MS009459.1 (mRNA) Bitter gourd (TR) v1

Overview


Name	MS009459.1
Type	mRNA
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	centromere protein C isoform X1
Location	scaffold813: 1449266 .. 1453285 (+)
Sequence length	1974
RNA-Seq Expression	MS009459.1
Synteny	MS009459.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CTAAATTTCCAGGTCTCAAGAAGTCCTAGTAAACTTATAGAGCAGGCCAGAGCCATTTTAGACGGTAACTCAAATGTGATGCACTCTGAAATTGCAACATTTCTTGTACATGATGATGAAAACAAAGAAACTACAGCAAAGGTGGAGGAAAATCCACAAGAAAGAAGGCCAGCATTAAACCGTAAGCGGGCAAGGTTTTCTTTAAAACCTGATACTAGGTAATGCATATAATTTACCTGCCTTTTCTTAAGAAAGGAAAAAAAAATCTGGTTGACTTTTATGATATCGTTATCTGATAGACAACCTGCTGTTAACTTGGAGGCAACATTCAACATTAAACAATTGAAAGACCCCGAGGAGTTCTTTTTGGCCTTTGAAAGGCTTGAAAGTAAGTTGTGCTAATTTGTTTTACAACCCAAATTTCAGATGCATTTAGAATTCACATATTTTTCTTCCCATTGTGCAATTGCTCCATAGATGCCAAAATAGAAATACAGAAACAAACGGGAGGAGTTTTGAAGGACTTGAACCAACAGAATCCATCCACGAATACACGCCACCGTAGACCAGGGATTCTTGGGTATAATCACTACCATGCTATTATATTAACAAAATTTTGTGTCTTTTCTTTGCGGCATCATTTTTGTTTGGGAACCAAAATTTGGTTGTTGTCCATGCAGGAGGTCTGTTAGATACAAGCATCAATATTCATCAATAACATCTGAAGATGATCAGAACGTAGAACCCTCTCAAGTTACATTTGAATCAGGTAATATTAGTCCATCAATAATGGGCACAGAAAAATGTCCCAGTCCACCTATAATTGGCTCAGAAAAGAGAACTGGTGAACATGTCCCATTTGAGGAGGAGGAGGAGGAGGAGGAGTTAGTTAGTAAGTAATTTCTAATGGAGATTTATAATGCAACATTCTGCAAGCATCATGGTCCAGTAGATTTTAGATATCTCAAATATCATTGTCCTCTCCCCCTTTCCTCTCCCTCTCTTATTTTTTCATATTTCGGTGTCAGTGTAGACCTTTTTTTGATGCTATGATATTTTTTTCCTCTTTGCAGCCTCAATCACCAAGTCAGAGAACAAAGTGAATAGAATTTTGGATGAGTTACTGTCGGCTAACTGTGAAGATTTAGAAGGTGATCGAGCCATCAACAAATTACAGGAATGCTTGCAGATTAAACCCATCAATTTAGAGAAATTATGCCTTCCAGATTTGCAAGCTATTCAGACAGTGAATTTGAAATCTTCAAGAGGCAATGCGCCAAAGCGTAGTTTGATCAGTGTGGACAATCAATTACAAAGGATAGAGACTTCGAAGTTTAAGCAGGATGATGAAAGTTCTGTTCATCTGCTTTCTACGCCATCCTCAATGAAAAGTCCATTGGCATCAGTATTAGCCCTAAATAGGCAAATTTTGCTTTCAAATTCATCAAGTGATCCATTTTCAGCTCATGACATTGACAAGTCCCCAGCAAGAAATCCTTCCTTTTCTGAACACATTAATCACTTGTCTGACATAGTTGATATTGCAAAGCAGTCGAGTGTTTCTAAACTGAAGTCACCTTTAACCAAAGATGGTGAGGCTGTACCTAATGGAATTAGGTCACCCAAATGCCCTATTGGAGATGTTGATTCTATGTCTAAAATATCTTTGGCTAATGTTTTAAATGTACCCGAAGTTGGTGGCAATGCTGCCTTAAATGGAAGTCATGCCAGCATGGAAGCTAAGGAAATTAGTGGTAGCGACACAGAAGTGGAAGTAAATAAGAAATTGAGTTGTCTTGGAGCCAAAGCAGATGGTTTGGCTAATGCATCAAATGCATTGGATGATGAGGTGCATTTTGTTGTGCTAGTAAATAAGAAATTGAGTTGTCTTGGAGCCAAAGCAGATGGTTTGGCTAATGCATCAAATGCATTGGATGATGAGGTGCATTTTGTTGTGCTAGTTACTATTTTTACCGCTGCCCTTTAGAGTTATAAATGTTTTGAAGTTGGATATTGTGTTTGTTGTGACAATAAACAGATGGAAGATCATGATGAATTAGCTTCAGAGCAACTGAACACATCCAAGGTGGATGCGACTAAAGAGTATCCGTTTGGTATTCAGAGTCAGTTGGGTATGATCACCAGTACCAGAATCATTAGTTGCTCTAGCTGATAATTTCTTTTACAATCTTGTCTAAGGGAAATTATAACCAAACGTTATGTTATTGCTCATCTTAGTGCTTTTGATGGTTGGACTTTTTTTTTAATAATAAATTTAGGATAAATATGTTCTTCTAGATCTGAGGACTAATATATAACTTTATAAGAAATATGTCCTTGATTTTGAAATAAATTTTAGTAGTTAAGCGTGTACCACTTCAATGCTTCACATTATGAAGGAACTCTATAACTATGATGTGTTCTTCTGAATGAAAAGACACATGCTAAAATATTTTTCAATCATGTTATAATTATGAATTGATTTCAGCTTTCTCATATGAAGAACCATTTTCTTTCTTCACAGATTGCACTGTTTATGTTCTTCCATTTTTAGGTTGAAAAGGCAGAAATTAATTGTTTGCTTAATAATTCCCAGTAGATGGATTAGATGATTTCAGACTCTGCATCCTTTGTTTTTTAACAGATCAATCAACTGCTACTTCTACTGATAATAATGTAGACGGGGTGTCCAGGAGCAGTGGAACGGATCACCATGATAAGGTTTTTGACCTTTCCTTTCTTTTTTCCTCTCTTGGACCTTTATTTCCCGTTGCTAATTATTGATGACTTGAAGTGCTTTGTCAAATTATGGTGTTTGTGAAATATGAAGACTTTCTTTATTGTGGTTACCATTGTCCTAAGGAAGTACTGTTTTTTCTTTTTCTAATTAATATATATATATATATATATATATATATATATATATAAATAAAATAAACAATTAACACTTAATTATTTATTGCAAAAATAGAATCATATTCTATAGCNGTTCATTTTTTCCTGCCCGTGTTTGTTTCATAATTCTTAATTTCTCAAAACTACTAATATTGTCACATTATTGTTTACTATTGCTTGATTTCATGTGCTATTCTATTTTTATTAATGTATTGCCTGCTAAAATTTAAAATTAGTAGCAGCATACCAACTCCACTCGCTGCCCCTATGTACTCCGTAGAACATTAGGAATAAGTAAATTAACTTGTCACCACCGAAGGAAGAAATTAGAAAATGATAAAGACCCCTCCTTTTGTTAACTCTACTTGTTTGCTAGAACATGGTTGTTACTGATTTGACTTTTGAGAGAAAATCAAGGATTTTTTGGGTTTTTGATGTATGAACAGGTCAAGCCAAAATCTCATGCAAACAAACAACGCAAAGACAAAAACATTTCTCGGAGGCAAAGCCTTGCAGGTGTTTATACGTAAATTTAACTCAAATTTTAAATTCTATATTATTTAGATTTTTCTTCTGAAAATACTTTGCATATCTGCTAATCTTTCCAGGGGCTGGTACAAAGTGGGAAAGTGGGGTAAGAAGAAGTACGAGGTTCAAAACACGACCTTTGGAGTATTGGAAAGGTGAAAGGCTGTTGTATGGACGTGTACATCAGAGTAAGTGGACGCTTATTATTGCAACTTTCTTTGTTAATGTCTTTCATCAATAGGCATATCCATATGTACATGTTTCTCTTTCTCACAAATTCCTTATTTAAGACTCTTTTCGATTGACAATATTTTGTTAGTCCTGAATGTGGACATGCCTAAAGTCGAGTTTTTCTTCTTGTTCAATTTTAATAAACCATTATATGAACTGGTAAAATAAATGAGTGTTCTTCGATCTTATTCCATGGTGCTATTTCATGTGCATGTAAACTAATTACCGGACTCCTCCTTAGGCCTGGCAACAGTAATCGGGATGAAGTATGTGTCTCCAGCAAAAGGTAATGGCCAACCAACTCTGAAGGTGAAGTCTCTGGTCTCTAACAAGTACAAAGAACTAGTTGAGTTTGCAGCTCTGCAC

