Pay0018199 (gene) Melon (Payzawat) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.CTGCACCTCCGTCCCACGTTACGGTGAGCCATTTTCCATCTCTGCCTCTCTATGTTGTTAGATTTAGAATTTGGAGGTCTTCAACGAGCTGTCCAGCAAGGGTAAAAGTTGTTTCGGGTGATTTTTGGATAAGTACTGTAAATTGAGTTTGATTTTGGCGAGTTGAAACGAAGGACAGATTTGTTAGGGCGAAGATTTTGTAGTTTAAATGATTGAGAAACAATCTACACAAATTACCATTTTGTTTGTGGGGGTAGACATGACAATTAAAACATTAATTTTGACCTTCAAAATTGGGTGTGTTGATATTTCTATTCTTTTCATTGATGATATCCTTATTTTTCTTGTCCAGTTTTATTCAATTTTTTCTGGGTTCTTTGAGATTTTAGGGCAATTGATTTAATTTGGGTAGTTTGAATTCATAATTTTTCGATTAATTTTGAAAATTGGAATTAACTAGGGAAGAAAATGTCTACGTATGAGGACATAAAGCAGAGGAAAAAAAAAACCCTAATCTTTGTCTTCTACCCCTCCTTCTCTCTGTCACAGCCGTCGATCCCCTTTTCCCCTTTACAATTCATCTCCTTCTCCGACATCCTTCCCTCTAGCTGCGAATGCCACACTTAACCACGAGTTCGGCGCCAGACATCTTTTATGTGGTAGTTTACTTAGAAATCGTTGGTAATAAATTGTCACTGTTGAATTGTGTAAGCTATTCTTATGTTTTTGCATTCTTGTTTTATATAATATATATATCGCACTTAACTTCGTCATTAAAGCAATGCTCACTTCATAATTATCAAACGTGTGATATAAAAAGATGATGTTTGGAACATCAGTTTGCAAAAGTGATGTACATTTCTTGTGTGGTTGAAAAGGTTAGTAAGGAAATGTCTGACGGAGACGAGGAGTTACCGAGGGATGCTAAAATTGTGAAGACACTGTTGAAATCGATGGGGGTTGAAGATTATGAACCACGAGTTATACACCAGTTTCTTGAGCTGTGGTATCGTTATGTTGTTGACGTACTGACGGATGCACAAGTCTATTCGGAGCATGCCGGCAAGGCTGCCATTGATTGTGATGATGTGAAGCTTGCTATTCAGTCGAAAGTTAATTTCAGCTTCTCGCAACCTCCTCCAAGAGAGGTAACAATGGCTTCATAGTCCAAATTACATGTAATTTGAGTTGATAAAATGTCTGGACGCTTGATATCTGATACATGGTTTACTGAAAGGCATTTGAAACTGAATTATTTGAACGGCAATCCTGGATCCTGGTTAGTTGCAGTGTATCTTGGAATCAAATCATCGTCTTGTTAACTGAATTATTTGAATAATAATAATCTAGTTGTTATTAGGGTATGGTCTTAACGGGTCTGACGAGTTGTCTGGTCTATATATATATATAGCCTGGAAAAAAAAGGCTTAGAGGTGGTATGTACTTGTAGAAAGATCACACTCAGGCACATTTTTTTCTTTCTATCTTCTCTCCCTGGTGAAGAAAAGTGTTTAACCGTGACTTCATTTTCTGTCAGGTTCTTCTAGAGTTGGCTAGAAACAGGAATAAGATCCCATTGCCAAGGTCGATTGGCGGGCCTGGTATTGCCCTTCCACCCGATCAAGACACATTGCTCAGTCCCAATTATCAACTGGCAATCCCGAAGAAGCAAGCAGTCGAAACAATGGAAGAAACAGAGGAAGATGAAGGTGATGACACAGTTGTTCCATCCCAAGAACCCAGCTCATCAGAAGTACCTCAACAACATGCCCCACAAAGAGTATCTTTTCCATTGGCAAAACGTCCAAAATTAACATAG CTGCACCTCCGTCCCACGTTACGCCGTCGATCCCCTTTTCCCCTTTACAATTCATCTCCTTCTCCGACATCCTTCCCTCTAGCTGCGAATGCCACACTTAACCACGAGTTCGGCGCCAGACATCTTTTATGTGGTAGTTTACTTAGAAATCGTTGGTAATAAATTGTCACTGTTGAATTGTGTAAGCTATTCTTATGTTTTTGCATTCTTGTTTTATATAATATATATATCGCACTTAACTTCGTCATTAAAGCAATGCTCACTTCATAATTATCAAACGTGTGATATAAAAAGATGATGTTTGGAACATCAGTTTGCAAAAGTGATGTACATTTCTTGTGTGGTTGAAAAGGTTAGTAAGGAAATGTCTGACGGAGACGAGGAGTTACCGAGGGATGCTAAAATTGTGAAGACACTGTTGAAATCGATGGGGGTTGAAGATTATGAACCACGAGTTATACACCAGTTTCTTGAGCTGTGGTATCGTTATGTTGTTGACGTACTGACGGATGCACAAGTCTATTCGGAGCATGCCGGCAAGGCTGCCATTGATTGTGATGATGTGAAGCTTGCTATTCAGTCGAAAGTTAATTTCAGCTTCTCGCAACCTCCTCCAAGAGAGGTTCTTCTAGAGTTGGCTAGAAACAGGAATAAGATCCCATTGCCAAGGTCGATTGGCGGGCCTGGTATTGCCCTTCCACCCGATCAAGACACATTGCTCAGTCCCAATTATCAACTGGCAATCCCGAAGAAGCAAGCAGTCGAAACAATGGAAGAAACAGAGGAAGATGAAGGTGATGACACAGTTGTTCCATCCCAAGAACCCAGCTCATCAGAAGTACCTCAACAACATGCCCCACAAAGAGTATCTTTTCCATTGGCAAAACGTCCAAAATTAACATAG