Homology
BLAST of PI0003197 vs. ExPASy Swiss-Prot
Match:
Q689D6 (Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Arabidopsis thaliana OX=3702 GN=RPD1 PE=1 SV=1)
HSP 1 Score: 597.0 bits (1538), Expect = 1.8e-169
Identity = 297/380 (78.16%), Postives = 332/380 (87.37%), Query Frame = 0
Query: 21 TTAYFLFNFTRSRSMSQSTSIPKNLQRVRDHGYDNYMEVEKKTRKVLKFQDLILSQYNQT 80
TT N + SQST+IPK RVRDHGYDNYMEVEKK RKV+KF LILSQ N T
Sbjct: 20 TTILPSINLILVKPFSQSTTIPKKQDRVRDHGYDNYMEVEKKIRKVVKFHSLILSQPNHT 79
Query: 81 IPVSRLDILARR--LGFKQHEAGAFVLKFPHVFEIYEHPVQRILYCRLTRQAHLQIAQQK 140
I +S LD LARR LGFKQHE GAF+LKFPHVFEIYEHPVQRILYCRLTR+A QI +
Sbjct: 80 IAISLLDTLARRLGLGFKQHEPGAFLLKFPHVFEIYEHPVQRILYCRLTRKALDQIRHEH 139
Query: 141 QAVIAQIPDAVTRLRKLLMMSNNGRLRLEHIRIARSEFGLPDDFEYSVVLKHPQFFRLFD 200
+AV+ QIPDAVTRLRKL+MMSN GR+RLEH+RIAR+EFGLP+DFEYSV+LKHPQFFRL D
Sbjct: 140 EAVLDQIPDAVTRLRKLVMMSNTGRIRLEHVRIARTEFGLPEDFEYSVILKHPQFFRLID 199
Query: 201 AKETRNKYIEIVERDPSLTVCAIERARERVYREKGSDAEDIRFSFIVNFPPGFKIGKYFR 260
+ETR+KYIEIVE+DP+L++CAIER RE YR KG DAED+RFSF+VNFPPGFKIGKYFR
Sbjct: 200 GEETRDKYIEIVEKDPNLSICAIERVREIEYRTKGIDAEDVRFSFVVNFPPGFKIGKYFR 259
Query: 261 IAMWKWQRLPYWSPYEDISEYDMRSIEAQKRMEKRAVATIHEMLSLTVEKKITLERIAHF 320
IA+WKWQRLPYWSPYEDIS YD+RS+EAQ R+EKR+VA IHE+LSLTVEKKITLERIAHF
Sbjct: 260 IAVWKWQRLPYWSPYEDISGYDLRSMEAQNRLEKRSVACIHELLSLTVEKKITLERIAHF 319
Query: 321 RLAMNLPKKLKDFLLQHQGIFYISTRGNFGKLHTVFLREGYRRSELVEPNDVYLARRKLA 380
R MNLPKKLK+FLLQHQGIFYISTRGN+GKLHTVFLREGY+R ELVEPNDVYLARR+LA
Sbjct: 320 RNVMNLPKKLKEFLLQHQGIFYISTRGNYGKLHTVFLREGYKRGELVEPNDVYLARRRLA 379
Query: 381 ELVLLSPRKANLDRELVGYR 399
ELVL+SPRKA +D ELV YR
Sbjct: 380 ELVLMSPRKAKVDAELVRYR 399
BLAST of PI0003197 vs. ExPASy Swiss-Prot
Match:
Q65XL5 (Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0571100 PE=2 SV=1)
HSP 1 Score: 164.1 bits (414), Expect = 3.8e-39
Identity = 138/433 (31.87%), Postives = 223/433 (51.50%), Query Frame = 0
Query: 45 LQRVRDHGYDNYMEVEKKTRKVLKFQDLILSQYNQTIPVSRLDILARRLGF-KQHEAGAF 104
++R ++ +DN ++ +KK + VLK +++++S ++ + + L R LG ++ A
Sbjct: 61 VKRRKEIPFDNVIQRDKKLKLVLKLRNILVSNPDRVMSLRDLGRFRRDLGLTRKRRLIAL 120
Query: 105 VLKFPHVFEIYEHPVQRILYCRLTRQAHLQIAQQKQAVIAQIPDAVTRLRKLLMMSNNGR 164
+ +FP VFE+ E V + + RLT A + AVT+LRKLLMMS + R
Sbjct: 121 LKRFPGVFEVVEEGVYSLRF-RLTPAAERLYLDELHLKNESEGLAVTKLRKLLMMSQDKR 180
Query: 165 LRLEHIRIARSEFGLPDDFEYSVVLKHPQFFRLFDAKETRNKYIEIVERDPSLTVCAIE- 224
+ +E I +++ GLP +F ++ L++PQ+FR+ + R +E+ DP L V A E
Sbjct: 181 ILIEKIAHLKNDLGLPPEFRDTICLRYPQYFRV--VQMDRGPGLELTHWDPELAVSAAEV 240
Query: 225 -----RARERVYREKGSDAEDIRFSFIVNFPPGFKI--GKYFRIAMWKWQRLPYWSPYED 284
RARE R D ++F+ V P G K+ G+ R+A +K +PY SPY D
Sbjct: 241 AEEENRAREEQERNLIID-RPLKFN-RVKLPQGLKLSRGEARRVAQFK--EMPYISPYSD 300
Query: 285 ISEYDMRSIEAQKRMEKRAVATIHEMLSLTVEKKITLERIAHFRLAMNLPKKLKDFLLQH 344
S +RS A+K EK A +HE+LSLT+EK+ ++ + HFR + L+ L++H
Sbjct: 301 FSH--LRSGSAEK--EKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQSLRGMLIRH 360
Query: 345 QGIFYISTRGNFGKLHTVFLREGYRRSELVEPNDVYLARRKLAELVLLS--PRKA----- 404
+FY+S +G+ +VFLRE Y+ S+LVE + + L + K+ LV + PR+
Sbjct: 361 PDMFYVSLKGD---RDSVFLREAYKNSQLVEKSKLVLLKEKMRALVAVPRFPRRGVPATS 420
Query: 405 -NLDRELVGYRRERVGYDMESFRTDYVKDKCDDFGVENKGNVRDV----LDSDIG--SDV 455
DR + G D+E + + D +D E G D D +G D
Sbjct: 421 EEADRTNGAAQMLSEGSDVEDDEDEGLSD-MEDLISEISGGKSDTDYHWGDGWVGENDDS 478
BLAST of PI0003197 vs. ExPASy Swiss-Prot
Match:
B6TTV8 (Protein WHAT'S THIS FACTOR 1, chloroplastic OS=Zea mays OX=4577 GN=WTF1 PE=1 SV=1)
HSP 1 Score: 163.7 bits (413), Expect = 5.0e-39
Identity = 129/418 (30.86%), Postives = 216/418 (51.67%), Query Frame = 0
Query: 45 LQRVRDHGYDNYMEVEKKTRKVLKFQDLILSQYNQTIPVSRLDILARRLGF-KQHEAGAF 104
++R ++ +D ++ +KK + VLK ++++++Q ++ + + L R LG ++ A
Sbjct: 55 VKRRKEAPFDTVIQRDKKLKLVLKLRNILVAQPDRVMSLRELGRFRRDLGLTRKRRLIAL 114
Query: 105 VLKFPHVFEIYEHPVQRILYCRLTRQAHLQIAQQKQAVIAQIPDAVTRLRKLLMMSNNGR 164
+ +FP VF++ E V + + RLT A + + AV +LRKLLMMS R
Sbjct: 115 LRRFPGVFDVVEEGVYSLRF-RLTPAAERLYLDELRLRNESEGLAVAKLRKLLMMSQEKR 174
Query: 165 LRLEHIRIARSEFGLPDDFEYSVVLKHPQFFRLFDAKETRNKYIEIVERDPSLTVCAIER 224
+ +E + + + GLP +F +V L++PQ+FR+ + R +E+ DP L V A E
Sbjct: 175 ILIEKVAHLKHDLGLPPEFRDTVCLRYPQYFRV--VRMDRGPALELTHWDPELAVSAAEL 234
Query: 225 ARERVYREKGSDAED--------IRFSFIVNFPPGFKI--GKYFRIAMWKWQRLPYWSPY 284
A E + +AE+ ++F+ V P G K+ G+ RIA +K +PY SPY
Sbjct: 235 AEE---ESRAREAEERNLIIDRPLKFN-RVRLPKGLKLTRGEARRIARFK--EMPYISPY 294
Query: 285 EDISEYDMRSIEAQKRMEKRAVATIHEMLSLTVEKKITLERIAHFRLAMNLPKKLKDFLL 344
D S +RS +K EK A +HE+LSLTVEK+ ++ + HFR + L+ ++
Sbjct: 295 ADFSH--LRSGSDEK--EKHACGVVHEILSLTVEKRTLVDHLTHFREEFRFSQSLRGMII 354
Query: 345 QHQGIFYISTRGNFGKLHTVFLREGYRRSELVEPNDVYLARRKLAELVLLS--PRKANLD 404
