Pay0009518.1 (mRNA) Melon (Payzawat) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATCATAAGACCCTTTTGGGTAGAACCTTCTTAAACCCTAACCCCCAATTAGTTCAGATTCGCGCGTTTGAGTTCCCACGAATTTATGAAATTGAATGAAAAGGAATTATAGTCTTTGTATTGTGATCGAATTGTCAACAGAATTAGAGGCCCAACTCGATGTCCGGTAGGAAACAAGGTGAAGCGCCCGCTGATGAAGGTGGATCTGGACCATCTGGTAATAAGCCACCGCGCATCAAAATCTCAAAATCTTCTGAAGGAAGCGATGCCAAGGTTCTCATACTTGATCTTTCTGGCTGTTTTGAAAAGTAGATACTGTATTTACTTCTCAGACTCACCATTTGTTTCACTGATTGTTGACATTGGTACTCGTAGTTGAAGAGACATAATAGATTGCAAAATCCTTGAGTTGTATGTGGGTTTATATTTTCTAAATTTGTTTATCTATGTAAAATCTGTACCACATTGCACTAGCCCGTTTCATCTCAAGGCATTTTGTACTACTCTAGAATGCTAGCAGGAAGCTTAAAGATATGGAAATTTGCGTCCCAATTGTCTGTGGAACCATCGCATTTTACCTTGGCAGGAAGGCCAGCGAGTGAGTTTCCATTTTTCAGGTTTTGTTTCATTTCCCCTCCTCCTTTCAGGCATTTGGCTAATGAAGATTACCTAATTTTCCCTTTAGGTCCCAGTCACATAAATGGACAGTCTATGTGCGTGGTGCTACTAATGAGGATCTCGGGGTGGTGATAAAGAGAGTTGTGTTTCAGTTGCACCCTAGTTTTAATAACCCAACAAGAGTGGTTGAATCACCGCCTTTTGAGTTATCAGAATGTGGTTGGGGAGAATTTGAGATTGCCATCACACTTTTTTTCCACAGCGACGTCTGTGATAAACAATTAGATCTGTGAGTTATTGTTTTTATTTTCTCGTTGCATTGACTGTATTTTTATTGAATATGAAACAATCAGGAGACGGTAAAAATTATATCAAATGAGAAAGGAATAATAGGGGTATGTGATAGAGAGTTATTGAGCTCGAGTTATGGGGATAAGAAGCAAATCCTATTTTATGACTATTTTAAATTATTATAGGTTTCACCATCTGAAGTTGTACCCTGAAGATGAGTCTGGTCCCCAAACAACAAAGAAACCTGTTGTGGTGGAATCTTACAACGAAATTGTGTTTCCCGATCCATCCGAAATTTTTTTCTCTCGTGTTCAGAATCATCCAGCTGTTGTTGTGCCTCGGCTTCCTGCTGGTTTCAATCTACCTAATCCTGGTAATTGTCTGTTATTTTATCTTGCATACCTGTTGTTGCAGTTTCTATATTAATTCAATAATTGGCTGTATGCAGCATCAATTGAGAATATGGCAGAAAGGGAGAAAGGCGACACTAAGGATCATCCCCTTAGTCAATGGTTCCTGAATTTCTCAGAGGCAGACGAGCTGTTAAAACTTGCAGCTGCTCGCCAACAAGTATGAATATATATTTTTTACATTCACCTCAAAACCATATTTTCTCCTATTTCTTTATCGTTTGCTTTCTACTTGTTGAAATACTTTAGTTTCTAAAGAGAACACATTTCAGGCTTTCTACTACAACACCACAATGAACAGTGATTTTGTTAATGTACGTCTGATTTTTTTATAAGAGTTAATAGATGTTTGTTTGATGGTCTTCTTCATCTTTTTGGTGGCAGTGTATGTGTATATGTCAAACTGTGGAAAATTGAAGTCCACTTATAATTGACATTTCCTACTAGACTTTGCTGGATTTTAATTTTATCGTGAAATTTGATATGAAGTACATTTATACAAGAATATGGTTATGACTTATTAGTTTGTAGTTTATTATGTACTTGCACTTGTTTTCTAGTTGACTTTGTGCCTGTTGGTTCTGGTTACTCGATGTGTTAGTTCCAAATCAATCATTATTAGCTTATTTCTTTCTTTGTTGATCACGAGCATATTGGGAGGCTCATGATTAAGACTGTAGATTTTTGCATTAACATAATGGTTGATCTGCTAGGTGCAAGCTCATATTGTCAAATTGAGAAGACAACTCAGTGTGATGGATGGACTGCCTCAGTTCTCTAAACCAACTGCTGGTTATGGATTTACGTCATAAGCTGGAGGCTGATGGGAGTTAATCTATGTAATTAGGTTTACCTGCCAGTTCTCATGGTTCAGGTCAATGTAAACAATGATGTATTGATTTTTTTTTGAATTATTCATGCAGTTAAAGTAAATTAAAATAGGATTTGTCGCTCGTAGGAAATTTATTATTTCATTTGTGCTCCGGAGATACTTTTTAATCATCCGTTTTCTTATTGATTCAC