Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACTGATTCTATTGACTCACATATTGACAGTAAATTGGGTGAGAATGACAAGTCCGAGACAAATTTTATTAACTCACACATCGATAGTAAAGTAGGTGAAAATGAGAATGACAGGTCCAAGATAGTAGGTCCTGAAGATATATGTGAAAAGGGCAACATTGAAGAGATTGAGGTCATTACAAATAAAAAGGACAATGTTGATGAGAATGAGGTCATTGTAGAGATGTTAGGGCTAGAATTGACCGAATAA
mRNA sequence
ATGACTGATTCTATTGACTCACATATTGACAGTAAATTGGGTGAGAATGACAAGTCCGAGACAAATTTTATTAACTCACACATCGATAGTAAAGTAGGTGAAAATGAGAATGACAGGTCCAAGATAGTAGGTCCTGAAGATATATGTGAAAAGGGCAACATTGAAGAGATTGAGGTCATTACAAATAAAAAGGACAATGTTGATGAGAATGAGGTCATTGTAGAGATGTTAGGGCTAGAATTGACCGAATAA
Coding sequence (CDS)
ATGACTGATTCTATTGACTCACATATTGACAGTAAATTGGGTGAGAATGACAAGTCCGAGACAAATTTTATTAACTCACACATCGATAGTAAAGTAGGTGAAAATGAGAATGACAGGTCCAAGATAGTAGGTCCTGAAGATATATGTGAAAAGGGCAACATTGAAGAGATTGAGGTCATTACAAATAAAAAGGACAATGTTGATGAGAATGAGGTCATTGTAGAGATGTTAGGGCTAGAATTGACCGAATAA
Protein sequence
MTDSIDSHIDSKLGENDKSETNFINSHIDSKVGENENDRSKIVGPEDICEKGNIEEIEVITNKKDNVDENEVIVEMLGLELTE
Homology
BLAST of PI0021759 vs. ExPASy TrEMBL
Match:
A0A5A7ULN2 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold314G00610 PE=4 SV=1)
HSP 1 Score: 70.1 bits (170), Expect = 5.0e-09
Identity = 41/78 (52.56%), Postives = 60/78 (76.92%), Query Frame = 0
Query: 1 MTDSIDSHIDSKLGENDKSETNFINSHIDSKVGE---NENDRSKIVGPEDICEKGNIEEI 60
M DSI S+I++++ EN++SE NF N+HIDSKVGE ++N+ + PED+ EKG+++
Sbjct: 43 MIDSIYSYINNRMSENNRSEMNFANTHIDSKVGEKDGSKNNGFEAAVPEDMVEKGSVD-- 102
Query: 61 EVITNKKDNVDENEVIVE 76
EVIT+++D VDENEVI E
Sbjct: 103 EVITDREDGVDENEVIAE 118
BLAST of PI0021759 vs. ExPASy TrEMBL
Match:
A0A5D3C538 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold178G00080 PE=4 SV=1)
HSP 1 Score: 69.3 bits (168), Expect = 8.5e-09
Identity = 40/78 (51.28%), Postives = 57/78 (73.08%), Query Frame = 0
Query: 1 MTDSIDSHIDSKLGENDKSETNFINSHIDSKVGENE---NDRSKIVGPEDICEKGNIEEI 60
MTDSIDSHI++++ ENDKSE N +H D KVGEN+ N+ S+ PED+ +KG+++
Sbjct: 541 MTDSIDSHINNRMSENDKSEMNSTKAHSDDKVGENDGSANNGSETAIPEDMVKKGSVD-- 600
Query: 61 EVITNKKDNVDENEVIVE 76
EVIT++ +DENEV+ E
Sbjct: 601 EVITDRYVKIDENEVVAE 616
BLAST of PI0021759 vs. ExPASy TrEMBL
Match:
A0A5A7SKD8 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold124G00320 PE=4 SV=1)
HSP 1 Score: 68.6 bits (166), Expect = 1.4e-08
Identity = 39/75 (52.00%), Postives = 59/75 (78.67%), Query Frame = 0
Query: 1 MTDSIDSHIDSKLGENDKSETNFINSHIDSKVGENENDRSKIVGPEDICEKGNIEEIEVI 60
MT+SI+SHI+ ++ END+S+TN +H +S VG +N++S+ V PED+ EKGN++ EVI
Sbjct: 1 MTNSIESHINYRMSENDRSKTNSTFTHTNSPVG--KNNKSETVVPEDMVEKGNVD--EVI 60
Query: 61 TNKKDNVDENEVIVE 76
T+K++ VDENEV+ E