+H +FY+S +G+ +VFLRE Y+ S+LVE N + L + K+ LV + PR+A
Sbjct: 355 RHPDMFYVSFKGD---RDSVFLREAYKDSQLVEKNQLVLLKEKMRALVAVPRFPRRA--- 414
Query: 405 RELVGYRRERVGYDMESFRTDYVKDKCDDFGVENKGNVRDVLDSDIGSDVECDFSDDD 450
VG E G + D V D+ D E ++ D++ G + D+ D
Sbjct: 415 --AVGTGEEAEGMNGSLQSRDQVSDEEYDDEDEGLSDMEDLISELSGGKSDADYEWGD 451
BLAST of PI0003197 vs. ExPASy Swiss-Prot
Match:
A0MFS5 (Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At4g01037 PE=3 SV=1)
HSP 1 Score: 147.9 bits (372), Expect = 2.8e-34
Identity = 122/426 (28.64%), Postives = 219/426 (51.41%), Query Frame = 0
Query: 45 LQRVRDHGYDNYMEVEKKTRKVLKFQDLILSQYNQTIPVSRLDILARRLGFKQHEAG-AF 104
++R ++ +D+ ++ +KK + VL + +++SQ ++ + + L R LG K+ A
Sbjct: 76 VKRRKELTFDSVVQRDKKLKLVLNIRKILVSQPDRMMSLRGLGKYRRDLGLKKRRRFIAL 135
Query: 105 VLKFPHVFEIYEHPVQRILYCRLTRQAHLQIAQQKQAVIAQIPDA-VTRLRKLLMMSNNG 164
+ K+P VFEI E + + ++T +A ++ + + ++ D V +LRKL+MMS +
Sbjct: 136 LRKYPGVFEIVEEGAYSLRF-KMTSEAE-RLYLDEMRIRNELEDVLVVKLRKLVMMSIDK 195
Query: 165 RLRLEHIRIARSEFGLPDDFEYSVVLKHPQFFRLFDAKETRNKYIEIVERDPSLTVCAIE 224
R+ LE I +++ GLP +F ++ ++PQ+FR+ R +E+ DP L V A E
Sbjct: 196 RILLEKISHLKTDLGLPLEFRDTICQRYPQYFRV--VPTPRGPALELTHWDPELAVSAAE 255
Query: 225 ------RARERVYREKGSDAEDIRFSFIVNFPPGFKIGKYFRIAMWKWQRLPYWSPYEDI 284
R RE R D +F+ V P G + K + +++ + Y SPY+D
Sbjct: 256 LSEDDNRTRESEERNLIIDRPP-KFN-RVKLPRGLNLSKSETRKISQFRDMQYISPYKDF 315
Query: 285 SEYDMRSIEAQKRMEKRAVATIHEMLSLTVEKKITLERIAHFRLAMNLPKKLKDFLLQHQ 344
S ++E EK A IHE+LSLT EK+ ++ + HFR ++L+ L++H
Sbjct: 316 SHLRSGTLE----KEKHACGVIHELLSLTTEKRTLVDHLTHFREEFRFSQQLRGMLIRHP 375
Query: 345 GIFYISTRGNFGKLHTVFLREGYRRSELVEPNDVYLARRKLAELVLLS--PRKANLDREL 404
+FY+S + G+ +VFLRE YR SEL++ + + L + K+ LV + PR+ ++
Sbjct: 376 DLFYVSLK---GERDSVFLREAYRNSELIDKDPLTLVKEKMRALVSVPRFPRRGGPRKDE 435
Query: 405 VGYRRERVGYDMESFRTDYVKDKCDDFGVENKGNVRDVLD-SDIGSDVECDFSDDDNHSV 460
G E G D + +++ ++ E +V L+ D G+D + D++DD+
Sbjct: 436 EGREVEIDGSDADG------EEEEEESDAEEWSDVDGYLEGEDGGNDDDGDWTDDEGEED 482
BLAST of PI0003197 vs. ExPASy Swiss-Prot
Match:
Q9ZUZ6 (Protein WHAT'S THIS FACTOR 9, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=WTF9 PE=4 SV=1)
HSP 1 Score: 109.4 bits (272), Expect = 1.1e-22
Identity = 107/388 (27.58%), Postives = 175/388 (45.10%), Query Frame = 0
Query: 20 KTTAYFLFNFTRSRSMSQSTSIPKNLQRVRDHGYDNYMEV--EKKTRKVLKFQDLILSQY 79
KT A N T+ R T + ++ RD +DN + + + V+ ++ I+ +
Sbjct: 9 KTVASSCTNLTQKR-----TYVDVYMKWKRDPYFDNIEHILRSSQLKSVVSLKNCIVQEP 68
Query: 80 NQTIPVSRLDILARRLGFKQHEAGAFVLKFPHVFEIYEHPVQRILYCRLTRQAHLQIAQQ 139
N+ IP+S + R+ + F+ KFP +FE + P + + RLT +A Q+
Sbjct: 69 NRCIPISAISKKTRQFDVST-KIAHFLRKFPSIFEEFVGPEYNLPWFRLTPEATELDRQE 128
Query: 140 KQAVIAQIPDAVTRLRKLLMMSNNGRLRLEHIRIARSEFGLPDDFEYSVVLKHPQFFRLF 199
+ D RL+KL++MS + L L ++ + GLPDD+ + FR
Sbjct: 129 RVVYQTSADDLRDRLKKLILMSKDNVLPLSIVQGMKWYLGLPDDYLQFPDMNLDSSFRFV 188
Query: 200 DAKE-TRNKYIEIVERDPSLTVCAIERARERVYREKGS-DAEDIRFSFIVNFP-PGFKIG 259
D ++ + ++ D L+V ++R +G E+I F FP G ++
Sbjct: 189 DMEDGVKGLAVDYNGGDKVLSVLQKNAMKKR----RGEVSLEEIEFPL---FPSKGCRLR 248
Query: 260 KYFRIAMWKWQRLPYWSPYEDISEYDMRSIEAQKRMEKRAVATIHEMLSLTVEKKITLER 319
+ ++Q+LPY SPY+D S D S A EKR V +HE+L L VE ++
Sbjct: 249 VKIEDWLMEFQKLPYVSPYDDYSCLDPSSDIA----EKRVVGFLHELLCLFVEHSAERKK 308
Query: 320 IAHFRLAMNLPKKLKDFLLQHQGIFYISTRGNFGKLHTVFLREGYRRSELVEPNDVYLAR 379
+ + LP+K+ +H IFY+S + K T LRE YR VE + V R
Sbjct: 309 LLCLKKHFGLPQKVHKAFERHPQIFYLSMK---NKTCTAILREPYRDKASVETHPVLGVR 368
Query: 380 RKLAELVLLSPRKANLDRELVGYRRERV 403
+K +L+ S R G+R E V
Sbjct: 369 KKYIQLMKNSELILKSRRNSFGFRDEGV 376
BLAST of PI0003197 vs. ExPASy TrEMBL
Match:
A0A1S4DS47 (protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo OX=3656 GN=LOC103504628 PE=4 SV=1)
HSP 1 Score: 874.0 bits (2257), Expect = 2.8e-250
Identity = 443/462 (95.89%), Postives = 451/462 (97.62%), Query Frame = 0
Query: 1 MLIFFGYHPKFLTSNFTSFKTTAYFLFNFTRSRSMSQSTSIPKNLQRVRDHGYDNYMEVE 60
MLIFFGYHPKFLTSNFTSFKT AYFLFNFTRSRSMSQSTSIPKNLQRVRDHGYDNYMEVE
Sbjct: 1 MLIFFGYHPKFLTSNFTSFKTRAYFLFNFTRSRSMSQSTSIPKNLQRVRDHGYDNYMEVE 60
Query: 61 KKTRKVLKFQDLILSQYNQTIPVSRLDILARRLGFKQHEAGAFVLKFPHVFEIYEHPVQR 120
KK RKVLKFQDLILSQ+NQTIPVSRLDILARRLGFKQHEAGAFVLKFPHVFEIYEHPVQR
Sbjct: 61 KKIRKVLKFQDLILSQFNQTIPVSRLDILARRLGFKQHEAGAFVLKFPHVFEIYEHPVQR 120
Query: 121 ILYCRLTRQAHLQIAQQKQAVIAQIPDAVTRLRKLLMMSNNGRLRLEHIRIARSEFGLPD 180
ILYCRLTR+AHLQI QQK+AVIAQIPDAVTRLRKLLMMSN GRLRLEHIRIARSEFGLPD
Sbjct: 121 ILYCRLTRKAHLQIEQQKRAVIAQIPDAVTRLRKLLMMSNKGRLRLEHIRIARSEFGLPD 180
Query: 181 DFEYSVVLKHPQFFRLFDAKETRNKYIEIVERDPSLTVCAIERARERVYREKGSDAEDIR 240
DFEYSVVLKHPQFFRLFDAKETRNKYIEIVERDPSLTVCAIERARERVYRE+GSDAEDIR
Sbjct: 181 DFEYSVVLKHPQFFRLFDAKETRNKYIEIVERDPSLTVCAIERARERVYREQGSDAEDIR 240
