IVF0007508 (gene) Melon (IVF77) v1

Overview
NameIVF0007508
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionCyclin
Locationchr05: 23602001 .. 23603295 (+)
RNA-Seq ExpressionIVF0007508
SyntenyIVF0007508
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGGGAAATGGCAAATAATAGTATGGATTTTCAAGTAGAAACAGATTCACTTCTTGGACTGAGTGAATCTGGGAAACTTATTTCGAGTTCTCCACAAGTTTTGTCAATTCTTTCCTCTGTTTTCGAGAGGTCGATTCAGAAGAATGAAAAGCTATTGAAAAGACTCAAAAAGAAAGACAACGTTACAATTTTCCACAGTTCCCGAGCTCCTACCATGGGCATTGGACAATATATCGATCGCATCTTGAAGTACACATGTTGTGGAACTGCTTGCTTAATTGTTGCCTACATATACATTGAAAGGTATCTTCAAAAAATGGATGTTTACCTTACTTCTCTGAATGTCCACCGCCTTCTGATCACCAGCATCATGGTTGCAGCAAAGTTTACCGATGCCGGGTAAGTTCTACCGTTGCTTAGTTAGCTTGGCTAGGTTGTAACTCAGTTGAGATGAAGAGATTTTGAGCTTGGTTAATATTATGCAGTTATAGTTTCTTTATAGTTCACATCACACTCACTTTACTTCAGTTGGCTTCCCCTTCATTCGTTGAACTGAGATCATAGGAGGAGGAATCCTTAAGTTCAAGTTTGGTTCATTTTTCAAACTTGTCCGCAATCATTTCAAGGTTTATGATTATTTATTTTATTACCAAGCCTTTACTGTCACAAAAATGTTAAAATTTATTGATGAAAATATTTATTGTACTCGCATTCGATCCCTATAGACGCTCACATCACATGCATAAATTATCCTTCTACTAAAGTTCAATGATGCTAAGGACTTAATTATAGTCAAGGTATGAAAGATTAAAATGAAAATTTTAGATGATTTTTATACAAAATGTAAGAGTGATTCAAACACTGCTTAGAAAGATATCAATAGCTAGTGAGTTGTTTGCTCGATGCTGCCACACCGATGATATTGTGCCATCTCATCTGTCATATTCTGATATCTCTGAAAACTTCCTTCTAATTTCTTGGATGTTATAACAATACTTTTTATGTATACAATTACACAACTTGATGTATTATGATTCTATGCAGGTGCTATAACAATACTTTTTATGCCAAGTAGGAGGAGTGAGTACAAAAGAAATGAACAGCTTGGAGATAGAATTTCTGTTCAATTTGGACTTCAGACTTCATGTCACCGCTGACGTTTTCAGTACTCATTGTTTGCAGCTTCAAAAGGAAGTTCTTGGGGGAGAGAATCAAGTCGAACGTCGACCCGGTAACAAAGCTCGAACTAAATGTTTGCCTCAAATTACAGGGTATACTTGCAGTGCCATTTAA

mRNA sequence

ATGAGGGAAATGGCAAATAATAGTATGGATTTTCAAGTAGAAACAGATTCACTTCTTGGACTGAGTGAATCTGGGAAACTTATTTCGAGTTCTCCACAAGTTTTGTCAATTCTTTCCTCTGTTTTCGAGAGGTCGATTCAGAAGAATGAAAAGCTATTGAAAAGACTCAAAAAGAAAGACAACGTTACAATTTTCCACAGTTCCCGAGCTCCTACCATGGGCATTGGACAATATATCGATCGCATCTTGAAGTACACATGTTGTGGAACTGCTTGCTTAATTGTTGCCTACATATACATTGAAAGGTATCTTCAAAAAATGGATGTTTACCTTACTTCTCTGAATGTCCACCGCCTTCTGATCACCAGCATCATGGTTGCAGCAAAGTTTACCGATGCCGGTACAAAAGAAATGAACAGCTTGGAGATAGAATTTCTGTTCAATTTGGACTTCAGACTTCATGTCACCGCTGACGTTTTCAGTACTCATTGTTTGCAGCTTCAAAAGGAAGTTCTTGGGGGAGAGAATCAAGTCGAACGTCGACCCGGTAACAAAGCTCGAACTAAATGTTTGCCTCAAATTACAGGGTATACTTGCAGTGCCATTTAA

Coding sequence (CDS)

ATGAGGGAAATGGCAAATAATAGTATGGATTTTCAAGTAGAAACAGATTCACTTCTTGGACTGAGTGAATCTGGGAAACTTATTTCGAGTTCTCCACAAGTTTTGTCAATTCTTTCCTCTGTTTTCGAGAGGTCGATTCAGAAGAATGAAAAGCTATTGAAAAGACTCAAAAAGAAAGACAACGTTACAATTTTCCACAGTTCCCGAGCTCCTACCATGGGCATTGGACAATATATCGATCGCATCTTGAAGTACACATGTTGTGGAACTGCTTGCTTAATTGTTGCCTACATATACATTGAAAGGTATCTTCAAAAAATGGATGTTTACCTTACTTCTCTGAATGTCCACCGCCTTCTGATCACCAGCATCATGGTTGCAGCAAAGTTTACCGATGCCGGTACAAAAGAAATGAACAGCTTGGAGATAGAATTTCTGTTCAATTTGGACTTCAGACTTCATGTCACCGCTGACGTTTTCAGTACTCATTGTTTGCAGCTTCAAAAGGAAGTTCTTGGGGGAGAGAATCAAGTCGAACGTCGACCCGGTAACAAAGCTCGAACTAAATGTTTGCCTCAAATTACAGGGTATACTTGCAGTGCCATTTAA