mRNA sequence

CTAAATTTCCAGGTCTCAAGAAGTCCTAGTAAACTTATAGAGCAGGCCAGAGCCATTTTAGACGGTAACTCAAATGTGATGCACTCTGAAATTGCAACATTTCTTGTACATGATGATGAAAACAAAGAAACTACAGCAAAGGTGGAGGAAAATCCACAAGAAAGAAGGCCAGCATTAAACCGTAAGCGGGCAAGGTTTTCTTTAAAACCTGATACTAGACAACCTGCTGTTAACTTGGAGGCAACATTCAACATTAAACAATTGAAAGACCCCGAGGAGTTCTTTTTGGCCTTTGAAAGGCTTGAAAATGCCAAAATAGAAATACAGAAACAAACGGGAGGAGTTTTGAAGGACTTGAACCAACAGAATCCATCCACGAATACACGCCACCGTAGACCAGGGATTCTTGGGAGGTCTGTTAGATACAAGCATCAATATTCATCAATAACATCTGAAGATGATCAGAACGTAGAACCCTCTCAAGTTACATTTGAATCAGGTAATATTAGTCCATCAATAATGGGCACAGAAAAATGTCCCAGTCCACCTATAATTGGCTCAGAAAAGAGAACTGGTGAACATGTCCCATTTGAGGAGGAGGAGGAGGAGGAGGAGTTAGTTACCTCAATCACCAAGTCAGAGAACAAAGTGAATAGAATTTTGGATGAGTTACTGTCGGCTAACTGTGAAGATTTAGAAGGTGATCGAGCCATCAACAAATTACAGGAATGCTTGCAGATTAAACCCATCAATTTAGAGAAATTATGCCTTCCAGATTTGCAAGCTATTCAGACAGTGAATTTGAAATCTTCAAGAGGCAATGCGCCAAAGCGTAGTTTGATCAGTGTGGACAATCAATTACAAAGGATAGAGACTTCGAAGTTTAAGCAGGATGATGAAAGTTCTGTTCATCTGCTTTCTACGCCATCCTCAATGAAAAGTCCATTGGCATCAGTATTAGCCCTAAATAGGCAAATTTTGCTTTCAAATTCATCAAGTGATCCATTTTCAGCTCATGACATTGACAAGTCCCCAGCAAGAAATCCTTCCTTTTCTGAACACATTAATCACTTGTCTGACATAGTTGATATTGCAAAGCAGTCGAGTGTTTCTAAACTGAAGTCACCTTTAACCAAAGATGGTGAGGCTGTACCTAATGGAATTAGGTCACCCAAATGCCCTATTGGAGATGTTGATTCTATGTCTAAAATATCTTTGGCTAATGTTTTAAATGTACCCGAAGTTGGTGGCAATGCTGCCTTAAATGGAAGTCATGCCAGCATGGAAGCTAAGGAAATTAGTGGTAGCGACACAGAAGTGGAAGTAAATAAGAAATTGAGTTGTCTTGGAGCCAAAGCAGATGGTTTGGCTAATGCATCAAATGCATTGGATGATGAGGTGCATTTTGTTGTGCTAGTAAATAAGAAATTGAGTTGTCTTGGAGCCAAAGCAGATGGTTTGGCTAATGCATCAAATGCATTGGATGATGAGGTGCATTTTATGGAAGATCATGATGAATTAGCTTCAGAGCAACTGAACACATCCAAGGTGGATGCGACTAAAGAGTATCCGTTTGGTATTCAGAGTCAGTTGGATCAATCAACTGCTACTTCTACTGATAATAATGTAGACGGGGTGTCCAGGAGCAGTGGAACGGATCACCATGATAAGGTCAAGCCAAAATCTCATGCAAACAAACAACGCAAAGACAAAAACATTTCTCGGAGGCAAAGCCTTGCAGGGGCTGGTACAAAGTGGGAAAGTGGGGTAAGAAGAAGTACGAGGTTCAAAACACGACCTTTGGAGTATTGGAAAGGTGAAAGGCTGTTGTATGGACGTGTACATCAGAGCCTGGCAACAGTAATCGGGATGAAGTATGTGTCTCCAGCAAAAGGTAATGGCCAACCAACTCTGAAGGTGAAGTCTCTGGTCTCTAACAAGTACAAAGAACTAGTTGAGTTTGCAGCTCTGCAC

Coding sequence (CDS)

CTAAATTTCCAGGTCTCAAGAAGTCCTAGTAAACTTATAGAGCAGGCCAGAGCCATTTTAGACGGTAACTCAAATGTGATGCACTCTGAAATTGCAACATTTCTTGTACATGATGATGAAAACAAAGAAACTACAGCAAAGGTGGAGGAAAATCCACAAGAAAGAAGGCCAGCATTAAACCGTAAGCGGGCAAGGTTTTCTTTAAAACCTGATACTAGACAACCTGCTGTTAACTTGGAGGCAACATTCAACATTAAACAATTGAAAGACCCCGAGGAGTTCTTTTTGGCCTTTGAAAGGCTTGAAAATGCCAAAATAGAAATACAGAAACAAACGGGAGGAGTTTTGAAGGACTTGAACCAACAGAATCCATCCACGAATACACGCCACCGTAGACCAGGGATTCTTGGGAGGTCTGTTAGATACAAGCATCAATATTCATCAATAACATCTGAAGATGATCAGAACGTAGAACCCTCTCAAGTTACATTTGAATCAGGTAATATTAGTCCATCAATAATGGGCACAGAAAAATGTCCCAGTCCACCTATAATTGGCTCAGAAAAGAGAACTGGTGAACATGTCCCATTTGAGGAGGAGGAGGAGGAGGAGGAGTTAGTTACCTCAATCACCAAGTCAGAGAACAAAGTGAATAGAATTTTGGATGAGTTACTGTCGGCTAACTGTGAAGATTTAGAAGGTGATCGAGCCATCAACAAATTACAGGAATGCTTGCAGATTAAACCCATCAATTTAGAGAAATTATGCCTTCCAGATTTGCAAGCTATTCAGACAGTGAATTTGAAATCTTCAAGAGGCAATGCGCCAAAGCGTAGTTTGATCAGTGTGGACAATCAATTACAAAGGATAGAGACTTCGAAGTTTAAGCAGGATGATGAAAGTTCTGTTCATCTGCTTTCTACGCCATCCTCAATGAAAAGTCCATTGGCATCAGTATTAGCCCTAAATAGGCAAATTTTGCTTTCAAATTCATCAAGTGATCCATTTTCAGCTCATGACATTGACAAGTCCCCAGCAAGAAATCCTTCCTTTTCTGAACACATTAATCACTTGTCTGACATAGTTGATATTGCAAAGCAGTCGAGTGTTTCTAAACTGAAGTCACCTTTAACCAAAGATGGTGAGGCTGTACCTAATGGAATTAGGTCACCCAAATGCCCTATTGGAGATGTTGATTCTATGTCTAAAATATCTTTGGCTAATGTTTTAAATGTACCCGAAGTTGGTGGCAATGCTGCCTTAAATGGAAGTCATGCCAGCATGGAAGCTAAGGAAATTAGTGGTAGCGACACAGAAGTGGAAGTAAATAAGAAATTGAGTTGTCTTGGAGCCAAAGCAGATGGTTTGGCTAATGCATCAAATGCATTGGATGATGAGGTGCATTTTGTTGTGCTAGTAAATAAGAAATTGAGTTGTCTTGGAGCCAAAGCAGATGGTTTGGCTAATGCATCAAATGCATTGGATGATGAGGTGCATTTTATGGAAGATCATGATGAATTAGCTTCAGAGCAACTGAACACATCCAAGGTGGATGCGACTAAAGAGTATCCGTTTGGTATTCAGAGTCAGTTGGATCAATCAACTGCTACTTCTACTGATAATAATGTAGACGGGGTGTCCAGGAGCAGTGGAACGGATCACCATGATAAGGTCAAGCCAAAATCTCATGCAAACAAACAACGCAAAGACAAAAACATTTCTCGGAGGCAAAGCCTTGCAGGGGCTGGTACAAAGTGGGAAAGTGGGGTAAGAAGAAGTACGAGGTTCAAAACACGACCTTTGGAGTATTGGAAAGGTGAAAGGCTGTTGTATGGACGTGTACATCAGAGCCTGGCAACAGTAATCGGGATGAAGTATGTGTCTCCAGCAAAAGGTAATGGCCAACCAACTCTGAAGGTGAAGTCTCTGGTCTCTAACAAGTACAAAGAACTAGTTGAGTTTGCAGCTCTGCAC

Protein sequence

LNFQVSRSPSKLIEQARAILDGNSNVMHSEIATFLVHDDENKETTAKVEENPQERRPALNRKRARFSLKPDTRQPAVNLEATFNIKQLKDPEEFFLAFERLENAKIEIQKQTGGVLKDLNQQNPSTNTRHRRPGILGRSVRYKHQYSSITSEDDQNVEPSQVTFESGNISPSIMGTEKCPSPPIIGSEKRTGEHVPFEEEEEEEELVTSITKSENKVNRILDELLSANCEDLEGDRAINKLQECLQIKPINLEKLCLPDLQAIQTVNLKSSRGNAPKRSLISVDNQLQRIETSKFKQDDESSVHLLSTPSSMKSPLASVLALNRQILLSNSSSDPFSAHDIDKSPARNPSFSEHINHLSDIVDIAKQSSVSKLKSPLTKDGEAVPNGIRSPKCPIGDVDSMSKISLANVLNVPEVGGNAALNGSHASMEAKEISGSDTEVEVNKKLSCLGAKADGLANASNALDDEVHFVVLVNKKLSCLGAKADGLANASNALDDEVHFMEDHDELASEQLNTSKVDATKEYPFGIQSQLDQSTATSTDNNVDGVSRSSGTDHHDKVKPKSHANKQRKDKNISRRQSLAGAGTKWESGVRRSTRFKTRPLEYWKGERLLYGRVHQSLATVIGMKYVSPAKGNGQPTLKVKSLVSNKYKELVEFAALH

Homology

[Close]

BLAST of MS009459.1 vs. NCBI nr
Match: XP_022154052.1 (centromere protein C isoform X1 [Momordica charantia] >XP_022154062.1 centromere protein C isoform X2 [Momordica charantia])

HSP 1 Score: 1164.8 bits (3012), Expect = 0.0e+00
Identity = 620/658 (94.22%), Postives = 620/658 (94.22%), Query Frame = 0


Query: 1   LNFQVSRSPSKLIEQARAILDGNSNVMHSEIATFLVHDDENKETTAKVEENPQERRPALN 60
           L   VSRSPSKLIEQARAILDGNSNVMHSEIATFLVHDDENKETTAKVEENPQERRPALN
Sbjct: 51  LKSMVSRSPSKLIEQARAILDGNSNVMHSEIATFLVHDDENKETTAKVEENPQERRPALN 110

Query: 61  RKRARFSLKPDTRQPAVNLEATFNIKQLKDPEEFFLAFERLENAKIEIQKQTGGVLKDLN 120
           RKRARFSLKPDTRQPAVNLEATFNIKQLKDPEEFFLAFERLENAKIEIQKQT GVLKDLN
Sbjct: 111 RKRARFSLKPDTRQPAVNLEATFNIKQLKDPEEFFLAFERLENAKIEIQKQTRGVLKDLN 170

Query: 121 QQNPSTNTRHRRPGILGRSVRYKHQYSSITSEDDQNVEPSQVTFESGNISPSIMGTEKCP 180
           QQNPSTNTRHRRPGILGRSVRYKHQYSSITSEDDQNVEPSQVTFESGNISPSIMGTEKCP
Sbjct: 171 QQNPSTNTRHRRPGILGRSVRYKHQYSSITSEDDQNVEPSQVTFESGNISPSIMGTEKCP 230