Query: 241 FSFIVNFPPGFKIGKYFRIAMWKWQRLPYWSPYEDISEYDMRSIEAQKRMEKRAVATIHE 300
FSFIVNFPPGFKIGKYFRIAMWKWQRLPYWSPYEDISEYDMRSIEAQKRMEKRAVATIHE
Sbjct: 241 FSFIVNFPPGFKIGKYFRIAMWKWQRLPYWSPYEDISEYDMRSIEAQKRMEKRAVATIHE 300
Query: 301 MLSLTVEKKITLERIAHFRLAMNLPKKLKDFLLQHQGIFYISTRGNFGKLHTVFLREGYR 360
MLSLTVEKK+TLERIAHFRLAMNLPKKLKDFLLQHQGIFYISTRGN GKLHTVFLREGYR
Sbjct: 301 MLSLTVEKKLTLERIAHFRLAMNLPKKLKDFLLQHQGIFYISTRGNHGKLHTVFLREGYR 360
Query: 361 RSELVEPNDVYLARRKLAELVLLSPRKANLDRELVGYRRERVGYDMESFRTDYVKDKCDD 420
R ELVEPNDVYLARR LAELVLLSPRKA LDRELVGYRRERVGYDME+ RTDYV+DK DD
Sbjct: 361 RGELVEPNDVYLARRHLAELVLLSPRKAKLDRELVGYRRERVGYDMENCRTDYVEDKSDD 420
Query: 421 FGVENKGNVRDVLDSDIGSDVECDFSDDDNHSVEVENVDITE 463
FGVENKGNVRDVLDSDIGSDVE DFSDDDNHSVEVE+VDITE
Sbjct: 421 FGVENKGNVRDVLDSDIGSDVESDFSDDDNHSVEVEDVDITE 462
BLAST of PI0003197 vs. ExPASy TrEMBL
Match:
A0A5D3BLZ6 (Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1728G00370 PE=4 SV=1)
HSP 1 Score: 811.2 bits (2094), Expect = 2.2e-231
Identity = 410/428 (95.79%), Postives = 418/428 (97.66%), Query Frame = 0
Query: 35 MSQSTSIPKNLQRVRDHGYDNYMEVEKKTRKVLKFQDLILSQYNQTIPVSRLDILARRLG 94
MSQSTSIPKNLQRVRDHGYDNYMEVEKK RKVLKFQDLILSQ+NQTIPVSRLDILARRLG
Sbjct: 1 MSQSTSIPKNLQRVRDHGYDNYMEVEKKIRKVLKFQDLILSQFNQTIPVSRLDILARRLG 60
Query: 95 FKQHEAGAFVLKFPHVFEIYEHPVQRILYCRLTRQAHLQIAQQKQAVIAQIPDAVTRLRK 154
FKQHEAGAFVLKFPHVFEIYEHPVQRILYCRLTR+AHLQI QQK+AVIAQIPDAVTRLRK
Sbjct: 61 FKQHEAGAFVLKFPHVFEIYEHPVQRILYCRLTRKAHLQIEQQKRAVIAQIPDAVTRLRK 120
Query: 155 LLMMSNNGRLRLEHIRIARSEFGLPDDFEYSVVLKHPQFFRLFDAKETRNKYIEIVERDP 214
LLMMSN GRLRLEHIRIARSEFGLPDDFEYSVVLKHPQFFRLFDAKETRNKYIEIVERDP
Sbjct: 121 LLMMSNKGRLRLEHIRIARSEFGLPDDFEYSVVLKHPQFFRLFDAKETRNKYIEIVERDP 180
Query: 215 SLTVCAIERARERVYREKGSDAEDIRFSFIVNFPPGFKIGKYFRIAMWKWQRLPYWSPYE 274
SLTVCAIERARERVYRE+GSDAEDIRFSFIVNFPPGFKIGKYFRIAMWKWQRLPYWSPYE
Sbjct: 181 SLTVCAIERARERVYREQGSDAEDIRFSFIVNFPPGFKIGKYFRIAMWKWQRLPYWSPYE 240
Query: 275 DISEYDMRSIEAQKRMEKRAVATIHEMLSLTVEKKITLERIAHFRLAMNLPKKLKDFLLQ 334
DISEYDMRSIEAQKRMEKRAVATIHEMLSLTVEKK+TLERIAHFRLAMNLPKKLKDFLLQ
Sbjct: 241 DISEYDMRSIEAQKRMEKRAVATIHEMLSLTVEKKLTLERIAHFRLAMNLPKKLKDFLLQ 300
Query: 335 HQGIFYISTRGNFGKLHTVFLREGYRRSELVEPNDVYLARRKLAELVLLSPRKANLDREL 394
HQGIFYISTRGN GKLHTVFLREGYRR ELVEPNDVYLARR LAELVLLSPRKA LDREL
Sbjct: 301 HQGIFYISTRGNHGKLHTVFLREGYRRGELVEPNDVYLARRHLAELVLLSPRKAKLDREL 360
Query: 395 VGYRRERVGYDMESFRTDYVKDKCDDFGVENKGNVRDVLDSDIGSDVECDFSDDDNHSVE 454
VGYRRERVGYDME+ RTDYV+DK DDFGVENKGNVRDVLDSDIGSDVE DFSDDDNHSVE
Sbjct: 361 VGYRRERVGYDMENCRTDYVEDKSDDFGVENKGNVRDVLDSDIGSDVESDFSDDDNHSVE 420
Query: 455 VENVDITE 463
VE+VDITE
Sbjct: 421 VEDVDITE 428
BLAST of PI0003197 vs. ExPASy TrEMBL
Match:
A0A0A0KLD1 (PORR domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G173460 PE=4 SV=1)
HSP 1 Score: 810.8 bits (2093), Expect = 2.9e-231
Identity = 410/428 (95.79%), Postives = 420/428 (98.13%), Query Frame = 0
Query: 35 MSQSTSIPKNLQRVRDHGYDNYMEVEKKTRKVLKFQDLILSQYNQTIPVSRLDILARRLG 94
MSQSTSIPKNLQRVRDHGYDNYMEVEKKTRKVLKFQ+LILSQ+NQTIPVSRLDILARRLG
Sbjct: 1 MSQSTSIPKNLQRVRDHGYDNYMEVEKKTRKVLKFQELILSQFNQTIPVSRLDILARRLG 60
Query: 95 FKQHEAGAFVLKFPHVFEIYEHPVQRILYCRLTRQAHLQIAQQKQAVIAQIPDAVTRLRK 154
FKQHEAGAFVLKFPHVFEIYEHPVQRILYCRLTR+AHLQI QQK+AVIAQIPDAVTRLRK
Sbjct: 61 FKQHEAGAFVLKFPHVFEIYEHPVQRILYCRLTRKAHLQIEQQKRAVIAQIPDAVTRLRK 120
Query: 155 LLMMSNNGRLRLEHIRIARSEFGLPDDFEYSVVLKHPQFFRLFDAKETRNKYIEIVERDP 214
LLMMSNNGRLRLEHIRIARSEFGLPDDFEYSVVLKHPQFFRLFDAKETRNKYIEIVERDP
Sbjct: 121 LLMMSNNGRLRLEHIRIARSEFGLPDDFEYSVVLKHPQFFRLFDAKETRNKYIEIVERDP 180
Query: 215 SLTVCAIERARERVYREKGSDAEDIRFSFIVNFPPGFKIGKYFRIAMWKWQRLPYWSPYE 274
SLTVCAIERARERVYREKGSDAEDIRFSF+VNFPPGFKIGKYFRIAMWKWQRLPYWSPYE
Sbjct: 181 SLTVCAIERARERVYREKGSDAEDIRFSFVVNFPPGFKIGKYFRIAMWKWQRLPYWSPYE 240
Query: 275 DISEYDMRSIEAQKRMEKRAVATIHEMLSLTVEKKITLERIAHFRLAMNLPKKLKDFLLQ 334
DISEYDMRSIEAQKRMEKRAVATIHEMLSLTVEKKITLERIAHFRLAM LPKKLKDFLLQ
Sbjct: 241 DISEYDMRSIEAQKRMEKRAVATIHEMLSLTVEKKITLERIAHFRLAMYLPKKLKDFLLQ 300
Query: 335 HQGIFYISTRGNFGKLHTVFLREGYRRSELVEPNDVYLARRKLAELVLLSPRKANLDREL 394
HQGIFYISTRGN GKLHTVFLREGYRRSELVEPNDVYLARR+LAELVLLSPRKA +DREL
Sbjct: 301 HQGIFYISTRGNHGKLHTVFLREGYRRSELVEPNDVYLARRQLAELVLLSPRKATVDREL 360
Query: 395 VGYRRERVGYDMESFRTDYVKDKCDDFGVENKGNVRDVLDSDIGSDVECDFSDDDNHSVE 454
VGYRRERVGYDME+ RTDYV+DK DFGVENKGNVRDVLDSDIGSDVE DFSDDDNHSVE
Sbjct: 361 VGYRRERVGYDMENSRTDYVEDKSVDFGVENKGNVRDVLDSDIGSDVESDFSDDDNHSVE 420
Query: 455 VENVDITE 463
VE+VDITE
Sbjct: 421 VEDVDITE 428
BLAST of PI0003197 vs. ExPASy TrEMBL
Match:
A0A5A7UNY2 (Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold231G001020 PE=4 SV=1)
HSP 1 Score: 798.1 bits (2060), Expect = 1.9e-227
