Pay0018199 (gene) Melon (Payzawat) v1

Overview


Name	Pay0018199
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	transcription initiation factor TFIID subunit 9
Location	chr01: 35454919 .. 35456737 (-)
RNA-Seq Expression	Pay0018199
Synteny	Pay0018199

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CTGCACCTCCGTCCCACGTTACGGTGAGCCATTTTCCATCTCTGCCTCTCTATGTTGTTAGATTTAGAATTTGGAGGTCTTCAACGAGCTGTCCAGCAAGGGTAAAAGTTGTTTCGGGTGATTTTTGGATAAGTACTGTAAATTGAGTTTGATTTTGGCGAGTTGAAACGAAGGACAGATTTGTTAGGGCGAAGATTTTGTAGTTTAAATGATTGAGAAACAATCTACACAAATTACCATTTTGTTTGTGGGGGTAGACATGACAATTAAAACATTAATTTTGACCTTCAAAATTGGGTGTGTTGATATTTCTATTCTTTTCATTGATGATATCCTTATTTTTCTTGTCCAGTTTTATTCAATTTTTTCTGGGTTCTTTGAGATTTTAGGGCAATTGATTTAATTTGGGTAGTTTGAATTCATAATTTTTCGATTAATTTTGAAAATTGGAATTAACTAGGGAAGAAAATGTCTACGTATGAGGACATAAAGCAGAGGAAAAAAAAAACCCTAATCTTTGTCTTCTACCCCTCCTTCTCTCTGTCACAGCCGTCGATCCCCTTTTCCCCTTTACAATTCATCTCCTTCTCCGACATCCTTCCCTCTAGCTGCGAATGCCACACTTAACCACGAGTTCGGCGCCAGACATCTTTTATGTGGTAGTTTACTTAGAAATCGTTGGTAATAAATTGTCACTGTTGAATTGTGTAAGCTATTCTTATGTTTTTGCATTCTTGTTTTATATAATATATATATCGCACTTAACTTCGTCATTAAAGCAATGCTCACTTCATAATTATCAAACGTGTGATATAAAAAGATGATGTTTGGAACATCAGTTTGCAAAAGTGATGTACATTTCTTGTGTGGTTGAAAAGGTTAGTAAGGAAATGTCTGACGGAGACGAGGAGTTACCGAGGGATGCTAAAATTGTGAAGACACTGTTGAAATCGATGGGGGTTGAAGATTATGAACCACGAGTTATACACCAGTTTCTTGAGCTGTGGTATCGTTATGTTGTTGACGTACTGACGGATGCACAAGTCTATTCGGAGCATGCCGGCAAGGCTGCCATTGATTGTGATGATGTGAAGCTTGCTATTCAGTCGAAAGTTAATTTCAGCTTCTCGCAACCTCCTCCAAGAGAGGTAACAATGGCTTCATAGTCCAAATTACATGTAATTTGAGTTGATAAAATGTCTGGACGCTTGATATCTGATACATGGTTTACTGAAAGGCATTTGAAACTGAATTATTTGAACGGCAATCCTGGATCCTGGTTAGTTGCAGTGTATCTTGGAATCAAATCATCGTCTTGTTAACTGAATTATTTGAATAATAATAATCTAGTTGTTATTAGGGTATGGTCTTAACGGGTCTGACGAGTTGTCTGGTCTATATATATATATAGCCTGGAAAAAAAAGGCTTAGAGGTGGTATGTACTTGTAGAAAGATCACACTCAGGCACATTTTTTTCTTTCTATCTTCTCTCCCTGGTGAAGAAAAGTGTTTAACCGTGACTTCATTTTCTGTCAGGTTCTTCTAGAGTTGGCTAGAAACAGGAATAAGATCCCATTGCCAAGGTCGATTGGCGGGCCTGGTATTGCCCTTCCACCCGATCAAGACACATTGCTCAGTCCCAATTATCAACTGGCAATCCCGAAGAAGCAAGCAGTCGAAACAATGGAAGAAACAGAGGAAGATGAAGGTGATGACACAGTTGTTCCATCCCAAGAACCCAGCTCATCAGAAGTACCTCAACAACATGCCCCACAAAGAGTATCTTTTCCATTGGCAAAACGTCCAAAATTAACATAG

