Sequences
The following sequences are available for this feature:
Legend: CDS polypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATCTGTGATGATGAAAATCGGGTACAAGCAGCGATGATTTCTACCCAGGGTTTGGGAAGCCCCCTAATGGTAGAAATCCTTGCTATCAGAGAAGGAATTCGTTTGGCGATCCGGATGGGTTTCAGTAAGGTGGTGGTCGAATCTGACTCCCTCGAAGCGGTTAAACTAATAGAGAAG
ATCTGTGATGATGAAAATCGGGTACAAGCAGCGATGATTTCTACCCAGGGTTTGGGAAGCCCCCTAATGGTAGAAATCCTTGCTATCAGAGAAGGAATTCGTTTGGCGATCCGGATGGGTTTCAGTAAGGTGGTGGTCGAATCTGACTCCCTCGAAGCGGTTAAACTAATAGAGAAG
ATCTGTGATGATGAAAATCGGGTACAAGCAGCGATGATTTCTACCCAGGGTTTGGGAAGCCCCCTAATGGTAGAAATCCTTGCTATCAGAGAAGGAATTCGTTTGGCGATCCGGATGGGTTTCAGTAAGGTGGTGGTCGAATCTGACTCCCTCGAAGCGGTTAAACTAATAGAGAAG
ICDDENRVQAAMISTQGLGSPLMVEILAIREGIRLAIRMGFSKVVVESDSLEAVKLIEK
Homology
BLAST of MS015400 vs. NCBI nr
Match:
XP_022155289.1 (uncharacterized protein LOC111022426 [Momordica charantia])
HSP 1 Score: 59.3 bits (142), Expect = 1.3e-05
Identity = 31/55 (56.36%), Postives = 40/55 (72.73%), Query Frame = 0
BLAST of MS015400 vs. NCBI nr
Match:
KAF1879364.1 (hypothetical protein Lal_00005830 [Lupinus albus])
HSP 1 Score: 53.5 bits (127), Expect = 7.1e-04
Identity = 25/57 (43.86%), Postives = 41/57 (71.93%), Query Frame = 0
BLAST of MS015400 vs. ExPASy TrEMBL
Match:
A0A6J1DPU1 (uncharacterized protein LOC111022426 OS=Momordica charantia OX=3673 GN=LOC111022426 PE=4 SV=1)
HSP 1 Score: 59.3 bits (142), Expect = 6.2e-06
Identity = 31/55 (56.36%), Postives = 40/55 (72.73%), Query Frame = 0
BLAST of MS015400 vs. ExPASy TrEMBL
Match:
A0A6A5MX02 (Uncharacterized protein OS=Lupinus albus OX=3870 GN=Lal_00005830 PE=4 SV=1)
HSP 1 Score: 53.5 bits (127), Expect = 3.4e-04
Identity = 25/57 (43.86%), Postives = 41/57 (71.93%), Query Frame = 0
The following BLAST results are available for this feature:
Match Name E-value Identity Description
XP_022155289.1 1.3e-05 56.36 uncharacterized protein LOC111022426 [Momordica charantia] [more] KAF1879364.1 7.1e-04 43.86 hypothetical protein Lal_00005830 [Lupinus albus] [more]
Match Name E-value Identity Description
Match Name E-value Identity Description
A0A6J1DPU1 6.2e-06 56.36 uncharacterized protein LOC111022426 OS=Momordica charantia OX=3673 GN=LOC111022... [more] A0A6A5MX02 3.4e-04 43.86 Uncharacterized protein OS=Lupinus albus OX=3870 GN=Lal_00005830 PE=4 SV=1 [more]
Match Name E-value Identity Description
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
A T C T G T G A T G A T G A A A A T C G G G T A C A A G C A G C G A T G A T T T C T A C C C A G G G T T T G G G A A G C C C C C T A A T G G T A G A A A T C C T T G C T A T C A G A G A A G G A A T T C G T T T G G C G A T C C G G A T G G G T T T C A G T A A G G T G G T G G T C G A A T C T G A C T C C C T C G A A G C G G T T A A A C T A A T A G A G A A G 20 40 60 80 100 120 140 160 Expect = 1.0E-5 / Score = 27.6 Expect = 2.7E-9 / Score = 36.9 Expect = 9.35467E-15 / Score = 60.7908 Score = Sequence G3DSA:3.30.420.10 PF13456 cd06222 SSF53098
IPR Term IPR Description Source Source Term Source Description Alignment
IPR036397 Ribonuclease H superfamily GENE3D 3.30.420.10 coord: 1..59 IPR002156 Ribonuclease H domain PFAM PF13456 RVT_3 coord: 1..58 IPR044730 Ribonuclease H-like domain, plant type CDD cd06222 RNase_H_like coord: 1..59 IPR012337 Ribonuclease H-like superfamily SUPERFAMILY 53098 Ribonuclease H-like coord: 12..58
Relationships
The following mRNA feature(s) are a part of this gene:
Feature Name Unique Name Type
MS015400.1 MS015400.1 mRNA
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category
Term Accession
Term Name
molecular_function
GO:0003676 nucleic acid binding
molecular_function
GO:0004523 RNA-DNA hybrid ribonuclease activity