Query: 181 SPPIIGSEKRTGEHVPFEEEEEEEELVTSITKSENKVNRILDELLSANCEDLEGDRAINK 240
           SPPIIGSEKRTGEHVPFEEEEEEEELVTSITKSENKVNRILDELLSANCEDLEGDRAINK
Sbjct: 231 SPPIIGSEKRTGEHVPFEEEEEEEELVTSITKSENKVNRILDELLSANCEDLEGDRAINK 290

Query: 241 LQECLQIKPINLEKLCLPDLQAIQTVNLKSSRGNAPKRSLISVDNQLQRIETSKFKQDDE 300
           LQECLQIKPINLEKLCLPDLQAIQTVNLKSSRGNAPKRSLISVDNQLQRIETSKFKQDDE
Sbjct: 291 LQECLQIKPINLEKLCLPDLQAIQTVNLKSSRGNAPKRSLISVDNQLQRIETSKFKQDDE 350

Query: 301 SSVHLLSTPSSMKSPLASVLALNRQILLSNSSSDPFSAHDIDKSPARNPSFSEHINHLSD 360
           SSVHLLSTPSSMKSPLASVLALNRQILLSNSSSDPFSAHDIDKSPARNPSFSEHINHLSD
Sbjct: 351 SSVHLLSTPSSMKSPLASVLALNRQILLSNSSSDPFSAHDIDKSPARNPSFSEHINHLSD 410

Query: 361 IVDIAKQSSVSKLKSPLTKDGEAVPNGIRSPKCPIGDVDSMSKISLANVLNVPEVGGNAA 420
           IVDIAKQSSVSKLKSPLTKDGEAVPNGIRSPKCPIGDVDSMSKISLANVLNVPEVGGNAA
Sbjct: 411 IVDIAKQSSVSKLKSPLTKDGEAVPNGIRSPKCPIGDVDSMSKISLANVLNVPEVGGNAA 470

Query: 421 LNGSHASMEAKEISGSDTEVEVNKKLSCLGAKADGLANASNALDDEVHFVVLVNKKLSCL 480
           LNGSHASMEAKEISGSDTEVEVNKKLSCLGAKADGLANASNALDDE              
Sbjct: 471 LNGSHASMEAKEISGSDTEVEVNKKLSCLGAKADGLANASNALDDE-------------- 530

Query: 481 GAKADGLANASNALDDEVHFMEDHDELASEQLNTSKVDATKEYPFGIQSQLDQSTATSTD 540
                               MEDHDELASEQLNTSKVDATKEYPFGIQSQLDQSTATSTD
Sbjct: 531 --------------------MEDHDELASEQLNTSKVDATKEYPFGIQSQLDQSTATSTD 590

Query: 541 NNVDGVSRSSGTDHHDKVKPKSHANKQRKDKNISRRQSLAGAGTKWESGVRRSTRFKTRP 600
           NNVDGVSRSSGTDHHDKVKPKSHANKQRKDKNISRRQSLAGAGTKWESGVRRSTRFKTRP
Sbjct: 591 NNVDGVSRSSGTDHHDKVKPKSHANKQRKDKNISRRQSLAGAGTKWESGVRRSTRFKTRP 650

Query: 601 LEYWKGERLLYGRVHQSLATVIGMKYVSPAKGNGQPTLKVKSLVSNKYKELVEFAALH 659
           LEYWKGERLLYGRVHQSLATVIGMKYVSPAKGNGQPTLKVKSLVSNKYKELVEFAALH
Sbjct: 651 LEYWKGERLLYGRVHQSLATVIGMKYVSPAKGNGQPTLKVKSLVSNKYKELVEFAALH 674

[Close]

BLAST of MS009459.1 vs. NCBI nr
Match: XP_022154071.1 (centromere protein C isoform X3 [Momordica charantia])

HSP 1 Score: 1062.8 bits (2747), Expect = 1.2e-306
Identity = 578/658 (87.84%), Postives = 578/658 (87.84%), Query Frame = 0


Query: 1   LNFQVSRSPSKLIEQARAILDGNSNVMHSEIATFLVHDDENKETTAKVEENPQERRPALN 60
           L   VSRSPSKLIEQARAILDGNSNVMHSEIATFLVHDDENKETTAKVEENPQERRPALN
Sbjct: 51  LKSMVSRSPSKLIEQARAILDGNSNVMHSEIATFLVHDDENKETTAKVEENPQERRPALN 110

Query: 61  RKRARFSLKPDTRQPAVNLEATFNIKQLKDPEEFFLAFERLENAKIEIQKQTGGVLKDLN 120
           RKRARFSLKPDTRQPAVNLEATFNIKQLKDPEEFFLAFERLENAKIEIQKQT GVLKDLN
Sbjct: 111 RKRARFSLKPDTRQPAVNLEATFNIKQLKDPEEFFLAFERLENAKIEIQKQTRGVLKDLN 170

Query: 121 QQNPSTNTRHRRPGILGRSVRYKHQYSSITSEDDQNVEPSQVTFESGNISPSIMGTEKCP 180
           QQNPSTNTRHRRPGILGRSVRYKHQYSSITSEDDQNVEPSQVTFES              
Sbjct: 171 QQNPSTNTRHRRPGILGRSVRYKHQYSSITSEDDQNVEPSQVTFES-------------- 230

Query: 181 SPPIIGSEKRTGEHVPFEEEEEEEELVTSITKSENKVNRILDELLSANCEDLEGDRAINK 240
                                       SITKSENKVNRILDELLSANCEDLEGDRAINK
Sbjct: 231 ---------------------------ASITKSENKVNRILDELLSANCEDLEGDRAINK 290

Query: 241 LQECLQIKPINLEKLCLPDLQAIQTVNLKSSRGNAPKRSLISVDNQLQRIETSKFKQDDE 300
           LQECLQIKPINLEKLCLPDLQAIQTVNLKSSRGNAPKRSLISVDNQLQRIETSKFKQDDE
Sbjct: 291 LQECLQIKPINLEKLCLPDLQAIQTVNLKSSRGNAPKRSLISVDNQLQRIETSKFKQDDE 350

Query: 301 SSVHLLSTPSSMKSPLASVLALNRQILLSNSSSDPFSAHDIDKSPARNPSFSEHINHLSD 360
           SSVHLLSTPSSMKSPLASVLALNRQILLSNSSSDPFSAHDIDKSPARNPSFSEHINHLSD
Sbjct: 351 SSVHLLSTPSSMKSPLASVLALNRQILLSNSSSDPFSAHDIDKSPARNPSFSEHINHLSD 410

Query: 361 IVDIAKQSSVSKLKSPLTKDGEAVPNGIRSPKCPIGDVDSMSKISLANVLNVPEVGGNAA 420
           IVDIAKQSSVSKLKSPLTKDGEAVPNGIRSPKCPIGDVDSMSKISLANVLNVPEVGGNAA
Sbjct: 411 IVDIAKQSSVSKLKSPLTKDGEAVPNGIRSPKCPIGDVDSMSKISLANVLNVPEVGGNAA 470

Query: 421 LNGSHASMEAKEISGSDTEVEVNKKLSCLGAKADGLANASNALDDEVHFVVLVNKKLSCL 480
           LNGSHASMEAKEISGSDTEVEVNKKLSCLGAKADGLANASNALDDE              
Sbjct: 471 LNGSHASMEAKEISGSDTEVEVNKKLSCLGAKADGLANASNALDDE-------------- 530

Query: 481 GAKADGLANASNALDDEVHFMEDHDELASEQLNTSKVDATKEYPFGIQSQLDQSTATSTD 540
                               MEDHDELASEQLNTSKVDATKEYPFGIQSQLDQSTATSTD
Sbjct: 531 --------------------MEDHDELASEQLNTSKVDATKEYPFGIQSQLDQSTATSTD 590

Query: 541 NNVDGVSRSSGTDHHDKVKPKSHANKQRKDKNISRRQSLAGAGTKWESGVRRSTRFKTRP 600
           NNVDGVSRSSGTDHHDKVKPKSHANKQRKDKNISRRQSLAGAGTKWESGVRRSTRFKTRP
Sbjct: 591 NNVDGVSRSSGTDHHDKVKPKSHANKQRKDKNISRRQSLAGAGTKWESGVRRSTRFKTRP 633

Query: 601 LEYWKGERLLYGRVHQSLATVIGMKYVSPAKGNGQPTLKVKSLVSNKYKELVEFAALH 659
           LEYWKGERLLYGRVHQSLATVIGMKYVSPAKGNGQPTLKVKSLVSNKYKELVEFAALH
Sbjct: 651 LEYWKGERLLYGRVHQSLATVIGMKYVSPAKGNGQPTLKVKSLVSNKYKELVEFAALH 633

[Close]

BLAST of MS009459.1 vs. NCBI nr
Match: XP_023548004.1 (centromere protein C-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 864.0 bits (2231), Expect = 8.4e-247
Identity = 475/658 (72.19%), Postives = 534/658 (81.16%), Query Frame = 0


Query: 1   LNFQVSRSPSKLIEQARAILDGNSNVMHSEIATFLVHDDENKETTAKVEENPQERRPALN 60
           L   VSR+PSKLIEQAR+IL+ NSN+M S+ AT LV +++ +E  A VEENPQERRPALN
Sbjct: 51  LKSMVSRNPSKLIEQARSILNSNSNLMQSKAATLLVKNEKKEEAAANVEENPQERRPALN 110

Query: 61  RKRARFSLKPDTRQPAVNLEATFNIKQLKDPEEFFLAFERLENAKIEIQKQTGGVLKDLN 120
           RKRARFSLKPD RQP VNLE TF+IKQLKDPEEFFLA+ERLENAK EIQKQTG +LKDLN
Sbjct: 111 RKRARFSLKPDARQPPVNLEPTFDIKQLKDPEEFFLAYERLENAKKEIQKQTGAILKDLN 170

Query: 121 QQNPSTNTRHRRPGILGRSVRYKHQYSSITSEDDQNVEPSQVTFESGNISPSIMGTEKCP 180
           QQNPSTNTR RRPGILGRSVRYKHQYSSITSEDDQNVEPSQVTFESG+ISPSI+GTEK  
Sbjct: 171 QQNPSTNTRQRRPGILGRSVRYKHQYSSITSEDDQNVEPSQVTFESGSISPSILGTEKDA 230

Query: 181 SPPIIGSEKRTGEHVPFEEEEEEEELVTSITKSENKVNRILDELLSANCEDLEGDRAINK 240
           SPPII SE +T E VP  EEEEEE  V SIT +ENKVN+ILDELLSANCEDLEGDRAINK
Sbjct: 231 SPPIICSEMKTNEEVPL-EEEEEEAFVASITNAENKVNKILDELLSANCEDLEGDRAINK 290

