IVF0005786 (gene) Melon (IVF77) v1

Overview


Name	IVF0005786
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	homeobox protein knotted-1-like LET6
Location	chr08: 2596691 .. 2600323 (-)
RNA-Seq Expression	IVF0005786
Synteny	IVF0005786

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTATCATGCTTTCACCTTACTTGGGCAGTGCTAAGTTATAGGTTAGAGGTTTGGTTTTTCCCTCTGTATTGCCTTGCCGTGTGCTGCCTCTCCTCGTCTCTTTTCCCTCGATTCCATCGTTCTTTCTTCTCTCTCTCTCTCATTCTTTTTGCCAGTAATGGCAGTGCATCATCAGTGCCACTGCATTAAAAGAGCGAGAAGAGAGTTTTCATCGGGAAGGTAAAAAATTAAAAAAGATAATACACACAACATCAAAACTTTTTTCCCCACTATCTACTTCCCTTACAAACCCTAATTTTGTTTCTTACATTACAAACAACTCTCCCAACAAAAAAAAAAAGAAAAAAAAAACCCTTCTGATTTTATAACTGAGATCTTTCTTACAAAGTATCACTATTTGTTTCTTTTTAAAAAACCCCCCCAAAAGCCTCAACCTTTTCGAAGCTAAAATCCCGGGAGTGGGGATTTATATAATACCAAAAGAGAGAGAGAATTTTATAATTTACTACAAATTTGGGGTTCGGAGAGTTATTCTTATTTCAAATGGATGGTCCAAGTGGGAATTGTTCTGGAGGTATGATGAATTTTGGTGATCAAAATAACAACAACAACAACAACAATAATGGGTTATGTTCTATGATGATGATGATGCCGTTAATCTCTGCTTCTCAACAAGGTGGAGATGGTTCTTCATGTACTCCATTTCTTCCTCTTCCTCCTCCCAATTACAACAACACCAACAACAACAATAATTCTATTTGTAATTACTTCATGGATGAAACCAACAACAACAACAATAACAACAGCGAGAGTAGTAATGGAGCCAATTCTTGTTGTGAAGTCAAGGCTAAAATCATGGCTCATCCTCACTACCACCGTCTTCTTACTGCCTATGTCAATTGTCGTAAGGTATTAATTAAATATATATTATGATTTAAATAATTAATTAATTAAATTATAGATCTGAATTTTTATTTTTAATTTTTTTGTCATGTAGGTGGGGGCGCCGCCGGAAGTGGTGGCACGGCTTGAAGAAGCGTGTGCAAGTGCGGTGACAATGAGTAGTGGTAATAATGGTGGTGGGTGTATTGGGGAAGATCCAGCGCTTGATCAGTTTATGGAAGCTTATTGTGAGATGCTTACTAAATATGAACAAGAACTTTCCAAACCCTTTAGAGATGCTATGCTCTTTCTTCAACGAATTGACTCTCAATTCAAAGCTCTCTCTATTTCCTCCTCTCATCTCCCTCCAGGTATTATTTATTATTATTATTATTATTATTATTTTTCACTATCTTGTTATTTTGCATGTAGTTTAATTTATAATTATTTTCGTTATTATAGTTTTTAATTATGATTTGTTGATCCCTAAAGTGGATGCATTTGCCTCTTTCTTTTTTCTCTTTCTCATTGCCTTTTATTGATTTATTTATTTCTGGCTAGGGCTTCTATGAAACCTTTGATTTGTGTAGTCTTTGTGTGTATCTTACTTCCTTTTTTTTGGCTGTTCGGTCAATCTTTTTTTATTTGAAGTTTATTTTGTGCTTAATAACTAGGAGAGATTAATTTGAGGAGTTTGATTAATTAATATGGAGACGTGTTGTTCCTAGGGTTTACAACTTTTTCAATATAATGTCTATATATTTGCTTTTCACATTGTGTTTAATGCAAAGTTTTTAAACTTGCTTGTTAATATGGTTTTTTTTGTCTCGAAGTATGTGTTAACTGTCAAGTAGAGAAATGCAGGAATCTACGTGTAGGCGTTGGTTATGAGATGATGCCATTAGGAGATACATTGTTATTTTTTTTTCACCTGATTACATCAAATGTTATGTATTTCATCTTACTTTTGTTATTTGTGGTTTTTGCATTTATATTGGCATTATTATTGTACATTGGATTTAATGTCCTTTAACTTCAATAATTTTCCATGTGGTTCATTCGAACTTTTTCGTTCTTGAAATGCAACGTTTTTCAATACTGTTGTGATTATGGAAGTGAGGATTTGGTTTTTTGTGTTGATTATTTGAATGTTTACGACGGGACTAGTTTTGGGAGTGGTATTTAGGATTCAAGCGTTTAAATTGAGAGGTTGACATGGATCAAAAATATGAATTTCGGTTGTTTTTATTGTTTCTTGAAGTGAACTCTTGAGAAAATTCAGTGATATGTGGGCTTAAATGAAAATGTATATATTATTTTATTCTGGCCATCTCATTGAATATTTTTCTGTTGTATAACTATCTTAAGATTTTGCATGAACGAAAATGTTATTTATAAACGACGATAAGCCTACATTTTTTATTGTAATTTCTTGCTTTGTGTATTGCATAATTATATTTGTTTAGGATATACACGATCTTTTTTTTTTTTGTTTCTTGTTTGTGATAGTTTTTCAATGTTTTGATAAAATTCTGGGGAATCATTTCTTGGAATAGAATTGTAGGTGTTGACTGAAATACAATATGAAAGTACAATTTTTTGGTTTGTTTTGTTATGTTTTATGCTATTACTTTTTGTTTAGATTTGTTCCAATGTCCCATGCAACATGAAAAACACAACTAAAATACTGTCTATGTTGTCATTTTCTTCTGAAAAATGGTTCATTCTCATTCTATAAGAAGAGGCCCCCCTCTTCAAACAACAACCCTAGGAGAGACACATTACATAAATTCTGGATCTTTTTTCCCTATATGTATGGGATAAGTTCTGTTACCCAATAAAAATCTACCAAAAAAAAAAAAATCTAATTTCATTGTGTAGCATAAGCTTCTGTTCTTATCCAAGTGAGCCATTCAATAATACATGCAGCTGGGACTAGAAAATACTTGTGCATTTTGATCATATTGTGGTATTTTGATGGCTGTTTTATTGTTTTGTCATTGGCTGACATTTATTGGACACGTCACATAGCTTGTGGCGAGGCGTTTGATAGGAACGGATCATCTGAAGAGGAAGTTGATATCAATGGGCACTCAATCGACCCACAAGCGGAAGATCGTGAACTGAAAGGTCAGCTTCTACGCAAATACAGCGGATACTTGGGCAGTTTGAAGCAAGAATTCATGAAGAAAAGGAAGAAAGGGAAGTTACCTAAGGAAGCTAGACAACAACTTCTGGATTGGTGGAGTAGACATTACAAATGGCCGTATCCATCTGTATGTCTAATTCAATTAATTCTTCTATTTAGTTGATTGAACATACAATAATTTGGTCAAATATATAATTCAATTTGTTATGACACAGGAATCACAGAAGTTGGCTTTAGCTCAATCAACTGGGTTAGATCAAAAGCAAATCAACAATTGGTTCATTAACCAAAGAAAAAGACACTGGAAACCATCAGAAGATATGCAATTTGTGGTGATGGATGCTGCTCATCCACAGTATTACATGGATGCTGTCTTAGGGAATCCTTTTCCCTTGGATATATCCCCTGCTCTACTTTAATTTTAATTAAATTTGAATATTGTTATGATTTTAATATAAAGTAACACTTATATAAATATGATGGTGGTGGTGTTGATGGCCTTTTTTTTAAAAAAAAAATTTTTACTCTCTTTTTTGTGTATGAATGTTTGAGGAATGGTTCAACTGGTTTGACAGAACATATATATATATATATATATAT