Identity = 402/420 (95.71%), Postives = 410/420 (97.62%), Query Frame = 0
Query: 35 MSQSTSIPKNLQRVRDHGYDNYMEVEKKTRKVLKFQDLILSQYNQTIPVSRLDILARRLG 94
MSQSTSIPKNLQRVRDHGYDNYMEVEKK RKVLKFQDLILSQ+NQTIPVSRLDILARRLG
Sbjct: 1 MSQSTSIPKNLQRVRDHGYDNYMEVEKKIRKVLKFQDLILSQFNQTIPVSRLDILARRLG 60
Query: 95 FKQHEAGAFVLKFPHVFEIYEHPVQRILYCRLTRQAHLQIAQQKQAVIAQIPDAVTRLRK 154
FKQHEAGAFVLKFPHVFEIYEHPVQRILYCRLTR+AHLQI QQK+AVIAQIPDAVTRLRK
Sbjct: 61 FKQHEAGAFVLKFPHVFEIYEHPVQRILYCRLTRKAHLQIEQQKRAVIAQIPDAVTRLRK 120
Query: 155 LLMMSNNGRLRLEHIRIARSEFGLPDDFEYSVVLKHPQFFRLFDAKETRNKYIEIVERDP 214
LLMMSN GRLRLEHIRIARSEFGLPDDFEYSVVLKHPQFFRLFDAKETRNKYIEIVERDP
Sbjct: 121 LLMMSNKGRLRLEHIRIARSEFGLPDDFEYSVVLKHPQFFRLFDAKETRNKYIEIVERDP 180
Query: 215 SLTVCAIERARERVYREKGSDAEDIRFSFIVNFPPGFKIGKYFRIAMWKWQRLPYWSPYE 274
SLTVCAIERARERVYRE+GSDAEDIRFSFIVNFPPGFKIGKYFRIAMWKWQRLPYWSPYE
Sbjct: 181 SLTVCAIERARERVYREQGSDAEDIRFSFIVNFPPGFKIGKYFRIAMWKWQRLPYWSPYE 240
Query: 275 DISEYDMRSIEAQKRMEKRAVATIHEMLSLTVEKKITLERIAHFRLAMNLPKKLKDFLLQ 334
DISEYDMRSIEAQKRMEKRAVATIHEMLSLTVEKK+TLERIAHFRLAMNLPKKLKDFLLQ
Sbjct: 241 DISEYDMRSIEAQKRMEKRAVATIHEMLSLTVEKKLTLERIAHFRLAMNLPKKLKDFLLQ 300
Query: 335 HQGIFYISTRGNFGKLHTVFLREGYRRSELVEPNDVYLARRKLAELVLLSPRKANLDREL 394
HQGIFYISTRGN GKLHTVFLREGYRR +LVEPNDVYLARR LAELVLLSPRKA LDREL
Sbjct: 301 HQGIFYISTRGNHGKLHTVFLREGYRRGDLVEPNDVYLARRHLAELVLLSPRKAKLDREL 360
Query: 395 VGYRRERVGYDMESFRTDYVKDKCDDFGVENKGNVRDVLDSDIGSDVECDFSDDDNHSVE 454
VGYRRERVGYDME+ RTDYV+DK DDFGVENKGNVRDVLDSDIGSDVE DFSDDDNHSVE
Sbjct: 361 VGYRRERVGYDMENCRTDYVEDKSDDFGVENKGNVRDVLDSDIGSDVESDFSDDDNHSVE 420
BLAST of PI0003197 vs. ExPASy TrEMBL
Match:
A0A6J1EMT6 (protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucurbita moschata OX=3662 GN=LOC111435790 PE=4 SV=1)
HSP 1 Score: 790.4 bits (2040), Expect = 4.0e-225
Identity = 402/466 (86.27%), Postives = 433/466 (92.92%), Query Frame = 0
Query: 1 MLIFFGYHPKFLTSNFTSFKTTAYFLFNFTRSRSMSQSTSIPKNLQRVRDHGYDNYMEVE 60
M+IF+GY KF ++ FT+FKTTAY L NF+RSRSMSQSTSIP+ L+RVRDHGYDNYM+VE
Sbjct: 1 MMIFYGYCSKFRSTKFTAFKTTAYVLCNFSRSRSMSQSTSIPRKLERVRDHGYDNYMDVE 60
Query: 61 KKTRKVLKFQDLILSQYNQTIPVSRLDILARRLGFKQHEAGAFVLKFPHVFEIYEHPVQR 120
KKTRKVLKFQDLIL+Q NQTIPVSRLD+ ARRLGFKQHEAGAFVLKFPHVFEIYEHPVQR
Sbjct: 61 KKTRKVLKFQDLILTQINQTIPVSRLDVSARRLGFKQHEAGAFVLKFPHVFEIYEHPVQR 120
Query: 121 ILYCRLTRQAHLQIAQQKQAVIAQIPDAVTRLRKLLMMSNNGRLRLEHIRIARSEFGLPD 180
ILYCRLTR+AHLQI Q+KQAVIAQIPDAVTRLRKLLMMSNNGRLRLEHIRIARSEFGLPD
Sbjct: 121 ILYCRLTRKAHLQIEQEKQAVIAQIPDAVTRLRKLLMMSNNGRLRLEHIRIARSEFGLPD 180
Query: 181 DFEYSVVLKHPQFFRLFDAKETRNKYIEIVERDPSLTVCAIERARERVYREKGSDAEDIR 240
DFEYSVVLK+PQFFRLFDAKETRNKYIEIVERDP+LTVCAIE+ARERVYREKGSDAEDIR
Sbjct: 181 DFEYSVVLKYPQFFRLFDAKETRNKYIEIVERDPNLTVCAIEKARERVYREKGSDAEDIR 240
Query: 241 FSFIVNFPPGFKIGKYFRIAMWKWQRLPYWSPYEDISEYDMRSIEAQKRMEKRAVATIHE 300
FSFIVNFPPGFKIGKY+RIA+WKWQRLPYWSPYED+SEYDMRSIEAQKRMEKRAVATIHE
Sbjct: 241 FSFIVNFPPGFKIGKYYRIAVWKWQRLPYWSPYEDVSEYDMRSIEAQKRMEKRAVATIHE 300
Query: 301 MLSLTVEKKITLERIAHFRLAMNLPKKLKDFLLQHQGIFYISTRGNFGKLHTVFLREGYR 360
ML LTVEKKI+LERIAHFRLAM+LPKKLKDFLLQHQGIFYISTRGN GKLHT+FLRE YR
Sbjct: 301 MLCLTVEKKISLERIAHFRLAMDLPKKLKDFLLQHQGIFYISTRGNHGKLHTIFLREAYR 360
Query: 361 RSELVEPNDVYLARRKLAELVLLSPRKANLDRELVGYRRERVGYDMESFRTDYVKDKCDD 420
R EL+EPNDVYLARR LAELVLLSPRKA L+RELVGYRRERVGYDMESFR DK DD
Sbjct: 361 RGELIEPNDVYLARRTLAELVLLSPRKAKLNRELVGYRRERVGYDMESFR----PDKLDD 420
Query: 421 FGVENKGNVRDVLDSDIGSDVECDFSDDDNHSV----EVENVDITE 463
+G ++GNVRDVLDSD+GSD E DFSDD N SV E E+V+IT+
Sbjct: 421 YGAGDRGNVRDVLDSDVGSDSESDFSDDSNRSVDETFEEEDVNITK 462
BLAST of PI0003197 vs. NCBI nr
Match:
XP_016898810.1 (PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo] >XP_016898811.1 PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo] >XP_016898812.1 PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo] >XP_016898813.1 PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo])
HSP 1 Score: 874.0 bits (2257), Expect = 5.7e-250
Identity = 443/462 (95.89%), Postives = 451/462 (97.62%), Query Frame = 0
Query: 1 MLIFFGYHPKFLTSNFTSFKTTAYFLFNFTRSRSMSQSTSIPKNLQRVRDHGYDNYMEVE 60
MLIFFGYHPKFLTSNFTSFKT AYFLFNFTRSRSMSQSTSIPKNLQRVRDHGYDNYMEVE
Sbjct: 1 MLIFFGYHPKFLTSNFTSFKTRAYFLFNFTRSRSMSQSTSIPKNLQRVRDHGYDNYMEVE 60
Query: 61 KKTRKVLKFQDLILSQYNQTIPVSRLDILARRLGFKQHEAGAFVLKFPHVFEIYEHPVQR 120
KK RKVLKFQDLILSQ+NQTIPVSRLDILARRLGFKQHEAGAFVLKFPHVFEIYEHPVQR
Sbjct: 61 KKIRKVLKFQDLILSQFNQTIPVSRLDILARRLGFKQHEAGAFVLKFPHVFEIYEHPVQR 120
Query: 121 ILYCRLTRQAHLQIAQQKQAVIAQIPDAVTRLRKLLMMSNNGRLRLEHIRIARSEFGLPD 180
ILYCRLTR+AHLQI QQK+AVIAQIPDAVTRLRKLLMMSN GRLRLEHIRIARSEFGLPD
Sbjct: 121 ILYCRLTRKAHLQIEQQKRAVIAQIPDAVTRLRKLLMMSNKGRLRLEHIRIARSEFGLPD 180
