IVF0012669 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGGAGGACATCCCTGTGGGAAGAGGAAGGCGATACTGAAGGAGAGACAAACCAAAATGACGATGGTGTCGTGGAGGTAAGGGATGACAAAGAAGTGGCCCATTTTTCCTTGAACTTGATGGCAGAATTAAGCTCTCCACAGACGGTGAAGGTCAAGGGGTTGGTTAAAGGACTTGAGGTGGTGGCATTGGTAGACGGAGGAGCAACCCACAACTTTATTGACAAAGAATTGGTGACCTCACGTAAATTGCCAACGTCGAACACAGAGGATCCATTCAGGGCACTGGAATTTGAAAAGGAGTGGTCCTCACTATTGCTGATTTGA ATGGGGAGGACATCCCTGTGGGAAGAGGAAGGCGATACTGAAGGAGAGACAAACCAAAATGACGATGGTGTCGTGGAGGTAAGGGATGACAAAGAAGTGGCCCATTTTTCCTTGAACTTGATGGCAGAATTAAGCTCTCCACAGACGGTGAAGGTCAAGGGGTTGGTTAAAGGACTTGAGGTGGTGGCATTGGTAGACGGAGGAGCAACCCACAACTTTATTGACAAAGAATTGGTGACCTCACGTAAATTGCCAACGTCGAACACAGAGGATCCATTCAGGGCACTGGAATTTGAAAAGGAGTGGTCCTCACTATTGCTGATTTGA ATGGGGAGGACATCCCTGTGGGAAGAGGAAGGCGATACTGAAGGAGAGACAAACCAAAATGACGATGGTGTCGTGGAGGTAAGGGATGACAAAGAAGTGGCCCATTTTTCCTTGAACTTGATGGCAGAATTAAGCTCTCCACAGACGGTGAAGGTCAAGGGGTTGGTTAAAGGACTTGAGGTGGTGGCATTGGTAGACGGAGGAGCAACCCACAACTTTATTGACAAAGAATTGGTGACCTCACGTAAATTGCCAACGTCGAACACAGAGGATCCATTCAGGGCACTGGAATTTGAAAAGGAGTGGTCCTCACTATTGCTGATTTGA MGRTSLWEEEGDTEGETNQNDDGVVEVRDDKEVAHFSLNLMAELSSPQTVKVKGLVKGLEVVALVDGGATHNFIDKELVTSRKLPTSNTEDPFRALEFEKEWSSLLLI Homology
BLAST of IVF0012669 vs. ExPASy TrEMBL
Match: A0A5A7T5F6 (E3 ubiquitin-protein ligase RGLG2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold110G002070 PE=4 SV=1) HSP 1 Score: 144.1 bits (362), Expect = 3.5e-31 Identity = 74/75 (98.67%), Postives = 75/75 (100.00%), Query Frame = 0
BLAST of IVF0012669 vs. ExPASy TrEMBL
Match: A0A5D3CTU6 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold892G00600 PE=4 SV=1) HSP 1 Score: 65.9 bits (159), Expect = 1.2e-07 Identity = 35/80 (43.75%), Postives = 54/80 (67.50%), Query Frame = 0
BLAST of IVF0012669 vs. ExPASy TrEMBL
Match: A0A0D3CF76 (Uncharacterized protein OS=Brassica oleracea var. oleracea OX=109376 PE=4 SV=1) HSP 1 Score: 65.1 bits (157), Expect = 2.1e-07 Identity = 31/64 (48.44%), Postives = 45/64 (70.31%), Query Frame = 0
BLAST of IVF0012669 vs. ExPASy TrEMBL
Match: A0A5D3C129 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold143G001970 PE=4 SV=1) HSP 1 Score: 62.8 bits (151), Expect = 1.0e-06 Identity = 35/79 (44.30%), Postives = 50/79 (63.29%), Query Frame = 0
BLAST of IVF0012669 vs. ExPASy TrEMBL
Match: A0A5A7T7D3 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold322G00110 PE=4 SV=1) HSP 1 Score: 62.4 bits (150), Expect = 1.3e-06 Identity = 35/79 (44.30%), Postives = 52/79 (65.82%), Query Frame = 0
BLAST of IVF0012669 vs. NCBI nr
Match: KAA0036837.1 (E3 ubiquitin-protein ligase RGLG2 [Cucumis melo var. makuwa] >TYJ95904.1 E3 ubiquitin-protein ligase RGLG2 [Cucumis melo var. makuwa]) HSP 1 Score: 143 bits (360), Expect = 1.78e-39 Identity = 74/74 (100.00%), Postives = 74/74 (100.00%), Query Frame = 0
BLAST of IVF0012669 vs. NCBI nr
Match: XP_038904464.1 (uncharacterized protein LOC120090832 [Benincasa hispida]) HSP 1 Score: 69.7 bits (169), Expect = 3.70e-11 Identity = 33/60 (55.00%), Postives = 43/60 (71.67%), Query Frame = 0
BLAST of IVF0012669 vs. NCBI nr
Match: KAA0039528.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] >TYK15281.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 67.4 bits (163), Expect = 2.44e-10 Identity = 30/53 (56.60%), Postives = 42/53 (79.25%), Query Frame = 0
BLAST of IVF0012669 vs. NCBI nr
Match: KAE8650876.1 (hypothetical protein Csa_002497, partial [Cucumis sativus]) HSP 1 Score: 63.5 bits (153), Expect = 4.36e-10 Identity = 33/69 (47.83%), Postives = 48/69 (69.57%), Query Frame = 0
BLAST of IVF0012669 vs. NCBI nr
Match: XP_030505320.1 (uncharacterized protein LOC115720307 [Cannabis sativa]) HSP 1 Score: 64.7 bits (156), Expect = 2.22e-09 Identity = 32/59 (54.24%), Postives = 40/59 (67.80%), Query Frame = 0
BLAST of IVF0012669 vs. TAIR 10
Match: AT3G30770.1 (Eukaryotic aspartyl protease family protein ) HSP 1 Score: 42.0 bits (97), Expect = 3.6e-04 Identity = 28/80 (35.00%), Postives = 43/80 (53.75%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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