mRNA sequence

ATTTATCATGCTTTCACCTTACTTGGGCAGTGCTAAGTTATAGGTTAGAGGTTTGGTTTTTCCCTCTGTATTGCCTTGCCGTGTGCTGCCTCTCCTCGTCTCTTTTCCCTCGATTCCATCGTTCTTTCTTCTCTCTCTCTCTCATTCTTTTTGCCAGTAATGGCAGTGCATCATCAGTGCCACTGCATTAAAAGAGCGAGAAGAGAGTTTTCATCGGGAAGGTAAAAAATTAAAAAAGATAATACACACAACATCAAAACTTTTTTCCCCACTATCTACTTCCCTTACAAACCCTAATTTTGTTTCTTACATTACAAACAACTCTCCCAACAAAAAAAAAAAGAAAAAAAAAACCCTTCTGATTTTATAACTGAGATCTTTCTTACAAAGTATCACTATTTGTTTCTTTTTAAAAAACCCCCCCAAAAGCCTCAACCTTTTCGAAGCTAAAATCCCGGGAGTGGGGATTTATATAATACCAAAAGAGAGAGAGAATTTTATAATTTACTACAAATTTGGGGTTCGGAGAGTTATTCTTATTTCAAATGGATGGTCCAAGTGGGAATTGTTCTGGAGGTATGATGAATTTTGGTGATCAAAATAACAACAACAACAACAACAATAATGGGTTATGTTCTATGATGATGATGATGCCGTTAATCTCTGCTTCTCAACAAGGTGGAGATGGTTCTTCATGTACTCCATTTCTTCCTCTTCCTCCTCCCAATTACAACAACACCAACAACAACAATAATTCTATTTGTAATTACTTCATGGATGAAACCAACAACAACAACAATAACAACAGCGAGAGTAGTAATGGAGCCAATTCTTGTTGTGAAGTCAAGGCTAAAATCATGGCTCATCCTCACTACCACCGTCTTCTTACTGCCTATGTCAATTGTCGTAAGGTGGGGGCGCCGCCGGAAGTGGTGGCACGGCTTGAAGAAGCGTGTGCAAGTGCGGTGACAATGAGTAGTGGTAATAATGGTGGTGGGTGTATTGGGGAAGATCCAGCGCTTGATCAGTTTATGGAAGCTTATTGTGAGATGCTTACTAAATATGAACAAGAACTTTCCAAACCCTTTAGAGATGCTATGCTCTTTCTTCAACGAATTGACTCTCAATTCAAAGCTCTCTCTATTTCCTCCTCTCATCTCCCTCCAGCTTGTGGCGAGGCGTTTGATAGGAACGGATCATCTGAAGAGGAAGTTGATATCAATGGGCACTCAATCGACCCACAAGCGGAAGATCGTGAACTGAAAGGTCAGCTTCTACGCAAATACAGCGGATACTTGGGCAGTTTGAAGCAAGAATTCATGAAGAAAAGGAAGAAAGGGAAGTTACCTAAGGAAGCTAGACAACAACTTCTGGATTGGTGGAGTAGACATTACAAATGGCCGTATCCATCTGAATCACAGAAGTTGGCTTTAGCTCAATCAACTGGGTTAGATCAAAAGCAAATCAACAATTGGTTCATTAACCAAAGAAAAAGACACTGGAAACCATCAGAAGATATGCAATTTGTGGTGATGGATGCTGCTCATCCACAGTATTACATGGATGCTGTCTTAGGGAATCCTTTTCCCTTGGATATATCCCCTGCTCTACTTTAATTTTAATTAAATTTGAATATTGTTATGATTTTAATATAAAGTAACACTTATATAAATATGATGGTGGTGGTGTTGATGGCCTTTTTTTTAAAAAAAAAATTTTTACTCTCTTTTTTGTGTATGAATGTTTGAGGAATGGTTCAACTGGTTTGACAGAACATATATATATATATATATATAT

Coding sequence (CDS)

ATGGATGGTCCAAGTGGGAATTGTTCTGGAGGTATGATGAATTTTGGTGATCAAAATAACAACAACAACAACAACAATAATGGGTTATGTTCTATGATGATGATGATGCCGTTAATCTCTGCTTCTCAACAAGGTGGAGATGGTTCTTCATGTACTCCATTTCTTCCTCTTCCTCCTCCCAATTACAACAACACCAACAACAACAATAATTCTATTTGTAATTACTTCATGGATGAAACCAACAACAACAACAATAACAACAGCGAGAGTAGTAATGGAGCCAATTCTTGTTGTGAAGTCAAGGCTAAAATCATGGCTCATCCTCACTACCACCGTCTTCTTACTGCCTATGTCAATTGTCGTAAGGTGGGGGCGCCGCCGGAAGTGGTGGCACGGCTTGAAGAAGCGTGTGCAAGTGCGGTGACAATGAGTAGTGGTAATAATGGTGGTGGGTGTATTGGGGAAGATCCAGCGCTTGATCAGTTTATGGAAGCTTATTGTGAGATGCTTACTAAATATGAACAAGAACTTTCCAAACCCTTTAGAGATGCTATGCTCTTTCTTCAACGAATTGACTCTCAATTCAAAGCTCTCTCTATTTCCTCCTCTCATCTCCCTCCAGCTTGTGGCGAGGCGTTTGATAGGAACGGATCATCTGAAGAGGAAGTTGATATCAATGGGCACTCAATCGACCCACAAGCGGAAGATCGTGAACTGAAAGGTCAGCTTCTACGCAAATACAGCGGATACTTGGGCAGTTTGAAGCAAGAATTCATGAAGAAAAGGAAGAAAGGGAAGTTACCTAAGGAAGCTAGACAACAACTTCTGGATTGGTGGAGTAGACATTACAAATGGCCGTATCCATCTGAATCACAGAAGTTGGCTTTAGCTCAATCAACTGGGTTAGATCAAAAGCAAATCAACAATTGGTTCATTAACCAAAGAAAAAGACACTGGAAACCATCAGAAGATATGCAATTTGTGGTGATGGATGCTGCTCATCCACAGTATTACATGGATGCTGTCTTAGGGAATCCTTTTCCCTTGGATATATCCCCTGCTCTACTTTAA

Protein sequence

MDGPSGNCSGGMMNFGDQNNNNNNNNNGLCSMMMMMPLISASQQGGDGSSCTPFLPLPPPNYNNTNNNNNSICNYFMDETNNNNNNNSESSNGANSCCEVKAKIMAHPHYHRLLTAYVNCRKVGAPPEVVARLEEACASAVTMSSGNNGGGCIGEDPALDQFMEAYCEMLTKYEQELSKPFRDAMLFLQRIDSQFKALSISSSHLPPACGEAFDRNGSSEEEVDINGHSIDPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQKLALAQSTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDAAHPQYYMDAVLGNPFPLDISPALL

Homology

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BLAST of IVF0005786 vs. ExPASy Swiss-Prot
Match: O22299 (Homeobox protein knotted-1-like LET6 OS=Solanum lycopersicum OX=4081 GN=LET6 PE=2 SV=1)

HSP 1 Score: 464.2 bits (1193), Expect = 1.4e-129
Identity = 255/369 (69.11%), Postives = 288/369 (78.05%), Query Frame = 0


Query: 3   GPSGNCSGG---MMNFGDQNNNNNNNNNGLCSMMMMMPLISASQQGGDGSSCTP----FL 62
           G SGN S     MM +GD  NNNNNN NG                 G+ + C P     +
Sbjct: 4   GSSGNTSTSCLMMMGYGDHENNNNNNGNG------------NGNGNGNVTICAPPMMMMM 63

Query: 63  PLPPPNYNNTNN----NNNSICNYFMDETNNNNNNNSESSNGANSCCEVKAKIMAHPHYH 122
           P PPP+  N NN    NNN +   FMD  NNNNNN  E +N ++S   +K+KIMAHPHYH
Sbjct: 64  PPPPPSLTNNNNAETSNNNILFLPFMD--NNNNNNPQEDNNSSSS--SIKSKIMAHPHYH 123

Query: 123 RLLTAYVNCRKVGAPPEVVARLEEACASAVTM--SSGNNGGGCIGEDPALDQFMEAYCEM 182
           RLLTAY+NC+K+GAPPEVVARLEE CA++ TM  SS ++GGG IGEDPALDQFMEAYCEM
Sbjct: 124 RLLTAYLNCQKIGAPPEVVARLEEICATSATMGRSSSSSGGGIIGEDPALDQFMEAYCEM 183

Query: 183 LTKYEQELSKPFRDAMLFLQRIDSQFKALSI--SSSHLPPACGEAFDRNGSSEEEVDING 242
           LTKYEQELSKPF++AM+FL RI+ QFKAL++  +SSH   A GEA DRNGSS+EEVD+N 
Sbjct: 184 LTKYEQELSKPFKEAMVFLSRIECQFKALTLAPNSSH-ESALGEAMDRNGSSDEEVDVNN 243

Query: 243 HSIDPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPY 302
             IDPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQL+DWW RH KWPY
Sbjct: 244 SFIDPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLVDWWLRHIKWPY 303

Query: 303 PSESQKLALAQSTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDAAHPQYYMDAVLGNPF 357
           PSESQKLALA+STGLDQKQINNWFINQRKRHWKPSEDMQFVVMDAAHP YYMD VL N F
Sbjct: 304 PSESQKLALAESTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDAAHPHYYMDNVLANHF 355

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BLAST of IVF0005786 vs. ExPASy Swiss-Prot
Match: P46608 (Homeobox protein SBH1 OS=Glycine max OX=3847 GN=H1 PE=2 SV=1)

HSP 1 Score: 443.0 bits (1138), Expect = 3.3e-123
Identity = 252/391 (64.45%), Postives = 291/391 (74.42%), Query Frame = 0


Query: 1   MDGPSGNCSGG--MMNFGDQNNNNNNNNNGLCSMMMMMPLISASQQGG------------ 60
           M+G S + +G   ++ FG+      NN+ GLC  M MMPL+++   G             
Sbjct: 1   MEGGSSSSNGTSYLLAFGE------NNSGGLCP-MTMMPLVTSHHAGHHPINPSNNNNVN 60

