PI0022944 (gene) Melon (PI 482460) v1

Overview
NamePI0022944
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionUnknown protein
Locationchr09: 11661102 .. 11661949 (+)
RNA-Seq ExpressionPI0022944
SyntenyPI0022944
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCACTCCCATCACTTCAACAGCTACACATGTCGGCAATGTCCCTCTACGCAAACCTTAAATCACTACTATTCGATCCTCTGATTCGCTCATACCCGAATCCTCAAGTACGTATCAGACCTCCTTCTTATAAACCACAAAATCCTTATCCCCATTTTATTTGAATCAAATTTTTTCATCCTTTTATAACCCAAACCCATACCCACCTCAATTTATTCCTCGACCTAATTTTCCAAATATTCCTCCAGCCCCTGCTATGTTTCCGTATCAGTTTGCTCCAAATCCTTATCCTTTACCTGATCAACCTCTTGTAGTGAAGTTAAATGATACTAATTTTTTATTATGGAAGAACCAATTGTTGAATGCGGTTCAAGTAAATGGCCTTGAAGGTTTCTTGAATGGTTCTATTCCAGCACCTCCAAAGTTTTTGGACGCCAACAATACACGGTTCAACCCTGAACATCAAACGTGGGAAAGGTATAATAATTTTATTATGTGTTGGATATATTCCTCTTTGTCTCCAGAAAATATGGGAGAAATTGTCAGTTTAGATTATGTCGCTGATATATGGAACTCGTTAATACGTTCTTATGATTCTAAAACTATGGCTCGCATTATGGGTTTAAATCTTGGTTACAAAGAATAAGAAAAGATAGGATGTTTGTAAGTCAATATTTATCTCAAATTAAAGAAGTTGTTGATAAATTTAGTGCGATTGGTGAACCTATGTCTTATCGTATCACTTGCCCACACATTAGATGCCTTAGGAAGTGAATATAATGCATTTGTGACCTTTATTCAAAATTGTTATAGGCTAAGGCTCGGCTGGAAAAGCAAAACTCTGTGA

mRNA sequence

ATGTCACTCCCATCACTTCAACAGCTACACATGTCGGCAATGTCCCTCTACGCAAACCTTAAATCACTACTATTCGATCCTCTGATTCGCTCATACCCGAATCCTCAAAACCAATTGTTGAATGCGGTTCAAGTAAATGGCCTTGAAGGTTTCTTGAATGGTTCTATTCCAGCACCTCCAAAGTTTTTGGACGCCAACAATACACGGTTCAACCCTGAACATCAAACGTGGGAAAGGCTAAGGCTCGGCTGGAAAAGCAAAACTCTGTGA

Coding sequence (CDS)

ATGTCACTCCCATCACTTCAACAGCTACACATGTCGGCAATGTCCCTCTACGCAAACCTTAAATCACTACTATTCGATCCTCTGATTCGCTCATACCCGAATCCTCAAAACCAATTGTTGAATGCGGTTCAAGTAAATGGCCTTGAAGGTTTCTTGAATGGTTCTATTCCAGCACCTCCAAAGTTTTTGGACGCCAACAATACACGGTTCAACCCTGAACATCAAACGTGGGAAAGGCTAAGGCTCGGCTGGAAAAGCAAAACTCTGTGA

Protein sequence

MSLPSLQQLHMSAMSLYANLKSLLFDPLIRSYPNPQNQLLNAVQVNGLEGFLNGSIPAPPKFLDANNTRFNPEHQTWERLRLGWKSKTL
Homology
[Close]
BLAST of PI0022944 vs. ExPASy TrEMBL
Match: A0A6J1DQX7 (uncharacterized protein LOC111022315 OS=Momordica charantia OX=3673 GN=LOC111022315 PE=4 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 1.8e-04
Identity = 24/44 (54.55%), Postives = 32/44 (72.73%), Query Frame = 0 

Query: 36 QNQLLNAVQVNGLEGFLNGSIPAPPKFLDANNTRFNPEHQTWER 80
          +NQLLNAV  NGL G+L+G+I  PP+FLD +  + NP +  WER
Sbjct: 43 KNQLLNAVIANGLRGYLDGTIMPPPQFLDHHQLQPNPAYYAWER 86

[Close]
BLAST of PI0022944 vs. NCBI nr
Match: XP_022155181.1 (uncharacterized protein LOC111022315 [Momordica charantia])

HSP 1 Score: 55.1 bits (131), Expect = 3.7e-04
Identity = 24/44 (54.55%), Postives = 32/44 (72.73%), Query Frame = 0 

Query: 36 QNQLLNAVQVNGLEGFLNGSIPAPPKFLDANNTRFNPEHQTWER 80
          +NQLLNAV  NGL G+L+G+I  PP+FLD +  + NP +  WER
Sbjct: 43 KNQLLNAVIANGLRGYLDGTIMPPPQFLDHHQLQPNPAYYAWER 86

The following BLAST results are available for this feature:
BLAST of PI0022944 vs.
Match NameE-valueIdentityDescription
BLAST of PI0022944 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1DQX71.8e-0454.55uncharacterized protein LOC111022315 OS=Momordica charantia OX=3673 GN=LOC111022... [more]
BLAST of PI0022944 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022155181.13.7e-0454.55uncharacterized protein LOC111022315 [Momordica charantia][more]
BLAST of PI0022944 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0022944.1PI0022944.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005488 binding