Protein sequence

MREMANNSMDFQVETDSLLGLSESGKLISSSPQVLSILSSVFERSIQKNEKLLKRLKKKDNVTIFHSSRAPTMGIGQYIDRILKYTCCGTACLIVAYIYIERYLQKMDVYLTSLNVHRLLITSIMVAAKFTDAGTKEMNSLEIEFLFNLDFRLHVTADVFSTHCLQLQKEVLGGENQVERRPGNKARTKCLPQITGYTCSAI
Homology
[Close]
BLAST of IVF0007508 vs. ExPASy Swiss-Prot
Match: Q75HV0 (Cyclin-P3-1 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCP3-1 PE=3 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 5.9e-37
Identity = 84/168 (50.00%), Postives = 113/168 (67.26%), Query Frame = 0 

Query: 19  LGLSESGKLISSSPQVLSILSSVFERSIQKNEKLLKRLKKKDNVTIFHSSRAPTMGIGQY 78
           L +S+S K  +  P+VL +L++  +RS+QKNE LL   K KD+ TIFH  RAP + I  Y
Sbjct: 23  LTVSQSKKNNTEYPKVLLLLAAYLDRSVQKNEDLLDSNKIKDSSTIFHGHRAPDLSIKLY 82

Query: 79  IDRILKYTCCGTACLIVAYIYIERYLQKMDVYLTSLNVHRLLITSIMVAAKFTD------ 138
            +RI KY+ C  +C ++A IY+ERYLQ+  VY+TSL+VHRLLITS++VAAKFTD      
Sbjct: 83  AERIFKYSECSPSCFVLALIYMERYLQQPHVYMTSLSVHRLLITSVVVAAKFTDDAFFNN 142

Query: 139 --------AGTKEMNSLEIEFLFNLDFRLHVTADVFSTHCLQLQKEVL 173
                     T EMN LE++ LFNLDFRL V  + F ++CLQL+KE +
Sbjct: 143 AFYARVGGISTVEMNRLELDLLFNLDFRLKVDLETFGSYCLQLEKETM 190

[Close]
BLAST of IVF0007508 vs. ExPASy Swiss-Prot
Match: Q8LB60 (Cyclin-U3-1 OS=Arabidopsis thaliana OX=3702 GN=CYCU3-1 PE=1 SV=2)

HSP 1 Score: 131.0 bits (328), Expect = 1.6e-29
Identity = 72/166 (43.37%), Postives = 95/166 (57.23%), Query Frame = 0 

Query: 19  LGLSESGKLISSSPQVLSILSSVFERSIQKNEKLLKRLKKKDNVTIFHSSRAPTMGIGQY 78
           LGL   GK +   P VLS LSS  ERS+  N      L   D+VT+F     P + I  Y
Sbjct: 19  LGLIIEGKRLKKPPTVLSRLSSSLERSLLLNHDDKILLGSPDSVTVFDGRSPPEISIAHY 78

Query: 79  IDRILKYTCCGTACLIVAYIYIERYLQKMDVYLTSLNVHRLLITSIMVAAKFTD------ 138
           +DRI KY+CC  +C ++A+IYI+ +L K    L  LNVHRL+IT++M+AAK  D      
Sbjct: 79  LDRIFKYSCCSPSCFVIAHIYIDHFLHKTRALLKPLNVHRLIITTVMLAAKVFDDRYFNN 138

Query: 139 --------AGTKEMNSLEIEFLFNLDFRLHVTADVFSTHCLQLQKE 171
                     T+E+N LE+E LF LDF+L V    F THC QL+K+
Sbjct: 139 AYYARVGGVTTRELNRLEMELLFTLDFKLQVDPQTFHTHCCQLEKQ 184

[Close]
BLAST of IVF0007508 vs. ExPASy Swiss-Prot
Match: Q9SHD3 (Cyclin-U2-1 OS=Arabidopsis thaliana OX=3702 GN=CYCU2-1 PE=1 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 2.3e-25
Identity = 63/165 (38.18%), Postives = 101/165 (61.21%), Query Frame = 0 

Query: 32  PQVLSILSSVFERSIQKNEKLLKRLKKKDNVTIFHSSRAPTMGIGQYIDRILKYTCCGTA 91
           P V+S+LSS+ ER++ +NE++ +         +F     P M I  Y++RI +YT  G +
Sbjct: 28  PLVISVLSSLIERTLARNERISRSYGGFGKTRVFDCREIPDMTIQSYLERIFRYTKAGPS 87

Query: 92  CLIVAYIYIERYLQKMDVYLTSL-NVHRLLITSIMVAAKFTD--------------AGTK 151
             +VAY+YI+R+ Q    +  SL NVHRLLIT+IM+A+K+ +                T+
Sbjct: 88  VYVVAYVYIDRFCQNNQGFRISLTNVHRLLITTIMIASKYVEDMNYKNSYFAKVGGLETE 147

Query: 152 EMNSLEIEFLFNLDFRLHVTADVFSTHCLQLQKEV-LGGENQVER 181
           ++N+LE+EFLF + F+LHV   VF ++C  L++EV +GG  Q+E+
Sbjct: 148 DLNNLELEFLFLMGFKLHVNVSVFESYCCHLEREVSIGGGYQIEK 192

[Close]
BLAST of IVF0007508 vs. ExPASy Swiss-Prot
Match: Q9LJ45 (Cyclin-U1-1 OS=Arabidopsis thaliana OX=3702 GN=CYCU1-1 PE=1 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 8.9e-25
Identity = 67/174 (38.51%), Postives = 104/174 (59.77%), Query Frame = 0 

Query: 14  ETDSLLGLSESGKLISSSPQVLSILSSVFERSIQKNEKLLKRLKK-KDNVTIFHSSRAPT 73
           E D ++G   + +  +++P+VL+I+S V E+ + +NE L K+ K    ++  FH  RAP+
Sbjct: 9   ELDPVVGPESATE--AATPRVLTIISHVMEKLVARNEWLAKQTKGFGKSLEAFHGVRAPS 68