Query: 61  ---------DGSSCTPFLPLPPPNYNN-----TNNNNNSICNYFMDETNN-----NNNNN 120
                      S+ TP + L   + NN      NNNN  +  YFM+  ++     NNNNN
Sbjct: 61  TNCLFIPNCSNSTGTPSIMLHNNHNNNKTDDDDNNNNTGLGYYFMESDHHHHHHGNNNNN 120

Query: 121 SESSNGANSCCEVKAKIMAHPHYHRLLTAYVNCRKVGAPPEVVARLEEACASAVTMSSGN 180
             SS+ ++S   VKAKIMAHPHYHRLL AYVNC+KVGAPPEVVARLEEACASA TM+ G+
Sbjct: 121 GSSSSSSSSA--VKAKIMAHPHYHRLLAAYVNCQKVGAPPEVVARLEEACASAATMAGGD 180

Query: 181 --NGGGCIGEDPALDQFMEAYCEMLTKYEQELSKPFRDAMLFLQRIDSQFKALSISSSHL 240
              G  CIGEDPALDQFMEAYCEMLTKYEQELSKP ++AMLFLQRI+ QFK L+ISSS  
Sbjct: 181 AAAGSSCIGEDPALDQFMEAYCEMLTKYEQELSKPLKEAMLFLQRIECQFKNLTISSSDF 240

Query: 241 PPACGEAFDRNGSSEEEVDINGHSIDPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKG 300
             A  E  DRNGSSEE+VD++ + IDPQAEDR+LKGQLLRKYSGYLGSLKQEFMKKRKKG
Sbjct: 241 --ASNEGGDRNGSSEEDVDLH-NMIDPQAEDRDLKGQLLRKYSGYLGSLKQEFMKKRKKG 300

Query: 301 KLPKEARQQLLDWWSRHYKWPYPSESQKLALAQSTGLDQKQINNWFINQRKRHWKPSEDM 357
           KLPKEARQQLL+WW+RHYKWPYPSESQKLALA+STGLDQKQINNWFINQRKRHWKPSEDM
Sbjct: 301 KLPKEARQQLLEWWNRHYKWPYPSESQKLALAESTGLDQKQINNWFINQRKRHWKPSEDM 360

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BLAST of IVF0005786 vs. ExPASy Swiss-Prot
Match: Q38874 (Homeobox protein SHOOT MERISTEMLESS OS=Arabidopsis thaliana OX=3702 GN=STM PE=1 SV=2)

HSP 1 Score: 410.2 bits (1053), Expect = 2.4e-113
Identity = 242/388 (62.37%), Postives = 276/388 (71.13%), Query Frame = 0


Query: 1   MDGPSGNCSGGMMNFGDQNNNNNNNNNGLCSMMMMMPLISAS-----------QQGGDG- 60
           M+  S + S  M   GD      N++  +C MMMMMP I  S           QQ  DG 
Sbjct: 1   MESGSNSTSCPMAFAGD------NSDGPMCPMMMMMPPIMTSHQHHGHDHQHQQQEHDGY 60

Query: 61  -------SSCTPFLP--LPPPNYNN--TNNNNNSIC--NYFMDETNNNN--NNNSESSNG 120
                   S + FL    PP    N   ++++ S C   Y + E ++N          + 
Sbjct: 61  AYQSHHQQSSSLFLQSLAPPQGTKNKVASSSSPSSCAPAYSLMEIHHNEIVAGGINPCSS 120

Query: 121 ANSCCEVKAKIMAHPHYHRLLTAYVNCRKVGAPPEVVARLEEACASAVTMSSGNNGGGCI 180
           ++S   VKAKIMAHPHYHRLL AYVNC+KVGAPPEVVARLEEAC+SA   ++     GC+
Sbjct: 121 SSSSASVKAKIMAHPHYHRLLAAYVNCQKVGAPPEVVARLEEACSSAAAAAASMGPTGCL 180

Query: 181 GEDPALDQFMEAYCEMLTKYEQELSKPFRDAMLFLQRIDSQFKALSISSSHLPPACGE-A 240
           GEDP LDQFMEAYCEML KYEQELSKPF++AM+FLQR++ QFK+LS+SS       GE A
Sbjct: 181 GEDPGLDQFMEAYCEMLVKYEQELSKPFKEAMVFLQRVECQFKSLSLSSPSSFSGYGETA 240

Query: 241 FDR--NGSSEEEVDINGHSIDPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKE 300
            DR  NGSSEEEVD+N   +DPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKE
Sbjct: 241 IDRNNNGSSEEEVDMNNEFVDPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKE 300

Query: 301 ARQQLLDWWSRHYKWPYPSESQKLALAQSTGLDQKQINNWFINQRKRHWKPSEDMQFVVM 357
           ARQQLLDWWSRHYKWPYPSE QKLALA+STGLDQKQINNWFINQRKRHWKPSEDMQFVVM
Sbjct: 301 ARQQLLDWWSRHYKWPYPSEQQKLALAESTGLDQKQINNWFINQRKRHWKPSEDMQFVVM 360

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BLAST of IVF0005786 vs. ExPASy Swiss-Prot
Match: Q9M6D9 (Homeobox protein SHOOT MERISTEMLESS OS=Brassica oleracea OX=3712 GN=STM PE=2 SV=1)

HSP 1 Score: 388.7 bits (997), Expect = 7.3e-107
Identity = 229/382 (59.95%), Postives = 259/382 (67.80%), Query Frame = 0


Query: 1   MDGPSGNCSGGMMNFGDQNNNNNNNNNGLC-SMMMMMPLISASQQ--GGDGS-------- 60
           M+  S + S  M   GD      N++  +C  MMMMMP+I++ QQ  G D          
Sbjct: 1   MESGSNSTSCPMAFAGD------NSDGPMCPMMMMMMPVITSHQQHHGHDQQHQHQQQHD 60

Query: 61  ----------SCTPFLPLPPPNYNNTNNNNNSICN--------YFMDETNNNNNNNSESS 120
                     S   FL    P      N   S C+         FM+  + N        
Sbjct: 61  GYAYQSHHQHSSLLFLQSLTPPSQEAKNKVRSSCSPSSGAPAYSFMEINHQNELLAGGLQ 120

Query: 121 NGANSCCEVKAKIMAHPHYHRLLTAYVNCRKVGAPPEVVARLEEACASAVTMSSGNNGGG 180
           +   S   VKAKIMAHPHYHRLL AYVNC+KVGAPPEV ARLEE C+SA   ++     G
Sbjct: 121 SPVLSSLLVKAKIMAHPHYHRLLLAYVNCQKVGAPPEVQARLEETCSSAAAAAASMGPTG 180

Query: 181 CIGEDPALDQFMEAYCEMLTKYEQELSKPFRDAMLFLQRIDSQFKALSISSSHLPPACGE 240
            +GEDP LDQFMEAYCEML KYEQELSKPF++AM+FLQ ++ QFK+LS+SS         
Sbjct: 181 SLGEDPGLDQFMEAYCEMLVKYEQELSKPFKEAMVFLQHVECQFKSLSLSSPSSLGYGEA 240

Query: 241 AFDR--NGSSEEEVDINGHSIDPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPK 300
           A +R  NGSSEEEVD+N   +DPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPK
Sbjct: 241 AIERNNNGSSEEEVDMNNEFVDPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPK 300

Query: 301 EARQQLLDWWSRHYKWPYPSESQKLALAQSTGLDQKQINNWFINQRKRHWKPSEDMQFVV 351
           EARQQLLDWWSRHYKWPYPSE QKLALA+STGLDQKQINNWFINQRKRHWKPSEDMQFVV
Sbjct: 301 EARQQLLDWWSRHYKWPYPSEQQKLALAESTGLDQKQINNWFINQRKRHWKPSEDMQFVV 360

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BLAST of IVF0005786 vs. ExPASy Swiss-Prot
Match: Q41853 (Homeobox protein rough sheath 1 OS=Zea mays OX=4577 GN=RS1 PE=2 SV=1)

HSP 1 Score: 291.6 bits (745), Expect = 1.2e-77
Identity = 150/260 (57.69%), Postives = 189/260 (72.69%), Query Frame = 0


Query: 100 VKAKIMAHPHYHRLLTAYVNCRKVGAPPEVVARLEEACASAVTMSSGNNGGGCIGEDPAL 159
           +KAKI+AHP Y  LL AY++C+KVGAPP+V+ RL    A     ++G +       DP L
Sbjct: 90  IKAKIVAHPQYSALLAAYLDCQKVGAPPDVLERLTAMAAKLDASAAGRHE----PRDPEL 149

Query: 160 DQFMEAYCEMLTKYEQELSKPFRDAMLFLQRIDSQFKALS----ISSSHLPPACGEAFDR 219
           DQFMEAYC ML KY +EL++P  +AM FL+R+++Q   +S     SS+ L  A G++ + 
Sbjct: 150 DQFMEAYCNMLVKYREELTRPIDEAMEFLKRVEAQLDCISGGGGSSSARLSLADGKS-EG 209