Query: 181 DFEYSVVLKHPQFFRLFDAKETRNKYIEIVERDPSLTVCAIERARERVYREKGSDAEDIR 240
DFEYSVVLKHPQFFRLFDAKETRNKYIEIVERDPSLTVCAIERARERVYRE+GSDAEDIR
Sbjct: 181 DFEYSVVLKHPQFFRLFDAKETRNKYIEIVERDPSLTVCAIERARERVYREQGSDAEDIR 240
Query: 241 FSFIVNFPPGFKIGKYFRIAMWKWQRLPYWSPYEDISEYDMRSIEAQKRMEKRAVATIHE 300
FSFIVNFPPGFKIGKYFRIAMWKWQRLPYWSPYEDISEYDMRSIEAQKRMEKRAVATIHE
Sbjct: 241 FSFIVNFPPGFKIGKYFRIAMWKWQRLPYWSPYEDISEYDMRSIEAQKRMEKRAVATIHE 300
Query: 301 MLSLTVEKKITLERIAHFRLAMNLPKKLKDFLLQHQGIFYISTRGNFGKLHTVFLREGYR 360
MLSLTVEKK+TLERIAHFRLAMNLPKKLKDFLLQHQGIFYISTRGN GKLHTVFLREGYR
Sbjct: 301 MLSLTVEKKLTLERIAHFRLAMNLPKKLKDFLLQHQGIFYISTRGNHGKLHTVFLREGYR 360
Query: 361 RSELVEPNDVYLARRKLAELVLLSPRKANLDRELVGYRRERVGYDMESFRTDYVKDKCDD 420
R ELVEPNDVYLARR LAELVLLSPRKA LDRELVGYRRERVGYDME+ RTDYV+DK DD
Sbjct: 361 RGELVEPNDVYLARRHLAELVLLSPRKAKLDRELVGYRRERVGYDMENCRTDYVEDKSDD 420
Query: 421 FGVENKGNVRDVLDSDIGSDVECDFSDDDNHSVEVENVDITE 463
FGVENKGNVRDVLDSDIGSDVE DFSDDDNHSVEVE+VDITE
Sbjct: 421 FGVENKGNVRDVLDSDIGSDVESDFSDDDNHSVEVEDVDITE 462
BLAST of PI0003197 vs. NCBI nr
Match:
XP_004143708.2 (protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis sativus] >KAE8647948.1 hypothetical protein Csa_000134 [Cucumis sativus])
HSP 1 Score: 864.0 bits (2231), Expect = 5.9e-247
Identity = 439/462 (95.02%), Postives = 450/462 (97.40%), Query Frame = 0
Query: 1 MLIFFGYHPKFLTSNFTSFKTTAYFLFNFTRSRSMSQSTSIPKNLQRVRDHGYDNYMEVE 60
MLIFFGYHPK LTSNFTSFKT A+FLFN T SRSMSQSTSIPKNLQRVRDHGYDNYMEVE
Sbjct: 1 MLIFFGYHPKSLTSNFTSFKTRAFFLFNLTLSRSMSQSTSIPKNLQRVRDHGYDNYMEVE 60
Query: 61 KKTRKVLKFQDLILSQYNQTIPVSRLDILARRLGFKQHEAGAFVLKFPHVFEIYEHPVQR 120
KKTRKVLKFQ+LILSQ+NQTIPVSRLDILARRLGFKQHEAGAFVLKFPHVFEIYEHPVQR
Sbjct: 61 KKTRKVLKFQELILSQFNQTIPVSRLDILARRLGFKQHEAGAFVLKFPHVFEIYEHPVQR 120
Query: 121 ILYCRLTRQAHLQIAQQKQAVIAQIPDAVTRLRKLLMMSNNGRLRLEHIRIARSEFGLPD 180
ILYCRLTR+AHLQI QQK+AVIAQIPDAVTRLRKLLMMSNNGRLRLEHIRIARSEFGLPD
Sbjct: 121 ILYCRLTRKAHLQIEQQKRAVIAQIPDAVTRLRKLLMMSNNGRLRLEHIRIARSEFGLPD 180
Query: 181 DFEYSVVLKHPQFFRLFDAKETRNKYIEIVERDPSLTVCAIERARERVYREKGSDAEDIR 240
DFEYSVVLKHPQFFRLFDAKETRNKYIEIVERDPSLTVCAIERARERVYREKGSDAEDIR
Sbjct: 181 DFEYSVVLKHPQFFRLFDAKETRNKYIEIVERDPSLTVCAIERARERVYREKGSDAEDIR 240
Query: 241 FSFIVNFPPGFKIGKYFRIAMWKWQRLPYWSPYEDISEYDMRSIEAQKRMEKRAVATIHE 300
FSF+VNFPPGFKIGKYFRIAMWKWQRLPYWSPYEDISEYDMRSIEAQKRMEKRAVATIHE
Sbjct: 241 FSFVVNFPPGFKIGKYFRIAMWKWQRLPYWSPYEDISEYDMRSIEAQKRMEKRAVATIHE 300
Query: 301 MLSLTVEKKITLERIAHFRLAMNLPKKLKDFLLQHQGIFYISTRGNFGKLHTVFLREGYR 360
MLSLTVEKKITLERIAHFRLAM LPKKLKDFLLQHQGIFYISTRGN GKLHTVFLREGYR
Sbjct: 301 MLSLTVEKKITLERIAHFRLAMYLPKKLKDFLLQHQGIFYISTRGNHGKLHTVFLREGYR 360
Query: 361 RSELVEPNDVYLARRKLAELVLLSPRKANLDRELVGYRRERVGYDMESFRTDYVKDKCDD 420
RSELVEPNDVYLARR+LAELVLLSPRKA +DRELVGYRRERVGYDME+ RTDYV+DK D
Sbjct: 361 RSELVEPNDVYLARRQLAELVLLSPRKATVDRELVGYRRERVGYDMENSRTDYVEDKSVD 420
Query: 421 FGVENKGNVRDVLDSDIGSDVECDFSDDDNHSVEVENVDITE 463
FGVENKGNVRDVLDSDIGSDVE DFSDDDNHSVEVE+VDITE
Sbjct: 421 FGVENKGNVRDVLDSDIGSDVESDFSDDDNHSVEVEDVDITE 462
BLAST of PI0003197 vs. NCBI nr
Match:
XP_038876292.1 (protein ROOT PRIMORDIUM DEFECTIVE 1 [Benincasa hispida] >XP_038876293.1 protein ROOT PRIMORDIUM DEFECTIVE 1 [Benincasa hispida])
HSP 1 Score: 827.0 bits (2135), Expect = 8.0e-236
Identity = 421/465 (90.54%), Postives = 441/465 (94.84%), Query Frame = 0
Query: 2 LIFFGYHPKFLTSNFTSFKTTAYFLFNFTRSRSMSQSTSIPKNLQRVRDHGYDNYMEVEK 61
+IFFG+H KFLTS F +F+TTAYFL NF+RSRSM+QSTSIPK LQRVRDHGYDNYMEVEK
Sbjct: 1 MIFFGHHRKFLTSKFIAFETTAYFLCNFSRSRSMTQSTSIPKKLQRVRDHGYDNYMEVEK 60
Query: 62 KTRKVLKFQDLILSQYNQTIPVSRLDILARRLGFKQHEAGAFVLKFPHVFEIYEHPVQRI 121
KTRKVLKFQDLIL+Q NQTIPVSRLDILARRLGFKQHEAGAFVLKFPHVFEIYEHPVQRI
Sbjct: 61 KTRKVLKFQDLILTQINQTIPVSRLDILARRLGFKQHEAGAFVLKFPHVFEIYEHPVQRI 120
Query: 122 LYCRLTRQAHLQIAQQKQAVIAQIPDAVTRLRKLLMMSNNGRLRLEHIRIARSEFGLPDD 181
LYCRLTR+AHLQI QQKQAVIAQIPDAVTRLRKLLMMSNNGRLRLEHIRIARSEFGLPDD
Sbjct: 121 LYCRLTRKAHLQIEQQKQAVIAQIPDAVTRLRKLLMMSNNGRLRLEHIRIARSEFGLPDD 180
Query: 182 FEYSVVLKHPQFFRLFDAKETRNKYIEIVERDPSLTVCAIERARERVYREKGSDAEDIRF 241
FEYSVVLK+PQFFRLFDAKETRNKYIEIVERDP+L VCAIERARERVYREKGSDAEDIRF
Sbjct: 181 FEYSVVLKYPQFFRLFDAKETRNKYIEIVERDPNLAVCAIERARERVYREKGSDAEDIRF 240
Query: 242 SFIVNFPPGFKIGKYFRIAMWKWQRLPYWSPYEDISEYDMRSIEAQKRMEKRAVATIHEM 301
SFIVNFPPGFKIGKYFRIAMWKWQRLPYWSPYED+S+YDMRSIEA KRMEKRAVATIHEM
Sbjct: 241 SFIVNFPPGFKIGKYFRIAMWKWQRLPYWSPYEDVSKYDMRSIEALKRMEKRAVATIHEM 300
Query: 302 LSLTVEKKITLERIAHFRLAMNLPKKLKDFLLQHQGIFYISTRGNFGKLHTVFLREGYRR 361
LSLTVEKKITLERIAHFRLAMNLP KLKDFLLQHQGIFYISTRGN GKLHTVFLREGYRR
Sbjct: 301 LSLTVEKKITLERIAHFRLAMNLPNKLKDFLLQHQGIFYISTRGNHGKLHTVFLREGYRR 360
Query: 362 SELVEPNDVYLARRKLAELVLLSPRKANLDRELVGYRRERVGYDMESFRTDYVKDKCDDF 421