Query: 241 LQECLQIKPINLEKLCLPDLQAIQTVNLKSSRGNAPKRSLISVDNQLQRIETSKFKQDDE 300
           LQECLQIKPINLEKLCLPDL+AIQT+NL+SSRGN P+RSLISVD+QLQRIE  K KQDDE
Sbjct: 291 LQECLQIKPINLEKLCLPDLEAIQTMNLRSSRGNLPERSLISVDSQLQRIENLKSKQDDE 350

Query: 301 SSVHLLSTPSSMKSPLASVLALNRQILLSNSSSDPFSAHDIDKSPARNPSFSEHINHLSD 360
           +SV+ +STP SM+SPLAS+ AL R+I LSNS  DPFSAHD+D+S ARNPS  E  NHLSD
Sbjct: 351 NSVNPISTPFSMRSPLASLSALTRRISLSNSPGDPFSAHDLDQSSARNPSLFELSNHLSD 410

Query: 361 IVDIAKQSSVSKLKSPLTKDGEAVPNGIRSPKCPIGDVDSMSKISLANVLNVPEVGGNAA 420
            V IA++  VS+L S LTKD   V  GI+SPK  +GDVDS+SKIS +NVLNVP+ G  AA
Sbjct: 411 AVGIAEKLGVSRLMSLLTKDDGTVAKGIKSPKILLGDVDSISKISSSNVLNVPQAGAEAA 470

Query: 421 LNGSHASMEAKEISGSDTEVEVNKKLSCLGAKADGLANASNALDDEVHFVVLVNKKLSCL 480
           L+ +HA+MEAK+ISGS TEVEVN+KLS L A+AD +A                       
Sbjct: 471 LSETHANMEAKDISGSSTEVEVNEKLSFLEAQADAVA----------------------- 530

Query: 481 GAKADGLANASNALDDEVHFMEDHDELASEQLNTSKVDATKEYPFGIQSQLDQSTATSTD 540
                    A+N LDDE   MEDH+   SEQ NTSKVDA KEYP G+Q+QLDQSTAT T+
Sbjct: 531 ---------ATNVLDDE---MEDHEGSTSEQPNTSKVDAIKEYPLGVQTQLDQSTATCTE 590

Query: 541 NNVDGVSRSSGTDHHDKVKPKSHANKQRKDKNISRRQSLAGAGTKWESGVRRSTRFKTRP 600
           N VDG SRSSGTD+HDKVK KS A  QR+ K +S R+SLAGAGT W+ GVRRSTRFKTRP
Sbjct: 591 NIVDGPSRSSGTDNHDKVKQKSRAGNQREGKRVSGRKSLAGAGTTWQGGVRRSTRFKTRP 650

Query: 601 LEYWKGERLLYGRVHQSLATVIGMKYVSPAKGNGQPTLKVKSLVSNKYKELVEFAALH 659
           LEYWKGERLLYGRVH+SLATVIG+KYVSPAKGNGQPTLKVKSLVS++Y ELVE AALH
Sbjct: 651 LEYWKGERLLYGRVHESLATVIGLKYVSPAKGNGQPTLKVKSLVSSEYNELVELAALH 672

[Close]

BLAST of MS009459.1 vs. NCBI nr
Match: XP_022953572.1 (centromere protein C isoform X1 [Cucurbita moschata])

HSP 1 Score: 859.0 bits (2218), Expect = 2.7e-245
Identity = 474/658 (72.04%), Postives = 532/658 (80.85%), Query Frame = 0


Query: 1   LNFQVSRSPSKLIEQARAILDGNSNVMHSEIATFLVHDDENKETTAKVEENPQERRPALN 60
           L   VSR+PSKLIEQAR+IL+GNSN+M S+ ATFLV +++ +E  A VEENPQERRPALN
Sbjct: 51  LKSMVSRNPSKLIEQARSILNGNSNLMQSKAATFLVKNEKKEEAAANVEENPQERRPALN 110

Query: 61  RKRARFSLKPDTRQPAVNLEATFNIKQLKDPEEFFLAFERLENAKIEIQKQTGGVLKDLN 120
           RKRARFSLKPD RQP+VNLE TF+IKQLKDPEEFFLA+ERLENAK EIQKQTG +LKDLN
Sbjct: 111 RKRARFSLKPDARQPSVNLEPTFDIKQLKDPEEFFLAYERLENAKKEIQKQTGAILKDLN 170

Query: 121 QQNPSTNTRHRRPGILGRSVRYKHQYSSITSEDDQNVEPSQVTFESGNISPSIMGTEKCP 180
           QQNPSTNTR RRPGILGRSVRYKHQYSSITSEDDQNVEPSQVTFESG+ISPSI+GTEK  
Sbjct: 171 QQNPSTNTRQRRPGILGRSVRYKHQYSSITSEDDQNVEPSQVTFESGSISPSILGTEKDA 230

Query: 181 SPPIIGSEKRTGEHVPFEEEEEEEELVTSITKSENKVNRILDELLSANCEDLEGDRAINK 240
           SPPII SE +T E VP   EEEEE  V SIT +ENKVN+ILDELLSANCEDLEGDRAINK
Sbjct: 231 SPPIICSEMKTNEEVPL--EEEEEAFVASITNAENKVNKILDELLSANCEDLEGDRAINK 290

Query: 241 LQECLQIKPINLEKLCLPDLQAIQTVNLKSSRGNAPKRSLISVDNQLQRIETSKFKQDDE 300
           LQECLQIKPINLEKLCLPDL+AIQT NL+SSRGN P+RSLISVD+QLQRIE  K KQDDE
Sbjct: 291 LQECLQIKPINLEKLCLPDLEAIQTTNLRSSRGNLPERSLISVDSQLQRIENLKSKQDDE 350

Query: 301 SSVHLLSTPSSMKSPLASVLALNRQILLSNSSSDPFSAHDIDKSPARNPSFSEHINHLSD 360
           +SV+ +STP SM+SPLAS+ AL R+I LSNS  DPFSAHD+D+S ARNPS  E  NHLSD
Sbjct: 351 NSVNPISTPFSMRSPLASLSALTRRISLSNSPGDPFSAHDLDQSSARNPSLFELSNHLSD 410

Query: 361 IVDIAKQSSVSKLKSPLTKDGEAVPNGIRSPKCPIGDVDSMSKISLANVLNVPEVGGNAA 420
            V IA++  VS+L S LTKD   V  GI+SPK  +GDVDS+SKIS +NVLNVP+ G  AA
Sbjct: 411 AVGIAEKLGVSRLMSLLTKDDGTVAKGIKSPKILLGDVDSISKISSSNVLNVPQAGAEAA 470

Query: 421 LNGSHASMEAKEISGSDTEVEVNKKLSCLGAKADGLANASNALDDEVHFVVLVNKKLSCL 480
           L+ + A+MEAK+ISGS TEVEVN+KLS L A+AD +A                       
Sbjct: 471 LSETRANMEAKDISGSSTEVEVNEKLSFLEAQADAVA----------------------- 530

Query: 481 GAKADGLANASNALDDEVHFMEDHDELASEQLNTSKVDATKEYPFGIQSQLDQSTATSTD 540
                    A+N LDDE   MEDH+   SEQ NTSKVDA KEYP GIQ+QLDQS AT T+
Sbjct: 531 ---------ATNVLDDE---MEDHEGSTSEQPNTSKVDAIKEYPIGIQTQLDQSIATCTE 590

Query: 541 NNVDGVSRSSGTDHHDKVKPKSHANKQRKDKNISRRQSLAGAGTKWESGVRRSTRFKTRP 600
           N VD  SRSSGTD+HDKVK KS A  QR+ K +S R+SLAGAGT W+ GVRRSTRFKTRP
Sbjct: 591 NIVDRPSRSSGTDNHDKVKQKSRAGNQREGKRVSGRKSLAGAGTTWQGGVRRSTRFKTRP 650

Query: 601 LEYWKGERLLYGRVHQSLATVIGMKYVSPAKGNGQPTLKVKSLVSNKYKELVEFAALH 659
           LEYWKGERLLYGRVH+SLATVIG+KYVSPAKGNGQPTLKVKSLVS++Y ELVE AALH
Sbjct: 651 LEYWKGERLLYGRVHESLATVIGLKYVSPAKGNGQPTLKVKSLVSSEYNELVELAALH 671

[Close]

BLAST of MS009459.1 vs. NCBI nr
Match: XP_022992183.1 (centromere protein C-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 859.0 bits (2218), Expect = 2.7e-245
Identity = 473/658 (71.88%), Postives = 534/658 (81.16%), Query Frame = 0


Query: 1   LNFQVSRSPSKLIEQARAILDGNSNVMHSEIATFLVHDDENKETTAKVEENPQERRPALN 60
           L   VSR+PSKLIEQAR+IL+GNSN+M S+ ATFLV +++ +E  A VEENPQERRPALN
Sbjct: 51  LKSMVSRNPSKLIEQARSILNGNSNLMQSKAATFLVKNEKKEEAAANVEENPQERRPALN 110

Query: 61  RKRARFSLKPDTRQPAVNLEATFNIKQLKDPEEFFLAFERLENAKIEIQKQTGGVLKDLN 120
           RKRARFSLKPD RQP VNLE TF+IKQLKDPEEFFLA+ERLENAK EIQKQTG +LKDLN
Sbjct: 111 RKRARFSLKPDARQPPVNLEPTFDIKQLKDPEEFFLAYERLENAKKEIQKQTGAILKDLN 170

Query: 121 QQNPSTNTRHRRPGILGRSVRYKHQYSSITSEDDQNVEPSQVTFESGNISPSIMGTEKCP 180
           QQNPSTNTR RRPGILGRSVRYKHQYSSITSEDDQ VEPSQVTFESG+ISPS +GTEK  
Sbjct: 171 QQNPSTNTRQRRPGILGRSVRYKHQYSSITSEDDQTVEPSQVTFESGSISPSTLGTEKDA 230

Query: 181 SPPIIGSEKRTGEHVPFEEEEEEEELVTSITKSENKVNRILDELLSANCEDLEGDRAINK 240
           SPPII SE +T E VPF EEEEEE  V SIT +ENKVN+ILDELLSANCEDLEGD+AINK
Sbjct: 231 SPPIICSEMKTNEEVPF-EEEEEEAFVASITNAENKVNKILDELLSANCEDLEGDQAINK 290

