Tan0013724 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGACGAGAAGAGAAGAAGAAGCAAGCTTGGGTCAAAGCACAAGCTCGTGGTCGGCCTCGGGCGACCACATGATGAAGCCCACTTTTGGGCATTGCCTTGGTCCCTCATAGCCCGTAGACCCTTGGTCCAACCCGATCCTTTCGTTCCCAATTGACGACGGAAGCCCACAAGAAAACCCTAGAGATGAGGTATTTAAAATCTCTTTTTAGGGGAGAGGAGGGTAAGTTCATTCCAACCGTCTAAACACTCATAAAACTCACAAATTTGCTCAATCTCTCTCTGACTTAAGAATCAGAGCTTGTGTGGTTTATACTACACCGATGTCTAGGATTTTCTTGTCTTGTACGCCACGTTCTTCCCCCAAAGAATACAAATTTACCACGGTTGTCGTATGGAGATCATGTATGTTCTTCTGTCCAAAACTTGGCAACAATTATTATTTTAATCGTTAAAGTATCAATTGGTTAGTTATGAAAGTTTAGGGCATGAGACTATTCACACTCAATTTTGAATAATTATGGCCAGATTTGAGTTTTGGTAATAATAGTAAAAATATACAAATATATGTACTTAGTTGTATAAATTACTAAAAAAAAAAAAAATAATAAAGAAATAAAAAAAAAAATACATTGACTGAGATTGTGCCATGTGGCTGGGCAGCAAAACTTATAAAAAAAAATGTTGTGCTCATGATTTTATACTTTAGAATCATACTCATTTAAGCACCCAACAATTTAATTTAATTTTCTTTAAAAAAAATGAATTAATGCTAACTATATTTGTTAAATTAAAATATTAAGCCATAAATGAAATATGGTTGAGAAGTAGGCGTAGGTGGGATGGAAAAGGAGAAATTAATAGGAGTGGCCATTTAGTGTGTAAACCTTCCACTTTATGATGCTATAAATACTACCAAAAAGGTTTGGCAAGGCACACACAACCATTCTTCTTTCTTTTGCCTTCCACACATTATCATTCCTCTTAAAACCAAAAGAAAATGAAGAAAATTTCAATCACAGGGCTTTGTCTTTTGGTGGCAGCAATGGTGGCGCTTCTTACCGGAGCTCGTCTCGCGGAGGCAGTGATTTGCAGCCCTTCGCAGCTGACCCCATGTGCCGGTGCGATCTCATACTCGACGAAGCCGTCGGCCGCATGCTGCAGTGTGTTGAAACAGCAGCAACCATGCCTTTGTAGGTATATAAATGATCCATCCTTGAAGCCTTATGTGAACTCTCCCGGAGCCAAACTGGTTCTTTCCAGCTGTCGCGTTCCCTTCCCCAGATGCTCCTAG ATGACGAGAAGAGAAGAAGAAGCAAGCTTGGGGCTTTGTCTTTTGGTGGCAGCAATGGTGGCGCTTCTTACCGGAGCTCGTCTCGCGGAGGCAGTGATTTGCAGCCCTTCGCAGCTGACCCCATGTGCCGGTGCGATCTCATACTCGACGAAGCCGTCGGCCGCATGCTGCAGTGTGTTGAAACAGCAGCAACCATGCCTTTGTAGGTATATAAATGATCCATCCTTGAAGCCTTATGTGAACTCTCCCGGAGCCAAACTGGTTCTTTCCAGCTGTCGCGTTCCCTTCCCCAGATGCTCCTAG ATGACGAGAAGAGAAGAAGAAGCAAGCTTGGGGCTTTGTCTTTTGGTGGCAGCAATGGTGGCGCTTCTTACCGGAGCTCGTCTCGCGGAGGCAGTGATTTGCAGCCCTTCGCAGCTGACCCCATGTGCCGGTGCGATCTCATACTCGACGAAGCCGTCGGCCGCATGCTGCAGTGTGTTGAAACAGCAGCAACCATGCCTTTGTAGGTATATAAATGATCCATCCTTGAAGCCTTATGTGAACTCTCCCGGAGCCAAACTGGTTCTTTCCAGCTGTCGCGTTCCCTTCCCCAGATGCTCCTAG MTRREEEASLGLCLLVAAMVALLTGARLAEAVICSPSQLTPCAGAISYSTKPSAACCSVLKQQQPCLCRYINDPSLKPYVNSPGAKLVLSSCRVPFPRCS Homology
BLAST of Tan0013724 vs. ExPASy Swiss-Prot
Match: Q43681 (Probable non-specific lipid-transfer protein AKCS9 OS=Vigna unguiculata OX=3917 PE=2 SV=1) HSP 1 Score: 100.5 bits (249), Expect = 1.1e-20 Identity = 49/99 (49.49%), Postives = 67/99 (67.68%), Query Frame = 0
BLAST of Tan0013724 vs. ExPASy Swiss-Prot
Match: P86809 (Non-specific lipid-transfer protein 2 OS=Apium graveolens var. rapaceum OX=278110 PE=1 SV=1) HSP 1 Score: 85.5 bits (210), Expect = 3.7e-16 Identity = 38/61 (62.30%), Postives = 47/61 (77.05%), Query Frame = 0
BLAST of Tan0013724 vs. ExPASy Swiss-Prot
Match: P82353 (Non-specific lipid-transfer protein 2 OS=Prunus armeniaca OX=36596 PE=1 SV=1) HSP 1 Score: 81.6 bits (200), Expect = 5.4e-15 Identity = 34/68 (50.00%), Postives = 46/68 (67.65%), Query Frame = 0
BLAST of Tan0013724 vs. ExPASy Swiss-Prot
Match: P20145 (Probable non-specific lipid-transfer protein OS=Hordeum vulgare OX=4513 GN=LTP2 PE=2 SV=1) HSP 1 Score: 80.1 bits (196), Expect = 1.6e-14 Identity = 41/99 (41.41%), Postives = 56/99 (56.57%), Query Frame = 0
BLAST of Tan0013724 vs. ExPASy Swiss-Prot
Match: A2XBN5 (Non-specific lipid-transfer protein 2 OS=Oryza sativa subsp. indica OX=39946 GN=LTP-2 PE=3 SV=2) HSP 1 Score: 77.8 bits (190), Expect = 7.8e-14 Identity = 41/91 (45.05%), Postives = 54/91 (59.34%), Query Frame = 0
BLAST of Tan0013724 vs. NCBI nr