EL+EPNDVYLARRKLAELVLLSPRKA LD+ELVGYRRERVGYDMESFRTDYV+DK DDF
Sbjct: 361 GELIEPNDVYLARRKLAELVLLSPRKAKLDKELVGYRRERVGYDMESFRTDYVEDKFDDF 420
Query: 422 GVENKGNVRDVLDSDIGSDVECDFSDDDNHSVE----VENVDITE 463
V NKGNVRDVLDSD+ SDVE +FSDDDNHSV+ E+V+ TE
Sbjct: 421 AVGNKGNVRDVLDSDLDSDVEPNFSDDDNHSVDKTFKAEDVNETE 465
BLAST of PI0003197 vs. NCBI nr
Match:
TYK00294.1 (protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo var. makuwa])
HSP 1 Score: 811.2 bits (2094), Expect = 4.5e-231
Identity = 410/428 (95.79%), Postives = 418/428 (97.66%), Query Frame = 0
Query: 35 MSQSTSIPKNLQRVRDHGYDNYMEVEKKTRKVLKFQDLILSQYNQTIPVSRLDILARRLG 94
MSQSTSIPKNLQRVRDHGYDNYMEVEKK RKVLKFQDLILSQ+NQTIPVSRLDILARRLG
Sbjct: 1 MSQSTSIPKNLQRVRDHGYDNYMEVEKKIRKVLKFQDLILSQFNQTIPVSRLDILARRLG 60
Query: 95 FKQHEAGAFVLKFPHVFEIYEHPVQRILYCRLTRQAHLQIAQQKQAVIAQIPDAVTRLRK 154
FKQHEAGAFVLKFPHVFEIYEHPVQRILYCRLTR+AHLQI QQK+AVIAQIPDAVTRLRK
Sbjct: 61 FKQHEAGAFVLKFPHVFEIYEHPVQRILYCRLTRKAHLQIEQQKRAVIAQIPDAVTRLRK 120
Query: 155 LLMMSNNGRLRLEHIRIARSEFGLPDDFEYSVVLKHPQFFRLFDAKETRNKYIEIVERDP 214
LLMMSN GRLRLEHIRIARSEFGLPDDFEYSVVLKHPQFFRLFDAKETRNKYIEIVERDP
Sbjct: 121 LLMMSNKGRLRLEHIRIARSEFGLPDDFEYSVVLKHPQFFRLFDAKETRNKYIEIVERDP 180
Query: 215 SLTVCAIERARERVYREKGSDAEDIRFSFIVNFPPGFKIGKYFRIAMWKWQRLPYWSPYE 274
SLTVCAIERARERVYRE+GSDAEDIRFSFIVNFPPGFKIGKYFRIAMWKWQRLPYWSPYE
Sbjct: 181 SLTVCAIERARERVYREQGSDAEDIRFSFIVNFPPGFKIGKYFRIAMWKWQRLPYWSPYE 240
Query: 275 DISEYDMRSIEAQKRMEKRAVATIHEMLSLTVEKKITLERIAHFRLAMNLPKKLKDFLLQ 334
DISEYDMRSIEAQKRMEKRAVATIHEMLSLTVEKK+TLERIAHFRLAMNLPKKLKDFLLQ
Sbjct: 241 DISEYDMRSIEAQKRMEKRAVATIHEMLSLTVEKKLTLERIAHFRLAMNLPKKLKDFLLQ 300
Query: 335 HQGIFYISTRGNFGKLHTVFLREGYRRSELVEPNDVYLARRKLAELVLLSPRKANLDREL 394
HQGIFYISTRGN GKLHTVFLREGYRR ELVEPNDVYLARR LAELVLLSPRKA LDREL
Sbjct: 301 HQGIFYISTRGNHGKLHTVFLREGYRRGELVEPNDVYLARRHLAELVLLSPRKAKLDREL 360
Query: 395 VGYRRERVGYDMESFRTDYVKDKCDDFGVENKGNVRDVLDSDIGSDVECDFSDDDNHSVE 454
VGYRRERVGYDME+ RTDYV+DK DDFGVENKGNVRDVLDSDIGSDVE DFSDDDNHSVE
Sbjct: 361 VGYRRERVGYDMENCRTDYVEDKSDDFGVENKGNVRDVLDSDIGSDVESDFSDDDNHSVE 420
Query: 455 VENVDITE 463
VE+VDITE
Sbjct: 421 VEDVDITE 428
BLAST of PI0003197 vs. NCBI nr
Match:
KAA0055169.1 (protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo var. makuwa])
HSP 1 Score: 798.1 bits (2060), Expect = 4.0e-227
Identity = 402/420 (95.71%), Postives = 410/420 (97.62%), Query Frame = 0
Query: 35 MSQSTSIPKNLQRVRDHGYDNYMEVEKKTRKVLKFQDLILSQYNQTIPVSRLDILARRLG 94
MSQSTSIPKNLQRVRDHGYDNYMEVEKK RKVLKFQDLILSQ+NQTIPVSRLDILARRLG
Sbjct: 1 MSQSTSIPKNLQRVRDHGYDNYMEVEKKIRKVLKFQDLILSQFNQTIPVSRLDILARRLG 60
Query: 95 FKQHEAGAFVLKFPHVFEIYEHPVQRILYCRLTRQAHLQIAQQKQAVIAQIPDAVTRLRK 154
FKQHEAGAFVLKFPHVFEIYEHPVQRILYCRLTR+AHLQI QQK+AVIAQIPDAVTRLRK
Sbjct: 61 FKQHEAGAFVLKFPHVFEIYEHPVQRILYCRLTRKAHLQIEQQKRAVIAQIPDAVTRLRK 120
Query: 155 LLMMSNNGRLRLEHIRIARSEFGLPDDFEYSVVLKHPQFFRLFDAKETRNKYIEIVERDP 214
LLMMSN GRLRLEHIRIARSEFGLPDDFEYSVVLKHPQFFRLFDAKETRNKYIEIVERDP
Sbjct: 121 LLMMSNKGRLRLEHIRIARSEFGLPDDFEYSVVLKHPQFFRLFDAKETRNKYIEIVERDP 180
Query: 215 SLTVCAIERARERVYREKGSDAEDIRFSFIVNFPPGFKIGKYFRIAMWKWQRLPYWSPYE 274
SLTVCAIERARERVYRE+GSDAEDIRFSFIVNFPPGFKIGKYFRIAMWKWQRLPYWSPYE
Sbjct: 181 SLTVCAIERARERVYREQGSDAEDIRFSFIVNFPPGFKIGKYFRIAMWKWQRLPYWSPYE 240
Query: 275 DISEYDMRSIEAQKRMEKRAVATIHEMLSLTVEKKITLERIAHFRLAMNLPKKLKDFLLQ 334
DISEYDMRSIEAQKRMEKRAVATIHEMLSLTVEKK+TLERIAHFRLAMNLPKKLKDFLLQ
Sbjct: 241 DISEYDMRSIEAQKRMEKRAVATIHEMLSLTVEKKLTLERIAHFRLAMNLPKKLKDFLLQ 300
Query: 335 HQGIFYISTRGNFGKLHTVFLREGYRRSELVEPNDVYLARRKLAELVLLSPRKANLDREL 394
HQGIFYISTRGN GKLHTVFLREGYRR +LVEPNDVYLARR LAELVLLSPRKA LDREL
Sbjct: 301 HQGIFYISTRGNHGKLHTVFLREGYRRGDLVEPNDVYLARRHLAELVLLSPRKAKLDREL 360
Query: 395 VGYRRERVGYDMESFRTDYVKDKCDDFGVENKGNVRDVLDSDIGSDVECDFSDDDNHSVE 454
VGYRRERVGYDME+ RTDYV+DK DDFGVENKGNVRDVLDSDIGSDVE DFSDDDNHSVE
Sbjct: 361 VGYRRERVGYDMENCRTDYVEDKSDDFGVENKGNVRDVLDSDIGSDVESDFSDDDNHSVE 420
BLAST of PI0003197 vs. TAIR 10
Match:
AT4G33495.1 (Ubiquitin carboxyl-terminal hydrolase family protein )
HSP 1 Score: 597.0 bits (1538), Expect = 1.3e-170
Identity = 297/380 (78.16%), Postives = 332/380 (87.37%), Query Frame = 0
Query: 21 TTAYFLFNFTRSRSMSQSTSIPKNLQRVRDHGYDNYMEVEKKTRKVLKFQDLILSQYNQT 80
TT N + SQST+IPK RVRDHGYDNYMEVEKK RKV+KF LILSQ N T
Sbjct: 20 TTILPSINLILVKPFSQSTTIPKKQDRVRDHGYDNYMEVEKKIRKVVKFHSLILSQPNHT 79
Query: 81 IPVSRLDILARR--LGFKQHEAGAFVLKFPHVFEIYEHPVQRILYCRLTRQAHLQIAQQK 140
I +S LD LARR LGFKQHE GAF+LKFPHVFEIYEHPVQRILYCRLTR+A QI +
Sbjct: 80 IAISLLDTLARRLGLGFKQHEPGAFLLKFPHVFEIYEHPVQRILYCRLTRKALDQIRHEH 139
Query: 141 QAVIAQIPDAVTRLRKLLMMSNNGRLRLEHIRIARSEFGLPDDFEYSVVLKHPQFFRLFD 200
+AV+ QIPDAVTRLRKL+MMSN GR+RLEH+RIAR+EFGLP+DFEYSV+LKHPQFFRL D