mRNA sequence

CTGCACCTCCGTCCCACGTTACGCCGTCGATCCCCTTTTCCCCTTTACAATTCATCTCCTTCTCCGACATCCTTCCCTCTAGCTGCGAATGCCACACTTAACCACGAGTTCGGCGCCAGACATCTTTTATGTGGTAGTTTACTTAGAAATCGTTGGTAATAAATTGTCACTGTTGAATTGTGTAAGCTATTCTTATGTTTTTGCATTCTTGTTTTATATAATATATATATCGCACTTAACTTCGTCATTAAAGCAATGCTCACTTCATAATTATCAAACGTGTGATATAAAAAGATGATGTTTGGAACATCAGTTTGCAAAAGTGATGTACATTTCTTGTGTGGTTGAAAAGGTTAGTAAGGAAATGTCTGACGGAGACGAGGAGTTACCGAGGGATGCTAAAATTGTGAAGACACTGTTGAAATCGATGGGGGTTGAAGATTATGAACCACGAGTTATACACCAGTTTCTTGAGCTGTGGTATCGTTATGTTGTTGACGTACTGACGGATGCACAAGTCTATTCGGAGCATGCCGGCAAGGCTGCCATTGATTGTGATGATGTGAAGCTTGCTATTCAGTCGAAAGTTAATTTCAGCTTCTCGCAACCTCCTCCAAGAGAGGTTCTTCTAGAGTTGGCTAGAAACAGGAATAAGATCCCATTGCCAAGGTCGATTGGCGGGCCTGGTATTGCCCTTCCACCCGATCAAGACACATTGCTCAGTCCCAATTATCAACTGGCAATCCCGAAGAAGCAAGCAGTCGAAACAATGGAAGAAACAGAGGAAGATGAAGGTGATGACACAGTTGTTCCATCCCAAGAACCCAGCTCATCAGAAGTACCTCAACAACATGCCCCACAAAGAGTATCTTTTCCATTGGCAAAACGTCCAAAATTAACATAG

Coding sequence (CDS)

ATGTACATTTCTTGTGTGGTTGAAAAGGTTAGTAAGGAAATGTCTGACGGAGACGAGGAGTTACCGAGGGATGCTAAAATTGTGAAGACACTGTTGAAATCGATGGGGGTTGAAGATTATGAACCACGAGTTATACACCAGTTTCTTGAGCTGTGGTATCGTTATGTTGTTGACGTACTGACGGATGCACAAGTCTATTCGGAGCATGCCGGCAAGGCTGCCATTGATTGTGATGATGTGAAGCTTGCTATTCAGTCGAAAGTTAATTTCAGCTTCTCGCAACCTCCTCCAAGAGAGGTTCTTCTAGAGTTGGCTAGAAACAGGAATAAGATCCCATTGCCAAGGTCGATTGGCGGGCCTGGTATTGCCCTTCCACCCGATCAAGACACATTGCTCAGTCCCAATTATCAACTGGCAATCCCGAAGAAGCAAGCAGTCGAAACAATGGAAGAAACAGAGGAAGATGAAGGTGATGACACAGTTGTTCCATCCCAAGAACCCAGCTCATCAGAAGTACCTCAACAACATGCCCCACAAAGAGTATCTTTTCCATTGGCAAAACGTCCAAAATTAACATAG

Protein sequence

MYISCVVEKVSKEMSDGDEELPRDAKIVKTLLKSMGVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAGKAAIDCDDVKLAIQSKVNFSFSQPPPREVLLELARNRNKIPLPRSIGGPGIALPPDQDTLLSPNYQLAIPKKQAVETMEETEEDEGDDTVVPSQEPSSSEVPQQHAPQRVSFPLAKRPKLT

Homology

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BLAST of Pay0018199 vs. ExPASy Swiss-Prot
Match: Q9SYH2 (Transcription initiation factor TFIID subunit 9 OS=Arabidopsis thaliana OX=3702 GN=TAF9 PE=1 SV=1)

HSP 1 Score: 256.1 bits (653), Expect = 3.1e-67
Identity = 132/181 (72.93%), Postives = 149/181 (82.32%), Query Frame = 0


Query: 16  DGDEELPRDAKIVKTLLKSMGVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAGKAAI 75
           +G+E++PRDAKIVK+LLKSMGVEDYEPRVIHQFLELWYRYVV+VLTDAQVYSEHA K  I
Sbjct: 4   EGEEDVPRDAKIVKSLLKSMGVEDYEPRVIHQFLELWYRYVVEVLTDAQVYSEHASKPNI 63

Query: 76  DCDDVKLAIQSKVNFSFSQPPPREVLLELARNRNKIPLPRSIGGPGIALPPDQDTLLSPN 135
           DCDDVKLAIQSKVNFSFSQPPPREVLLELA +RNKIPLP+SI GPG+ LPP+QDTLLSPN
Sbjct: 64  DCDDVKLAIQSKVNFSFSQPPPREVLLELAASRNKIPLPKSIAGPGVPLPPEQDTLLSPN 123