ATCATAAGACCCTTTTGGGTAGAACCTTCTTAAACCCTAACCCCCAATTAGTTCAGATTCGCGCGTTTGAGTTCCCACGAATTTATGAAATTGAATGAAAAGGAATTATAGTCTTTGTATTGTGATCGAATTGTCAACAGAATTAGAGGCCCAACTCGATGTCCGGTAGGAAACAAGGTGAAGCGCCCGCTGATGAAGGTGGATCTGGACCATCTGGTAATAAGCCACCGCGCATCAAAATCTCAAAATCTTCTGAAGGAAGCGATGCCAAGAATGCTAGCAGGAAGCTTAAAGATATGGAAATTTGCGTCCCAATTGTCTGTGGAACCATCGCATTTTACCTTGGCAGGAAGGCCAGCGAGTCCCAGTCACATAAATGGACAGTCTATGTGCGTGGTGCTACTAATGAGGATCTCGGGGTGGTGATAAAGAGAGTTGTGTTTCAGTTGCACCCTAGTTTTAATAACCCAACAAGAGTGGTTGAATCACCGCCTTTTGAGTTATCAGAATGTGGTTGGGGAGAATTTGAGATTGCCATCACACTTTTTTTCCACAGCGACGTCTGTGATAAACAATTAGATCTGTTTCACCATCTGAAGTTGTACCCTGAAGATGAGTCTGGTCCCCAAACAACAAAGAAACCTGTTGTGGTGGAATCTTACAACGAAATTGTGTTTCCCGATCCATCCGAAATTTTTTTCTCTCGTGTTCAGAATCATCCAGCTGTTGTTGTGCCTCGGCTTCCTGCTGGTTTCAATCTACCTAATCCTGCATCAATTGAGAATATGGCAGAAAGGGAGAAAGGCGACACTAAGGATCATCCCCTTAGTCAATGGTTCCTGAATTTCTCAGAGGCAGACGAGCTGTTAAAACTTGCAGCTGCTCGCCAACAAGTGCAAGCTCATATTGTCAAATTGAGAAGACAACTCAGTGTGATGGATGGACTGCCTCAGTTCTCTAAACCAACTGCTGGTTATGGATTTACGTCATAAGCTGGAGGCTGATGGGAGTTAATCTATGTAATTAGGTTTACCTGCCAGTTCTCATGGTTCAGGTCAATGTAAACAATGATGTATTGATTTTTTTTTGAATTATTCATGCAGTTAAAGTAAATTAAAATAGGATTTGTCGCTCGTAGGAAATTTATTATTTCATTTGTGCTCCGGAGATACTTTTTAATCATCCGTTTTCTTATTGATTCAC ATGTCCGGTAGGAAACAAGGTGAAGCGCCCGCTGATGAAGGTGGATCTGGACCATCTGGTAATAAGCCACCGCGCATCAAAATCTCAAAATCTTCTGAAGGAAGCGATGCCAAGAATGCTAGCAGGAAGCTTAAAGATATGGAAATTTGCGTCCCAATTGTCTGTGGAACCATCGCATTTTACCTTGGCAGGAAGGCCAGCGAGTCCCAGTCACATAAATGGACAGTCTATGTGCGTGGTGCTACTAATGAGGATCTCGGGGTGGTGATAAAGAGAGTTGTGTTTCAGTTGCACCCTAGTTTTAATAACCCAACAAGAGTGGTTGAATCACCGCCTTTTGAGTTATCAGAATGTGGTTGGGGAGAATTTGAGATTGCCATCACACTTTTTTTCCACAGCGACGTCTGTGATAAACAATTAGATCTGTTTCACCATCTGAAGTTGTACCCTGAAGATGAGTCTGGTCCCCAAACAACAAAGAAACCTGTTGTGGTGGAATCTTACAACGAAATTGTGTTTCCCGATCCATCCGAAATTTTTTTCTCTCGTGTTCAGAATCATCCAGCTGTTGTTGTGCCTCGGCTTCCTGCTGGTTTCAATCTACCTAATCCTGCATCAATTGAGAATATGGCAGAAAGGGAGAAAGGCGACACTAAGGATCATCCCCTTAGTCAATGGTTCCTGAATTTCTCAGAGGCAGACGAGCTGTTAAAACTTGCAGCTGCTCGCCAACAAGTGCAAGCTCATATTGTCAAATTGAGAAGACAACTCAGTGTGATGGATGGACTGCCTCAGTTCTCTAAACCAACTGCTGGTTATGGATTTACGTCATAA MSGRKQGEAPADEGGSGPSGNKPPRIKISKSSEGSDAKNASRKLKDMEICVPIVCGTIAFYLGRKASESQSHKWTVYVRGATNEDLGVVIKRVVFQLHPSFNNPTRVVESPPFELSECGWGEFEIAITLFFHSDVCDKQLDLFHHLKLYPEDESGPQTTKKPVVVESYNEIVFPDPSEIFFSRVQNHPAVVVPRLPAGFNLPNPASIENMAEREKGDTKDHPLSQWFLNFSEADELLKLAAARQQVQAHIVKLRRQLSVMDGLPQFSKPTAGYGFTS Homology
BLAST of Pay0009518.1 vs. ExPASy Swiss-Prot
Match: Q9FH40 (Transcription initiation factor TFIID subunit 14b OS=Arabidopsis thaliana OX=3702 GN=TAF14B PE=1 SV=1) HSP 1 Score: 355.5 bits (911), Expect = 5.3e-97 Identity = 175/267 (65.54%), Postives = 213/267 (79.78%), Query Frame = 0
BLAST of Pay0009518.1 vs. ExPASy Swiss-Prot