Sbjct: 140 EAVLDQIPDAVTRLRKLVMMSNTGRIRLEHVRIARTEFGLPEDFEYSVILKHPQFFRLID 199
Query: 201 AKETRNKYIEIVERDPSLTVCAIERARERVYREKGSDAEDIRFSFIVNFPPGFKIGKYFR 260
+ETR+KYIEIVE+DP+L++CAIER RE YR KG DAED+RFSF+VNFPPGFKIGKYFR
Sbjct: 200 GEETRDKYIEIVEKDPNLSICAIERVREIEYRTKGIDAEDVRFSFVVNFPPGFKIGKYFR 259
Query: 261 IAMWKWQRLPYWSPYEDISEYDMRSIEAQKRMEKRAVATIHEMLSLTVEKKITLERIAHF 320
IA+WKWQRLPYWSPYEDIS YD+RS+EAQ R+EKR+VA IHE+LSLTVEKKITLERIAHF
Sbjct: 260 IAVWKWQRLPYWSPYEDISGYDLRSMEAQNRLEKRSVACIHELLSLTVEKKITLERIAHF 319
Query: 321 RLAMNLPKKLKDFLLQHQGIFYISTRGNFGKLHTVFLREGYRRSELVEPNDVYLARRKLA 380
R MNLPKKLK+FLLQHQGIFYISTRGN+GKLHTVFLREGY+R ELVEPNDVYLARR+LA
Sbjct: 320 RNVMNLPKKLKEFLLQHQGIFYISTRGNYGKLHTVFLREGYKRGELVEPNDVYLARRRLA 379
Query: 381 ELVLLSPRKANLDRELVGYR 399
ELVL+SPRKA +D ELV YR
Sbjct: 380 ELVLMSPRKAKVDAELVRYR 399
BLAST of PI0003197 vs. TAIR 10
Match:
AT5G45790.2 (Ubiquitin carboxyl-terminal hydrolase family protein )
HSP 1 Score: 231.1 bits (588), Expect = 1.8e-60
Identity = 150/393 (38.17%), Postives = 226/393 (57.51%), Query Frame = 0
Query: 17 TSFKTTAYFLFNFTRSRSMSQSTSIPKNLQ-RVRDHGYDNYMEVEKKTRKVLKFQDLILS 76
+SF YF + + R + S L+ R RDH D + +K +L+ L+ S
Sbjct: 40 SSFLCPLYF---YNQRRWLKPVDSAQTRLENRTRDHQLDKIIPQIRKLNIILEISKLMSS 99
Query: 77 QYNQTIPVSRLDILAR--RLGFKQHEAGAFVLKFPHVFEIYEHPVQRILYCRLTRQAHLQ 136
+ + P L +++R L GAF+ K+PH FEI+ HP + L C++T + +
Sbjct: 100 K--KRGPFVSLQLMSRWKNLVGLNVNVGAFIGKYPHAFEIFTHPFSKNLCCKITEKFKVL 159
Query: 137 IAQQKQAVIAQIPDAVTRLRKLLMMSNNGRLRLEHIRIARSEFGLPDDFEYSVVLKHPQF 196
I +++ V DAV R++KLL++S +G LR+ +R+ R E GLP+DF S++ K+
Sbjct: 160 IDEEENVVRECEVDAVKRVKKLLLLSKHGVLRVHALRLIRKELGLPEDFRDSILAKYSSE 219
Query: 197 FRLFDAKETRNKYIEIVER-DPSLTVCAIERARERVYREKGSDAEDIRFSFIVNFPPGFK 256
FRL D + +E+V+R D SL V +E RE YREK + ++F ++ P GFK
Sbjct: 220 FRLVDLET-----LELVDRDDESLCVAKVEEWREVEYREKWLSKFETNYAFPIHLPTGFK 279
Query: 257 IGKYFRIAMWKWQRLPYWSPYE--DISEYDMRSIEAQKRMEKRAVATIHEMLSLTVEKKI 316
I K FR + WQR+PY PY+ +IS R +E R EKR VA IHE+LSLTVEK +
Sbjct: 280 IEKGFREELKNWQRVPYVKPYDRKEIS----RGLE---RFEKRVVAVIHELLSLTVEKMV 339
Query: 317 TLERIAHFRLAMNLPKKLKDFLLQHQGIFYISTRGNFGKLHTVFLREGYRRSELVEPNDV 376
+ER+AHFR + + +++ +L+H GIFY+ST+G+ T+FLRE Y + L+EPN +
Sbjct: 340 EVERLAHFRKDLGIEVNVREVILKHPGIFYVSTKGS---SQTLFLREAYSKGCLIEPNPI 399
Query: 377 YLARRKLAELVLLSPRKAN--LDRELVGYRRER 402
Y RRK+ +LVLL R + L RE +R E+
Sbjct: 400 YNVRRKMLDLVLLKTRYSRMLLQREDETHREEK 412
BLAST of PI0003197 vs. TAIR 10
Match:
AT5G45790.1 (Ubiquitin carboxyl-terminal hydrolase family protein )
HSP 1 Score: 224.9 bits (572), Expect = 1.3e-58
Identity = 130/306 (42.48%), Postives = 191/306 (62.42%), Query Frame = 0
Query: 101 GAFVLKFPHVFEIYEHPVQRILYCRLTRQAHLQIAQQKQAVIAQIPDAVTRLRKLLMMSN 160
GAF+ K+PH FEI+ HP + L C++T + + I +++ V DAV R++KLL++S
Sbjct: 37 GAFIGKYPHAFEIFTHPFSKNLCCKITEKFKVLIDEEENVVRECEVDAVKRVKKLLLLSK 96
Query: 161 NGRLRLEHIRIARSEFGLPDDFEYSVVLKHPQFFRLFDAKETRNKYIEIVER-DPSLTVC 220
+G LR+ +R+ R E GLP+DF S++ K+ FRL D + +E+V+R D SL V
Sbjct: 97 HGVLRVHALRLIRKELGLPEDFRDSILAKYSSEFRLVDLET-----LELVDRDDESLCVA 156
Query: 221 AIERARERVYREKGSDAEDIRFSFIVNFPPGFKIGKYFRIAMWKWQRLPYWSPYE--DIS 280
+E RE YREK + ++F ++ P GFKI K FR + WQR+PY PY+ +IS
Sbjct: 157 KVEEWREVEYREKWLSKFETNYAFPIHLPTGFKIEKGFREELKNWQRVPYVKPYDRKEIS 216
Query: 281 EYDMRSIEAQKRMEKRAVATIHEMLSLTVEKKITLERIAHFRLAMNLPKKLKDFLLQHQG 340
R +E R EKR VA IHE+LSLTVEK + +ER+AHFR + + +++ +L+H G
Sbjct: 217 ----RGLE---RFEKRVVAVIHELLSLTVEKMVEVERLAHFRKDLGIEVNVREVILKHPG 276
Query: 341 IFYISTRGNFGKLHTVFLREGYRRSELVEPNDVYLARRKLAELVLLSPRKAN--LDRELV 400
IFY+ST+G+ T+FLRE Y + L+EPN +Y RRK+ +LVLL R + L RE
Sbjct: 277 IFYVSTKGS---SQTLFLREAYSKGCLIEPNPIYNVRRKMLDLVLLKTRYSRMLLQREDE 327
Query: 401 GYRRER 402
+R E+
Sbjct: 337 THREEK 327
BLAST of PI0003197 vs. TAIR 10
Match:
AT1G06440.1 (Ubiquitin carboxyl-terminal hydrolase family protein )
HSP 1 Score: 222.6 bits (566), Expect = 6.4e-58
Identity = 140/360 (38.89%), Postives = 200/360 (55.56%), Query Frame = 0
Query: 36 SQSTSIPKNLQRVRDHGYDNYMEVEKKTRKVLKFQDLILSQYNQTIPVSRLDILARRLGF 95
S +TS R RD ++ M+ K KV+ QDL L+ P ++ L+ RL
Sbjct: 23 STTTSAQYVASRSRDPVFEKLMDKYKNLLKVIAIQDLTLANPTADPPSLSIEFLS-RLSQ 82
Query: 96 KQH---EAGAFVLKFPHVFEIYEHPVQRILYCRLTRQAHLQIAQQKQAVIAQIPDAVTRL 155
K H A +F+ K+PH+F + PV+ +CRLT A Q+ A+ A + V RL
Sbjct: 83 KLHLNRGAASFLRKYPHIFHVLYDPVKAEPFCRLTDVAMEISRQEALAITATLSLVVDRL 142
Query: 156 RKLLMMSNNGRLRLEHIRIARSEFGLPDDFEYSVVLKHPQFFRLFDAKETRNKYIEIVER 215
+LL MS + + L + E GLPDDFE SV+ K+P F+L D E+ +E+V+
Sbjct: 143 VRLLSMSISKSIPLRAVFKVWRELGLPDDFEDSVISKNPHLFKLSDGHESNTHILELVQE 202
Query: 216 DPSLT--VCAIERAR--ERVYREKGSDAEDIRFSFIVNFPPGFKIGKYFRIAMWKWQRLP 275
+ A+E+ R E + D +I+FSF ++PPG ++ K F+ + +WQRLP