Query: 136 YQLAIPKKQAVETMEETEEDE------GDDTVVPSQEPSSSEVPQQHAPQRVSFPLAKRP 191
           YQL IPKK      EETE+DE              Q+  +S++P Q  PQRVSFPL++RP
Sbjct: 124 YQLVIPKKSVSTEPEETEDDEEMTDPGQSSQEQQQQQQQTSDLPSQ-TPQRVSFPLSRRP 183

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BLAST of Pay0018199 vs. ExPASy Swiss-Prot
Match: Q17QQ4 (Transcription initiation factor TFIID subunit 9 OS=Bos taurus OX=9913 GN=TAF9 PE=2 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 1.3e-30
Identity = 63/127 (49.61%), Postives = 91/127 (71.65%), Query Frame = 0


Query: 19  EELPRDAKIVKTLLKSMGVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAGKAAIDCD 78
           + +P+DA+++  +LK MG+ +YEPRVI+Q LE  +RYV  +L DA++YS HA KA +D D
Sbjct: 10  KSMPKDAQMMAQILKDMGITEYEPRVINQMLEFAFRYVTTILDDAKIYSSHAKKATVDAD 69

Query: 79  DVKLAIQSKVNFSFSQPPPREVLLELARNRNKIPLPRSIGGPGIALPPDQDTLLSPNYQL 138
           DV+LAIQ + + SF+ PPPR+ LL++AR RN+ PLP      G  LPPD+  L +PNY+L
Sbjct: 70  DVRLAIQCRADQSFTSPPPRDFLLDIARQRNQTPLPLIKPYSGPRLPPDRYCLTAPNYRL 129

Query: 139 AIPKKQA 146
              +K+A
Sbjct: 130 KSLQKKA 136

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BLAST of Pay0018199 vs. ExPASy Swiss-Prot
Match: Q16594 (Transcription initiation factor TFIID subunit 9 OS=Homo sapiens OX=9606 GN=TAF9 PE=1 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 1.3e-30
Identity = 63/127 (49.61%), Postives = 91/127 (71.65%), Query Frame = 0


Query: 19  EELPRDAKIVKTLLKSMGVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAGKAAIDCD 78
           + +P+DA+++  +LK MG+ +YEPRVI+Q LE  +RYV  +L DA++YS HA KA +D D
Sbjct: 10  KSMPKDAQMMAQILKDMGITEYEPRVINQMLEFAFRYVTTILDDAKIYSSHAKKATVDAD 69

Query: 79  DVKLAIQSKVNFSFSQPPPREVLLELARNRNKIPLPRSIGGPGIALPPDQDTLLSPNYQL 138
           DV+LAIQ + + SF+ PPPR+ LL++AR RN+ PLP      G  LPPD+  L +PNY+L
Sbjct: 70  DVRLAIQCRADQSFTSPPPRDFLLDIARQRNQTPLPLIKPYSGPRLPPDRYCLTAPNYRL 129

Query: 139 AIPKKQA 146
              +K+A
Sbjct: 130 KSLQKKA 136

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BLAST of Pay0018199 vs. ExPASy Swiss-Prot
Match: Q8VI33 (Transcription initiation factor TFIID subunit 9 OS=Mus musculus OX=10090 GN=Taf9 PE=1 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 1.3e-30
Identity = 63/127 (49.61%), Postives = 91/127 (71.65%), Query Frame = 0


Query: 19  EELPRDAKIVKTLLKSMGVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAGKAAIDCD 78
           + +P+DA+++  +LK MG+ +YEPRVI+Q LE  +RYV  +L DA++YS HA KA +D D
Sbjct: 10  KSMPKDAQMMAQILKDMGITEYEPRVINQMLEFAFRYVTTILDDAKIYSSHAKKATVDAD 69

Query: 79  DVKLAIQSKVNFSFSQPPPREVLLELARNRNKIPLPRSIGGPGIALPPDQDTLLSPNYQL 138
           DV+LAIQ + + SF+ PPPR+ LL++AR RN+ PLP      G  LPPD+  L +PNY+L
Sbjct: 70  DVRLAIQCRADQSFTSPPPRDFLLDIARQRNQTPLPLIKPYSGPRLPPDRYCLTAPNYRL 129

Query: 139 AIPKKQA 146
              +K+A
Sbjct: 130 KSLQKKA 136

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BLAST of Pay0018199 vs. ExPASy Swiss-Prot
Match: Q5BKE0 (Transcription initiation factor TFIID subunit 9 OS=Rattus norvegicus OX=10116 GN=Taf9 PE=2 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 5.1e-30
Identity = 62/127 (48.82%), Postives = 90/127 (70.87%), Query Frame = 0