Query: 74  MGIGQYIDRILKYTCCGTACLIVAYIYIERYLQKMDVYL-TSLNVHRLLITSIMVAAKFT 133
           + I +Y++RI KYT C  AC +V Y+YI+R   K    L  SLNVHRLL+T +M+AAK  
Sbjct: 69  ISIAKYLERIYKYTKCSPACFVVGYVYIDRLAHKHPGSLVVSLNVHRLLVTCVMIAAKIL 128

Query: 134 D--------------AGTKEMNSLEIEFLFNLDFRLHVTADVFSTHCLQLQKEV 172
           D                  ++N +E+E LF LDFR+ V+  VF ++C  L+KE+
Sbjct: 129 DDVHYNNEFYARVGGVSNADLNKMELELLFLLDFRVTVSFRVFESYCFHLEKEM 180

[Close]
BLAST of IVF0007508 vs. ExPASy Swiss-Prot
Match: O80513 (Cyclin-U4-1 OS=Arabidopsis thaliana OX=3702 GN=CYCU4-1 PE=1 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 1.5e-24
Identity = 61/154 (39.61%), Postives = 92/154 (59.74%), Query Frame = 0 

Query: 33  QVLSILSSVFERSIQKNEKLLKRLKKKDNVTIFHSSRAPTMGIGQYIDRILKYTCCGTAC 92
           ++++ LSS+ ER  + N+   +   +   V++FH    PT+ I  Y++RI KY  C  +C
Sbjct: 12  KLIAFLSSLLERVAESNDLTRRVATQSQRVSVFHGLSRPTITIQSYLERIFKYANCSPSC 71

Query: 93  LIVAYIYIERYLQKM-DVYLTSLNVHRLLITSIMVAAKFTD--------------AGTKE 152
            +VAY+Y++R+  +   + + S NVHRLLITS+MVAAKF D                TKE
Sbjct: 72  FVVAYVYLDRFTHRQPSLPINSFNVHRLLITSVMVAAKFLDDLYYNNAYYAKVGGISTKE 131

Query: 153 MNSLEIEFLFNLDFRLHVTADVFSTHCLQLQKEV 172
           MN LE++FLF L F L+VT + F+ +   LQKE+
Sbjct: 132 MNFLELDFLFGLGFELNVTPNTFNAYFSYLQKEM 165

[Close]
BLAST of IVF0007508 vs. ExPASy TrEMBL
Match: A0A1S3C004 (cyclin-P3-1 OS=Cucumis melo OX=3656 GN=LOC103495057 PE=3 SV=1)

HSP 1 Score: 385.6 bits (989), Expect = 1.3e-103
Identity = 202/216 (93.52%), Postives = 202/216 (93.52%), Query Frame = 0 

Query: 1   MREMANNSMDFQVETDSLLGLSESGKLISSSPQVLSILSSVFERSIQKNEKLLKRLKKKD 60
           MREMANNSMDFQVETDSLLGLSESGKLISSSPQVLSILSSVFERSIQKNEKLLKRLKKKD
Sbjct: 1   MREMANNSMDFQVETDSLLGLSESGKLISSSPQVLSILSSVFERSIQKNEKLLKRLKKKD 60

Query: 61  NVTIFHSSRAPTMGIGQYIDRILKYTCCGTACLIVAYIYIERYLQKMDVYLTSLNVHRLL 120
           NVTIFHSSRAPTMGIGQYIDRILKYTCCGTACLIVAYIYIERYLQKMDVYLTSLNVHRLL
Sbjct: 61  NVTIFHSSRAPTMGIGQYIDRILKYTCCGTACLIVAYIYIERYLQKMDVYLTSLNVHRLL 120

Query: 121 ITSIMVAAKFTDAG--------------TKEMNSLEIEFLFNLDFRLHVTADVFSTHCLQ 180
           ITSIMVAAKFTDAG              TKEMNSLEIEFLFNLDFRLHVTADVFSTHCLQ
Sbjct: 121 ITSIMVAAKFTDAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTADVFSTHCLQ 180

Query: 181 LQKEVLGGENQVERRPGNKARTKCLPQITGYTCSAI 203
           LQKEVLGGENQVERRPGNKARTKCLPQITGYTCSAI
Sbjct: 181 LQKEVLGGENQVERRPGNKARTKCLPQITGYTCSAI 216

[Close]
BLAST of IVF0007508 vs. ExPASy TrEMBL
Match: A6YTD1 (Cyclin-dependent kinase OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1)

HSP 1 Score: 385.6 bits (989), Expect = 1.3e-103
Identity = 202/216 (93.52%), Postives = 202/216 (93.52%), Query Frame = 0 

Query: 1   MREMANNSMDFQVETDSLLGLSESGKLISSSPQVLSILSSVFERSIQKNEKLLKRLKKKD 60
           MREMANNSMDFQVETDSLLGLSESGKLISSSPQVLSILSSVFERSIQKNEKLLKRLKKKD
Sbjct: 1   MREMANNSMDFQVETDSLLGLSESGKLISSSPQVLSILSSVFERSIQKNEKLLKRLKKKD 60

Query: 61  NVTIFHSSRAPTMGIGQYIDRILKYTCCGTACLIVAYIYIERYLQKMDVYLTSLNVHRLL 120
           NVTIFHSSRAPTMGIGQYIDRILKYTCCGTACLIVAYIYIERYLQKMDVYLTSLNVHRLL
Sbjct: 61  NVTIFHSSRAPTMGIGQYIDRILKYTCCGTACLIVAYIYIERYLQKMDVYLTSLNVHRLL 120