Match: XP_022143278.1 (non-specific lipid-transfer protein 2-like [Momordica charantia]) HSP 1 Score: 122.5 bits (306), Expect = 2.1e-24 Identity = 59/89 (66.29%), Postives = 73/89 (82.02%), Query Frame = 0
BLAST of Tan0013724 vs. NCBI nr
Match: XP_038897809.1 (non-specific lipid-transfer protein 2-like [Benincasa hispida]) HSP 1 Score: 117.5 bits (293), Expect = 6.7e-23 Identity = 55/88 (62.50%), Postives = 68/88 (77.27%), Query Frame = 0
BLAST of Tan0013724 vs. NCBI nr
Match: AFK45248.1 (unknown [Lotus japonicus]) HSP 1 Score: 114.4 bits (285), Expect = 5.7e-22 Identity = 52/92 (56.52%), Postives = 69/92 (75.00%), Query Frame = 0
BLAST of Tan0013724 vs. NCBI nr
Match: XP_022955426.1 (non-specific lipid-transfer protein 2-like [Cucurbita moschata]) HSP 1 Score: 112.8 bits (281), Expect = 1.7e-21 Identity = 52/86 (60.47%), Postives = 69/86 (80.23%), Query Frame = 0
BLAST of Tan0013724 vs. NCBI nr
Match: KAG6581748.1 (hypothetical protein SDJN03_21750, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 112.5 bits (280), Expect = 2.2e-21 Identity = 52/86 (60.47%), Postives = 69/86 (80.23%), Query Frame = 0
BLAST of Tan0013724 vs. ExPASy TrEMBL
Match: A0A6J1CQB8 (non-specific lipid-transfer protein 2-like OS=Momordica charantia OX=3673 GN=LOC111013188 PE=4 SV=1) HSP 1 Score: 122.5 bits (306), Expect = 1.0e-24 Identity = 59/89 (66.29%), Postives = 73/89 (82.02%), Query Frame = 0
BLAST of Tan0013724 vs. ExPASy TrEMBL
Match: I3SYA6 (AAI domain-containing protein OS=Lotus japonicus OX=34305 PE=2 SV=1) HSP 1 Score: 114.4 bits (285), Expect = 2.8e-22 Identity = 52/92 (56.52%), Postives = 69/92 (75.00%), Query Frame = 0
BLAST of Tan0013724 vs. ExPASy TrEMBL
Match: A0A6J1GTR0 (non-specific lipid-transfer protein 2-like OS=Cucurbita moschata OX=3662 GN=LOC111457455 PE=4 SV=1) HSP 1 Score: 112.8 bits (281), Expect = 8.0e-22 Identity = 52/86 (60.47%), Postives = 69/86 (80.23%), Query Frame = 0
BLAST of Tan0013724 vs. ExPASy TrEMBL
Match: A0A2G9G3M3 (AAI domain-containing protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_27585 PE=4 SV=1) HSP 1 Score: 112.5 bits (280), Expect = 1.1e-21 Identity = 52/97 (53.61%), Postives = 73/97 (75.26%), Query Frame = 0
BLAST of Tan0013724 vs. ExPASy TrEMBL
Match: A0A5N5G8U2 (Non-specific lipid-transfer protein 2-like OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=D8674_019891 PE=3 SV=1) HSP 1 Score: 109.4 bits (272), Expect = 8.9e-21 Identity = 52/91 (57.14%), Postives = 63/91 (69.23%), Query Frame = 0
BLAST of Tan0013724 vs. TAIR 10
Match: AT3G18280.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 95.9 bits (237), Expect = 2.0e-20 Identity = 46/86 (53.49%), Postives = 62/86 (72.09%), Query Frame = 0
BLAST of Tan0013724 vs. TAIR 10
Match: AT1G48750.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 91.7 bits (226), Expect = 3.7e-19 Identity = 44/86 (51.16%), Postives = 62/86 (72.09%), Query Frame = 0
BLAST of Tan0013724 vs. TAIR 10
Match: AT1G73780.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 81.3 bits (199), Expect = 5.0e-16 Identity = 31/73 (42.47%), Postives = 51/73 (69.86%), Query Frame = 0
BLAST of Tan0013724 vs. TAIR 10
Match: AT5G38170.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 71.6 bits (174), Expect = 4.0e-13 Identity = 32/68 (47.06%), Postives = 38/68 (55.88%), Query Frame = 0
BLAST of Tan0013724 vs. TAIR 10
Match: AT1G66850.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 70.1 bits (170), Expect = 1.2e-12 Identity = 35/83 (42.17%), Postives = 48/83 (57.83%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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