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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. CTACTTTTAAATATTAAGTACCAAACTTCATATTTTTTTCTATTACATTCTCTGAAACAGTGAATCTTATCACAATCTGTGTAGCAAAGTAATGGCGCAGGAAAATACTATTAATGAAGAAGTTCATGAATTGGAGGCCGATCCATCCAACAATTCTCTAACTGAAGTATTATTTTCTTTCCTCTAATTTTCTTCTACTGATTATTTGAATATGTACATATAATTTTTGTTCGTACTGATCATTTTTTGTATCTGAATGTGTGGGTAGAATAATTCTCTCTCTCTTTGATCTCATATAGAAGAACATCCTCTGAAAACTTTTGTACCACTGCATCTTTTTTCCACAATGGAAAATAGTTGGCACCTAAGCTTAAAAGTTTTATATACAAGTGGGATAATTTGAAACAAAAGGTATAGACTTCTTTTATATGATATATGAAAGATTTGCAAACCAACAAAGTGGTCTTTTTTTTTGGTTCACGTAATGCATCGATAATTCACGTAATTAAATTTAATTACTCCAAGGTTTGGGATAAGAAGTTGGTTATTATAATCTTTAAGGGTATGTTTGGGGTGGGGTTTTAGGAGGAAAAGAATTAGGAAATTGGGTCAAACCGTGTTTGGCCCAAGGATTATGATAAAGATGGATTAGGGTTATCCTAATCCCTAAATAACCCTATCTTATCCTATTTTTACTTTTTTACAACTCTACATTACCCTACCCAAACAATCCAATCAAAAATTTATTATTGTTTTTTAAATTACTACAATCATAACTCTTCTCCCAAACACATATTACCATAACACTACTATCATAATCCCTCCTCCAAACACATACCATCATAACACTACCTTTCATATTTTCTCTCCCAAACACATATTACCACAACACTACCAATAATAATCTATTCCTCAAACACATATTATCATAATACTAGGATTATCATAATCCTAGGATTATTATAATTCTTTTCTTCCATAACTCTTTCCTTCCCCCAAACACACCCTAATATTGTTGGGTTATAATAGTTTGTCTTTTAAGTGTAAATTATTTTGTTTTGATTATAATAGTATGTGTTTGAAGTTTAAATTACTATTTTAGATTGAGAAGAAAATAGTAGACATCAAAGCAAAAAAAAAAAAGAATATAAATGAGTAAAAATCGAAGCAAATAAGTTTTTTTGAAATAGCGTTTGACCGATGTAGTTATCATAGTGTCTTAGATAACTTTTGTAATGATAAACTGTTGAAGAAATTGGAACTAAATAAAGAGACACACTTGAAAGAAAGAAAGTTTTATTAAAACAATTTACAAATGATGGACACCTTTAGAGAGAACGCTCACTCACTTTCACTCAAATTTCTTACTAACTCTCTTTCTCTCTTCCTCACTTTGCTTACTTGCTTTGATTTTTGTTTGGTCCTCAAATGAGGATCACATCTCTATTTATAGGCATGAATTTCTTGGAGTCCAAGCCAAAAGAGTTCTTTAAAGTTCAACCTATTCTAATATTTATTTACATAATTCTATATATTTCTCTCTTATCCTTATCTAAAAGAATTCTCTAGAATTCTTTATTCTAAAAAATCGCTAAGATATTTTTAGGTTTCTTCTTTAGTTTACATAATTCTAGAATTTTAATATACTCATTTAATATCTCTAGAAGATTCTAGTTAGTGTTGCTATATACTTTAACATAAACATACATCTATTTTTATTCAGGTTCTAACGTCATTACGAACACTGAATAGCATTAAGGACCCTTCATCAGCTGGTCGTGCATTTCCCCAACGCATTGAAAGGAAACCTAAATCCGACGACAGCTTTATTGTCAAGAAGATCAAAAGCATTCGGGCAAAACTGTGTCGTTTTTTTTGTTTGTGCTAAATGACATTTTGCCATTCTTTCCTTGGTTCTTTTCAAGTTTAGAGCATTAGTATATGATGTAGTTTGTTATAAATTAACTTAATATATTCTTCTGTTTTAGCAAGGAT mRNA sequence