Query: 241 LQECLQIKPINLEKLCLPDLQAIQTVNLKSSRGNAPKRSLISVDNQLQRIETSKFKQDDE 300
           LQECLQIKPINLEKLCLPDL+AIQT+NL+SSRGN P+RSLISVD+QLQRIE  K KQDDE
Sbjct: 291 LQECLQIKPINLEKLCLPDLEAIQTMNLRSSRGNLPERSLISVDSQLQRIENLKSKQDDE 350

Query: 301 SSVHLLSTPSSMKSPLASVLALNRQILLSNSSSDPFSAHDIDKSPARNPSFSEHINHLSD 360
           +SV+ +STP SM+SPLAS+ AL R+I LSNS  DPFSAHD+D+S ARNPS  E  NHLSD
Sbjct: 351 NSVNPISTPFSMRSPLASLSALTRRISLSNSPGDPFSAHDLDQSSARNPSLFELSNHLSD 410

Query: 361 IVDIAKQSSVSKLKSPLTKDGEAVPNGIRSPKCPIGDVDSMSKISLANVLNVPEVGGNAA 420
            V IA++  VS+L S LTKD   V  GI+SPK  +GDV+S+SKIS +NVLNVP+ G +AA
Sbjct: 411 AVGIAEKLGVSRLMSLLTKDDGTVAKGIKSPKILLGDVNSISKISSSNVLNVPQAGADAA 470

Query: 421 LNGSHASMEAKEISGSDTEVEVNKKLSCLGAKADGLANASNALDDEVHFVVLVNKKLSCL 480
           L+ +HA+MEAK+ISGS  EVEVN+KLS L A+AD +A                       
Sbjct: 471 LSETHANMEAKDISGSSREVEVNEKLSFLEAQADAVA----------------------- 530

Query: 481 GAKADGLANASNALDDEVHFMEDHDELASEQLNTSKVDATKEYPFGIQSQLDQSTATSTD 540
                    A+N LDDE   MEDH+   SEQ NTSKVDA KEYP GIQ+ LDQSTAT T+
Sbjct: 531 ---------ATNVLDDE---MEDHEGSTSEQPNTSKVDAIKEYPIGIQTLLDQSTATCTE 590

Query: 541 NNVDGVSRSSGTDHHDKVKPKSHANKQRKDKNISRRQSLAGAGTKWESGVRRSTRFKTRP 600
           N VDG SRSSGTD+HDKVK KS A  QR+ K +S R+SLAGAGT W+ GVRRSTRFKTRP
Sbjct: 591 NIVDGPSRSSGTDNHDKVKQKSRAGNQREGKRVSGRKSLAGAGTTWQGGVRRSTRFKTRP 650

Query: 601 LEYWKGERLLYGRVHQSLATVIGMKYVSPAKGNGQPTLKVKSLVSNKYKELVEFAALH 659
           LEYWKGERLLYGRVH+SLATVIG+KYVSPAKGNGQPTLKVKSLVS++Y ELVE AALH
Sbjct: 651 LEYWKGERLLYGRVHESLATVIGLKYVSPAKGNGQPTLKVKSLVSSEYNELVELAALH 672

[Close]

BLAST of MS009459.1 vs. ExPASy Swiss-Prot
Match: Q66LG9 (Centromere protein C OS=Arabidopsis thaliana OX=3702 GN=CENPC PE=2 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 6.0e-46
Identity = 206/684 (30.12%), Postives = 312/684 (45.61%), Query Frame = 0


Query: 28  HSEIATFLVHDDENKETTAKVEENPQERRPALNRKRARFSLKPDTRQPAVNLEATFNIKQ 87
           H E A  ++ +D + +       N +ERRP L+RKR  FSL   T QP   +  +F+  +
Sbjct: 64  HQEQAKAIL-EDVDVDVQLNPIPNKRERRPGLDRKRKSFSLHLTTSQPP-PVAPSFDPSK 123

Query: 88  LKDPEEFFLAFERLENAKIEIQKQTGGVLKDLNQQNPSTNTRHRRPGILGRSVR-YKHQY 147
               E+FF A+++ E A  E QKQTG  + D+ +  PS   R RRPGI GR  R +K  +
Sbjct: 124 YPRSEDFFAAYDKFELANREWQKQTGSSVIDIQENPPS--RRPRRPGIPGRKRRPFKESF 183

Query: 148 SSITSEDDQNVEPSQVTFESGNISPSIMGTEKCPSPPIIGSEKRTGEHVPFEEEEEEEEL 207
           +     D  N+E S+               ++ P       E  T  HV   + E ++  
Sbjct: 184 TDSYFTDVINLEASE---------------KEIPIASEQSLESATAAHVTTVDREVDD-- 243

Query: 208 VTSITKSENKVNRILDELLSANCEDLEGDRAINKLQECLQIKPINLEKLCLPDLQAIQTV 267
             S   ++  +N +L +LL+ + E+LEGD AI  L+E LQIK  N+EK  +P+ Q ++ +
Sbjct: 244 --STVDTDKDLNNVLKDLLACSREELEGDGAIKLLEERLQIKSFNIEKFSIPEFQDVRKM 303

Query: 268 NLKSSRGNAPKR-SLISVDNQLQRIETSKFKQDDES-SVHLLSTPSSMKSPLASVLALNR 327
           NLK+S  N P R SL  + N L+       +++  S S   +   SS   P+      + 
Sbjct: 304 NLKASGSNPPNRKSLSDIQNILKGTNRVAVRKNSHSPSPQTIKHFSSPNPPVDQFSFPDI 363

Query: 328 QILL------SNSSSDPFSAHDIDKSPARNPSFSEHINHLSDIVDIAKQSSVSKL----- 387
             LL      S  +  P  A DI  +   N    +  +  +D V        S +     
Sbjct: 364 HNLLPGDQQPSEVNVQPI-AKDIPNTSPTNVGTVDVASPFNDSVVKRSGEDDSHIHSGIH 423

Query: 388 KSPLTKDGEAVPNGIRSPKCPIGDVDSMSKISLANVLNVPEVGGNAALNGSHASMEAKEI 447
           +S L++DG           C +  + + S   L   +++   G    +  S +    +  
Sbjct: 424 RSHLSRDG-------NPDICVMDSISNRSSAMLQKNVDMRTKGKEVDVPMSESGAN-RNT 483

Query: 448 SGSDTEVEVNKKLSCLGAKADGLANASNALDDEV--HFVVLVNKKLSCLGAKADGLANA- 507
              + + E+N+       + D L   +     EV   F V  +      GA +     A 
Sbjct: 484 GDRENDAEINE-------ETDNLERLAECASKEVTRPFTVEEDSIPYQQGASSKSPNRAP 543

Query: 508 ------SNALDDEVHFMEDHDELASEQLNTSKV------DATKEYPFGIQSQLDQSTATS 567
                   +L+   H    H+E   E +NT         +A + + +  +    +    S
Sbjct: 544 EQYNTMGGSLEHAEHNQGLHEE---ENVNTGSASGLQVENAPEVHKYSHKQTNKRRKRGS 603

Query: 568 TDNNVDGVSRS----SGTDHHDKVKP-KSHANKQRKDKNISR------------------ 627
           +D+NV   S++    +G D   K  P +S A KQ K K+  R                  
Sbjct: 604 SDSNVKKRSKTVHGETGGDKQMKTLPHESRAKKQTKGKSNEREEKKPKKTLTHEGKLFSC 663

Query: 628 RQSLAGAGTKWESGVRRSTRFKTRPLEYWKGERLLYGRVHQSLATVIGMKYVSPAKG-NG 659
           R+SLA AGTK E GVRRSTR K+RPLEYW+GER LYGR+H+SL TVIG+KY SP +G   
Sbjct: 664 RKSLAAAGTKIEGGVRRSTRIKSRPLEYWRGERFLYGRIHESLTTVIGIKYASPGEGKRD 705

[Close]

BLAST of MS009459.1 vs. ExPASy TrEMBL
Match: A0A6J1DKM1 (centromere protein C isoform X1 OS=Momordica charantia OX=3673 GN=LOC111021402 PE=3 SV=1)

HSP 1 Score: 1164.8 bits (3012), Expect = 0.0e+00
Identity = 620/658 (94.22%), Postives = 620/658 (94.22%), Query Frame = 0


Query: 1   LNFQVSRSPSKLIEQARAILDGNSNVMHSEIATFLVHDDENKETTAKVEENPQERRPALN 60
           L   VSRSPSKLIEQARAILDGNSNVMHSEIATFLVHDDENKETTAKVEENPQERRPALN
Sbjct: 51  LKSMVSRSPSKLIEQARAILDGNSNVMHSEIATFLVHDDENKETTAKVEENPQERRPALN 110

Query: 61  RKRARFSLKPDTRQPAVNLEATFNIKQLKDPEEFFLAFERLENAKIEIQKQTGGVLKDLN 120
           RKRARFSLKPDTRQPAVNLEATFNIKQLKDPEEFFLAFERLENAKIEIQKQT GVLKDLN
Sbjct: 111 RKRARFSLKPDTRQPAVNLEATFNIKQLKDPEEFFLAFERLENAKIEIQKQTRGVLKDLN 170

Query: 121 QQNPSTNTRHRRPGILGRSVRYKHQYSSITSEDDQNVEPSQVTFESGNISPSIMGTEKCP 180
           QQNPSTNTRHRRPGILGRSVRYKHQYSSITSEDDQNVEPSQVTFESGNISPSIMGTEKCP
Sbjct: 171 QQNPSTNTRHRRPGILGRSVRYKHQYSSITSEDDQNVEPSQVTFESGNISPSIMGTEKCP 230

Query: 181 SPPIIGSEKRTGEHVPFEEEEEEEELVTSITKSENKVNRILDELLSANCEDLEGDRAINK 240
           SPPIIGSEKRTGEHVPFEEEEEEEELVTSITKSENKVNRILDELLSANCEDLEGDRAINK
Sbjct: 231 SPPIIGSEKRTGEHVPFEEEEEEEELVTSITKSENKVNRILDELLSANCEDLEGDRAINK 290

Query: 241 LQECLQIKPINLEKLCLPDLQAIQTVNLKSSRGNAPKRSLISVDNQLQRIETSKFKQDDE 300
           LQECLQIKPINLEKLCLPDLQAIQTVNLKSSRGNAPKRSLISVDNQLQRIETSKFKQDDE
Sbjct: 291 LQECLQIKPINLEKLCLPDLQAIQTVNLKSSRGNAPKRSLISVDNQLQRIETSKFKQDDE 350