Match: F4IPK2 (Transcription initiation factor TFIID subunit 14 OS=Arabidopsis thaliana OX=3702 GN=TAF14 PE=1 SV=1) HSP 1 Score: 327.8 bits (839), Expect = 1.2e-88 Identity = 153/238 (64.29%), Postives = 191/238 (80.25%), Query Frame = 0
BLAST of Pay0009518.1 vs. ExPASy Swiss-Prot
Match: Q755P0 (Protein AF-9 homolog OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) OX=284811 GN=YAF9 PE=3 SV=1) HSP 1 Score: 134.8 bits (338), Expect = 1.5e-30 Identity = 63/158 (39.87%), Postives = 100/158 (63.29%), Query Frame = 0
BLAST of Pay0009518.1 vs. ExPASy Swiss-Prot
Match: O95619 (YEATS domain-containing protein 4 OS=Homo sapiens OX=9606 GN=YEATS4 PE=1 SV=1) HSP 1 Score: 127.1 bits (318), Expect = 3.1e-28 Identity = 61/136 (44.85%), Postives = 89/136 (65.44%), Query Frame = 0
BLAST of Pay0009518.1 vs. ExPASy Swiss-Prot
Match: Q9CR11 (YEATS domain-containing protein 4 OS=Mus musculus OX=10090 GN=Yeats4 PE=2 SV=1) HSP 1 Score: 127.1 bits (318), Expect = 3.1e-28 Identity = 61/136 (44.85%), Postives = 89/136 (65.44%), Query Frame = 0
BLAST of Pay0009518.1 vs. ExPASy TrEMBL
Match: A0A5A7SJ54 (Transcription initiation factor TFIID subunit 14b isoform X3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G001410 PE=4 SV=1) HSP 1 Score: 560.5 bits (1443), Expect = 4.0e-156 Identity = 276/277 (99.64%), Postives = 276/277 (99.64%), Query Frame = 0
BLAST of Pay0009518.1 vs. ExPASy TrEMBL
Match: A0A1S3B2R3 (transcription initiation factor TFIID subunit 14b isoform X3 OS=Cucumis melo OX=3656 GN=LOC103485117 PE=4 SV=1) HSP 1 Score: 560.5 bits (1443), Expect = 4.0e-156 Identity = 276/277 (99.64%), Postives = 276/277 (99.64%), Query Frame = 0
BLAST of Pay0009518.1 vs. ExPASy TrEMBL
Match: A0A0A0KJC2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G505820 PE=4 SV=1) HSP 1 Score: 553.1 bits (1424), Expect = 6.5e-154 Identity = 273/277 (98.56%), Postives = 274/277 (98.92%), Query Frame = 0
BLAST of Pay0009518.1 vs. ExPASy TrEMBL
Match: A0A6J1IV07 (transcription initiation factor TFIID subunit 14b-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111478805 PE=4 SV=1) HSP 1 Score: 527.3 bits (1357), Expect = 3.8e-146 Identity = 258/276 (93.48%), Postives = 265/276 (96.01%), Query Frame = 0
BLAST of Pay0009518.1 vs. ExPASy TrEMBL
Match: A0A6J1GH06 (transcription initiation factor TFIID subunit 14b-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111453821 PE=4 SV=1) HSP 1 Score: 524.6 bits (1350), Expect = 2.5e-145 Identity = 257/276 (93.12%), Postives = 265/276 (96.01%), Query Frame = 0
BLAST of Pay0009518.1 vs. NCBI nr