Query: 19  EELPRDAKIVKTLLKSMGVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAGKAAIDCD 78
           + +P+DA+++  +LK MG+ +YEPRVI+Q LE  +RYV  +L DA++YS HA K  +D D
Sbjct: 10  KSMPKDAQMMAQILKDMGITEYEPRVINQMLEFAFRYVTTILDDAKIYSSHAKKPTVDAD 69

Query: 79  DVKLAIQSKVNFSFSQPPPREVLLELARNRNKIPLPRSIGGPGIALPPDQDTLLSPNYQL 138
           DV+LAIQ + + SF+ PPPR+ LL++AR RN+ PLP      G  LPPD+  L +PNY+L
Sbjct: 70  DVRLAIQCRADQSFTSPPPRDFLLDIARQRNQTPLPLIKPYSGPRLPPDRYCLTAPNYRL 129

Query: 139 AIPKKQA 146
              +K+A
Sbjct: 130 KSLQKKA 136

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BLAST of Pay0018199 vs. ExPASy TrEMBL
Match: A0A1S4E4D8 (transcription initiation factor TFIID subunit 9 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103500691 PE=3 SV=1)

HSP 1 Score: 360.9 bits (925), Expect = 3.3e-96
Identity = 183/183 (100.00%), Postives = 183/183 (100.00%), Query Frame = 0


Query: 10  VSKEMSDGDEELPRDAKIVKTLLKSMGVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEH 69
           VSKEMSDGDEELPRDAKIVKTLLKSMGVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEH
Sbjct: 16  VSKEMSDGDEELPRDAKIVKTLLKSMGVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEH 75

Query: 70  AGKAAIDCDDVKLAIQSKVNFSFSQPPPREVLLELARNRNKIPLPRSIGGPGIALPPDQD 129
           AGKAAIDCDDVKLAIQSKVNFSFSQPPPREVLLELARNRNKIPLPRSIGGPGIALPPDQD
Sbjct: 76  AGKAAIDCDDVKLAIQSKVNFSFSQPPPREVLLELARNRNKIPLPRSIGGPGIALPPDQD 135

Query: 130 TLLSPNYQLAIPKKQAVETMEETEEDEGDDTVVPSQEPSSSEVPQQHAPQRVSFPLAKRP 189
           TLLSPNYQLAIPKKQAVETMEETEEDEGDDTVVPSQEPSSSEVPQQHAPQRVSFPLAKRP
Sbjct: 136 TLLSPNYQLAIPKKQAVETMEETEEDEGDDTVVPSQEPSSSEVPQQHAPQRVSFPLAKRP 195

Query: 190 KLT 193
           KLT
Sbjct: 196 KLT 198

[Close]

BLAST of Pay0018199 vs. ExPASy TrEMBL
Match: A0A1S3CGN5 (transcription initiation factor TFIID subunit 9 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103500691 PE=3 SV=1)

HSP 1 Score: 354.4 bits (908), Expect = 3.0e-94
Identity = 179/179 (100.00%), Postives = 179/179 (100.00%), Query Frame = 0


Query: 14  MSDGDEELPRDAKIVKTLLKSMGVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAGKA 73
           MSDGDEELPRDAKIVKTLLKSMGVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAGKA
Sbjct: 1   MSDGDEELPRDAKIVKTLLKSMGVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAGKA 60

Query: 74  AIDCDDVKLAIQSKVNFSFSQPPPREVLLELARNRNKIPLPRSIGGPGIALPPDQDTLLS 133
           AIDCDDVKLAIQSKVNFSFSQPPPREVLLELARNRNKIPLPRSIGGPGIALPPDQDTLLS
Sbjct: 61  AIDCDDVKLAIQSKVNFSFSQPPPREVLLELARNRNKIPLPRSIGGPGIALPPDQDTLLS 120

Query: 134 PNYQLAIPKKQAVETMEETEEDEGDDTVVPSQEPSSSEVPQQHAPQRVSFPLAKRPKLT 193
           PNYQLAIPKKQAVETMEETEEDEGDDTVVPSQEPSSSEVPQQHAPQRVSFPLAKRPKLT
Sbjct: 121 PNYQLAIPKKQAVETMEETEEDEGDDTVVPSQEPSSSEVPQQHAPQRVSFPLAKRPKLT 179

[Close]

BLAST of Pay0018199 vs. ExPASy TrEMBL
Match: A0A5A7UW56 (Transcription initiation factor TFIID subunit 9 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold347G001260 PE=3 SV=1)

HSP 1 Score: 354.4 bits (908), Expect = 3.0e-94
Identity = 179/179 (100.00%), Postives = 179/179 (100.00%), Query Frame = 0


