PI0024763 (gene) Melon (PI 482460) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGGAAATAGCCTAAATGATAAAGATCAGTAAATAAATCTTGATATTGGAAAAAAGAAGAGCAAGGAAAATGGAATAAATGACAAAATTTCGGCTTTTAACCTCGTTCCCGCCAAAGTATCTCCTTGGTCAAGAACCGGCCATAAATTCCCGCCTCTTCTTAGTTCGTCACTTGAACTTCTCGATCTCTATCCGAATTCTCTCTCTCTCTCTCTCTGTCCCTCTCTTTGAATCGTGCTCGGAAGAATCATAGTCTCACAGGTACGCTTTAGAAATGGTTCTGAGCCACCAGATTTAGGGTTTGAGACCTTCTGCTACTTAGATCGTTCCGTTATTTAACTACTTGAATTTCTATATTGTATGCAAGATAGTTGCTGTGATAATCTTCTGTGAAATTGATCGAAATGTTTAATTTGATTGATTGTAATCTTCTTCGCACGAACAGTGTAATTGATTGCTGTTCTTGTAGTAGTTGTATGTTATGGTCGCCATATTAGCAATGGAAATTAAAATCGGTTTGCTTACAATCCTTTCCGTGTTTGTTTCTTTTAAAGTTGCATTCTGTTTCTGCACTTGTGCTATCGGTTAGTACTTTTATGATTCGGTTCTTATACGATTCTGTTATACCCATGCCATGAGTTGAACAGAGTTACTACAGGTCATGATCTCAATTGTCTGTTGTGCTAAATGTTATAGTTGCATAAAGTAGTTTGTTCCTGATGTTTTACCATTGAGACTAAAAGATGATGTTTATTTATTTGGTGAATGCCATTTTTCTTATGTAGAATAGAGTTCTTAATTTGCTTTCCGACGCTTTTGCTTTCTCCCTTGCATGTAGAAGGAGCGCTATCATCTTAGATTTATAAGGGGGAAATTCCTTTATTAAAATCTAAACATTGAACTTGTATCAACCTAAGCCTTTAACTTTGAGCATTGAATCAATTTAGACCTTTCCTATTAGAATTAGTTTTAATACTGTTGATGCATATTTTTCATAACTGCATGAGACTTTTCATTAAATTTAAGTTATCCTTTCATCCATTCATTTTTTCTAATGCTTTATTTATAAAGCATTACCGAGCTACTTTGGTAATGTGTTGAACAATATTATTTAGATGATTTTGAACTATTGATTGATTTGAATTTTTGAATTGATTCGCTTTTAGATTTTAAATTGATACAAATATAGTTTGAGGTTTTAATTATACAATCTCCAATTTAAGAGTATAAACTATAAACTGATATTTGCCTAGATTTATTCAATTTGTAAGTGTAGACTACACATGTTTCCAGTTAATTTAGTCTGGTTTGAACATTACACTGTCATGATCTTATCACACTAACTGTATAATCCTAAACATCATGTCATTCGTCATTGTTGGTTTTTCAGGATATGGATACGTCAAACCCTGCAGTTTTTGTTAATGGTGAGTTATTGAGCATGCATTGTGGAAGAAAGATTCGAGCAGTGGTTCAAGTTATCCAAAGCGCTGGTGGAATCGTTACGGGAAAATCTACGGATGAACAACAATTGACTATTCATGGCTTGCCCACAGTCCCTCACATGAACTTTGTAGAGGTAGTTGGTATTGCTGAGAGCAACAAGACCATCAAGGTTGAACACTGGACCGACTTTGGAACCACTTTTGGTATGTACTATAACCATTTCTTTCTGTTGTCCTATTATGGGTTGGTCTAGTAATAAAAAATGAGAGTCCTTGATAATATCTCACTGTTGCGAATGGGTTTGAAAGCTCAGCAAATGCCATTTGTTCTTTTCATGATCTATCTTTTCTCTTATCACTCGTAAATGCTAGATTACATATTAGACAGTTTTTTTTTTTTTTTTTTGTATGTTGACAAAGATTATTTTTTCTTTTATTCCATTGAGAATCATTGTGGAATTACCGAAAGAGAGAATGGGTTTTTGTGGCGTTTTGCCTTCCCTGAGTTGCCTCGTCTGTTGTTAAGGAGGAGCAGAGTTATACCCAATTTTGTTTGGGCTTTAATGATTTGTTTTCATGGACTAACTTGTAATATACCTATTTTTCAGATACTGAATCTTACAATCAGCTATGCCGACTTGCAAATGGGGAATTCAGAAGTTTATTTATTTAGTGATTTGTAGGTACGGCATGAGAAGAAGCAAGAGGTATAATTTGTTATGTGATTTTGAGTCTTCTATGCTTGTAACTCATGTGGAGTGCTGAACCACTAATCTCTTAAAAGAACTTGTGTTTTGGTATGTGTAGTGTACTAAGCTAGGAGTGAACTACAAAATTTCCATGGACTTTAGGGGTTTCAATTTCCCGGGTACTTTAATTCACATTTTTCACTAGAAAAAACCTTGGTGCACTTAAGCTTCATTCATCTCTTTTATAGCCCGGTTGTTATCCAATTAAAATGCGTTATCGGTATTGTTTCTTTTATTTGTGTGGTAAATAAGAACGGAGTTAGGTTGCATCTA