Query: 301 SSVHLLSTPSSMKSPLASVLALNRQILLSNSSSDPFSAHDIDKSPARNPSFSEHINHLSD 360
           SSVHLLSTPSSMKSPLASVLALNRQILLSNSSSDPFSAHDIDKSPARNPSFSEHINHLSD
Sbjct: 351 SSVHLLSTPSSMKSPLASVLALNRQILLSNSSSDPFSAHDIDKSPARNPSFSEHINHLSD 410

Query: 361 IVDIAKQSSVSKLKSPLTKDGEAVPNGIRSPKCPIGDVDSMSKISLANVLNVPEVGGNAA 420
           IVDIAKQSSVSKLKSPLTKDGEAVPNGIRSPKCPIGDVDSMSKISLANVLNVPEVGGNAA
Sbjct: 411 IVDIAKQSSVSKLKSPLTKDGEAVPNGIRSPKCPIGDVDSMSKISLANVLNVPEVGGNAA 470

Query: 421 LNGSHASMEAKEISGSDTEVEVNKKLSCLGAKADGLANASNALDDEVHFVVLVNKKLSCL 480
           LNGSHASMEAKEISGSDTEVEVNKKLSCLGAKADGLANASNALDDE              
Sbjct: 471 LNGSHASMEAKEISGSDTEVEVNKKLSCLGAKADGLANASNALDDE-------------- 530

Query: 481 GAKADGLANASNALDDEVHFMEDHDELASEQLNTSKVDATKEYPFGIQSQLDQSTATSTD 540
                               MEDHDELASEQLNTSKVDATKEYPFGIQSQLDQSTATSTD
Sbjct: 531 --------------------MEDHDELASEQLNTSKVDATKEYPFGIQSQLDQSTATSTD 590

Query: 541 NNVDGVSRSSGTDHHDKVKPKSHANKQRKDKNISRRQSLAGAGTKWESGVRRSTRFKTRP 600
           NNVDGVSRSSGTDHHDKVKPKSHANKQRKDKNISRRQSLAGAGTKWESGVRRSTRFKTRP
Sbjct: 591 NNVDGVSRSSGTDHHDKVKPKSHANKQRKDKNISRRQSLAGAGTKWESGVRRSTRFKTRP 650

Query: 601 LEYWKGERLLYGRVHQSLATVIGMKYVSPAKGNGQPTLKVKSLVSNKYKELVEFAALH 659
           LEYWKGERLLYGRVHQSLATVIGMKYVSPAKGNGQPTLKVKSLVSNKYKELVEFAALH
Sbjct: 651 LEYWKGERLLYGRVHQSLATVIGMKYVSPAKGNGQPTLKVKSLVSNKYKELVEFAALH 674

[Close]

BLAST of MS009459.1 vs. ExPASy TrEMBL
Match: A0A6J1DML8 (centromere protein C isoform X3 OS=Momordica charantia OX=3673 GN=LOC111021402 PE=3 SV=1)

HSP 1 Score: 1062.8 bits (2747), Expect = 6.0e-307
Identity = 578/658 (87.84%), Postives = 578/658 (87.84%), Query Frame = 0


Query: 1   LNFQVSRSPSKLIEQARAILDGNSNVMHSEIATFLVHDDENKETTAKVEENPQERRPALN 60
           L   VSRSPSKLIEQARAILDGNSNVMHSEIATFLVHDDENKETTAKVEENPQERRPALN
Sbjct: 51  LKSMVSRSPSKLIEQARAILDGNSNVMHSEIATFLVHDDENKETTAKVEENPQERRPALN 110

Query: 61  RKRARFSLKPDTRQPAVNLEATFNIKQLKDPEEFFLAFERLENAKIEIQKQTGGVLKDLN 120
           RKRARFSLKPDTRQPAVNLEATFNIKQLKDPEEFFLAFERLENAKIEIQKQT GVLKDLN
Sbjct: 111 RKRARFSLKPDTRQPAVNLEATFNIKQLKDPEEFFLAFERLENAKIEIQKQTRGVLKDLN 170

Query: 121 QQNPSTNTRHRRPGILGRSVRYKHQYSSITSEDDQNVEPSQVTFESGNISPSIMGTEKCP 180
           QQNPSTNTRHRRPGILGRSVRYKHQYSSITSEDDQNVEPSQVTFES              
Sbjct: 171 QQNPSTNTRHRRPGILGRSVRYKHQYSSITSEDDQNVEPSQVTFES-------------- 230

Query: 181 SPPIIGSEKRTGEHVPFEEEEEEEELVTSITKSENKVNRILDELLSANCEDLEGDRAINK 240
                                       SITKSENKVNRILDELLSANCEDLEGDRAINK
Sbjct: 231 ---------------------------ASITKSENKVNRILDELLSANCEDLEGDRAINK 290

Query: 241 LQECLQIKPINLEKLCLPDLQAIQTVNLKSSRGNAPKRSLISVDNQLQRIETSKFKQDDE 300
           LQECLQIKPINLEKLCLPDLQAIQTVNLKSSRGNAPKRSLISVDNQLQRIETSKFKQDDE
Sbjct: 291 LQECLQIKPINLEKLCLPDLQAIQTVNLKSSRGNAPKRSLISVDNQLQRIETSKFKQDDE 350

Query: 301 SSVHLLSTPSSMKSPLASVLALNRQILLSNSSSDPFSAHDIDKSPARNPSFSEHINHLSD 360
           SSVHLLSTPSSMKSPLASVLALNRQILLSNSSSDPFSAHDIDKSPARNPSFSEHINHLSD
Sbjct: 351 SSVHLLSTPSSMKSPLASVLALNRQILLSNSSSDPFSAHDIDKSPARNPSFSEHINHLSD 410

Query: 361 IVDIAKQSSVSKLKSPLTKDGEAVPNGIRSPKCPIGDVDSMSKISLANVLNVPEVGGNAA 420
           IVDIAKQSSVSKLKSPLTKDGEAVPNGIRSPKCPIGDVDSMSKISLANVLNVPEVGGNAA
Sbjct: 411 IVDIAKQSSVSKLKSPLTKDGEAVPNGIRSPKCPIGDVDSMSKISLANVLNVPEVGGNAA 470

Query: 421 LNGSHASMEAKEISGSDTEVEVNKKLSCLGAKADGLANASNALDDEVHFVVLVNKKLSCL 480
           LNGSHASMEAKEISGSDTEVEVNKKLSCLGAKADGLANASNALDDE              
Sbjct: 471 LNGSHASMEAKEISGSDTEVEVNKKLSCLGAKADGLANASNALDDE-------------- 530

Query: 481 GAKADGLANASNALDDEVHFMEDHDELASEQLNTSKVDATKEYPFGIQSQLDQSTATSTD 540
                               MEDHDELASEQLNTSKVDATKEYPFGIQSQLDQSTATSTD
Sbjct: 531 --------------------MEDHDELASEQLNTSKVDATKEYPFGIQSQLDQSTATSTD 590

Query: 541 NNVDGVSRSSGTDHHDKVKPKSHANKQRKDKNISRRQSLAGAGTKWESGVRRSTRFKTRP 600
           NNVDGVSRSSGTDHHDKVKPKSHANKQRKDKNISRRQSLAGAGTKWESGVRRSTRFKTRP
Sbjct: 591 NNVDGVSRSSGTDHHDKVKPKSHANKQRKDKNISRRQSLAGAGTKWESGVRRSTRFKTRP 633

Query: 601 LEYWKGERLLYGRVHQSLATVIGMKYVSPAKGNGQPTLKVKSLVSNKYKELVEFAALH 659
           LEYWKGERLLYGRVHQSLATVIGMKYVSPAKGNGQPTLKVKSLVSNKYKELVEFAALH
Sbjct: 651 LEYWKGERLLYGRVHQSLATVIGMKYVSPAKGNGQPTLKVKSLVSNKYKELVEFAALH 633

[Close]

BLAST of MS009459.1 vs. ExPASy TrEMBL
Match: A0A6J1JYG6 (centromere protein C-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111488588 PE=3 SV=1)

HSP 1 Score: 859.0 bits (2218), Expect = 1.3e-245
Identity = 473/658 (71.88%), Postives = 534/658 (81.16%), Query Frame = 0


Query: 1   LNFQVSRSPSKLIEQARAILDGNSNVMHSEIATFLVHDDENKETTAKVEENPQERRPALN 60
           L   VSR+PSKLIEQAR+IL+GNSN+M S+ ATFLV +++ +E  A VEENPQERRPALN
Sbjct: 51  LKSMVSRNPSKLIEQARSILNGNSNLMQSKAATFLVKNEKKEEAAANVEENPQERRPALN 110

Query: 61  RKRARFSLKPDTRQPAVNLEATFNIKQLKDPEEFFLAFERLENAKIEIQKQTGGVLKDLN 120
           RKRARFSLKPD RQP VNLE TF+IKQLKDPEEFFLA+ERLENAK EIQKQTG +LKDLN
Sbjct: 111 RKRARFSLKPDARQPPVNLEPTFDIKQLKDPEEFFLAYERLENAKKEIQKQTGAILKDLN 170

Query: 121 QQNPSTNTRHRRPGILGRSVRYKHQYSSITSEDDQNVEPSQVTFESGNISPSIMGTEKCP 180
           QQNPSTNTR RRPGILGRSVRYKHQYSSITSEDDQ VEPSQVTFESG+ISPS +GTEK  
Sbjct: 171 QQNPSTNTRQRRPGILGRSVRYKHQYSSITSEDDQTVEPSQVTFESGSISPSTLGTEKDA 230

Query: 181 SPPIIGSEKRTGEHVPFEEEEEEEELVTSITKSENKVNRILDELLSANCEDLEGDRAINK 240
           SPPII SE +T E VPF EEEEEE  V SIT +ENKVN+ILDELLSANCEDLEGD+AINK
Sbjct: 231 SPPIICSEMKTNEEVPF-EEEEEEAFVASITNAENKVNKILDELLSANCEDLEGDQAINK 290

Query: 241 LQECLQIKPINLEKLCLPDLQAIQTVNLKSSRGNAPKRSLISVDNQLQRIETSKFKQDDE 300
           LQECLQIKPINLEKLCLPDL+AIQT+NL+SSRGN P+RSLISVD+QLQRIE  K KQDDE
Sbjct: 291 LQECLQIKPINLEKLCLPDLEAIQTMNLRSSRGNLPERSLISVDSQLQRIENLKSKQDDE 350