Query: 220 NGSSEEEVDINGH-----SIDPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKE 279
            GSSE+++D NG       IDP+AED+ELK QLL+KYSGYL SL+QEF KK+KKGKLPKE
Sbjct: 210 VGSSEDDMDPNGRENDPPEIDPRAEDKELKYQLLKKYSGYLSSLRQEFSKKKKKGKLPKE 269

Query: 280 ARQQLLDWWSRHYKWPYPSESQKLALAQSTGLDQKQINNWFINQRKRHWKPSEDMQFVVM 339
           ARQ+LL WW  HYKWPYPSE++K+ALA+STGLDQKQINNWFINQRKRHWKPSEDM FV+M
Sbjct: 270 ARQKLLHWWELHYKWPYPSETEKIALAESTGLDQKQINNWFINQRKRHWKPSEDMPFVMM 329

Query: 340 DAAHPQYYMDAVLGNPFPLD 351
           +  HPQ      +  PF  D
Sbjct: 330 EGFHPQNAAALYMDGPFMRD 344

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BLAST of IVF0005786 vs. ExPASy TrEMBL
Match: A0A1S3B0X4 (homeobox protein knotted-1-like LET6 OS=Cucumis melo OX=3656 GN=LOC103484637 PE=3 SV=1)

HSP 1 Score: 719.5 bits (1856), Expect = 6.7e-204
Identity = 356/356 (100.00%), Postives = 356/356 (100.00%), Query Frame = 0


Query: 1   MDGPSGNCSGGMMNFGDQNNNNNNNNNGLCSMMMMMPLISASQQGGDGSSCTPFLPLPPP 60
           MDGPSGNCSGGMMNFGDQNNNNNNNNNGLCSMMMMMPLISASQQGGDGSSCTPFLPLPPP
Sbjct: 1   MDGPSGNCSGGMMNFGDQNNNNNNNNNGLCSMMMMMPLISASQQGGDGSSCTPFLPLPPP 60

Query: 61  NYNNTNNNNNSICNYFMDETNNNNNNNSESSNGANSCCEVKAKIMAHPHYHRLLTAYVNC 120
           NYNNTNNNNNSICNYFMDETNNNNNNNSESSNGANSCCEVKAKIMAHPHYHRLLTAYVNC
Sbjct: 61  NYNNTNNNNNSICNYFMDETNNNNNNNSESSNGANSCCEVKAKIMAHPHYHRLLTAYVNC 120

Query: 121 RKVGAPPEVVARLEEACASAVTMSSGNNGGGCIGEDPALDQFMEAYCEMLTKYEQELSKP 180
           RKVGAPPEVVARLEEACASAVTMSSGNNGGGCIGEDPALDQFMEAYCEMLTKYEQELSKP
Sbjct: 121 RKVGAPPEVVARLEEACASAVTMSSGNNGGGCIGEDPALDQFMEAYCEMLTKYEQELSKP 180

Query: 181 FRDAMLFLQRIDSQFKALSISSSHLPPACGEAFDRNGSSEEEVDINGHSIDPQAEDRELK 240
           FRDAMLFLQRIDSQFKALSISSSHLPPACGEAFDRNGSSEEEVDINGHSIDPQAEDRELK
Sbjct: 181 FRDAMLFLQRIDSQFKALSISSSHLPPACGEAFDRNGSSEEEVDINGHSIDPQAEDRELK 240

Query: 241 GQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQKLALAQST 300
           GQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQKLALAQST
Sbjct: 241 GQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQKLALAQST 300

Query: 301 GLDQKQINNWFINQRKRHWKPSEDMQFVVMDAAHPQYYMDAVLGNPFPLDISPALL 357
           GLDQKQINNWFINQRKRHWKPSEDMQFVVMDAAHPQYYMDAVLGNPFPLDISPALL
Sbjct: 301 GLDQKQINNWFINQRKRHWKPSEDMQFVVMDAAHPQYYMDAVLGNPFPLDISPALL 356

[Close]

BLAST of IVF0005786 vs. ExPASy TrEMBL
Match: A0A0A0KJU4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G513430 PE=3 SV=1)

HSP 1 Score: 685.6 bits (1768), Expect = 1.1e-193
Identity = 346/356 (97.19%), Postives = 347/356 (97.47%), Query Frame = 0


Query: 1   MDGPSGNCSGGMMNFGDQNNNNNNNNNGLCSMMMMMPLISASQQGGDGSSCTPFLPLPPP 60
           MD PSGNCSGGMMNFGDQ NNNNNNNNGLCSMMMMMPLISASQQGGDGSSCTPFLPLPPP
Sbjct: 1   MDVPSGNCSGGMMNFGDQ-NNNNNNNNGLCSMMMMMPLISASQQGGDGSSCTPFLPLPPP 60

Query: 61  NYNNTNNNNNSICNYFMDETNNNNNNNSESSNGANSCCEVKAKIMAHPHYHRLLTAYVNC 120
           NYN  NNNN SICNYFMDETNNNNN+  ESSNGANSCCEVKAKIMAHPHYHRLL AYVNC
Sbjct: 61  NYN--NNNNTSICNYFMDETNNNNND--ESSNGANSCCEVKAKIMAHPHYHRLLAAYVNC 120

Query: 121 RKVGAPPEVVARLEEACASAVTMSSGNNGGGCIGEDPALDQFMEAYCEMLTKYEQELSKP 180
           RKVGAPPEVVARLEEACASAVTMSSGNNGGGCIGEDPALDQFMEAYCEMLTKYEQELSKP
Sbjct: 121 RKVGAPPEVVARLEEACASAVTMSSGNNGGGCIGEDPALDQFMEAYCEMLTKYEQELSKP 180

Query: 181 FRDAMLFLQRIDSQFKALSISSSHLPPACGEAFDRNGSSEEEVDINGHSIDPQAEDRELK 240
           FRDAMLFLQRIDSQFKALSISSSHLPPACGEAFDRNGSSEEEVDINGHSIDPQAEDRELK
Sbjct: 181 FRDAMLFLQRIDSQFKALSISSSHLPPACGEAFDRNGSSEEEVDINGHSIDPQAEDRELK 240

Query: 241 GQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQKLALAQST 300
           GQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQKLALAQST
Sbjct: 241 GQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQKLALAQST 300

Query: 301 GLDQKQINNWFINQRKRHWKPSEDMQFVVMDAAHPQYYMDAVLGNPFPLDISPALL 357
           GLDQKQINNWFINQRKRHWKPSEDMQFVVMDAAHPQYYMD VLGNPFPLDISPALL
Sbjct: 301 GLDQKQINNWFINQRKRHWKPSEDMQFVVMDAAHPQYYMDTVLGNPFPLDISPALL 351

[Close]

BLAST of IVF0005786 vs. ExPASy TrEMBL
Match: A0A5D3CNJ9 (Homeobox protein knotted-1-like LET6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G006200 PE=3 SV=1)

HSP 1 Score: 558.1 bits (1437), Expect = 2.6e-155
Identity = 283/325 (87.08%), Postives = 284/325 (87.38%), Query Frame = 0


Query: 32  MMMMMPLISASQQGGDGSSCTPFLPLPPPNYNNTNNNNNSICNYFMDETNNNNNNNSESS 91
           MMMMMPLISASQQGGDGSSCTPFLPLPPPNYNNTNNNNNSICNYFMDETNNNNNNNSESS
Sbjct: 1   MMMMMPLISASQQGGDGSSCTPFLPLPPPNYNNTNNNNNSICNYFMDETNNNNNNNSESS 60

Query: 92  NGANSCCEVKAKIMAHPHYHRLLTAYVNCRKVGAPPEVVARLEEACASAVTMSSGNNGGG 151
           NGANSCCEVKAKIMAHPHYHRLLTAYVNCRKVGAPPEVVARLEEACASAVTMSSGNNGGG
Sbjct: 61  NGANSCCEVKAKIMAHPHYHRLLTAYVNCRKVGAPPEVVARLEEACASAVTMSSGNNGGG 120

Query: 152 CIGEDPALDQFMEAYCEMLTKYEQELSKPFRDAMLFLQRIDSQFKALSISSSHLPPACGE 211
           CIGEDPALDQFMEAY                                         +CGE
Sbjct: 121 CIGEDPALDQFMEAY-----------------------------------------SCGE 180

Query: 212 AFDRNGSSEEEVDINGHSIDPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEA 271
           AFDRNGSSEEEVDINGHSIDPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEA
Sbjct: 181 AFDRNGSSEEEVDINGHSIDPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEA 240

Query: 272 RQQLLDWWSRHYKWPYPSESQKLALAQSTGLDQKQINNWFINQRKRHWKPSEDMQFVVMD 331
           RQQLLDWWSRHYKWPYPSESQKLALAQSTGLDQKQINNWFINQRKRHWKPSEDMQFVVMD
Sbjct: 241 RQQLLDWWSRHYKWPYPSESQKLALAQSTGLDQKQINNWFINQRKRHWKPSEDMQFVVMD 284