CTACTTTTAAATATTAAGTACCAAACTTCATATTTTTTTCTATTACATTCTCTGAAACAGTGAATCTTATCACAATCTGTGTAGCAAAGTAATGGCGCAGGAAAATACTATTAATGAAGAAGTTCATGAATTGGAGGCCGATCCATCCAACAATTCTCTAACTGAAGTTCTAACGTCATTACGAACACTGAATAGCATTAAGGACCCTTCATCAGCTGGTCGTGCATTTCCCCAACGCATTGAAAGGAAACCTAAATCCGACGACAGCTTTATTGTCAAGAAGATCAAAAGCATTCGGGCAAAACTGTGTCGTTTTTTTTGTTTGTGCTAAATGACATTTTGCCATTCTTTCCTTGGTTCTTTTCAAGTTTAGAGCATTAGTATATGATGTAGTTTGTTATAAATTAACTTAATATATTCTTCTGTTTTAGCAAGGAT Coding sequence (CDS) ATGGCGCAGGAAAATACTATTAATGAAGAAGTTCATGAATTGGAGGCCGATCCATCCAACAATTCTCTAACTGAAGTTCTAACGTCATTACGAACACTGAATAGCATTAAGGACCCTTCATCAGCTGGTCGTGCATTTCCCCAACGCATTGAAAGGAAACCTAAATCCGACGACAGCTTTATTGTCAAGAAGATCAAAAGCATTCGGGCAAAACTGTGTCGTTTTTTTTGTTTGTGCTAA Protein sequence MAQENTINEEVHELEADPSNNSLTEVLTSLRTLNSIKDPSSAGRAFPQRIERKPKSDDSFIVKKIKSIRAKLCRFFCLC
Homology
BLAST of Pay0003471 vs. ExPASy TrEMBL
Match: A0A0A0KFH5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G361210 PE=4 SV=1) HSP 1 Score: 79.3 bits (194), Expect = 7.8e-12 Identity = 52/105 (49.52%), Postives = 62/105 (59.05%), Query Frame = 0
Query: 1 MAQENTINEEVHELEADPSNNSLTE-------------------------VLTSLRTLNS 60
MA+EN INEEVHELE+D SNNS T + +T NS
Sbjct: 1 MAKENIINEEVHELESDDSNNSHTSNDEVYPRKRQNCSHDFVEFGFKRCMSIKGFKTYNS 60
Query: 61 IKDPSSAGRAFPQRIERKPKSDDSFIVKKIKSIRAKLCRF-FCLC 80
K+ S AGRA P+R +RK KSD+SFIVKKI+S RAKLCRF F +C
Sbjct: 61 RKNYSPAGRALPERPKRKHKSDNSFIVKKIRSTRAKLCRFLFNIC 105
BLAST of Pay0003471 vs. NCBI nr
Match: KGN47559.1 (hypothetical protein Csa_019011 [Cucumis sativus]) HSP 1 Score: 79.3 bits (194), Expect = 1.6e-11 Identity = 52/105 (49.52%), Postives = 62/105 (59.05%), Query Frame = 0
Query: 1 MAQENTINEEVHELEADPSNNSLTE-------------------------VLTSLRTLNS 60
MA+EN INEEVHELE+D SNNS T + +T NS
Sbjct: 1 MAKENIINEEVHELESDDSNNSHTSNDEVYPRKRQNCSHDFVEFGFKRCMSIKGFKTYNS 60
Query: 61 IKDPSSAGRAFPQRIERKPKSDDSFIVKKIKSIRAKLCRF-FCLC 80
K+ S AGRA P+R +RK KSD+SFIVKKI+S RAKLCRF F +C
Sbjct: 61 RKNYSPAGRALPERPKRKHKSDNSFIVKKIRSTRAKLCRFLFNIC 105
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
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| A0A0A0KFH5 | 7.8e-12 | 49.52 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G361210 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| KGN47559.1 | 1.6e-11 | 49.52 | hypothetical protein Csa_019011 [Cucumis sativus] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
Relationships
The following mRNA feature(s) are a part of this gene:
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