Sbjct: 61 TDKENRVDENEVVAE 71
BLAST of PI0021759 vs. ExPASy TrEMBL
Match:
A0A5D3DHP8 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold142G00720 PE=4 SV=1)
HSP 1 Score: 68.6 bits (166), Expect = 1.4e-08
Identity = 39/75 (52.00%), Postives = 59/75 (78.67%), Query Frame = 0
Query: 1 MTDSIDSHIDSKLGENDKSETNFINSHIDSKVGENENDRSKIVGPEDICEKGNIEEIEVI 60
MT+SI+SHI+ ++ END+S+TN +H +S VG +N++S+ V PED+ EKGN++ EVI
Sbjct: 1 MTNSIESHINYRMSENDRSKTNSTFTHANSPVG--KNNKSETVVPEDMVEKGNVD--EVI 60
Query: 61 TNKKDNVDENEVIVE 76
T+K++ VDENEV+ E
Sbjct: 61 TDKENRVDENEVVAE 71
BLAST of PI0021759 vs. ExPASy TrEMBL
Match:
A0A5D3CYG7 (DExH-box ATP-dependent RNA helicase DExH6 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G001950 PE=4 SV=1)
HSP 1 Score: 67.8 bits (164), Expect = 2.5e-08
Identity = 43/76 (56.58%), Postives = 55/76 (72.37%), Query Frame = 0
Query: 1 MTDSIDSHIDSKLGENDKSETNFINSHIDSKVGEN---ENDRSKIVGPEDICEKGNIEEI 60
MTDSI+SHI NDK ETN N+HIDSKVGEN EN+ SK P+D+ EK N++
Sbjct: 155 MTDSINSHI------NDKFETNSTNTHIDSKVGENEGFENNGSKTDVPKDMVEKENVD-- 214
Query: 61 EVITNKKDNVDENEVI 74
EVIT+++D +DENEV+
Sbjct: 215 EVITDREDRIDENEVV 222
BLAST of PI0021759 vs. NCBI nr
Match:
KAA0055487.1 (putative mitochondrial protein [Cucumis melo var. makuwa] >TYK08967.1 putative mitochondrial protein [Cucumis melo var. makuwa])
HSP 1 Score: 70.1 bits (170), Expect = 1.0e-08
Identity = 41/78 (52.56%), Postives = 60/78 (76.92%), Query Frame = 0
Query: 1 MTDSIDSHIDSKLGENDKSETNFINSHIDSKVGE---NENDRSKIVGPEDICEKGNIEEI 60
M DSI S+I++++ EN++SE NF N+HIDSKVGE ++N+ + PED+ EKG+++
Sbjct: 43 MIDSIYSYINNRMSENNRSEMNFANTHIDSKVGEKDGSKNNGFEAAVPEDMVEKGSVD-- 102
Query: 61 EVITNKKDNVDENEVIVE 76
EVIT+++D VDENEVI E
Sbjct: 103 EVITDREDGVDENEVIAE 118
BLAST of PI0021759 vs. NCBI nr
Match:
KAA0063757.1 (reverse transcriptase [Cucumis melo var. makuwa] >TYK05509.1 reverse transcriptase [Cucumis melo var. makuwa])
HSP 1 Score: 69.3 bits (168), Expect = 1.7e-08
Identity = 40/78 (51.28%), Postives = 57/78 (73.08%), Query Frame = 0
Query: 1 MTDSIDSHIDSKLGENDKSETNFINSHIDSKVGENE---NDRSKIVGPEDICEKGNIEEI 60
MTDSIDSHI++++ ENDKSE N +H D KVGEN+ N+ S+ PED+ +KG+++
Sbjct: 541 MTDSIDSHINNRMSENDKSEMNSTKAHSDDKVGENDGSANNGSETAIPEDMVKKGSVD-- 600
Query: 61 EVITNKKDNVDENEVIVE 76
EVIT++ +DENEV+ E
Sbjct: 601 EVITDRYVKIDENEVVAE 616
BLAST of PI0021759 vs. NCBI nr
Match:
TYK23092.1 (putative mitochondrial protein [Cucumis melo var. makuwa])
HSP 1 Score: 68.6 bits (166), Expect = 3.0e-08
Identity = 39/75 (52.00%), Postives = 59/75 (78.67%), Query Frame = 0