Query: 332 AAHPQYYMDAVLGNPFPLDISPALL 357
           AAHPQYYMDAVLGNPFPLDISPALL
Sbjct: 301 AAHPQYYMDAVLGNPFPLDISPALL 284

[Close]

BLAST of IVF0005786 vs. ExPASy TrEMBL
Match: A0A6J1BTA7 (homeobox protein SBH1 OS=Momordica charantia OX=3673 GN=LOC111005360 PE=3 SV=1)

HSP 1 Score: 550.1 bits (1416), Expect = 7.0e-153
Identity = 298/367 (81.20%), Postives = 316/367 (86.10%), Query Frame = 0


Query: 1   MDGPS--GNCSGGMMNFGDQNNNNNNNNNGLC-SMMMMMPLISASQQGGDGSSCTPFLPL 60
           M+GPS  G  S GMMNFGDQ     NNNNGLC SMMMMMPL+S+   GGDG +C+ FLPL
Sbjct: 1   MEGPSGGGGSSSGMMNFGDQ-----NNNNGLCSSMMMMMPLMSS--HGGDG-ACSSFLPL 60

Query: 61  PPP----NYN-NTNNNNNSICNYFMDETNNNNNNNSESSNGA---NSCCEVKAKIMAHPH 120
           PPP    NY  + NNN  +  +YFM+  N NNN+N+E +N A   +S  +VKAKIMAHPH
Sbjct: 61  PPPPPPHNYEPSPNNNTTNPISYFMENNNTNNNSNNEGANNAASSSSSSQVKAKIMAHPH 120

Query: 121 YHRLLTAYVNCRKVGAPPEVVARLEEACASAVTMSSGNNGGGCIGEDPALDQFMEAYCEM 180
           YHRLL AYVNCRKVGAPPEVVARLE+ACASA T+S  ++   CIGEDPALDQFMEAYCEM
Sbjct: 121 YHRLLAAYVNCRKVGAPPEVVARLEQACASAATISGTSS---CIGEDPALDQFMEAYCEM 180

Query: 181 LTKYEQELSKPFRDAMLFLQRIDSQFKALSISSSHLPPACGEAFDRNGSSEEEVDINGHS 240
           LTKYEQELSKPFRDAMLFLQRID QFKALSISSS    ACGEAFDRNGSSEEEVDINGHS
Sbjct: 181 LTKYEQELSKPFRDAMLFLQRIDCQFKALSISSSS-DAACGEAFDRNGSSEEEVDINGHS 240

Query: 241 IDPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPS 300
           IDPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPS
Sbjct: 241 IDPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPS 300

Query: 301 ESQKLALAQSTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDAAHPQYYMDAVLGNPFPL 357
           ESQKLALAQSTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDAAHPQYYMD VLGNPFPL
Sbjct: 301 ESQKLALAQSTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDAAHPQYYMDTVLGNPFPL 355

[Close]

BLAST of IVF0005786 vs. ExPASy TrEMBL
Match: A0A6J1EG52 (homeobox protein knotted-1-like LET6 OS=Cucurbita moschata OX=3662 GN=LOC111433869 PE=3 SV=1)

HSP 1 Score: 538.1 bits (1385), Expect = 2.8e-149
Identity = 293/370 (79.19%), Postives = 308/370 (83.24%), Query Frame = 0


Query: 1   MDGPSGNCSGGMMNFGDQNNNNNNNNNGLC-SMMMMMPLISA--SQQGGDGSSCTPFLPL 60
           MDGP G+ S GMMNFGDQ    NN+NNGLC SMMMMMPL+S+        G +C PF PL
Sbjct: 1   MDGPGGS-SSGMMNFGDQ----NNSNNGLCSSMMMMMPLMSSHHHHHHHQGDACNPFPPL 60

Query: 61  PPPNY--NNTNNNN-----NSICNYFMDE----TNNNNNNNSESSNGANSCCEVKAKIMA 120
           P PNY  NN NN N     N IC YFMDE    T  NNNN++   N  +S CE+KAKIM 
Sbjct: 61  PSPNYTTNNINNTNTSSSSNPIC-YFMDEHTTTTTTNNNNDNGCCNANSSSCELKAKIMG 120

Query: 121 HPHYHRLLTAYVNCRKVGAPPEVVARLEEACASAVTMSSGNNGGGCIGEDPALDQFMEAY 180
           HPHYHRLL AYVNCRKVGAPP+VVARLE ACASA+T+ SG +  GCIGEDPALDQFMEAY
Sbjct: 121 HPHYHRLLAAYVNCRKVGAPPDVVARLEGACASALTI-SGTSCTGCIGEDPALDQFMEAY 180

Query: 181 CEMLTKYEQELSKPFRDAMLFLQRIDSQFKALSISSSHLPPACGEAFDRNGSSEEEVDIN 240
           CEMLTKYEQELSKPFRDAMLFL RI+ QFKALSISSS     CGEAF+RNGSSEEEVDIN
Sbjct: 181 CEMLTKYEQELSKPFRDAMLFLHRIECQFKALSISSS--DAVCGEAFERNGSSEEEVDIN 240

Query: 241 GHSIDPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWP 300
           GHSIDPQAEDRELKGQLLRKYSG LGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWP
Sbjct: 241 GHSIDPQAEDRELKGQLLRKYSGCLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWP 300

Query: 301 YPSESQKLALAQSTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDAAHPQYYMDAVLGNP 357
           YPSESQKLALAQSTGLDQKQINNWFINQRKRHWKPSEDMQFVVMD  HPQYYMD VLGNP
Sbjct: 301 YPSESQKLALAQSTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDGGHPQYYMDTVLGNP 360

[Close]

BLAST of IVF0005786 vs. NCBI nr
Match: XP_008440041.1 (PREDICTED: homeobox protein knotted-1-like LET6 [Cucumis melo])

HSP 1 Score: 719 bits (1857), Expect = 9.39e-262
Identity = 356/356 (100.00%), Postives = 356/356 (100.00%), Query Frame = 0


Query: 1   MDGPSGNCSGGMMNFGDQNNNNNNNNNGLCSMMMMMPLISASQQGGDGSSCTPFLPLPPP 60
           MDGPSGNCSGGMMNFGDQNNNNNNNNNGLCSMMMMMPLISASQQGGDGSSCTPFLPLPPP
Sbjct: 1   MDGPSGNCSGGMMNFGDQNNNNNNNNNGLCSMMMMMPLISASQQGGDGSSCTPFLPLPPP 60

Query: 61  NYNNTNNNNNSICNYFMDETNNNNNNNSESSNGANSCCEVKAKIMAHPHYHRLLTAYVNC 120
           NYNNTNNNNNSICNYFMDETNNNNNNNSESSNGANSCCEVKAKIMAHPHYHRLLTAYVNC
Sbjct: 61  NYNNTNNNNNSICNYFMDETNNNNNNNSESSNGANSCCEVKAKIMAHPHYHRLLTAYVNC 120

Query: 121 RKVGAPPEVVARLEEACASAVTMSSGNNGGGCIGEDPALDQFMEAYCEMLTKYEQELSKP 180
           RKVGAPPEVVARLEEACASAVTMSSGNNGGGCIGEDPALDQFMEAYCEMLTKYEQELSKP
Sbjct: 121 RKVGAPPEVVARLEEACASAVTMSSGNNGGGCIGEDPALDQFMEAYCEMLTKYEQELSKP 180

Query: 181 FRDAMLFLQRIDSQFKALSISSSHLPPACGEAFDRNGSSEEEVDINGHSIDPQAEDRELK 240
           FRDAMLFLQRIDSQFKALSISSSHLPPACGEAFDRNGSSEEEVDINGHSIDPQAEDRELK
Sbjct: 181 FRDAMLFLQRIDSQFKALSISSSHLPPACGEAFDRNGSSEEEVDINGHSIDPQAEDRELK 240

Query: 241 GQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQKLALAQST 300
           GQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQKLALAQST
Sbjct: 241 GQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQKLALAQST 300

Query: 301 GLDQKQINNWFINQRKRHWKPSEDMQFVVMDAAHPQYYMDAVLGNPFPLDISPALL 356
           GLDQKQINNWFINQRKRHWKPSEDMQFVVMDAAHPQYYMDAVLGNPFPLDISPALL
Sbjct: 301 GLDQKQINNWFINQRKRHWKPSEDMQFVVMDAAHPQYYMDAVLGNPFPLDISPALL 356

[Close]

BLAST of IVF0005786 vs. NCBI nr
Match: XP_004134981.2 (homeobox protein knotted-1-like LET6 [Cucumis sativus] >KGN49079.1 hypothetical protein Csa_003195 [Cucumis sativus])

HSP 1 Score: 687 bits (1772), Expect = 7.05e-249
Identity = 346/356 (97.19%), Postives = 346/356 (97.19%), Query Frame = 0