Query: 14  MSDGDEELPRDAKIVKTLLKSMGVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAGKA 73
           MSDGDEELPRDAKIVKTLLKSMGVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAGKA
Sbjct: 1   MSDGDEELPRDAKIVKTLLKSMGVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAGKA 60

Query: 74  AIDCDDVKLAIQSKVNFSFSQPPPREVLLELARNRNKIPLPRSIGGPGIALPPDQDTLLS 133
           AIDCDDVKLAIQSKVNFSFSQPPPREVLLELARNRNKIPLPRSIGGPGIALPPDQDTLLS
Sbjct: 61  AIDCDDVKLAIQSKVNFSFSQPPPREVLLELARNRNKIPLPRSIGGPGIALPPDQDTLLS 120

Query: 134 PNYQLAIPKKQAVETMEETEEDEGDDTVVPSQEPSSSEVPQQHAPQRVSFPLAKRPKLT 193
           PNYQLAIPKKQAVETMEETEEDEGDDTVVPSQEPSSSEVPQQHAPQRVSFPLAKRPKLT
Sbjct: 121 PNYQLAIPKKQAVETMEETEEDEGDDTVVPSQEPSSSEVPQQHAPQRVSFPLAKRPKLT 179

[Close]

BLAST of Pay0018199 vs. ExPASy TrEMBL
Match: A0A0A0KAU5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G449470 PE=3 SV=1)

HSP 1 Score: 344.4 bits (882), Expect = 3.2e-91
Identity = 174/179 (97.21%), Postives = 176/179 (98.32%), Query Frame = 0


Query: 14  MSDGDEELPRDAKIVKTLLKSMGVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAGKA 73
           MS+GDEELPRDAKIVKTLLKSMGVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAGKA
Sbjct: 1   MSEGDEELPRDAKIVKTLLKSMGVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAGKA 60

Query: 74  AIDCDDVKLAIQSKVNFSFSQPPPREVLLELARNRNKIPLPRSIGGPGIALPPDQDTLLS 133
           AIDCDDVKLAIQSKVNFSFSQPPPREVLLELARNRNKIPLPRSIGGPGIALPPDQDTLLS
Sbjct: 61  AIDCDDVKLAIQSKVNFSFSQPPPREVLLELARNRNKIPLPRSIGGPGIALPPDQDTLLS 120

Query: 134 PNYQLAIPKKQAVETMEETEEDEGDDTVVPSQEPSSSEVPQQHAPQRVSFPLAKRPKLT 193
           PNYQLAIPKKQAVETMEETEEDEGDDTV PSQEPSSSEVPQQHA QRVSFPLAKR K+T
Sbjct: 121 PNYQLAIPKKQAVETMEETEEDEGDDTVAPSQEPSSSEVPQQHASQRVSFPLAKRSKIT 179

[Close]

BLAST of Pay0018199 vs. ExPASy TrEMBL
Match: A0A6J1GPP8 (transcription initiation factor TFIID subunit 9 OS=Cucurbita moschata OX=3662 GN=LOC111456006 PE=3 SV=1)

HSP 1 Score: 326.6 bits (836), Expect = 6.8e-86
Identity = 167/181 (92.27%), Postives = 174/181 (96.13%), Query Frame = 0


Query: 12  KEMSDGDEELPRDAKIVKTLLKSMGVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAG 71
           KEMS+GDE+LPRDAKIVKTLLKSMGVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAG
Sbjct: 39  KEMSEGDEDLPRDAKIVKTLLKSMGVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAG 98

Query: 72  KAAIDCDDVKLAIQSKVNFSFSQPPPREVLLELARNRNKIPLPRSIGGPGIALPPDQDTL 131
           KAAIDCDDVKLAIQSKVNFSFSQPPPREVLLELARNRNKIPLPRSIGGPGIALPPDQDTL
Sbjct: 99  KAAIDCDDVKLAIQSKVNFSFSQPPPREVLLELARNRNKIPLPRSIGGPGIALPPDQDTL 158

Query: 132 LSPNYQLAIPKKQAVETMEETEEDEGDDTVVPSQEPSSSEVPQQHAPQRVSFPLAKRPKL 191
           LSPNYQLAIP+K+ VE MEETEEDEG D  VPSQEP S+EVPQQH PQRVSFPL+KRPK+
Sbjct: 159 LSPNYQLAIPRKRQVEAMEETEEDEGVD-AVPSQEP-STEVPQQHTPQRVSFPLSKRPKI 217

Query: 192 T 193
           T
Sbjct: 219 T 217

[Close]

BLAST of Pay0018199 vs. NCBI nr
Match: XP_016902840.1 (PREDICTED: transcription initiation factor TFIID subunit 9 isoform X1 [Cucumis melo])