TGGAAATAGCCTAAATGATAAAGATCAGTAAATAAATCTTGATATTGGAAAAAAGAAGAGCAAGGAAAATGGAATAAATGACAAAATTTCGGCTTTTAACCTCGTTCCCGCCAAAGTATCTCCTTGGTCAAGAACCGGCCATAAATTCCCGCCTCTTCTTAGTTCGTCACTTGAACTTCTCGATCTCTATCCGAATTCTCTCTCTCTCTCTCTCTGTCCCTCTCTTTGAATCGTGCTCGGAAGAATCATAGTCTCACAGGATATGGATACGTCAAACCCTGCAGTTTTTGTTAATGGTGAGTTATTGAGCATGCATTGTGGAAGAAAGATTCGAGCAGTGGTTCAAGTTATCCAAAGCGCTGGTGGAATCGTTACGGGAAAATCTACGGATGAACAACAATTGACTATTCATGGCTTGCCCACAGTCCCTCACATGAACTTTGTAGAGGTAGTTGGTATTGCTGAGAGCAACAAGACCATCAAGGTTGAACACTGGACCGACTTTGGAACCACTTTTGATACTGAATCTTACAATCAGCTATGCCGACTTGCAAATGGGGAATTCAGAAGTTTATTTATTTAGTGATTTGTAGGTACGGCATGAGAAGAAGCAAGAGGTATAATTTGTTATGTGATTTTGAGTCTTCTATGCTTGTAACTCATGTGGAGTGCTGAACCACTAATCTCTTAAAAGAACTTGTGTTTTGGTATGTGTAGTGTACTAAGCTAGGAGTGAACTACAAAATTTCCATGGACTTTAGGGGTTTCAATTTCCCGGGTACTTTAATTCACATTTTTCACTAGAAAAAACCTTGGTGCACTTAAGCTTCATTCATCTCTTTTATAGCCCGGTTGTTATCCAATTAAAATGCGTTATCGGTATTGTTTCTTTTATTTGTGTGGTAAATAAGAACGGAGTTAGGTTGCATCTA ATGGATACGTCAAACCCTGCAGTTTTTGTTAATGGTGAGTTATTGAGCATGCATTGTGGAAGAAAGATTCGAGCAGTGGTTCAAGTTATCCAAAGCGCTGGTGGAATCGTTACGGGAAAATCTACGGATGAACAACAATTGACTATTCATGGCTTGCCCACAGTCCCTCACATGAACTTTGTAGAGGTAGTTGGTATTGCTGAGAGCAACAAGACCATCAAGGTTGAACACTGGACCGACTTTGGAACCACTTTTGATACTGAATCTTACAATCAGCTATGCCGACTTGCAAATGGGGAATTCAGAAGTTTATTTATTTAG MDTSNPAVFVNGELLSMHCGRKIRAVVQVIQSAGGIVTGKSTDEQQLTIHGLPTVPHMNFVEVVGIAESNKTIKVEHWTDFGTTFDTESYNQLCRLANGEFRSLFI Homology
BLAST of PI0024763 vs. ExPASy Swiss-Prot
Match: Q6NLG7 (Replication protein A 14 kDa subunit B OS=Arabidopsis thaliana OX=3702 GN=RPA3B PE=1 SV=1) HSP 1 Score: 136.3 bits (342), Expect = 2.0e-31 Identity = 62/106 (58.49%), Postives = 83/106 (78.30%), Query Frame = 0
BLAST of PI0024763 vs. ExPASy Swiss-Prot
Match: Q9LXK1 (Replication protein A 14 kDa subunit A OS=Arabidopsis thaliana OX=3702 GN=RPA3A PE=3 SV=1) HSP 1 Score: 125.2 bits (313), Expect = 4.5e-28 Identity = 59/107 (55.14%), Postives = 78/107 (72.90%), Query Frame = 0
BLAST of PI0024763 vs. ExPASy Swiss-Prot
Match: Q9SDK9 (Replication protein A 14 kDa subunit OS=Oryza sativa subsp. japonica OX=39947 GN=RPA3 PE=1 SV=1) HSP 1 Score: 119.8 bits (299), Expect = 1.9e-26 Identity = 55/106 (51.89%), Postives = 73/106 (68.87%), Query Frame = 0
BLAST of PI0024763 vs. ExPASy TrEMBL
Match: A0A1S3BGM8 (replication protein A 14 kDa subunit B-like OS=Cucumis melo OX=3656 GN=LOC103489388 PE=3 SV=1) HSP 1 Score: 212.2 bits (539), Expect = 1.0e-51 Identity = 102/106 (96.23%), Postives = 104/106 (98.11%), Query Frame = 0
BLAST of PI0024763 vs. ExPASy TrEMBL
Match: A0A5A7SU42 (Replication protein A 14 kDa subunit B-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G001960 PE=3 SV=1) HSP 1 Score: 212.2 bits (539), Expect = 1.0e-51 Identity = 102/106 (96.23%), Postives = 104/106 (98.11%), Query Frame = 0
BLAST of PI0024763 vs. ExPASy TrEMBL
Match: A0A0A0KRF2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G614640 PE=3 SV=1) HSP 1 Score: 209.5 bits (532), Expect = 6.7e-51 Identity = 102/106 (96.23%), Postives = 103/106 (97.17%), Query Frame = 0
BLAST of PI0024763 vs. ExPASy TrEMBL
Match: A0A6J1JC99 (replication protein A 14 kDa subunit B-like OS=Cucurbita maxima OX=3661 GN=LOC111485454 PE=3 SV=1) HSP 1 Score: 186.8 bits (473), Expect = 4.6e-44 Identity = 89/106 (83.96%), Postives = 95/106 (89.62%), Query Frame = 0
