs. ExPASy Swiss-Prot
Match: C0HLF1 (TSET complex member tstD OS=Dictyostelium discoideum OX=44689 GN=tstD PE=1 SV=1) HSP 1 Score: 81.6 bits (200), Expect = 7.9e-15 Identity = 46/144 (31.94%), Postives = 81/144 (56.25%), Query Frame = 0
BLAST of IVF0004861 vs. ExPASy Swiss-Prot
Match: Q5NA06 (Coatomer subunit zeta-3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0838800 PE=2 SV=1) HSP 1 Score: 51.2 bits (121), Expect = 1.1e-05 Identity = 35/131 (26.72%), Postives = 59/131 (45.04%), Query Frame = 0
BLAST of IVF0004861 vs. ExPASy Swiss-Prot
Match: Q54CA7 (Probable coatomer subunit zeta-B OS=Dictyostelium discoideum OX=44689 GN=copZb PE=3 SV=1) HSP 1 Score: 45.1 bits (105), Expect = 8.2e-04 Identity = 40/139 (28.78%), Postives = 67/139 (48.20%), Query Frame = 0
BLAST of IVF0004861 vs. ExPASy TrEMBL
Match: A0A5D3E691 (Coatomer subunit zeta OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G007430 PE=3 SV=1) HSP 1 Score: 295.4 bits (755), Expect = 1.3e-76 Identity = 147/147 (100.00%), Postives = 147/147 (100.00%), Query Frame = 0
BLAST of IVF0004861 vs. ExPASy TrEMBL
Match: A0A1S3CRC6 (Coatomer subunit zeta OS=Cucumis melo OX=3656 GN=LOC103503824 PE=3 SV=1) HSP 1 Score: 295.4 bits (755), Expect = 1.3e-76 Identity = 147/147 (100.00%), Postives = 147/147 (100.00%), Query Frame = 0
BLAST of IVF0004861 vs. ExPASy TrEMBL
Match: A0A5A7TBS4 (Coatomer subunit zeta OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold92G003660 PE=3 SV=1) HSP 1 Score: 295.0 bits (754), Expect = 1.7e-76 Identity = 146/147 (99.32%), Postives = 147/147 (100.00%), Query Frame = 0
BLAST of IVF0004861 vs. ExPASy TrEMBL
Match: A0A0A0LHA5 (Coatomer subunit zeta OS=Cucumis sativus OX=3659 GN=Csa_3G878220 PE=3 SV=1) HSP 1 Score: 292.4 bits (747), Expect = 1.1e-75 Identity = 145/147 (98.64%), Postives = 146/147 (99.32%), Query Frame = 0
BLAST of IVF0004861 vs. ExPASy TrEMBL
Match: A0A6J1BYX2 (Coatomer subunit zeta OS=Momordica charantia OX=3673 GN=LOC111006502 PE=3 SV=1) HSP 1 Score: 292.0 bits (746), Expect = 1.4e-75 Identity = 145/147 (98.64%), Postives = 146/147 (99.32%), Query Frame = 0
BLAST of IVF0004861 vs. NCBI nr
Match: XP_008466411.1 (PREDICTED: uncharacterized protein LOC103503824 [Cucumis melo] >TYK31432.1 SNARE-like superfamily protein [Cucumis melo var. makuwa]) HSP 1 Score: 293 bits (750), Expect = 5.73e-100 Identity = 147/147 (100.00%), Postives = 147/147 (100.00%), Query Frame = 0
BLAST of IVF0004861 vs. NCBI nr
Match: KAA0038809.1 (SNARE-like superfamily protein [Cucumis melo var. makuwa]) HSP 1 Score: 293 bits (749), Expect = 8.14e-100 Identity = 146/147 (99.32%), Postives = 147/147 (100.00%), Query Frame = 0
BLAST of IVF0004861 vs. NCBI nr
Match: XP_038896955.1 (TSET complex member tstD [Benincasa hispida]) HSP 1 Score: 292 bits (747), Expect = 1.64e-99 Identity = 146/147 (99.32%), Postives = 147/147 (100.00%), Query Frame = 0
BLAST of IVF0004861 vs. NCBI nr
Match: XP_004136347.1 (TSET complex member tstD [Cucumis sativus] >KGN60102.1 hypothetical protein Csa_001692 [Cucumis sativus]) HSP 1 Score: 290 bits (742), Expect = 9.51e-99 Identity = 145/147 (98.64%), Postives = 146/147 (99.32%), Query Frame = 0
BLAST of IVF0004861 vs. NCBI nr
Match: XP_022134177.1 (uncharacterized protein LOC111006502 [Momordica charantia]) HSP 1 Score: 290 bits (741), Expect = 1.35e-98 Identity = 145/147 (98.64%), Postives = 146/147 (99.32%), Query Frame = 0
BLAST of IVF0004861 vs. TAIR 10
Match: AT1G15370.1 (SNARE-like superfamily protein ) HSP 1 Score: 258.8 bits (660), Expect = 2.6e-69 Identity = 120/146 (82.19%), Postives = 138/146 (94.52%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|