Query: 301 SSVHLLSTPSSMKSPLASVLALNRQILLSNSSSDPFSAHDIDKSPARNPSFSEHINHLSD 360
           +SV+ +STP SM+SPLAS+ AL R+I LSNS  DPFSAHD+D+S ARNPS  E  NHLSD
Sbjct: 351 NSVNPISTPFSMRSPLASLSALTRRISLSNSPGDPFSAHDLDQSSARNPSLFELSNHLSD 410

Query: 361 IVDIAKQSSVSKLKSPLTKDGEAVPNGIRSPKCPIGDVDSMSKISLANVLNVPEVGGNAA 420
            V IA++  VS+L S LTKD   V  GI+SPK  +GDV+S+SKIS +NVLNVP+ G +AA
Sbjct: 411 AVGIAEKLGVSRLMSLLTKDDGTVAKGIKSPKILLGDVNSISKISSSNVLNVPQAGADAA 470

Query: 421 LNGSHASMEAKEISGSDTEVEVNKKLSCLGAKADGLANASNALDDEVHFVVLVNKKLSCL 480
           L+ +HA+MEAK+ISGS  EVEVN+KLS L A+AD +A                       
Sbjct: 471 LSETHANMEAKDISGSSREVEVNEKLSFLEAQADAVA----------------------- 530

Query: 481 GAKADGLANASNALDDEVHFMEDHDELASEQLNTSKVDATKEYPFGIQSQLDQSTATSTD 540
                    A+N LDDE   MEDH+   SEQ NTSKVDA KEYP GIQ+ LDQSTAT T+
Sbjct: 531 ---------ATNVLDDE---MEDHEGSTSEQPNTSKVDAIKEYPIGIQTLLDQSTATCTE 590

Query: 541 NNVDGVSRSSGTDHHDKVKPKSHANKQRKDKNISRRQSLAGAGTKWESGVRRSTRFKTRP 600
           N VDG SRSSGTD+HDKVK KS A  QR+ K +S R+SLAGAGT W+ GVRRSTRFKTRP
Sbjct: 591 NIVDGPSRSSGTDNHDKVKQKSRAGNQREGKRVSGRKSLAGAGTTWQGGVRRSTRFKTRP 650

Query: 601 LEYWKGERLLYGRVHQSLATVIGMKYVSPAKGNGQPTLKVKSLVSNKYKELVEFAALH 659
           LEYWKGERLLYGRVH+SLATVIG+KYVSPAKGNGQPTLKVKSLVS++Y ELVE AALH
Sbjct: 651 LEYWKGERLLYGRVHESLATVIGLKYVSPAKGNGQPTLKVKSLVSSEYNELVELAALH 672

[Close]

BLAST of MS009459.1 vs. ExPASy TrEMBL
Match: A0A6J1GNL2 (centromere protein C isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111456073 PE=3 SV=1)

HSP 1 Score: 859.0 bits (2218), Expect = 1.3e-245
Identity = 474/658 (72.04%), Postives = 532/658 (80.85%), Query Frame = 0


Query: 1   LNFQVSRSPSKLIEQARAILDGNSNVMHSEIATFLVHDDENKETTAKVEENPQERRPALN 60
           L   VSR+PSKLIEQAR+IL+GNSN+M S+ ATFLV +++ +E  A VEENPQERRPALN
Sbjct: 51  LKSMVSRNPSKLIEQARSILNGNSNLMQSKAATFLVKNEKKEEAAANVEENPQERRPALN 110

Query: 61  RKRARFSLKPDTRQPAVNLEATFNIKQLKDPEEFFLAFERLENAKIEIQKQTGGVLKDLN 120
           RKRARFSLKPD RQP+VNLE TF+IKQLKDPEEFFLA+ERLENAK EIQKQTG +LKDLN
Sbjct: 111 RKRARFSLKPDARQPSVNLEPTFDIKQLKDPEEFFLAYERLENAKKEIQKQTGAILKDLN 170

Query: 121 QQNPSTNTRHRRPGILGRSVRYKHQYSSITSEDDQNVEPSQVTFESGNISPSIMGTEKCP 180
           QQNPSTNTR RRPGILGRSVRYKHQYSSITSEDDQNVEPSQVTFESG+ISPSI+GTEK  
Sbjct: 171 QQNPSTNTRQRRPGILGRSVRYKHQYSSITSEDDQNVEPSQVTFESGSISPSILGTEKDA 230

Query: 181 SPPIIGSEKRTGEHVPFEEEEEEEELVTSITKSENKVNRILDELLSANCEDLEGDRAINK 240
           SPPII SE +T E VP   EEEEE  V SIT +ENKVN+ILDELLSANCEDLEGDRAINK
Sbjct: 231 SPPIICSEMKTNEEVPL--EEEEEAFVASITNAENKVNKILDELLSANCEDLEGDRAINK 290

Query: 241 LQECLQIKPINLEKLCLPDLQAIQTVNLKSSRGNAPKRSLISVDNQLQRIETSKFKQDDE 300
           LQECLQIKPINLEKLCLPDL+AIQT NL+SSRGN P+RSLISVD+QLQRIE  K KQDDE
Sbjct: 291 LQECLQIKPINLEKLCLPDLEAIQTTNLRSSRGNLPERSLISVDSQLQRIENLKSKQDDE 350

Query: 301 SSVHLLSTPSSMKSPLASVLALNRQILLSNSSSDPFSAHDIDKSPARNPSFSEHINHLSD 360
           +SV+ +STP SM+SPLAS+ AL R+I LSNS  DPFSAHD+D+S ARNPS  E  NHLSD
Sbjct: 351 NSVNPISTPFSMRSPLASLSALTRRISLSNSPGDPFSAHDLDQSSARNPSLFELSNHLSD 410

Query: 361 IVDIAKQSSVSKLKSPLTKDGEAVPNGIRSPKCPIGDVDSMSKISLANVLNVPEVGGNAA 420
            V IA++  VS+L S LTKD   V  GI+SPK  +GDVDS+SKIS +NVLNVP+ G  AA
Sbjct: 411 AVGIAEKLGVSRLMSLLTKDDGTVAKGIKSPKILLGDVDSISKISSSNVLNVPQAGAEAA 470

Query: 421 LNGSHASMEAKEISGSDTEVEVNKKLSCLGAKADGLANASNALDDEVHFVVLVNKKLSCL 480
           L+ + A+MEAK+ISGS TEVEVN+KLS L A+AD +A                       
Sbjct: 471 LSETRANMEAKDISGSSTEVEVNEKLSFLEAQADAVA----------------------- 530

Query: 481 GAKADGLANASNALDDEVHFMEDHDELASEQLNTSKVDATKEYPFGIQSQLDQSTATSTD 540
                    A+N LDDE   MEDH+   SEQ NTSKVDA KEYP GIQ+QLDQS AT T+
Sbjct: 531 ---------ATNVLDDE---MEDHEGSTSEQPNTSKVDAIKEYPIGIQTQLDQSIATCTE 590

Query: 541 NNVDGVSRSSGTDHHDKVKPKSHANKQRKDKNISRRQSLAGAGTKWESGVRRSTRFKTRP 600
           N VD  SRSSGTD+HDKVK KS A  QR+ K +S R+SLAGAGT W+ GVRRSTRFKTRP
Sbjct: 591 NIVDRPSRSSGTDNHDKVKQKSRAGNQREGKRVSGRKSLAGAGTTWQGGVRRSTRFKTRP 650

Query: 601 LEYWKGERLLYGRVHQSLATVIGMKYVSPAKGNGQPTLKVKSLVSNKYKELVEFAALH 659
           LEYWKGERLLYGRVH+SLATVIG+KYVSPAKGNGQPTLKVKSLVS++Y ELVE AALH
Sbjct: 651 LEYWKGERLLYGRVHESLATVIGLKYVSPAKGNGQPTLKVKSLVSSEYNELVELAALH 671

[Close]

BLAST of MS009459.1 vs. ExPASy TrEMBL
Match: A0A1S3CDU5 (uncharacterized protein LOC103499749 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103499749 PE=3 SV=1)

HSP 1 Score: 820.1 bits (2117), Expect = 6.7e-234
Identity = 459/678 (67.70%), Postives = 531/678 (78.32%), Query Frame = 0


Query: 1   LNFQVSRSPSKLIEQARAILDGNSNVMHSEIATFLVHDDENKETTAKVEENPQERRPALN 60
           L   V RSPSKL+EQAR+ILDGNS  M SE ATFLV +++N+  + K EENPQERRPALN
Sbjct: 53  LKSMVLRSPSKLLEQARSILDGNSKSMISEAATFLVKNEKNEAASVKAEENPQERRPALN 112

Query: 61  RKRARFSLKPDTRQPAVNLEATFNIKQLKDPEEFFLAFERLENAKIEIQKQTGGVLKDLN 120
           RKRARFSLKPD  QP VNLE TF+IKQLKDPEEFFLA+E+ ENAK EIQKQ G VLKDLN
Sbjct: 113 RKRARFSLKPDAGQPPVNLEPTFDIKQLKDPEEFFLAYEKHENAKKEIQKQMGAVLKDLN 172

Query: 121 QQNPSTNTRHRRPGILGRSVRYKHQYSSITSEDDQNVEPSQVTFESGNISPSIMGTEKCP 180
           QQNPSTNTR RRPGILGRSVRYKHQYSSIT+EDDQNV+PSQVTF+SG  SP  +GTE  P
Sbjct: 173 QQNPSTNTRQRRPGILGRSVRYKHQYSSITTEDDQNVDPSQVTFDSGVFSPLKLGTETHP 232

Query: 181 SPPIIGSEKRTGEHVPFEEEEEEEELVTSITKSENKVNRILDELLSANCEDLEGDRAINK 240
           SP II SEK+T E V FEEEEEEEELV S TK+EN+VN ILDE LS NCEDLEGDRAIN 
Sbjct: 233 SPHIIDSEKKTDEDVAFEEEEEEEELVASATKAENRVNDILDEFLSGNCEDLEGDRAINI 292

Query: 241 LQECLQIKPINLEKLCLPDLQAIQTVNLKSSRGNAPKRSLISVDNQLQRIETSKFKQDDE 300
           LQE LQIKP+ LEKLCLPDL+AI T+NLKS+RGN  KRSLISVDNQLQ+ ET K K+D+E
Sbjct: 293 LQERLQIKPLTLEKLCLPDLEAIPTMNLKSTRGNLSKRSLISVDNQLQKTETLKSKEDNE 352