HSP 1 Score: 360.9 bits (925), Expect = 6.7e-96
Identity = 183/183 (100.00%), Postives = 183/183 (100.00%), Query Frame = 0


Query: 10  VSKEMSDGDEELPRDAKIVKTLLKSMGVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEH 69
           VSKEMSDGDEELPRDAKIVKTLLKSMGVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEH
Sbjct: 16  VSKEMSDGDEELPRDAKIVKTLLKSMGVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEH 75

Query: 70  AGKAAIDCDDVKLAIQSKVNFSFSQPPPREVLLELARNRNKIPLPRSIGGPGIALPPDQD 129
           AGKAAIDCDDVKLAIQSKVNFSFSQPPPREVLLELARNRNKIPLPRSIGGPGIALPPDQD
Sbjct: 76  AGKAAIDCDDVKLAIQSKVNFSFSQPPPREVLLELARNRNKIPLPRSIGGPGIALPPDQD 135

Query: 130 TLLSPNYQLAIPKKQAVETMEETEEDEGDDTVVPSQEPSSSEVPQQHAPQRVSFPLAKRP 189
           TLLSPNYQLAIPKKQAVETMEETEEDEGDDTVVPSQEPSSSEVPQQHAPQRVSFPLAKRP
Sbjct: 136 TLLSPNYQLAIPKKQAVETMEETEEDEGDDTVVPSQEPSSSEVPQQHAPQRVSFPLAKRP 195

Query: 190 KLT 193
           KLT
Sbjct: 196 KLT 198

[Close]

BLAST of Pay0018199 vs. NCBI nr
Match: XP_008462302.1 (PREDICTED: transcription initiation factor TFIID subunit 9 isoform X2 [Cucumis melo] >XP_008462303.1 PREDICTED: transcription initiation factor TFIID subunit 9 isoform X2 [Cucumis melo] >KAA0059398.1 transcription initiation factor TFIID subunit 9 isoform X2 [Cucumis melo var. makuwa] >TYK03929.1 transcription initiation factor TFIID subunit 9 isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 354.4 bits (908), Expect = 6.3e-94
Identity = 179/179 (100.00%), Postives = 179/179 (100.00%), Query Frame = 0


Query: 14  MSDGDEELPRDAKIVKTLLKSMGVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAGKA 73
           MSDGDEELPRDAKIVKTLLKSMGVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAGKA
Sbjct: 1   MSDGDEELPRDAKIVKTLLKSMGVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAGKA 60

Query: 74  AIDCDDVKLAIQSKVNFSFSQPPPREVLLELARNRNKIPLPRSIGGPGIALPPDQDTLLS 133
           AIDCDDVKLAIQSKVNFSFSQPPPREVLLELARNRNKIPLPRSIGGPGIALPPDQDTLLS
Sbjct: 61  AIDCDDVKLAIQSKVNFSFSQPPPREVLLELARNRNKIPLPRSIGGPGIALPPDQDTLLS 120

Query: 134 PNYQLAIPKKQAVETMEETEEDEGDDTVVPSQEPSSSEVPQQHAPQRVSFPLAKRPKLT 193
           PNYQLAIPKKQAVETMEETEEDEGDDTVVPSQEPSSSEVPQQHAPQRVSFPLAKRPKLT
Sbjct: 121 PNYQLAIPKKQAVETMEETEEDEGDDTVVPSQEPSSSEVPQQHAPQRVSFPLAKRPKLT 179

[Close]

BLAST of Pay0018199 vs. NCBI nr
Match: XP_011659620.1 (transcription initiation factor TFIID subunit 9 [Cucumis sativus] >KGN45487.1 hypothetical protein Csa_015827 [Cucumis sativus])

HSP 1 Score: 344.4 bits (882), Expect = 6.5e-91
Identity = 174/179 (97.21%), Postives = 176/179 (98.32%), Query Frame = 0


Query: 14  MSDGDEELPRDAKIVKTLLKSMGVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAGKA 73
           MS+GDEELPRDAKIVKTLLKSMGVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAGKA
Sbjct: 1   MSEGDEELPRDAKIVKTLLKSMGVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAGKA 60

Query: 74  AIDCDDVKLAIQSKVNFSFSQPPPREVLLELARNRNKIPLPRSIGGPGIALPPDQDTLLS 133
           AIDCDDVKLAIQSKVNFSFSQPPPREVLLELARNRNKIPLPRSIGGPGIALPPDQDTLLS
Sbjct: 61  AIDCDDVKLAIQSKVNFSFSQPPPREVLLELARNRNKIPLPRSIGGPGIALPPDQDTLLS 120