Query: 1   MDGPSGNCSGGMMNFGDQNNNNNNNNNGLCSMMMMMPLISASQQGGDGSSCTPFLPLPPP 60
           MD PSGNCSGGMMNFGDQNNNNNNNN GLCSMMMMMPLISASQQGGDGSSCTPFLPLPPP
Sbjct: 1   MDVPSGNCSGGMMNFGDQNNNNNNNN-GLCSMMMMMPLISASQQGGDGSSCTPFLPLPPP 60

Query: 61  NYNNTNNNNNSICNYFMDETNNNNNNNSESSNGANSCCEVKAKIMAHPHYHRLLTAYVNC 120
           NYNN  NNN SICNYFMDETN  NNNN ESSNGANSCCEVKAKIMAHPHYHRLL AYVNC
Sbjct: 61  NYNN--NNNTSICNYFMDETN--NNNNDESSNGANSCCEVKAKIMAHPHYHRLLAAYVNC 120

Query: 121 RKVGAPPEVVARLEEACASAVTMSSGNNGGGCIGEDPALDQFMEAYCEMLTKYEQELSKP 180
           RKVGAPPEVVARLEEACASAVTMSSGNNGGGCIGEDPALDQFMEAYCEMLTKYEQELSKP
Sbjct: 121 RKVGAPPEVVARLEEACASAVTMSSGNNGGGCIGEDPALDQFMEAYCEMLTKYEQELSKP 180

Query: 181 FRDAMLFLQRIDSQFKALSISSSHLPPACGEAFDRNGSSEEEVDINGHSIDPQAEDRELK 240
           FRDAMLFLQRIDSQFKALSISSSHLPPACGEAFDRNGSSEEEVDINGHSIDPQAEDRELK
Sbjct: 181 FRDAMLFLQRIDSQFKALSISSSHLPPACGEAFDRNGSSEEEVDINGHSIDPQAEDRELK 240

Query: 241 GQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQKLALAQST 300
           GQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQKLALAQST
Sbjct: 241 GQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQKLALAQST 300

Query: 301 GLDQKQINNWFINQRKRHWKPSEDMQFVVMDAAHPQYYMDAVLGNPFPLDISPALL 356
           GLDQKQINNWFINQRKRHWKPSEDMQFVVMDAAHPQYYMD VLGNPFPLDISPALL
Sbjct: 301 GLDQKQINNWFINQRKRHWKPSEDMQFVVMDAAHPQYYMDTVLGNPFPLDISPALL 351

[Close]

BLAST of IVF0005786 vs. NCBI nr
Match: XP_038883370.1 (homeobox protein knotted-1-like LET6 [Benincasa hispida])

HSP 1 Score: 626 bits (1614), Expect = 8.14e-225
Identity = 326/358 (91.06%), Postives = 333/358 (93.02%), Query Frame = 0


Query: 1   MDGPSGNCSGGMMNFGDQNNNNNNNNNGLCS-MMMMMPLISASQQGGDGSSCTPFLPLPP 60
           MDGPSG+ SGGMMNFGDQNNNNNNNNNGLCS MMMMMPLIS+SQQGG+GS CTPFL LPP
Sbjct: 1   MDGPSGSSSGGMMNFGDQNNNNNNNNNGLCSTMMMMMPLISSSQQGGNGS-CTPFLSLPP 60

Query: 61  PNYNNTNN-NNNSICNYFMDETNNNNNNNSESSNGANSCCEVKAKIMAHPHYHRLLTAYV 120
            NYNN NN +NNSICNYFMD    NNNNN+ESSNG NSCCEVKAKIMAHPHYHRLL AYV
Sbjct: 61  -NYNNNNNTSNNSICNYFMDS---NNNNNNESSNGGNSCCEVKAKIMAHPHYHRLLAAYV 120

Query: 121 NCRKVGAPPEVVARLEEACASAVTMSSGNNGGGCIGEDPALDQFMEAYCEMLTKYEQELS 180
           NCRKVGAPPEVVA LEEACASA  MS   N  GCIGEDPALDQFMEAYCEML KYEQELS
Sbjct: 121 NCRKVGAPPEVVAGLEEACASAARMSG--NSSGCIGEDPALDQFMEAYCEMLIKYEQELS 180

Query: 181 KPFRDAMLFLQRIDSQFKALSISSSHLPPACGEAFDRNGSSEEEVDINGHSIDPQAEDRE 240
           KPFRDAMLFLQRIDSQFKALSISSS+ PPACGEAFDRNGSSEEEVDING+SIDPQAEDRE
Sbjct: 181 KPFRDAMLFLQRIDSQFKALSISSSY-PPACGEAFDRNGSSEEEVDINGNSIDPQAEDRE 240

Query: 241 LKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQKLALAQ 300
           LKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQKLALAQ
Sbjct: 241 LKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQKLALAQ 300

Query: 301 STGLDQKQINNWFINQRKRHWKPSEDMQFVVMDAAHPQYYMDAVLGNPFPLDISPALL 356
           STGLDQKQINNWFINQRKRHWKPSEDMQFVVMDAAHPQYYMD VLGNPFPLDISP LL
Sbjct: 301 STGLDQKQINNWFINQRKRHWKPSEDMQFVVMDAAHPQYYMDTVLGNPFPLDISPTLL 350

[Close]

BLAST of IVF0005786 vs. NCBI nr
Match: TYK13020.1 (homeobox protein knotted-1-like LET6 [Cucumis melo var. makuwa])

HSP 1 Score: 559 bits (1441), Expect = 1.60e-199
Identity = 283/325 (87.08%), Postives = 284/325 (87.38%), Query Frame = 0


Query: 32  MMMMMPLISASQQGGDGSSCTPFLPLPPPNYNNTNNNNNSICNYFMDETNNNNNNNSESS 91
           MMMMMPLISASQQGGDGSSCTPFLPLPPPNYNNTNNNNNSICNYFMDETNNNNNNNSESS
Sbjct: 1   MMMMMPLISASQQGGDGSSCTPFLPLPPPNYNNTNNNNNSICNYFMDETNNNNNNNSESS 60

Query: 92  NGANSCCEVKAKIMAHPHYHRLLTAYVNCRKVGAPPEVVARLEEACASAVTMSSGNNGGG 151
           NGANSCCEVKAKIMAHPHYHRLLTAYVNCRKVGAPPEVVARLEEACASAVTMSSGNNGGG
Sbjct: 61  NGANSCCEVKAKIMAHPHYHRLLTAYVNCRKVGAPPEVVARLEEACASAVTMSSGNNGGG 120

Query: 152 CIGEDPALDQFMEAYCEMLTKYEQELSKPFRDAMLFLQRIDSQFKALSISSSHLPPACGE 211
           CIGEDPALDQFMEAY                                         +CGE
Sbjct: 121 CIGEDPALDQFMEAY-----------------------------------------SCGE 180

Query: 212 AFDRNGSSEEEVDINGHSIDPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEA 271
           AFDRNGSSEEEVDINGHSIDPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEA
Sbjct: 181 AFDRNGSSEEEVDINGHSIDPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEA 240

Query: 272 RQQLLDWWSRHYKWPYPSESQKLALAQSTGLDQKQINNWFINQRKRHWKPSEDMQFVVMD 331
           RQQLLDWWSRHYKWPYPSESQKLALAQSTGLDQKQINNWFINQRKRHWKPSEDMQFVVMD
Sbjct: 241 RQQLLDWWSRHYKWPYPSESQKLALAQSTGLDQKQINNWFINQRKRHWKPSEDMQFVVMD 284

Query: 332 AAHPQYYMDAVLGNPFPLDISPALL 356
           AAHPQYYMDAVLGNPFPLDISPALL
Sbjct: 301 AAHPQYYMDAVLGNPFPLDISPALL 284

[Close]

BLAST of IVF0005786 vs. NCBI nr
Match: XP_022132524.1 (homeobox protein SBH1 [Momordica charantia])

HSP 1 Score: 550 bits (1418), Expect = 6.94e-195
Identity = 298/367 (81.20%), Postives = 316/367 (86.10%), Query Frame = 0


Query: 1   MDGPSGN--CSGGMMNFGDQNNNNNNNNNGLCS-MMMMMPLISASQQGGDGSSCTPFLPL 60
           M+GPSG    S GMMNFGDQNNNN     GLCS MMMMMPL+S+   GGDG+ C+ FLPL
Sbjct: 1   MEGPSGGGGSSSGMMNFGDQNNNN-----GLCSSMMMMMPLMSS--HGGDGA-CSSFLPL 60

Query: 61  PPP----NYN-NTNNNNNSICNYFMDETNNNNNNNSESSNGA---NSCCEVKAKIMAHPH 120
           PPP    NY  + NNN  +  +YFM+  N NNN+N+E +N A   +S  +VKAKIMAHPH
Sbjct: 61  PPPPPPHNYEPSPNNNTTNPISYFMENNNTNNNSNNEGANNAASSSSSSQVKAKIMAHPH 120