Query: 1 MTDSIDSHIDSKLGENDKSETNFINSHIDSKVGENENDRSKIVGPEDICEKGNIEEIEVI 60
MT+SI+SHI+ ++ END+S+TN +H +S VG +N++S+ V PED+ EKGN++ EVI
Sbjct: 1 MTNSIESHINYRMSENDRSKTNSTFTHANSPVG--KNNKSETVVPEDMVEKGNVD--EVI 60
Query: 61 TNKKDNVDENEVIVE 76
T+K++ VDENEV+ E
Sbjct: 61 TDKENRVDENEVVAE 71
BLAST of PI0021759 vs. NCBI nr
Match:
KAA0025133.1 (putative mitochondrial protein [Cucumis melo var. makuwa])
HSP 1 Score: 68.6 bits (166), Expect = 3.0e-08
Identity = 39/75 (52.00%), Postives = 59/75 (78.67%), Query Frame = 0
Query: 1 MTDSIDSHIDSKLGENDKSETNFINSHIDSKVGENENDRSKIVGPEDICEKGNIEEIEVI 60
MT+SI+SHI+ ++ END+S+TN +H +S VG +N++S+ V PED+ EKGN++ EVI
Sbjct: 1 MTNSIESHINYRMSENDRSKTNSTFTHTNSPVG--KNNKSETVVPEDMVEKGNVD--EVI 60
Query: 61 TNKKDNVDENEVIVE 76
T+K++ VDENEV+ E
Sbjct: 61 TDKENRVDENEVVAE 71
BLAST of PI0021759 vs. NCBI nr
Match:
TYK16400.1 (DExH-box ATP-dependent RNA helicase DExH6 isoform X1 [Cucumis melo var. makuwa])
HSP 1 Score: 67.8 bits (164), Expect = 5.1e-08
Identity = 43/76 (56.58%), Postives = 55/76 (72.37%), Query Frame = 0
Query: 1 MTDSIDSHIDSKLGENDKSETNFINSHIDSKVGEN---ENDRSKIVGPEDICEKGNIEEI 60
MTDSI+SHI NDK ETN N+HIDSKVGEN EN+ SK P+D+ EK N++
Sbjct: 155 MTDSINSHI------NDKFETNSTNTHIDSKVGENEGFENNGSKTDVPKDMVEKENVD-- 214
Query: 61 EVITNKKDNVDENEVI 74
EVIT+++D +DENEV+
Sbjct: 215 EVITDREDRIDENEVV 222
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5A7ULN2 | 5.0e-09 | 52.56 | Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s... | [more] |
A0A5D3C538 | 8.5e-09 | 51.28 | Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold17... | [more] |
A0A5A7SKD8 | 1.4e-08 | 52.00 | Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s... | [more] |
A0A5D3DHP8 | 1.4e-08 | 52.00 | Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s... | [more] |
A0A5D3CYG7 | 2.5e-08 | 56.58 | DExH-box ATP-dependent RNA helicase DExH6 isoform X1 OS=Cucumis melo var. makuwa... | [more] |
Match Name | E-value | Identity | Description | |
KAA0055487.1 | 1.0e-08 | 52.56 | putative mitochondrial protein [Cucumis melo var. makuwa] >TYK08967.1 putative m... | [more] |
KAA0063757.1 | 1.7e-08 | 51.28 | reverse transcriptase [Cucumis melo var. makuwa] >TYK05509.1 reverse transcripta... | [more] |
TYK23092.1 | 3.0e-08 | 52.00 | putative mitochondrial protein [Cucumis melo var. makuwa] | [more] |
KAA0025133.1 | 3.0e-08 | 52.00 | putative mitochondrial protein [Cucumis melo var. makuwa] | [more] |
TYK16400.1 | 5.1e-08 | 56.58 | DExH-box ATP-dependent RNA helicase DExH6 isoform X1 [Cucumis melo var. makuwa] | [more] |
Match Name | E-value | Identity | Description | |