Query: 301 SSVHLLSTPSSMKSPLASVLALNRQILLSNSSSDPFSAHDIDKSPARNPSFSEHINHLSD 360
           + V+L+STPSSM+SPLAS+ ALNR+I LSNSS D FSAH ID+SPAR+P   E  NHLSD
Sbjct: 353 NLVNLVSTPSSMRSPLASLSALNRRISLSNSSGDSFSAHGIDRSPARDPYLFELGNHLSD 412

Query: 361 IVDIAKQSSVSKLKSPLTKDGEAVPNGIRSPKCPIGDVDSMSKISLANVLNVPEVGGNAA 420
            V I + SSVSKLK  LT+DG  + NGI+  K   GD DSMSKIS +N+LNV +VG N A
Sbjct: 413 AVGITEHSSVSKLKPLLTRDGGTIANGIQPSKILSGD-DSMSKISSSNILNVLQVGSNTA 472

Query: 421 LNGSHASMEAKEISGSDTEVEVNKKLSCLGAKADGLANAS-------------NALDDEV 480
           L+G++AS +AK +SGS T+VE+N+KLSCL A+AD +AN               + +D   
Sbjct: 473 LSGTYASTDAKNVSGSSTDVEINEKLSCLEAQADVVANMQIDHQGSASEQPKLSEVDLIE 532

Query: 481 HFVVLVNKKL-----SCLGAKADGLANASNALDDEVHFMEDHDELASEQLNTSKVDATKE 540
            + V +  +L     +C     DG + +S    +    MEDH+  ASEQ N+SKVD  KE
Sbjct: 533 EYPVGIRSQLDQSAATCTENIVDGSSRSSGT--EHHDEMEDHEGSASEQPNSSKVDMIKE 592

Query: 541 YPFGIQSQLDQSTATST--DNNVDGVSRSSGTDHHDKVKPKSHANKQRKDKNISRRQSLA 600
           YP GIQ QLDQST T+T  +  VDG SRSSGTDHHD+VKPKS ANKQRK K IS RQSLA
Sbjct: 593 YPVGIQIQLDQSTTTTTCAEKIVDGTSRSSGTDHHDEVKPKSRANKQRKGKKISGRQSLA 652

Query: 601 GAGTKWESGVRRSTRFKTRPLEYWKGERLLYGRVHQSLATVIGMKYVSPAKGNGQPTLKV 659
           GAGT W+SGVRRSTRFK RPLEYWKGER+LYGRVH+SLATVIG+KYVSP KGNG+PT+KV
Sbjct: 653 GAGTTWKSGVRRSTRFKIRPLEYWKGERMLYGRVHESLATVIGLKYVSPEKGNGKPTMKV 712

[Close]

BLAST of MS009459.1 vs. TAIR 10
Match: AT1G15660.1 (centromere protein C )

HSP 1 Score: 187.2 bits (474), Expect = 4.3e-47
Identity = 206/684 (30.12%), Postives = 312/684 (45.61%), Query Frame = 0


Query: 28  HSEIATFLVHDDENKETTAKVEENPQERRPALNRKRARFSLKPDTRQPAVNLEATFNIKQ 87
           H E A  ++ +D + +       N +ERRP L+RKR  FSL   T QP   +  +F+  +
Sbjct: 64  HQEQAKAIL-EDVDVDVQLNPIPNKRERRPGLDRKRKSFSLHLTTSQPP-PVAPSFDPSK 123

Query: 88  LKDPEEFFLAFERLENAKIEIQKQTGGVLKDLNQQNPSTNTRHRRPGILGRSVR-YKHQY 147
               E+FF A+++ E A  E QKQTG  + D+ +  PS   R RRPGI GR  R +K  +
Sbjct: 124 YPRSEDFFAAYDKFELANREWQKQTGSSVIDIQENPPS--RRPRRPGIPGRKRRPFKESF 183

Query: 148 SSITSEDDQNVEPSQVTFESGNISPSIMGTEKCPSPPIIGSEKRTGEHVPFEEEEEEEEL 207
           +     D  N+E S+               ++ P       E  T  HV   + E ++  
Sbjct: 184 TDSYFTDVINLEASE---------------KEIPIASEQSLESATAAHVTTVDREVDD-- 243

Query: 208 VTSITKSENKVNRILDELLSANCEDLEGDRAINKLQECLQIKPINLEKLCLPDLQAIQTV 267
             S   ++  +N +L +LL+ + E+LEGD AI  L+E LQIK  N+EK  +P+ Q ++ +
Sbjct: 244 --STVDTDKDLNNVLKDLLACSREELEGDGAIKLLEERLQIKSFNIEKFSIPEFQDVRKM 303

Query: 268 NLKSSRGNAPKR-SLISVDNQLQRIETSKFKQDDES-SVHLLSTPSSMKSPLASVLALNR 327
           NLK+S  N P R SL  + N L+       +++  S S   +   SS   P+      + 
Sbjct: 304 NLKASGSNPPNRKSLSDIQNILKGTNRVAVRKNSHSPSPQTIKHFSSPNPPVDQFSFPDI 363

Query: 328 QILL------SNSSSDPFSAHDIDKSPARNPSFSEHINHLSDIVDIAKQSSVSKL----- 387
             LL      S  +  P  A DI  +   N    +  +  +D V        S +     
Sbjct: 364 HNLLPGDQQPSEVNVQPI-AKDIPNTSPTNVGTVDVASPFNDSVVKRSGEDDSHIHSGIH 423

Query: 388 KSPLTKDGEAVPNGIRSPKCPIGDVDSMSKISLANVLNVPEVGGNAALNGSHASMEAKEI 447
           +S L++DG           C +  + + S   L   +++   G    +  S +    +  
Sbjct: 424 RSHLSRDG-------NPDICVMDSISNRSSAMLQKNVDMRTKGKEVDVPMSESGAN-RNT 483

Query: 448 SGSDTEVEVNKKLSCLGAKADGLANASNALDDEV--HFVVLVNKKLSCLGAKADGLANA- 507
              + + E+N+       + D L   +     EV   F V  +      GA +     A 
Sbjct: 484 GDRENDAEINE-------ETDNLERLAECASKEVTRPFTVEEDSIPYQQGASSKSPNRAP 543

Query: 508 ------SNALDDEVHFMEDHDELASEQLNTSKV------DATKEYPFGIQSQLDQSTATS 567
                   +L+   H    H+E   E +NT         +A + + +  +    +    S
Sbjct: 544 EQYNTMGGSLEHAEHNQGLHEE---ENVNTGSASGLQVENAPEVHKYSHKQTNKRRKRGS 603

Query: 568 TDNNVDGVSRS----SGTDHHDKVKP-KSHANKQRKDKNISR------------------ 627
           +D+NV   S++    +G D   K  P +S A KQ K K+  R                  
Sbjct: 604 SDSNVKKRSKTVHGETGGDKQMKTLPHESRAKKQTKGKSNEREEKKPKKTLTHEGKLFSC 663

Query: 628 RQSLAGAGTKWESGVRRSTRFKTRPLEYWKGERLLYGRVHQSLATVIGMKYVSPAKG-NG 659
           R+SLA AGTK E GVRRSTR K+RPLEYW+GER LYGR+H+SL TVIG+KY SP +G   
Sbjct: 664 RKSLAAAGTKIEGGVRRSTRIKSRPLEYWRGERFLYGRIHESLTTVIGIKYASPGEGKRD 705

The following BLAST results are available for this feature:

BLAST of MS009459.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022154052.1	0.0e+00	94.22	centromere protein C isoform X1 [Momordica charantia] >XP_022154062.1 centromere...	[more]
XP_022154071.1	1.2e-306	87.84	centromere protein C isoform X3 [Momordica charantia]	[more]
XP_023548004.1	8.4e-247	72.19	centromere protein C-like isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_022953572.1	2.7e-245	72.04	centromere protein C isoform X1 [Cucurbita moschata]	[more]
XP_022992183.1	2.7e-245	71.88	centromere protein C-like isoform X1 [Cucurbita maxima]	[more]

BLAST of MS009459.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q66LG9	6.0e-46	30.12	Centromere protein C OS=Arabidopsis thaliana OX=3702 GN=CENPC PE=2 SV=1	[more]

BLAST of MS009459.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DKM1	0.0e+00	94.22	centromere protein C isoform X1 OS=Momordica charantia OX=3673 GN=LOC111021402 P...	[more]
A0A6J1DML8	6.0e-307	87.84	centromere protein C isoform X3 OS=Momordica charantia OX=3673 GN=LOC111021402 P...	[more]
A0A6J1JYG6	1.3e-245	71.88	centromere protein C-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111488588...	[more]
A0A6J1GNL2	1.3e-245	72.04	centromere protein C isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111456073 PE...	[more]
A0A1S3CDU5	6.7e-234	67.70	uncharacterized protein LOC103499749 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]

BLAST of MS009459.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G15660.1	4.3e-47	30.12	centromere protein C	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 528..548
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 147..175
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 147..198
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 528..591
IPR028386	Centromere protein C/Mif2/cnp3	PANTHER	PTHR16684	CENTROMERE PROTEIN C	coord: 5..657

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MS009459	MS009459	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MS009459.1-cds	MS009459.1-cds-scaffold813:1449266..1449483	CDS
MS009459.1-cds	MS009459.1-cds-scaffold813:1449565..1449653	CDS
MS009459.1-cds	MS009459.1-cds-scaffold813:1449743..1449845	CDS
MS009459.1-cds	MS009459.1-cds-scaffold813:1449946..1450157	CDS
MS009459.1-cds	MS009459.1-cds-scaffold813:1450339..1451216	CDS
MS009459.1-cds	MS009459.1-cds-scaffold813:1451304..1451397	CDS
MS009459.1-cds	MS009459.1-cds-scaffold813:1451910..1451986	CDS
MS009459.1-cds	MS009459.1-cds-scaffold813:1452607..1452676	CDS
MS009459.1-cds	MS009459.1-cds-scaffold813:1452769..1452876	CDS
MS009459.1-cds	MS009459.1-cds-scaffold813:1453161..1453285	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MS009459.1	MS009459.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051382	kinetochore assembly
cellular_component	GO:0000776	kinetochore
molecular_function	GO:0019237	centromeric DNA binding