Query: 121 YHRLLTAYVNCRKVGAPPEVVARLEEACASAVTMSSGNNGGGCIGEDPALDQFMEAYCEM 180
           YHRLL AYVNCRKVGAPPEVVARLE+ACASA T+S  ++   CIGEDPALDQFMEAYCEM
Sbjct: 121 YHRLLAAYVNCRKVGAPPEVVARLEQACASAATISGTSS---CIGEDPALDQFMEAYCEM 180

Query: 181 LTKYEQELSKPFRDAMLFLQRIDSQFKALSISSSHLPPACGEAFDRNGSSEEEVDINGHS 240
           LTKYEQELSKPFRDAMLFLQRID QFKALSISSS    ACGEAFDRNGSSEEEVDINGHS
Sbjct: 181 LTKYEQELSKPFRDAMLFLQRIDCQFKALSISSSS-DAACGEAFDRNGSSEEEVDINGHS 240

Query: 241 IDPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPS 300
           IDPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPS
Sbjct: 241 IDPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPS 300

Query: 301 ESQKLALAQSTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDAAHPQYYMDAVLGNPFPL 356
           ESQKLALAQSTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDAAHPQYYMD VLGNPFPL
Sbjct: 301 ESQKLALAQSTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDAAHPQYYMDTVLGNPFPL 355

[Close]

BLAST of IVF0005786 vs. TAIR 10
Match: AT1G62360.1 (KNOX/ELK homeobox transcription factor )

HSP 1 Score: 410.2 bits (1053), Expect = 1.7e-114
Identity = 242/388 (62.37%), Postives = 276/388 (71.13%), Query Frame = 0


Query: 1   MDGPSGNCSGGMMNFGDQNNNNNNNNNGLCSMMMMMPLISAS-----------QQGGDG- 60
           M+  S + S  M   GD      N++  +C MMMMMP I  S           QQ  DG 
Sbjct: 1   MESGSNSTSCPMAFAGD------NSDGPMCPMMMMMPPIMTSHQHHGHDHQHQQQEHDGY 60

Query: 61  -------SSCTPFLP--LPPPNYNN--TNNNNNSIC--NYFMDETNNNN--NNNSESSNG 120
                   S + FL    PP    N   ++++ S C   Y + E ++N          + 
Sbjct: 61  AYQSHHQQSSSLFLQSLAPPQGTKNKVASSSSPSSCAPAYSLMEIHHNEIVAGGINPCSS 120

Query: 121 ANSCCEVKAKIMAHPHYHRLLTAYVNCRKVGAPPEVVARLEEACASAVTMSSGNNGGGCI 180
           ++S   VKAKIMAHPHYHRLL AYVNC+KVGAPPEVVARLEEAC+SA   ++     GC+
Sbjct: 121 SSSSASVKAKIMAHPHYHRLLAAYVNCQKVGAPPEVVARLEEACSSAAAAAASMGPTGCL 180

Query: 181 GEDPALDQFMEAYCEMLTKYEQELSKPFRDAMLFLQRIDSQFKALSISSSHLPPACGE-A 240
           GEDP LDQFMEAYCEML KYEQELSKPF++AM+FLQR++ QFK+LS+SS       GE A
Sbjct: 181 GEDPGLDQFMEAYCEMLVKYEQELSKPFKEAMVFLQRVECQFKSLSLSSPSSFSGYGETA 240

Query: 241 FDR--NGSSEEEVDINGHSIDPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKE 300
            DR  NGSSEEEVD+N   +DPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKE
Sbjct: 241 IDRNNNGSSEEEVDMNNEFVDPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKE 300

Query: 301 ARQQLLDWWSRHYKWPYPSESQKLALAQSTGLDQKQINNWFINQRKRHWKPSEDMQFVVM 357
           ARQQLLDWWSRHYKWPYPSE QKLALA+STGLDQKQINNWFINQRKRHWKPSEDMQFVVM
Sbjct: 301 ARQQLLDWWSRHYKWPYPSEQQKLALAESTGLDQKQINNWFINQRKRHWKPSEDMQFVVM 360

[Close]

BLAST of IVF0005786 vs. TAIR 10
Match: AT4G08150.1 (KNOTTED-like from Arabidopsis thaliana )

HSP 1 Score: 281.6 bits (719), Expect = 9.0e-76
Identity = 182/386 (47.15%), Postives = 223/386 (57.77%), Query Frame = 0


Query: 2   DGPSGNCSGGMMNFGDQNNNNNNNNNGLCSMMMMMPLISASQQGGDGSSCTPFLPLPPPN 61
           D  + N +    N+G   NN NNNN+      M+ P +S+             LP    N
Sbjct: 33  DTNNNNNNNNSSNYGPGYNNTNNNNHH--HQHMLFPHMSS------------LLPQTTEN 92

Query: 62  -----YNNTNNNNN----------SICNYFM--------DETNNNNNNNSESSNGANSCC 121
                ++  NNNNN           I +Y M         E NNNNN+N           
Sbjct: 93  CFRSDHDQPNNNNNPSVKSEASSSRINHYSMLMRAIHNTQEANNNNNDNVSDVEA----- 152

Query: 122 EVKAKIMAHPHYHRLLTAYVNCRKVGAPPEVVARLEEACAS-AVTMSSGNNGGGCIGEDP 181
            +KAKI+AHPHY  LL AY++C+K+GAPP+VV R+  A                    DP
Sbjct: 153 -MKAKIIAHPHYSTLLQAYLDCQKIGAPPDVVDRITAARQDFEARQQRSTPSVSASSRDP 212

Query: 182 ALDQFMEAYCEMLTKYEQELSKPFRDAMLFLQRIDSQFKALSISSSHLPPACGEAFDRNG 241
            LDQFMEAYC+ML KY +EL++P ++AM F++RI+SQ   L  S  H+        D  G
Sbjct: 213 ELDQFMEAYCDMLVKYREELTRPIQEAMEFIRRIESQLSMLCQSPIHILNNPDGKSDNMG 272

Query: 242 SSEEEVDING------HSIDPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEA 301
           SS+EE + N         IDP+AEDRELK  LL+KYSGYL SLKQE  KK+KKGKLPKEA
Sbjct: 273 SSDEEQENNSGGETELPEIDPRAEDRELKNHLLKKYSGYLSSLKQELSKKKKKGKLPKEA 332

Query: 302 RQQLLDWWSRHYKWPYPSESQKLALAQSTGLDQKQINNWFINQRKRHWKPSEDMQFVVMD 354
           RQ+LL WW  HYKWPYPSES+K+ALA+STGLDQKQINNWFINQRKRHWKPSEDMQF+VMD
Sbjct: 333 RQKLLTWWELHYKWPYPSESEKVALAESTGLDQKQINNWFINQRKRHWKPSEDMQFMVMD 392

[Close]

BLAST of IVF0005786 vs. TAIR 10
Match: AT1G23380.1 (KNOTTED1-like homeobox gene 6 )

HSP 1 Score: 250.0 bits (637), Expect = 2.9e-66
Identity = 124/245 (50.61%), Postives = 165/245 (67.35%), Query Frame = 0


Query: 100 VKAKIMAHPHYHRLLTAYVNCRKVGAPPEVVARLEEACASAVTMSSGNNGGGCIGEDPAL 159
           +KAKI  HP Y RLL AY++C+KVGAPPE+   LEE    +           C G DP L
Sbjct: 85  IKAKIACHPSYPRLLQAYIDCQKVGAPPEIACLLEEIQRESDVYKQEVVPSSCFGADPEL 144

Query: 160 DQFMEAYCEMLTKYEQELSKPFRDAMLFLQRIDSQFKALSISSSHLPPACGEAFDRNGSS 219
           D+FME YC++L KY+ +L++PF +A  FL +I+ Q + L    + +  A G + D   SS
Sbjct: 145 DEFMETYCDILVKYKSDLARPFDEATCFLNKIEMQLRNL---CTGVESARGVSEDGVISS 204

Query: 220 EEEVDINGHSI----DPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQL 279
           +EE+    H +      + EDR+LK +LLRK+   + +LK EF KK+KKGKLP+EARQ L
Sbjct: 205 DEELSGGDHEVAEDGRQRCEDRDLKDRLLRKFGSRISTLKLEFSKKKKKGKLPREARQAL 264

Query: 280 LDWWSRHYKWPYPSESQKLALAQSTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDAAHP 339
           LDWW+ HYKWPYP+E  K+ALA +TGLDQKQINNWFINQRKRHWKPSE+M F +MD +  
Sbjct: 265 LDWWNLHYKWPYPTEGDKIALADATGLDQKQINNWFINQRKRHWKPSENMPFAMMDDSSG 324

Query: 340 QYYMD 341
            ++ +
Sbjct: 325 SFFTE 326

[Close]

BLAST of IVF0005786 vs. TAIR 10
Match: AT1G23380.2 (KNOTTED1-like homeobox gene 6 )

HSP 1 Score: 245.0 bits (624), Expect = 9.3e-65
Identity = 124/247 (50.20%), Postives = 165/247 (66.80%), Query Frame = 0