Query: 121 ITSIMVAAKFTDAG--------------TKEMNSLEIEFLFNLDFRLHVTADVFSTHCLQ 180
           ITSIMVAAKFTDAG              TKEMNSLEIEFLFNLDFRLHVTADVFSTHCLQ
Sbjct: 121 ITSIMVAAKFTDAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTADVFSTHCLQ 180

Query: 181 LQKEVLGGENQVERRPGNKARTKCLPQITGYTCSAI 203
           LQKEVLGGENQVERRPGNKARTKCLPQITGYTCSAI
Sbjct: 181 LQKEVLGGENQVERRPGNKARTKCLPQITGYTCSAI 216

[Close]
BLAST of IVF0007508 vs. ExPASy TrEMBL
Match: A0A5A7TWJ7 (Cyclin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold456G00220 PE=3 SV=1)

HSP 1 Score: 379.8 bits (974), Expect = 7.1e-102
Identity = 199/213 (93.43%), Postives = 199/213 (93.43%), Query Frame = 0 

Query: 4   MANNSMDFQVETDSLLGLSESGKLISSSPQVLSILSSVFERSIQKNEKLLKRLKKKDNVT 63
           MANNSMDFQVETDSLLGLSESGKLISSSPQVLSILSSVFERSIQKNEKLLKRLKKKDNVT
Sbjct: 1   MANNSMDFQVETDSLLGLSESGKLISSSPQVLSILSSVFERSIQKNEKLLKRLKKKDNVT 60

Query: 64  IFHSSRAPTMGIGQYIDRILKYTCCGTACLIVAYIYIERYLQKMDVYLTSLNVHRLLITS 123
           IFHSSRAPTMGIGQYIDRILKYTCCGTACLIVAYIYIERYLQKMDVYLTSLNVHRLLITS
Sbjct: 61  IFHSSRAPTMGIGQYIDRILKYTCCGTACLIVAYIYIERYLQKMDVYLTSLNVHRLLITS 120

Query: 124 IMVAAKFTDAG--------------TKEMNSLEIEFLFNLDFRLHVTADVFSTHCLQLQK 183
           IMVAAKFTDAG              TKEMNSLEIEFLFNLDFRLHVTADVFSTHCLQLQK
Sbjct: 121 IMVAAKFTDAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTADVFSTHCLQLQK 180

Query: 184 EVLGGENQVERRPGNKARTKCLPQITGYTCSAI 203
           EVLGGENQVERRPGNKARTKCLPQITGYTCSAI
Sbjct: 181 EVLGGENQVERRPGNKARTKCLPQITGYTCSAI 213

[Close]
BLAST of IVF0007508 vs. ExPASy TrEMBL
Match: A0A0A0LJL5 (Cyclin OS=Cucumis sativus OX=3659 GN=Csa_2G021730 PE=3 SV=1)

HSP 1 Score: 371.3 bits (952), Expect = 2.5e-99
Identity = 194/216 (89.81%), Postives = 197/216 (91.20%), Query Frame = 0 

Query: 1   MREMANNSMDFQVETDSLLGLSESGKLISSSPQVLSILSSVFERSIQKNEKLLKRLKKKD 60
           MREMANN MDFQVETDSLLGLSESGKLISSSPQVLSILSSVFE+ IQKNEKLLKRLKKKD
Sbjct: 1   MREMANNGMDFQVETDSLLGLSESGKLISSSPQVLSILSSVFEKLIQKNEKLLKRLKKKD 60

Query: 61  NVTIFHSSRAPTMGIGQYIDRILKYTCCGTACLIVAYIYIERYLQKMDVYLTSLNVHRLL 120
           +VTIFHSSRAPTMGIGQYIDRILKYTCCGTACL+VAYIYIERYLQK DVYLTSLNVHRLL
Sbjct: 61  SVTIFHSSRAPTMGIGQYIDRILKYTCCGTACLVVAYIYIERYLQKTDVYLTSLNVHRLL 120

Query: 121 ITSIMVAAKFTDAG--------------TKEMNSLEIEFLFNLDFRLHVTADVFSTHCLQ 180
           ITSIMVAAKF DAG              TKEMNSLEIEFLFNLDFRLHVTADVFSTHCLQ
Sbjct: 121 ITSIMVAAKFIDAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTADVFSTHCLQ 180

Query: 181 LQKEVLGGENQVERRPGNKARTKCLPQITGYTCSAI 203
           LQKEVLG ENQVERRPGNKARTKCLPQITGYTCSAI
Sbjct: 181 LQKEVLGAENQVERRPGNKARTKCLPQITGYTCSAI 216

[Close]
BLAST of IVF0007508 vs. ExPASy TrEMBL
Match: A0A6J1G2L7 (Cyclin OS=Cucurbita moschata OX=3662 GN=LOC111450231 PE=3 SV=1)

HSP 1 Score: 324.7 bits (831), Expect = 2.7e-85
Identity = 171/216 (79.17%), Postives = 180/216 (83.33%), Query Frame = 0 

Query: 1   MREMANNSMDFQVETDSLLGLSESGKLISSSPQVLSILSSVFERSIQKNEKLLKRLKKKD 60
           MR+MA+N  DFQVETDSLLGLSESGKLI SS +VLSILSS FERSIQKNEKLLKRLKKKD
Sbjct: 1   MRKMADNGKDFQVETDSLLGLSESGKLIPSSSRVLSILSSTFERSIQKNEKLLKRLKKKD 60

Query: 61  NVTIFHSSRAPTMGIGQYIDRILKYTCCGTACLIVAYIYIERYLQKMDVYLTSLNVHRLL 120
           +VTIFH SRAPTM  GQYIDRI KYTCCGT CL+VAYIYIERYLQKM  YLTSLNVHRLL
Sbjct: 61  SVTIFHGSRAPTMSTGQYIDRISKYTCCGTPCLVVAYIYIERYLQKMGAYLTSLNVHRLL 120