Query: 134 PNYQLAIPKKQAVETMEETEEDEGDDTVVPSQEPSSSEVPQQHAPQRVSFPLAKRPKLT 193
           PNYQLAIPKKQAVETMEETEEDEGDDTV PSQEPSSSEVPQQHA QRVSFPLAKR K+T
Sbjct: 121 PNYQLAIPKKQAVETMEETEEDEGDDTVAPSQEPSSSEVPQQHASQRVSFPLAKRSKIT 179

[Close]

BLAST of Pay0018199 vs. NCBI nr
Match: XP_022953465.1 (transcription initiation factor TFIID subunit 9 [Cucurbita moschata])

HSP 1 Score: 326.6 bits (836), Expect = 1.4e-85
Identity = 167/181 (92.27%), Postives = 174/181 (96.13%), Query Frame = 0


Query: 12  KEMSDGDEELPRDAKIVKTLLKSMGVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAG 71
           KEMS+GDE+LPRDAKIVKTLLKSMGVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAG
Sbjct: 39  KEMSEGDEDLPRDAKIVKTLLKSMGVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAG 98

Query: 72  KAAIDCDDVKLAIQSKVNFSFSQPPPREVLLELARNRNKIPLPRSIGGPGIALPPDQDTL 131
           KAAIDCDDVKLAIQSKVNFSFSQPPPREVLLELARNRNKIPLPRSIGGPGIALPPDQDTL
Sbjct: 99  KAAIDCDDVKLAIQSKVNFSFSQPPPREVLLELARNRNKIPLPRSIGGPGIALPPDQDTL 158

Query: 132 LSPNYQLAIPKKQAVETMEETEEDEGDDTVVPSQEPSSSEVPQQHAPQRVSFPLAKRPKL 191
           LSPNYQLAIP+K+ VE MEETEEDEG D  VPSQEP S+EVPQQH PQRVSFPL+KRPK+
Sbjct: 159 LSPNYQLAIPRKRQVEAMEETEEDEGVD-AVPSQEP-STEVPQQHTPQRVSFPLSKRPKI 217

Query: 192 T 193
           T
Sbjct: 219 T 217

[Close]

BLAST of Pay0018199 vs. NCBI nr
Match: XP_038896108.1 (transcription initiation factor TFIID subunit 9 [Benincasa hispida] >XP_038896109.1 transcription initiation factor TFIID subunit 9 [Benincasa hispida])

HSP 1 Score: 325.9 bits (834), Expect = 2.4e-85
Identity = 168/179 (93.85%), Postives = 171/179 (95.53%), Query Frame = 0


Query: 14  MSDGDEELPRDAKIVKTLLKSMGVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAGKA 73
           MS+GDEELPRDAKIVKTLLKSMGVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAGKA
Sbjct: 1   MSEGDEELPRDAKIVKTLLKSMGVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAGKA 60

Query: 74  AIDCDDVKLAIQSKVNFSFSQPPPREVLLELARNRNKIPLPRSIGGPGIALPPDQDTLLS 133
           AIDCDDVKLAIQSKVNFSFSQPPPREVLLELAR+RNKIPLPR IGGPGIALPPDQDTLLS
Sbjct: 61  AIDCDDVKLAIQSKVNFSFSQPPPREVLLELARSRNKIPLPRLIGGPGIALPPDQDTLLS 120

Query: 134 PNYQLAIPKKQAVETMEETEEDEGDDTVVPSQEPSSSEVPQQHAPQRVSFPLAKRPKLT 193
           PNYQLAIPKKQ VETMEETEEDEGD   VPSQEP  SEVPQQH PQRVSFPLAKRPK+T
Sbjct: 121 PNYQLAIPKKQPVETMEETEEDEGDH-AVPSQEP-GSEVPQQHTPQRVSFPLAKRPKIT 177

[Close]

BLAST of Pay0018199 vs. TAIR 10
Match: AT1G54140.1 (TATA binding protein associated factor 21kDa subunit )

HSP 1 Score: 256.1 bits (653), Expect = 2.2e-68
Identity = 132/181 (72.93%), Postives = 149/181 (82.32%), Query Frame = 0


Query: 16  DGDEELPRDAKIVKTLLKSMGVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAGKAAI 75
           +G+E++PRDAKIVK+LLKSMGVEDYEPRVIHQFLELWYRYVV+VLTDAQVYSEHA K  I
Sbjct: 4   EGEEDVPRDAKIVKSLLKSMGVEDYEPRVIHQFLELWYRYVVEVLTDAQVYSEHASKPNI 63