BLAST of PI0024763 vs. ExPASy TrEMBL
Match: A0A6J1D9X1 (replication protein A 14 kDa subunit B-like OS=Momordica charantia OX=3673 GN=LOC111018714 PE=3 SV=1) HSP 1 Score: 174.9 bits (442), Expect = 1.8e-40 Identity = 82/106 (77.36%), Postives = 93/106 (87.74%), Query Frame = 0
BLAST of PI0024763 vs. NCBI nr
Match: XP_008446755.1 (PREDICTED: replication protein A 14 kDa subunit B-like [Cucumis melo] >XP_008446756.1 PREDICTED: replication protein A 14 kDa subunit B-like [Cucumis melo] >KAA0034652.1 replication protein A 14 kDa subunit B-like [Cucumis melo var. makuwa] >TYK09203.1 replication protein A 14 kDa subunit B-like [Cucumis melo var. makuwa]) HSP 1 Score: 212.2 bits (539), Expect = 2.1e-51 Identity = 102/106 (96.23%), Postives = 104/106 (98.11%), Query Frame = 0
BLAST of PI0024763 vs. NCBI nr
Match: XP_004135037.1 (replication protein A 14 kDa subunit B [Cucumis sativus] >XP_011655832.1 replication protein A 14 kDa subunit B [Cucumis sativus] >XP_031740923.1 replication protein A 14 kDa subunit B [Cucumis sativus] >KGN52188.1 hypothetical protein Csa_008262 [Cucumis sativus]) HSP 1 Score: 209.5 bits (532), Expect = 1.4e-50 Identity = 102/106 (96.23%), Postives = 103/106 (97.17%), Query Frame = 0
BLAST of PI0024763 vs. NCBI nr
Match: XP_038893019.1 (replication protein A 14 kDa subunit B-like [Benincasa hispida] >XP_038893020.1 replication protein A 14 kDa subunit B-like [Benincasa hispida]) HSP 1 Score: 201.4 bits (511), Expect = 3.8e-48 Identity = 98/106 (92.45%), Postives = 101/106 (95.28%), Query Frame = 0
BLAST of PI0024763 vs. NCBI nr
Match: XP_023539791.1 (replication protein A 14 kDa subunit B-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 189.9 bits (481), Expect = 1.1e-44 Identity = 90/106 (84.91%), Postives = 97/106 (91.51%), Query Frame = 0
BLAST of PI0024763 vs. NCBI nr
Match: KAG6601223.1 (Replication protein A 14 kDa subunit B, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 189.9 bits (481), Expect = 1.1e-44 Identity = 90/106 (84.91%), Postives = 96/106 (90.57%), Query Frame = 0
BLAST of PI0024763 vs. TAIR 10
Match: AT4G18590.1 (Nucleic acid-binding, OB-fold-like protein ) HSP 1 Score: 136.3 bits (342), Expect = 1.4e-32 Identity = 62/106 (58.49%), Postives = 83/106 (78.30%), Query Frame = 0
BLAST of PI0024763 vs. TAIR 10
Match: AT3G52630.1 (Nucleic acid-binding, OB-fold-like protein ) HSP 1 Score: 125.2 bits (313), Expect = 3.2e-29 Identity = 59/107 (55.14%), Postives = 78/107 (72.90%), Query Frame = 0
BLAST of PI0024763 vs. TAIR 10
Match: AT3G52630.2 (Nucleic acid-binding, OB-fold-like protein ) HSP 1 Score: 125.2 bits (313), Expect = 3.2e-29 Identity = 59/107 (55.14%), Postives = 78/107 (72.90%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|