Query: 121 ITSIMVAAKFTDAG--------------TKEMNSLEIEFLFNLDFRLHVTADVFSTHCLQ 180
           ITSIMVAAKF DAG              TKEMNS+EIE LFNLDFRLHVTADVF  HCLQ
Sbjct: 121 ITSIMVAAKFNDAGCYNNAFYAKVGGVSTKEMNSMEIELLFNLDFRLHVTADVFRAHCLQ 180

Query: 181 LQKEVLGGENQVERRPGNKARTKCLPQITGYTCSAI 203
           LQKE L GENQ++RRPGNK RT+CLPQI  YTC AI
Sbjct: 181 LQKEGL-GENQIDRRPGNKTRTRCLPQIASYTCRAI 215

[Close]
BLAST of IVF0007508 vs. NCBI nr
Match: XP_008454704.1 (PREDICTED: cyclin-P3-1 [Cucumis melo] >XP_008454712.1 PREDICTED: cyclin-P3-1 [Cucumis melo] >XP_008454721.1 PREDICTED: cyclin-P3-1 [Cucumis melo] >XP_008454727.1 PREDICTED: cyclin-P3-1 [Cucumis melo] >XP_008454735.1 PREDICTED: cyclin-P3-1 [Cucumis melo] >XP_016901631.1 PREDICTED: cyclin-P3-1 [Cucumis melo] >ABR67416.1 cyclin-dependent kinase [Cucumis melo subsp. melo])

HSP 1 Score: 383 bits (983), Expect = 1.80e-133
Identity = 202/216 (93.52%), Postives = 202/216 (93.52%), Query Frame = 0 

Query: 1   MREMANNSMDFQVETDSLLGLSESGKLISSSPQVLSILSSVFERSIQKNEKLLKRLKKKD 60
           MREMANNSMDFQVETDSLLGLSESGKLISSSPQVLSILSSVFERSIQKNEKLLKRLKKKD
Sbjct: 1   MREMANNSMDFQVETDSLLGLSESGKLISSSPQVLSILSSVFERSIQKNEKLLKRLKKKD 60

Query: 61  NVTIFHSSRAPTMGIGQYIDRILKYTCCGTACLIVAYIYIERYLQKMDVYLTSLNVHRLL 120
           NVTIFHSSRAPTMGIGQYIDRILKYTCCGTACLIVAYIYIERYLQKMDVYLTSLNVHRLL
Sbjct: 61  NVTIFHSSRAPTMGIGQYIDRILKYTCCGTACLIVAYIYIERYLQKMDVYLTSLNVHRLL 120

Query: 121 ITSIMVAAKFTDAG--------------TKEMNSLEIEFLFNLDFRLHVTADVFSTHCLQ 180
           ITSIMVAAKFTDAG              TKEMNSLEIEFLFNLDFRLHVTADVFSTHCLQ
Sbjct: 121 ITSIMVAAKFTDAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTADVFSTHCLQ 180

Query: 181 LQKEVLGGENQVERRPGNKARTKCLPQITGYTCSAI 202
           LQKEVLGGENQVERRPGNKARTKCLPQITGYTCSAI
Sbjct: 181 LQKEVLGGENQVERRPGNKARTKCLPQITGYTCSAI 216

[Close]
BLAST of IVF0007508 vs. NCBI nr
Match: KAA0047963.1 (cyclin-P3-1 [Cucumis melo var. makuwa] >TYK18312.1 cyclin-P3-1 [Cucumis melo var. makuwa])

HSP 1 Score: 377 bits (968), Expect = 3.14e-131
Identity = 199/213 (93.43%), Postives = 199/213 (93.43%), Query Frame = 0 

Query: 4   MANNSMDFQVETDSLLGLSESGKLISSSPQVLSILSSVFERSIQKNEKLLKRLKKKDNVT 63
           MANNSMDFQVETDSLLGLSESGKLISSSPQVLSILSSVFERSIQKNEKLLKRLKKKDNVT
Sbjct: 1   MANNSMDFQVETDSLLGLSESGKLISSSPQVLSILSSVFERSIQKNEKLLKRLKKKDNVT 60

Query: 64  IFHSSRAPTMGIGQYIDRILKYTCCGTACLIVAYIYIERYLQKMDVYLTSLNVHRLLITS 123
           IFHSSRAPTMGIGQYIDRILKYTCCGTACLIVAYIYIERYLQKMDVYLTSLNVHRLLITS
Sbjct: 61  IFHSSRAPTMGIGQYIDRILKYTCCGTACLIVAYIYIERYLQKMDVYLTSLNVHRLLITS 120

Query: 124 IMVAAKFTDAG--------------TKEMNSLEIEFLFNLDFRLHVTADVFSTHCLQLQK 183
           IMVAAKFTDAG              TKEMNSLEIEFLFNLDFRLHVTADVFSTHCLQLQK
Sbjct: 121 IMVAAKFTDAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTADVFSTHCLQLQK 180

Query: 184 EVLGGENQVERRPGNKARTKCLPQITGYTCSAI 202
           EVLGGENQVERRPGNKARTKCLPQITGYTCSAI
Sbjct: 181 EVLGGENQVERRPGNKARTKCLPQITGYTCSAI 213

[Close]
BLAST of IVF0007508 vs. NCBI nr
Match: XP_004139180.1 (cyclin-P3-1 isoform X1 [Cucumis sativus] >XP_011648813.1 cyclin-P3-1 isoform X1 [Cucumis sativus] >XP_011648815.1 cyclin-P3-1 isoform X1 [Cucumis sativus] >XP_011648816.1 cyclin-P3-1 isoform X1 [Cucumis sativus] >XP_031737277.1 cyclin-P3-1 isoform X1 [Cucumis sativus] >KGN60902.1 hypothetical protein Csa_023421 [Cucumis sativus])