Match: XP_008440809.1 (PREDICTED: transcription initiation factor TFIID subunit 14b isoform X3 [Cucumis melo] >KAA0025684.1 transcription initiation factor TFIID subunit 14b isoform X3 [Cucumis melo var. makuwa] >TYK12559.1 transcription initiation factor TFIID subunit 14b isoform X3 [Cucumis melo var. makuwa]) HSP 1 Score: 560.5 bits (1443), Expect = 8.3e-156 Identity = 276/277 (99.64%), Postives = 276/277 (99.64%), Query Frame = 0
BLAST of Pay0009518.1 vs. NCBI nr
Match: XP_004134869.1 (transcription initiation factor TFIID subunit 14b [Cucumis sativus] >KGN48904.1 hypothetical protein Csa_004327 [Cucumis sativus]) HSP 1 Score: 553.1 bits (1424), Expect = 1.3e-153 Identity = 273/277 (98.56%), Postives = 274/277 (98.92%), Query Frame = 0
BLAST of Pay0009518.1 vs. NCBI nr
Match: XP_038881078.1 (transcription initiation factor TFIID subunit 14b [Benincasa hispida]) HSP 1 Score: 538.5 bits (1386), Expect = 3.4e-149 Identity = 266/276 (96.38%), Postives = 269/276 (97.46%), Query Frame = 0
BLAST of Pay0009518.1 vs. NCBI nr
Match: XP_022979048.1 (transcription initiation factor TFIID subunit 14b-like isoform X1 [Cucurbita maxima]) HSP 1 Score: 527.3 bits (1357), Expect = 7.8e-146 Identity = 258/276 (93.48%), Postives = 265/276 (96.01%), Query Frame = 0
BLAST of Pay0009518.1 vs. NCBI nr
Match: KAG6603918.1 (Transcription initiation factor TFIID subunit 14b, partial [Cucurbita argyrosperma subsp. sororia] >KAG7034099.1 Transcription initiation factor TFIID subunit 14b [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 525.4 bits (1352), Expect = 3.0e-145 Identity = 257/276 (93.12%), Postives = 264/276 (95.65%), Query Frame = 0
BLAST of Pay0009518.1 vs. TAIR 10
Match: AT5G45600.1 (YEATS family protein ) HSP 1 Score: 355.5 bits (911), Expect = 3.8e-98 Identity = 175/267 (65.54%), Postives = 213/267 (79.78%), Query Frame = 0
BLAST of Pay0009518.1 vs. TAIR 10
Match: AT5G45600.2 (YEATS family protein ) HSP 1 Score: 355.5 bits (911), Expect = 3.8e-98 Identity = 175/267 (65.54%), Postives = 213/267 (79.78%), Query Frame = 0
BLAST of Pay0009518.1 vs. TAIR 10
Match: AT2G18000.2 (TBP-associated factor 14 ) HSP 1 Score: 327.8 bits (839), Expect = 8.5e-90 Identity = 153/238 (64.29%), Postives = 191/238 (80.25%), Query Frame = 0
BLAST of Pay0009518.1 vs. TAIR 10
Match: AT2G18000.1 (TBP-associated factor 14 ) HSP 1 Score: 253.8 bits (647), Expect = 1.6e-67 Identity = 115/171 (67.25%), Postives = 143/171 (83.63%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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