Query: 100 VKAKIMAHPHYHRLLTAYVNCRK--VGAPPEVVARLEEACASAVTMSSGNNGGGCIGEDP 159
           +KAKI  HP Y RLL AY++C+K  VGAPPE+   LEE    +           C G DP
Sbjct: 85  IKAKIACHPSYPRLLQAYIDCQKKQVGAPPEIACLLEEIQRESDVYKQEVVPSSCFGADP 144

Query: 160 ALDQFMEAYCEMLTKYEQELSKPFRDAMLFLQRIDSQFKALSISSSHLPPACGEAFDRNG 219
            LD+FME YC++L KY+ +L++PF +A  FL +I+ Q + L    + +  A G + D   
Sbjct: 145 ELDEFMETYCDILVKYKSDLARPFDEATCFLNKIEMQLRNL---CTGVESARGVSEDGVI 204

Query: 220 SSEEEVDINGHSI----DPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQ 279
           SS+EE+    H +      + EDR+LK +LLRK+   + +LK EF KK+KKGKLP+EARQ
Sbjct: 205 SSDEELSGGDHEVAEDGRQRCEDRDLKDRLLRKFGSRISTLKLEFSKKKKKGKLPREARQ 264

Query: 280 QLLDWWSRHYKWPYPSESQKLALAQSTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDAA 339
            LLDWW+ HYKWPYP+E  K+ALA +TGLDQKQINNWFINQRKRHWKPSE+M F +MD +
Sbjct: 265 ALLDWWNLHYKWPYPTEGDKIALADATGLDQKQINNWFINQRKRHWKPSENMPFAMMDDS 324

Query: 340 HPQYYMD 341
              ++ +
Sbjct: 325 SGSFFTE 328

[Close]

BLAST of IVF0005786 vs. TAIR 10
Match: AT1G70510.1 (KNOTTED-like from Arabidopsis thaliana 2 )

HSP 1 Score: 238.8 bits (608), Expect = 6.7e-63
Identity = 121/247 (48.99%), Postives = 163/247 (65.99%), Query Frame = 0


Query: 100 VKAKIMAHPHYHRLLTAYVNCRKVGAPPEVVARLEEACASAVTMSSGNNGGGCIGEDPAL 159
           +K+KI +HP Y RLL  Y++C+KVGAP E+   LEE                C G DP L
Sbjct: 69  IKSKIASHPLYPRLLQTYIDCQKVGAPMEIACILEEIQRENHVYKRDVAPLSCFGADPEL 128

Query: 160 DQFMEAYCEMLTKYEQELSKPFRDAMLFLQRIDSQFKALSISSSHLPPACGEAFDRNG-- 219
           D+FME YC++L KY+ +L++PF +A  F+ +I+ Q + L        PA   A   +G  
Sbjct: 129 DEFMETYCDILVKYKTDLARPFDEATTFINKIEMQLQNLCTG-----PASATALSDDGAV 188

Query: 220 SSEEEV----DINGHSIDPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQ 279
           SS+EE+    DI       ++ DR+LK QLLRK+  ++ SLK EF KK+KKGKLP+EARQ
Sbjct: 189 SSDEELREDDDIAADDSQQRSNDRDLKDQLLRKFGSHISSLKLEFSKKKKKGKLPREARQ 248

Query: 280 QLLDWWSRHYKWPYPSESQKLALAQSTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDAA 339
            LLDWW+ H KWPYP+E  K++LA+ TGLDQKQINNWFINQRKRHWKPSE+M F +MD +
Sbjct: 249 ALLDWWNVHNKWPYPTEGDKISLAEETGLDQKQINNWFINQRKRHWKPSENMPFDMMDDS 308

Query: 340 HPQYYMD 341
           +  ++ +
Sbjct: 309 NETFFTE 310

The following BLAST results are available for this feature:

BLAST of IVF0005786 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O22299	1.4e-129	69.11	Homeobox protein knotted-1-like LET6 OS=Solanum lycopersicum OX=4081 GN=LET6 PE=...	[more]
P46608	3.3e-123	64.45	Homeobox protein SBH1 OS=Glycine max OX=3847 GN=H1 PE=2 SV=1	[more]
Q38874	2.4e-113	62.37	Homeobox protein SHOOT MERISTEMLESS OS=Arabidopsis thaliana OX=3702 GN=STM PE=1 ...	[more]
Q9M6D9	7.3e-107	59.95	Homeobox protein SHOOT MERISTEMLESS OS=Brassica oleracea OX=3712 GN=STM PE=2 SV=...	[more]
Q41853	1.2e-77	57.69	Homeobox protein rough sheath 1 OS=Zea mays OX=4577 GN=RS1 PE=2 SV=1	[more]

BLAST of IVF0005786 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B0X4	6.7e-204	100.00	homeobox protein knotted-1-like LET6 OS=Cucumis melo OX=3656 GN=LOC103484637 PE=...	[more]
A0A0A0KJU4	1.1e-193	97.19	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G513430 PE=3 SV=1	[more]
A0A5D3CNJ9	2.6e-155	87.08	Homeobox protein knotted-1-like LET6 OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A6J1BTA7	7.0e-153	81.20	homeobox protein SBH1 OS=Momordica charantia OX=3673 GN=LOC111005360 PE=3 SV=1	[more]
A0A6J1EG52	2.8e-149	79.19	homeobox protein knotted-1-like LET6 OS=Cucurbita moschata OX=3662 GN=LOC1114338...	[more]

BLAST of IVF0005786 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008440041.1	9.39e-262	100.00	PREDICTED: homeobox protein knotted-1-like LET6 [Cucumis melo]	[more]
XP_004134981.2	7.05e-249	97.19	homeobox protein knotted-1-like LET6 [Cucumis sativus] >KGN49079.1 hypothetical ...	[more]
XP_038883370.1	8.14e-225	91.06	homeobox protein knotted-1-like LET6 [Benincasa hispida]	[more]
TYK13020.1	1.60e-199	87.08	homeobox protein knotted-1-like LET6 [Cucumis melo var. makuwa]	[more]
XP_022132524.1	6.94e-195	81.20	homeobox protein SBH1 [Momordica charantia]	[more]

BLAST of IVF0005786 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G62360.1	1.7e-114	62.37	KNOX/ELK homeobox transcription factor	[more]
AT4G08150.1	9.0e-76	47.15	KNOTTED-like from Arabidopsis thaliana	[more]
AT1G23380.1	2.9e-66	50.61	KNOTTED1-like homeobox gene 6	[more]
AT1G23380.2	9.3e-65	50.20	KNOTTED1-like homeobox gene 6	[more]
AT1G70510.1	6.7e-63	48.99	KNOTTED-like from Arabidopsis thaliana 2	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005541	KNOX2	SMART	SM01256	KNOX2_2	coord: 149..200 e-value: 5.7E-24 score: 95.6
IPR005541	KNOX2	PFAM	PF03791	KNOX2	coord: 152..198 e-value: 5.5E-20 score: 70.6
IPR001356	Homeobox domain	SMART	SM00389	HOX_1	coord: 260..325 e-value: 7.7E-13 score: 58.7
IPR001356	Homeobox domain	PROSITE	PS50071	HOMEOBOX_2	coord: 258..321 score: 13.005249
IPR001356	Homeobox domain	CDD	cd00086	homeodomain	coord: 270..322 e-value: 5.58404E-13 score: 61.1052
IPR005540	KNOX1	SMART	SM01255	KNOX1_2	coord: 98..142 e-value: 1.2E-18 score: 78.0
IPR005540	KNOX1	PFAM	PF03790	KNOX1	coord: 100..138 e-value: 2.0E-21 score: 75.5
IPR005539	ELK domain	SMART	SM01188	ELK_2	coord: 238..259 e-value: 2.8E-8 score: 43.5
IPR005539	ELK domain	PFAM	PF03789	ELK	coord: 238..259 e-value: 3.7E-11 score: 42.8
IPR005539	ELK domain	PROSITE	PS51213	ELK	coord: 238..258 score: 11.173647
IPR008422	Homeobox KN domain	PFAM	PF05920	Homeobox_KN	coord: 278..317 e-value: 6.3E-17 score: 61.2
None	No IPR available	GENE3D	1.10.10.60		coord: 263..325 e-value: 8.2E-27 score: 94.7
None	No IPR available	PANTHER	PTHR11850:SF297	SUBFAMILY NOT NAMED	coord: 6..345
None	No IPR available	PANTHER	PTHR11850	HOMEOBOX PROTEIN TRANSCRIPTION FACTORS	coord: 6..345
IPR017970	Homeobox, conserved site	PROSITE	PS00027	HOMEOBOX_1	coord: 296..319
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 260..334

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0005786.2	IVF0005786.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0048440	carpel development
biological_process	GO:0010582	floral meristem determinacy
biological_process	GO:0009934	regulation of meristem structural organization
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005768	endosome
cellular_component	GO:0015630	microtubule cytoskeleton
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0009506	plasmodesma
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0042803	protein homodimerization activity
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding
molecular_function	GO:0003677	DNA binding