HSP 1 Score: 369 bits (946), Expect = 7.87e-128
Identity = 194/216 (89.81%), Postives = 197/216 (91.20%), Query Frame = 0 

Query: 1   MREMANNSMDFQVETDSLLGLSESGKLISSSPQVLSILSSVFERSIQKNEKLLKRLKKKD 60
           MREMANN MDFQVETDSLLGLSESGKLISSSPQVLSILSSVFE+ IQKNEKLLKRLKKKD
Sbjct: 1   MREMANNGMDFQVETDSLLGLSESGKLISSSPQVLSILSSVFEKLIQKNEKLLKRLKKKD 60

Query: 61  NVTIFHSSRAPTMGIGQYIDRILKYTCCGTACLIVAYIYIERYLQKMDVYLTSLNVHRLL 120
           +VTIFHSSRAPTMGIGQYIDRILKYTCCGTACL+VAYIYIERYLQK DVYLTSLNVHRLL
Sbjct: 61  SVTIFHSSRAPTMGIGQYIDRILKYTCCGTACLVVAYIYIERYLQKTDVYLTSLNVHRLL 120

Query: 121 ITSIMVAAKFTDAG--------------TKEMNSLEIEFLFNLDFRLHVTADVFSTHCLQ 180
           ITSIMVAAKF DAG              TKEMNSLEIEFLFNLDFRLHVTADVFSTHCLQ
Sbjct: 121 ITSIMVAAKFIDAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTADVFSTHCLQ 180

Query: 181 LQKEVLGGENQVERRPGNKARTKCLPQITGYTCSAI 202
           LQKEVLG ENQVERRPGNKARTKCLPQITGYTCSAI
Sbjct: 181 LQKEVLGAENQVERRPGNKARTKCLPQITGYTCSAI 216

[Close]
BLAST of IVF0007508 vs. NCBI nr
Match: XP_038886918.1 (cyclin-P3-1 [Benincasa hispida] >XP_038886919.1 cyclin-P3-1 [Benincasa hispida] >XP_038886920.1 cyclin-P3-1 [Benincasa hispida] >XP_038886922.1 cyclin-P3-1 [Benincasa hispida] >XP_038886923.1 cyclin-P3-1 [Benincasa hispida])

HSP 1 Score: 348 bits (894), Expect = 6.61e-120
Identity = 180/216 (83.33%), Postives = 189/216 (87.50%), Query Frame = 0 

Query: 1   MREMANNSMDFQVETDSLLGLSESGKLISSSPQVLSILSSVFERSIQKNEKLLKRLKKKD 60
           MRE+A+N MDFQVE DSLLGL ESGKLI SSP+VLSILS+VFERSIQKNEKLLKRLKKKD
Sbjct: 1   MREVADNGMDFQVEIDSLLGLGESGKLIPSSPRVLSILSTVFERSIQKNEKLLKRLKKKD 60

Query: 61  NVTIFHSSRAPTMGIGQYIDRILKYTCCGTACLIVAYIYIERYLQKMDVYLTSLNVHRLL 120
           NVTIFH SRAPTMGIGQYIDRILKYTCCGT CL+VAYIYIERYLQKMD YLT+LN+HRLL
Sbjct: 61  NVTIFHGSRAPTMGIGQYIDRILKYTCCGTPCLVVAYIYIERYLQKMDAYLTNLNIHRLL 120

Query: 121 ITSIMVAAKFTDAG--------------TKEMNSLEIEFLFNLDFRLHVTADVFSTHCLQ 180
           ITSIMVAAKF DAG              TKEMNSLEIEFLFNLDFRLHVTAD+FS HCLQ
Sbjct: 121 ITSIMVAAKFIDAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTADIFSNHCLQ 180

Query: 181 LQKEVLGGENQVERRPGNKARTKCLPQITGYTCSAI 202
           LQKE LGGENQV+ R GNK RTKCLPQITGYTCSAI
Sbjct: 181 LQKEALGGENQVDHRAGNKTRTKCLPQITGYTCSAI 216

[Close]
BLAST of IVF0007508 vs. NCBI nr
Match: XP_022946012.1 (cyclin-P3-1-like [Cucurbita moschata] >XP_022946013.1 cyclin-P3-1-like [Cucurbita moschata] >XP_023521765.1 cyclin-P3-1-like [Cucurbita pepo subsp. pepo] >XP_023545675.1 cyclin-P3-1 [Cucurbita pepo subsp. pepo] >XP_023545676.1 cyclin-P3-1 [Cucurbita pepo subsp. pepo] >KAG7030248.1 Cyclin-P3-1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 322 bits (825), Expect = 2.07e-109
Identity = 171/216 (79.17%), Postives = 180/216 (83.33%), Query Frame = 0 

Query: 1   MREMANNSMDFQVETDSLLGLSESGKLISSSPQVLSILSSVFERSIQKNEKLLKRLKKKD 60
           MR+MA+N  DFQVETDSLLGLSESGKLI SS +VLSILSS FERSIQKNEKLLKRLKKKD
Sbjct: 1   MRKMADNGKDFQVETDSLLGLSESGKLIPSSSRVLSILSSTFERSIQKNEKLLKRLKKKD 60

Query: 61  NVTIFHSSRAPTMGIGQYIDRILKYTCCGTACLIVAYIYIERYLQKMDVYLTSLNVHRLL 120
           +VTIFH SRAPTM  GQYIDRI KYTCCGT CL+VAYIYIERYLQKM  YLTSLNVHRLL
Sbjct: 61  SVTIFHGSRAPTMSTGQYIDRISKYTCCGTPCLVVAYIYIERYLQKMGAYLTSLNVHRLL 120