ATGTACATTTCTTGTGTGGTTGAAAAGGTTAGTAAGGAAATGTCTGACGGAGACGAGGAGTTACCGAGGGATGCTAAAATTGTGAAGACACTGTTGAAATCGATGGGGGTTGAAGATTATGAACCACGAGTTATACACCAGTTTCTTGAGCTGTGGTATCGTTATGTTGTTGACGTACTGACGGATGCACAAGTCTATTCGGAGCATGCCGGCAAGGCTGCCATTGATTGTGATGATGTGAAGCTTGCTATTCAGTCGAAAGTTAATTTCAGCTTCTCGCAACCTCCTCCAAGAGAGGTTCTTCTAGAGTTGGCTAGAAACAGGAATAAGATCCCATTGCCAAGGTCGATTGGCGGGCCTGGTATTGCCCTTCCACCCGATCAAGACACATTGCTCAGTCCCAATTATCAACTGGCAATCCCGAAGAAGCAAGCAGTCGAAACAATGGAAGAAACAGAGGAAGATGAAGGTGATGACACAGTTGTTCCATCCCAAGAACCCAGCTCATCAGAAGTACCTCAACAACATGCCCCACAAAGAGTATCTTTTCCATTGGCAAAACGTCCAAAATTAACATAG MYISCVVEKVSKEMSDGDEELPRDAKIVKTLLKSMGVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAGKAAIDCDDVKLAIQSKVNFSFSQPPPREVLLELARNRNKIPLPRSIGGPGIALPPDQDTLLSPNYQLAIPKKQAVETMEETEEDEGDDTVVPSQEPSSSEVPQQHAPQRVSFPLAKRPKLT Homology
BLAST of Pay0018199 vs. ExPASy Swiss-Prot
Match: Q9SYH2 (Transcription initiation factor TFIID subunit 9 OS=Arabidopsis thaliana OX=3702 GN=TAF9 PE=1 SV=1) HSP 1 Score: 256.1 bits (653), Expect = 3.1e-67 Identity = 132/181 (72.93%), Postives = 149/181 (82.32%), Query Frame = 0
BLAST of Pay0018199 vs. ExPASy Swiss-Prot
Match: Q17QQ4 (Transcription initiation factor TFIID subunit 9 OS=Bos taurus OX=9913 GN=TAF9 PE=2 SV=1) HSP 1 Score: 134.4 bits (337), Expect = 1.3e-30 Identity = 63/127 (49.61%), Postives = 91/127 (71.65%), Query Frame = 0
BLAST of Pay0018199 vs. ExPASy Swiss-Prot
Match: Q16594 (Transcription initiation factor TFIID subunit 9 OS=Homo sapiens OX=9606 GN=TAF9 PE=1 SV=1) HSP 1 Score: 134.4 bits (337), Expect = 1.3e-30 Identity = 63/127 (49.61%), Postives = 91/127 (71.65%), Query Frame = 0
BLAST of Pay0018199 vs. ExPASy Swiss-Prot
Match: Q8VI33 (Transcription initiation factor TFIID subunit 9 OS=Mus musculus OX=10090 GN=Taf9 PE=1 SV=1) HSP 1 Score: 134.4 bits (337), Expect = 1.3e-30 Identity = 63/127 (49.61%), Postives = 91/127 (71.65%), Query Frame = 0
BLAST of Pay0018199 vs. ExPASy Swiss-Prot
Match: Q5BKE0 (Transcription initiation factor TFIID subunit 9 OS=Rattus norvegicus OX=10116 GN=Taf9 PE=2 SV=1) HSP 1 Score: 132.5 bits (332), Expect = 5.1e-30 Identity = 62/127 (48.82%), Postives = 90/127 (70.87%), Query Frame = 0
BLAST of Pay0018199 vs. ExPASy TrEMBL
Match: A0A1S4E4D8 (transcription initiation factor TFIID subunit 9 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103500691 PE=3 SV=1) HSP 1 Score: 360.9 bits (925), Expect = 3.3e-96 Identity = 183/183 (100.00%), Postives = 183/183 (100.00%), Query Frame = 0
BLAST of Pay0018199 vs. ExPASy TrEMBL
Match: A0A1S3CGN5 (transcription initiation factor TFIID subunit 9 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103500691 PE=3 SV=1) HSP 1 Score: 354.4 bits (908), Expect = 3.0e-94 Identity = 179/179 (100.00%), Postives = 179/179 (100.00%), Query Frame = 0
BLAST of Pay0018199 vs. ExPASy TrEMBL
