IVF0012198.1 (mRNA) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGATTCAAACATCGTCATCTTCGTCATCAGCGTCATCGTCATACTGGGTATCATCATCCTCCGGCAAAGAAGGGAGATTCCAACAGGCAGCGACGTACGGTCAGGCCGGGTGAAGCAAGAACAAAGGGTGGGCATTTGCTAGTCCGATGAGAGCTTTCATGAAGCCATCGTCTTCATCATCAGAAGGGAAAAGAGAATCATCGGAGAAAAATTCGACTCCAAATTTGGACGCCATTCCTTCATTGCTGGCCGTAAGAATCTGA ATGATTCAAACATCGTCATCTTCGTCATCAGCGTCATCGTCATACTGGGTATCATCATCCTCCGGCAAAGAAGGGAGATTCCAACAGGCAGCGACGTACGGTCAGGCCGGTCCGATGAGAGCTTTCATGAAGCCATCGTCTTCATCATCAGAAGGGAAAAGAGAATCATCGGAGAAAAATTCGACTCCAAATTTGGACGCCATTCCTTCATTGCTGGCCGTAAGAATCTGA ATGATTCAAACATCGTCATCTTCGTCATCAGCGTCATCGTCATACTGGGTATCATCATCCTCCGGCAAAGAAGGGAGATTCCAACAGGCAGCGACGTACGGTCAGGCCGGTCCGATGAGAGCTTTCATGAAGCCATCGTCTTCATCATCAGAAGGGAAAAGAGAATCATCGGAGAAAAATTCGACTCCAAATTTGGACGCCATTCCTTCATTGCTGGCCGTAAGAATCTGA MIQTSSSSSSASSSYWVSSSSGKEGRFQQAATYGQAGPMRAFMKPSSSSSEGKRESSEKNSTPNLDAIPSLLAVRI Homology
BLAST of IVF0012198.1 vs. ExPASy TrEMBL
Match: A0A5A7U5P3 (Serine-rich adhesin for platelets OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold209G001140 PE=4 SV=1) HSP 1 Score: 120.2 bits (300), Expect = 3.8e-24 Identity = 73/86 (84.88%), Postives = 74/86 (86.05%), Query Frame = 0
BLAST of IVF0012198.1 vs. ExPASy TrEMBL
Match: A0A1S3AY44 (uncharacterized protein DDB_G0271670 OS=Cucumis melo OX=3656 GN=LOC103483856 PE=4 SV=1) HSP 1 Score: 120.2 bits (300), Expect = 3.8e-24 Identity = 73/86 (84.88%), Postives = 74/86 (86.05%), Query Frame = 0
BLAST of IVF0012198.1 vs. ExPASy TrEMBL
Match: A0A0A0L7Y1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G159440 PE=4 SV=1) HSP 1 Score: 116.3 bits (290), Expect = 5.5e-23 Identity = 73/87 (83.91%), Postives = 74/87 (85.06%), Query Frame = 0
BLAST of IVF0012198.1 vs. ExPASy TrEMBL
Match: A0A5D3C909 (Putative serine-rich protein-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1737G00480 PE=3 SV=1) HSP 1 Score: 112.8 bits (281), Expect = 6.1e-22 Identity = 69/83 (83.13%), Postives = 70/83 (84.34%), Query Frame = 0
BLAST of IVF0012198.1 vs. ExPASy TrEMBL
Match: A0A6J1GU50 (uncharacterized protein LOC111457510 OS=Cucurbita moschata OX=3662 GN=LOC111457510 PE=4 SV=1) HSP 1 Score: 100.1 bits (248), Expect = 4.1e-18 Identity = 66/86 (76.74%), Postives = 67/86 (77.91%), Query Frame = 0
BLAST of IVF0012198.1 vs. NCBI nr
Match: XP_008438897.1 (PREDICTED: uncharacterized protein DDB_G0271670 [Cucumis melo] >KAA0049506.1 serine-rich adhesin for platelets [Cucumis melo var. makuwa] >TYK16186.1 serine-rich adhesin for platelets [Cucumis melo var. makuwa]) HSP 1 Score: 119 bits (299), Expect = 3.30e-30 Identity = 73/86 (84.88%), Postives = 74/86 (86.05%), Query Frame = 0
BLAST of IVF0012198.1 vs. NCBI nr
Match: TYK07772.1 (putative serine-rich protein-like protein [Cucumis melo var. makuwa]) HSP 1 Score: 112 bits (280), Expect = 1.37e-29 Identity = 69/83 (83.13%), Postives = 70/83 (84.34%), Query Frame = 0
BLAST of IVF0012198.1 vs. NCBI nr
Match: XP_004134219.3 (uncharacterized protein DDB_G0271670 [Cucumis sativus] >KAE8650397.1 hypothetical protein Csa_009537 [Cucumis sativus]) HSP 1 Score: 115 bits (289), Expect = 9.45e-29 Identity = 73/87 (83.91%), Postives = 74/87 (85.06%), Query Frame = 0
BLAST of IVF0012198.1 vs. NCBI nr
Match: KAG7018602.1 (hypothetical protein SDJN02_20472, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 100 bits (249), Expect = 4.48e-23 Identity = 66/86 (76.74%), Postives = 68/86 (79.07%), Query Frame = 0
BLAST of IVF0012198.1 vs. NCBI nr
Match: KAG6582206.1 (hypothetical protein SDJN03_22208, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 100 bits (249), Expect = 4.54e-23 Identity = 66/86 (76.74%), Postives = 68/86 (79.07%), Query Frame = 0
BLAST of IVF0012198.1 vs. TAIR 10
Match: AT5G49100.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G06868.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 47.4 bits (111), Expect = 6.1e-06 Identity = 42/90 (46.67%), Postives = 52/90 (57.78%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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