Query: 121 ITSIMVAAKFTDAG--------------TKEMNSLEIEFLFNLDFRLHVTADVFSTHCLQ 180
           ITSIMVAAKF DAG              TKEMNS+EIE LFNLDFRLHVTADVF  HCLQ
Sbjct: 121 ITSIMVAAKFNDAGCYNNAFYAKVGGVSTKEMNSMEIELLFNLDFRLHVTADVFRAHCLQ 180

Query: 181 LQKEVLGGENQVERRPGNKARTKCLPQITGYTCSAI 202
           LQKE LG ENQ++RRPGNK RT+CLPQI  YTC AI
Sbjct: 181 LQKEGLG-ENQIDRRPGNKTRTRCLPQIASYTCRAI 215

[Close]
BLAST of IVF0007508 vs. TAIR 10
Match: AT3G05327.1 (Cyclin family protein )

HSP 1 Score: 133.3 bits (334), Expect = 2.2e-31
Identity = 73/164 (44.51%), Postives = 103/164 (62.80%), Query Frame = 0 

Query: 29  SSSPQVLSILSSVFERSIQKNEKLL-KRLKKKDNVTIFHSSRAPTMGIGQYIDRILKYTC 88
           S+ P+V+++L+S  E+ IQKN+K    R  K D +T+FH S+AP++ I +Y +RI +Y  
Sbjct: 28  STPPRVITLLASTLEKMIQKNKKKFHTRHNKADEITMFHGSKAPSLSIYRYTERIHRYAQ 87

Query: 89  CGTACLIVAYIYIERYLQKMDV-----YLTSLNVHRLLITSIMVAAKFTD---------- 148
           C   C + A+ YI RYLQ+ +       LTSLNVHRLLITS++VAAKF +          
Sbjct: 88  CSPVCFVAAFAYILRYLQRPEATSTARRLTSLNVHRLLITSLLVAAKFLERQCYNNAYYA 147

Query: 149 ----AGTKEMNSLEIEFLFNLDFRLHVTADVFSTHCLQLQKEVL 173
                 T+EMN LE  FL ++DFRL++T + F  HCL LQKE +
Sbjct: 148 KIGGVSTEEMNRLERTFLVDVDFRLYITTETFEKHCLMLQKETV 191

[Close]
BLAST of IVF0007508 vs. TAIR 10
Match: AT3G63120.1 (cyclin p1;1 )

HSP 1 Score: 131.0 bits (328), Expect = 1.1e-30
Identity = 72/166 (43.37%), Postives = 95/166 (57.23%), Query Frame = 0 

Query: 19  LGLSESGKLISSSPQVLSILSSVFERSIQKNEKLLKRLKKKDNVTIFHSSRAPTMGIGQY 78
           LGL   GK +   P VLS LSS  ERS+  N      L   D+VT+F     P + I  Y
Sbjct: 19  LGLIIEGKRLKKPPTVLSRLSSSLERSLLLNHDDKILLGSPDSVTVFDGRSPPEISIAHY 78

Query: 79  IDRILKYTCCGTACLIVAYIYIERYLQKMDVYLTSLNVHRLLITSIMVAAKFTD------ 138
           +DRI KY+CC  +C ++A+IYI+ +L K    L  LNVHRL+IT++M+AAK  D      
Sbjct: 79  LDRIFKYSCCSPSCFVIAHIYIDHFLHKTRALLKPLNVHRLIITTVMLAAKVFDDRYFNN 138

Query: 139 --------AGTKEMNSLEIEFLFNLDFRLHVTADVFSTHCLQLQKE 171
                     T+E+N LE+E LF LDF+L V    F THC QL+K+
Sbjct: 139 AYYARVGGVTTRELNRLEMELLFTLDFKLQVDPQTFHTHCCQLEKQ 184

[Close]
BLAST of IVF0007508 vs. TAIR 10
Match: AT2G45080.1 (cyclin p3;1 )

HSP 1 Score: 117.1 bits (292), Expect = 1.7e-26
Identity = 63/165 (38.18%), Postives = 101/165 (61.21%), Query Frame = 0 

Query: 32  PQVLSILSSVFERSIQKNEKLLKRLKKKDNVTIFHSSRAPTMGIGQYIDRILKYTCCGTA 91
           P V+S+LSS+ ER++ +NE++ +         +F     P M I  Y++RI +YT  G +
Sbjct: 28  PLVISVLSSLIERTLARNERISRSYGGFGKTRVFDCREIPDMTIQSYLERIFRYTKAGPS 87

Query: 92  CLIVAYIYIERYLQKMDVYLTSL-NVHRLLITSIMVAAKFTD--------------AGTK 151
             +VAY+YI+R+ Q    +  SL NVHRLLIT+IM+A+K+ +                T+
Sbjct: 88  VYVVAYVYIDRFCQNNQGFRISLTNVHRLLITTIMIASKYVEDMNYKNSYFAKVGGLETE 147

Query: 152 EMNSLEIEFLFNLDFRLHVTADVFSTHCLQLQKEV-LGGENQVER 181
           ++N+LE+EFLF + F+LHV   VF ++C  L++EV +GG  Q+E+
Sbjct: 148 DLNNLELEFLFLMGFKLHVNVSVFESYCCHLEREVSIGGGYQIEK 192

[Close]
BLAST of IVF0007508 vs. TAIR 10
Match: AT3G21870.1 (cyclin p2;1 )

HSP 1 Score: 115.2 bits (287), Expect = 6.3e-26
Identity = 67/174 (38.51%), Postives = 104/174 (59.77%), Query Frame = 0 

Query: 14  ETDSLLGLSESGKLISSSPQVLSILSSVFERSIQKNEKLLKRLKK-KDNVTIFHSSRAPT 73
           E D ++G   + +  +++P+VL+I+S V E+ + +NE L K+ K    ++  FH  RAP+
Sbjct: 9   ELDPVVGPESATE--AATPRVLTIISHVMEKLVARNEWLAKQTKGFGKSLEAFHGVRAPS 68