Match: A0A5A7UW56 (Transcription initiation factor TFIID subunit 9 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold347G001260 PE=3 SV=1) HSP 1 Score: 354.4 bits (908), Expect = 3.0e-94 Identity = 179/179 (100.00%), Postives = 179/179 (100.00%), Query Frame = 0
BLAST of Pay0018199 vs. ExPASy TrEMBL
Match: A0A0A0KAU5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G449470 PE=3 SV=1) HSP 1 Score: 344.4 bits (882), Expect = 3.2e-91 Identity = 174/179 (97.21%), Postives = 176/179 (98.32%), Query Frame = 0
BLAST of Pay0018199 vs. ExPASy TrEMBL
Match: A0A6J1GPP8 (transcription initiation factor TFIID subunit 9 OS=Cucurbita moschata OX=3662 GN=LOC111456006 PE=3 SV=1) HSP 1 Score: 326.6 bits (836), Expect = 6.8e-86 Identity = 167/181 (92.27%), Postives = 174/181 (96.13%), Query Frame = 0
BLAST of Pay0018199 vs. NCBI nr
Match: XP_016902840.1 (PREDICTED: transcription initiation factor TFIID subunit 9 isoform X1 [Cucumis melo]) HSP 1 Score: 360.9 bits (925), Expect = 6.7e-96 Identity = 183/183 (100.00%), Postives = 183/183 (100.00%), Query Frame = 0
BLAST of Pay0018199 vs. NCBI nr
Match: XP_008462302.1 (PREDICTED: transcription initiation factor TFIID subunit 9 isoform X2 [Cucumis melo] >XP_008462303.1 PREDICTED: transcription initiation factor TFIID subunit 9 isoform X2 [Cucumis melo] >KAA0059398.1 transcription initiation factor TFIID subunit 9 isoform X2 [Cucumis melo var. makuwa] >TYK03929.1 transcription initiation factor TFIID subunit 9 isoform X2 [Cucumis melo var. makuwa]) HSP 1 Score: 354.4 bits (908), Expect = 6.3e-94 Identity = 179/179 (100.00%), Postives = 179/179 (100.00%), Query Frame = 0
BLAST of Pay0018199 vs. NCBI nr
Match: XP_011659620.1 (transcription initiation factor TFIID subunit 9 [Cucumis sativus] >KGN45487.1 hypothetical protein Csa_015827 [Cucumis sativus]) HSP 1 Score: 344.4 bits (882), Expect = 6.5e-91 Identity = 174/179 (97.21%), Postives = 176/179 (98.32%), Query Frame = 0
BLAST of Pay0018199 vs. NCBI nr
Match: XP_022953465.1 (transcription initiation factor TFIID subunit 9 [Cucurbita moschata]) HSP 1 Score: 326.6 bits (836), Expect = 1.4e-85 Identity = 167/181 (92.27%), Postives = 174/181 (96.13%), Query Frame = 0
BLAST of Pay0018199 vs. NCBI nr
Match: XP_038896108.1 (transcription initiation factor TFIID subunit 9 [Benincasa hispida] >XP_038896109.1 transcription initiation factor TFIID subunit 9 [Benincasa hispida]) HSP 1 Score: 325.9 bits (834), Expect = 2.4e-85 Identity = 168/179 (93.85%), Postives = 171/179 (95.53%), Query Frame = 0
BLAST of Pay0018199 vs. TAIR 10
Match: AT1G54140.1 (TATA binding protein associated factor 21kDa subunit ) HSP 1 Score: 256.1 bits (653), Expect = 2.2e-68 Identity = 132/181 (72.93%), Postives = 149/181 (82.32%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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