Sbjct: 203 EEKRLEFEAAVEKWRVVECSKEDCSVDRTEIQFSFKHSYPPGMRLSKTFKAKVKEWQRLP 262
Query: 276 YWSPYEDISEYDMRSIEAQKRMEKRAVATIHEMLSLTVEKKITLERIAHFRLAMNLPKKL 335
Y PYED+ +S +EKRAVA HE L+LTVEK + +E+I+HFR + +
Sbjct: 263 YVGPYEDMVG-KKKSRSGVMGIEKRAVAIAHEFLNLTVEKMVEVEKISHFRKCFGIDLNI 322
Query: 336 KDFLLQHQGIFYISTRGNFGKLHTVFLREGYRRSELVEPNDVYLARRKLAELVLLSPRKA 389
+D L H G+FY+ST+ GK HTVFLRE Y R L++PN VY ARRKL +LVLL A
Sbjct: 323 RDLFLDHPGMFYVSTK---GKRHTVFLREAYERGRLIDPNPVYDARRKLLDLVLLGRHAA 377
BLAST of PI0003197 vs. TAIR 10
Match:
AT4G01037.1 (Ubiquitin carboxyl-terminal hydrolase family protein )
HSP 1 Score: 147.9 bits (372), Expect = 2.0e-35
Identity = 122/426 (28.64%), Postives = 219/426 (51.41%), Query Frame = 0
Query: 45 LQRVRDHGYDNYMEVEKKTRKVLKFQDLILSQYNQTIPVSRLDILARRLGFKQHEAG-AF 104
++R ++ +D+ ++ +KK + VL + +++SQ ++ + + L R LG K+ A
Sbjct: 76 VKRRKELTFDSVVQRDKKLKLVLNIRKILVSQPDRMMSLRGLGKYRRDLGLKKRRRFIAL 135
Query: 105 VLKFPHVFEIYEHPVQRILYCRLTRQAHLQIAQQKQAVIAQIPDA-VTRLRKLLMMSNNG 164
+ K+P VFEI E + + ++T +A ++ + + ++ D V +LRKL+MMS +
Sbjct: 136 LRKYPGVFEIVEEGAYSLRF-KMTSEAE-RLYLDEMRIRNELEDVLVVKLRKLVMMSIDK 195
Query: 165 RLRLEHIRIARSEFGLPDDFEYSVVLKHPQFFRLFDAKETRNKYIEIVERDPSLTVCAIE 224
R+ LE I +++ GLP +F ++ ++PQ+FR+ R +E+ DP L V A E
Sbjct: 196 RILLEKISHLKTDLGLPLEFRDTICQRYPQYFRV--VPTPRGPALELTHWDPELAVSAAE 255
Query: 225 ------RARERVYREKGSDAEDIRFSFIVNFPPGFKIGKYFRIAMWKWQRLPYWSPYEDI 284
R RE R D +F+ V P G + K + +++ + Y SPY+D
Sbjct: 256 LSEDDNRTRESEERNLIIDRPP-KFN-RVKLPRGLNLSKSETRKISQFRDMQYISPYKDF 315
Query: 285 SEYDMRSIEAQKRMEKRAVATIHEMLSLTVEKKITLERIAHFRLAMNLPKKLKDFLLQHQ 344
S ++E EK A IHE+LSLT EK+ ++ + HFR ++L+ L++H
Sbjct: 316 SHLRSGTLE----KEKHACGVIHELLSLTTEKRTLVDHLTHFREEFRFSQQLRGMLIRHP 375
Query: 345 GIFYISTRGNFGKLHTVFLREGYRRSELVEPNDVYLARRKLAELVLLS--PRKANLDREL 404
+FY+S + G+ +VFLRE YR SEL++ + + L + K+ LV + PR+ ++
Sbjct: 376 DLFYVSLK---GERDSVFLREAYRNSELIDKDPLTLVKEKMRALVSVPRFPRRGGPRKDE 435
Query: 405 VGYRRERVGYDMESFRTDYVKDKCDDFGVENKGNVRDVLD-SDIGSDVECDFSDDDNHSV 460
G E G D + +++ ++ E +V L+ D G+D + D++DD+
Sbjct: 436 EGREVEIDGSDADG------EEEEEESDAEEWSDVDGYLEGEDGGNDDDGDWTDDEGEED 482
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q689D6 | 1.8e-169 | 78.16 | Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Arabidopsis thaliana OX=3702 GN=RPD1 PE=1... | [more] |
Q65XL5 | 3.8e-39 | 31.87 | Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Oryza sativa subsp. japon... | [more] |
B6TTV8 | 5.0e-39 | 30.86 | Protein WHAT'S THIS FACTOR 1, chloroplastic OS=Zea mays OX=4577 GN=WTF1 PE=1 SV=... | [more] |
A0MFS5 | 2.8e-34 | 28.64 | Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Arabidopsis thaliana OX=3... | [more] |
Q9ZUZ6 | 1.1e-22 | 27.58 | Protein WHAT'S THIS FACTOR 9, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=W... | [more] |
Match Name | E-value | Identity | Description | |
A0A1S4DS47 | 2.8e-250 | 95.89 | protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo OX=3656 GN=LOC103504628 PE=4... | [more] |
A0A5D3BLZ6 | 2.2e-231 | 95.79 | Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5... | [more] |
A0A0A0KLD1 | 2.9e-231 | 95.79 | PORR domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G173460 PE=4 S... | [more] |
A0A5A7UNY2 | 1.9e-227 | 95.71 | Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6... | [more] |
A0A6J1EMT6 | 4.0e-225 | 86.27 | protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucurbita moschata OX=3662 GN=LOC11143579... | [more] |
Match Name | E-value | Identity | Description | |
XP_016898810.1 | 5.7e-250 | 95.89 | PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo] >XP_016898811.1 PR... | [more] |
XP_004143708.2 | 5.9e-247 | 95.02 | protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis sativus] >KAE8647948.1 hypothetical... | [more] |
XP_038876292.1 | 8.0e-236 | 90.54 | protein ROOT PRIMORDIUM DEFECTIVE 1 [Benincasa hispida] >XP_038876293.1 protein ... | [more] |
TYK00294.1 | 4.5e-231 | 95.79 | protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo var. makuwa] | [more] |
KAA0055169.1 | 4.0e-227 | 95.71 | protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo var. makuwa] | [more] |
Match Name | E-value | Identity | Description | |
AT4G33495.1 | 1.3e-170 | 78.16 | Ubiquitin carboxyl-terminal hydrolase family protein | [more] |
AT5G45790.2 | 1.8e-60 | 38.17 | Ubiquitin carboxyl-terminal hydrolase family protein | [more] |
AT5G45790.1 | 1.3e-58 | 42.48 | Ubiquitin carboxyl-terminal hydrolase family protein | [more] |
AT1G06440.1 | 6.4e-58 | 38.89 | Ubiquitin carboxyl-terminal hydrolase family protein | [more] |
AT4G01037.1 | 2.0e-35 | 28.64 | Ubiquitin carboxyl-terminal hydrolase family protein | [more] |