Query: 74  MGIGQYIDRILKYTCCGTACLIVAYIYIERYLQKMDVYL-TSLNVHRLLITSIMVAAKFT 133
           + I +Y++RI KYT C  AC +V Y+YI+R   K    L  SLNVHRLL+T +M+AAK  
Sbjct: 69  ISIAKYLERIYKYTKCSPACFVVGYVYIDRLAHKHPGSLVVSLNVHRLLVTCVMIAAKIL 128

Query: 134 D--------------AGTKEMNSLEIEFLFNLDFRLHVTADVFSTHCLQLQKEV 172
           D                  ++N +E+E LF LDFR+ V+  VF ++C  L+KE+
Sbjct: 129 DDVHYNNEFYARVGGVSNADLNKMELELLFLLDFRVTVSFRVFESYCFHLEKEM 180

[Close]
BLAST of IVF0007508 vs. TAIR 10
Match: AT2G44740.1 (cyclin p4;1 )

HSP 1 Score: 114.4 bits (285), Expect = 1.1e-25
Identity = 61/154 (39.61%), Postives = 92/154 (59.74%), Query Frame = 0 

Query: 33  QVLSILSSVFERSIQKNEKLLKRLKKKDNVTIFHSSRAPTMGIGQYIDRILKYTCCGTAC 92
           ++++ LSS+ ER  + N+   +   +   V++FH    PT+ I  Y++RI KY  C  +C
Sbjct: 12  KLIAFLSSLLERVAESNDLTRRVATQSQRVSVFHGLSRPTITIQSYLERIFKYANCSPSC 71

Query: 93  LIVAYIYIERYLQKM-DVYLTSLNVHRLLITSIMVAAKFTD--------------AGTKE 152
            +VAY+Y++R+  +   + + S NVHRLLITS+MVAAKF D                TKE
Sbjct: 72  FVVAYVYLDRFTHRQPSLPINSFNVHRLLITSVMVAAKFLDDLYYNNAYYAKVGGISTKE 131

Query: 153 MNSLEIEFLFNLDFRLHVTADVFSTHCLQLQKEV 172
           MN LE++FLF L F L+VT + F+ +   LQKE+
Sbjct: 132 MNFLELDFLFGLGFELNVTPNTFNAYFSYLQKEM 165

The following BLAST results are available for this feature:
BLAST of IVF0007508 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q75HV05.9e-3750.00Cyclin-P3-1 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCP3-1 PE=3 SV=1[more]
Q8LB601.6e-2943.37Cyclin-U3-1 OS=Arabidopsis thaliana OX=3702 GN=CYCU3-1 PE=1 SV=2[more]
Q9SHD32.3e-2538.18Cyclin-U2-1 OS=Arabidopsis thaliana OX=3702 GN=CYCU2-1 PE=1 SV=1[more]
Q9LJ458.9e-2538.51Cyclin-U1-1 OS=Arabidopsis thaliana OX=3702 GN=CYCU1-1 PE=1 SV=1[more]
O805131.5e-2439.61Cyclin-U4-1 OS=Arabidopsis thaliana OX=3702 GN=CYCU4-1 PE=1 SV=1[more]
BLAST of IVF0007508 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3C0041.3e-10393.52cyclin-P3-1 OS=Cucumis melo OX=3656 GN=LOC103495057 PE=3 SV=1[more]
A6YTD11.3e-10393.52Cyclin-dependent kinase OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1[more]
A0A5A7TWJ77.1e-10293.43Cyclin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold456G00220 PE=3 SV... [more]
A0A0A0LJL52.5e-9989.81Cyclin OS=Cucumis sativus OX=3659 GN=Csa_2G021730 PE=3 SV=1[more]
A0A6J1G2L72.7e-8579.17Cyclin OS=Cucurbita moschata OX=3662 GN=LOC111450231 PE=3 SV=1[more]
BLAST of IVF0007508 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008454704.11.80e-13393.52PREDICTED: cyclin-P3-1 [Cucumis melo] >XP_008454712.1 PREDICTED: cyclin-P3-1 [Cu... [more]
KAA0047963.13.14e-13193.43cyclin-P3-1 [Cucumis melo var. makuwa] >TYK18312.1 cyclin-P3-1 [Cucumis melo var... [more]
XP_004139180.17.87e-12889.81cyclin-P3-1 isoform X1 [Cucumis sativus] >XP_011648813.1 cyclin-P3-1 isoform X1 ... [more]
XP_038886918.16.61e-12083.33cyclin-P3-1 [Benincasa hispida] >XP_038886919.1 cyclin-P3-1 [Benincasa hispida] ... [more]
XP_022946012.12.07e-10979.17cyclin-P3-1-like [Cucurbita moschata] >XP_022946013.1 cyclin-P3-1-like [Cucurbit... [more]
BLAST of IVF0007508 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G05327.12.2e-3144.51Cyclin family protein [more]
AT3G63120.11.1e-3043.37cyclin p1;1 [more]
AT2G45080.11.7e-2638.18cyclin p3;1 [more]
AT3G21870.16.3e-2638.51cyclin p2;1 [more]
AT2G44740.11.1e-2539.61cyclin p4;1 [more]
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013922Cyclin PHO80-likePFAMPF08613Cyclincoord: 50..153
e-value: 3.5E-17
score: 63.2
NoneNo IPR availableGENE3D1.10.472.10coord: 28..195
e-value: 1.7E-33
score: 117.9
NoneNo IPR availablePANTHERPTHR15615:SF80CYCLINcoord: 5..185
NoneNo IPR availablePANTHERPTHR15615UNCHARACTERIZEDcoord: 5..185
IPR036915Cyclin-like superfamilySUPERFAMILY47954Cyclin-likecoord: 79..154

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0007508.1IVF0007508.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0019901 protein kinase binding