Query: 76  DCDDVKLAIQSKVNFSFSQPPPREVLLELARNRNKIPLPRSIGGPGIALPPDQDTLLSPN 135
           DCDDVKLAIQSKVNFSFSQPPPREVLLELA +RNKIPLP+SI GPG+ LPP+QDTLLSPN
Sbjct: 64  DCDDVKLAIQSKVNFSFSQPPPREVLLELAASRNKIPLPKSIAGPGVPLPPEQDTLLSPN 123

Query: 136 YQLAIPKKQAVETMEETEEDE------GDDTVVPSQEPSSSEVPQQHAPQRVSFPLAKRP 191
           YQL IPKK      EETE+DE              Q+  +S++P Q  PQRVSFPL++RP
Sbjct: 124 YQLVIPKKSVSTEPEETEDDEEMTDPGQSSQEQQQQQQQTSDLPSQ-TPQRVSFPLSRRP 183

The following BLAST results are available for this feature:

BLAST of Pay0018199 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SYH2	3.1e-67	72.93	Transcription initiation factor TFIID subunit 9 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q17QQ4	1.3e-30	49.61	Transcription initiation factor TFIID subunit 9 OS=Bos taurus OX=9913 GN=TAF9 PE...	[more]
Q16594	1.3e-30	49.61	Transcription initiation factor TFIID subunit 9 OS=Homo sapiens OX=9606 GN=TAF9 ...	[more]
Q8VI33	1.3e-30	49.61	Transcription initiation factor TFIID subunit 9 OS=Mus musculus OX=10090 GN=Taf9...	[more]
Q5BKE0	5.1e-30	48.82	Transcription initiation factor TFIID subunit 9 OS=Rattus norvegicus OX=10116 GN...	[more]

BLAST of Pay0018199 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4E4D8	3.3e-96	100.00	transcription initiation factor TFIID subunit 9 isoform X1 OS=Cucumis melo OX=36...	[more]
A0A1S3CGN5	3.0e-94	100.00	transcription initiation factor TFIID subunit 9 isoform X2 OS=Cucumis melo OX=36...	[more]
A0A5A7UW56	3.0e-94	100.00	Transcription initiation factor TFIID subunit 9 isoform X2 OS=Cucumis melo var. ...	[more]
A0A0A0KAU5	3.2e-91	97.21	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G449470 PE=3 SV=1	[more]
A0A6J1GPP8	6.8e-86	92.27	transcription initiation factor TFIID subunit 9 OS=Cucurbita moschata OX=3662 GN...	[more]

BLAST of Pay0018199 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016902840.1	6.7e-96	100.00	PREDICTED: transcription initiation factor TFIID subunit 9 isoform X1 [Cucumis m...	[more]
XP_008462302.1	6.3e-94	100.00	PREDICTED: transcription initiation factor TFIID subunit 9 isoform X2 [Cucumis m...	[more]
XP_011659620.1	6.5e-91	97.21	transcription initiation factor TFIID subunit 9 [Cucumis sativus] >KGN45487.1 hy...	[more]
XP_022953465.1	1.4e-85	92.27	transcription initiation factor TFIID subunit 9 [Cucurbita moschata]	[more]
XP_038896108.1	2.4e-85	93.85	transcription initiation factor TFIID subunit 9 [Benincasa hispida] >XP_03889610...	[more]

BLAST of Pay0018199 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G54140.1	2.2e-68	72.93	TATA binding protein associated factor 21kDa subunit	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003162	Transcription initiation factor TAFII31	PFAM	PF02291	TFIID-31kDa	coord: 19..138 e-value: 8.1E-47 score: 158.3
IPR003162	Transcription initiation factor TAFII31	CDD	cd07979	TAF9	coord: 22..138 e-value: 3.82279E-66 score: 196.684
IPR009072	Histone-fold	GENE3D	1.10.20.10	Histone, subunit A	coord: 22..89 e-value: 1.1E-30 score: 107.6
IPR009072	Histone-fold	SUPERFAMILY	47113	Histone-fold	coord: 22..86
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 143..192
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 162..177
None	No IPR available	PANTHER	PTHR48068	TAF9 RNA POLYMERASE II, TATA BOX-BINDING PROTEIN (TBP)-ASSOCIATED FACTOR	coord: 11..179

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0018199.1	Pay0018199.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0043966	histone H3 acetylation
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
biological_process	GO:0051123	RNA polymerase II preinitiation complex assembly
biological_process	GO:0006352	DNA-templated transcription, initiation
cellular_component	GO:0000124	SAGA complex
cellular_component	GO:0005669	transcription factor TFIID complex
molecular_function	GO:0046982	protein heterodimerization activity
molecular_function	GO:0016251	RNA polymerase II general transcription initiation factor activity
molecular_function	GO:0003713	transcription coactivator activity