Homology
BLAST of MS004619 vs. NCBI nr
Match:
XP_022136031.1 (serine/arginine-rich splicing factor SR45 isoform X2 [Momordica charantia])
HSP 1 Score: 429.9 bits (1104), Expect = 1.4e-116
Identity = 227/228 (99.56%), Postives = 228/228 (100.00%), Query Frame = 0
Query: 1 RKPSPVRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRTVNLPKGYGYVEFKT 60
RKPSPVRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRTVNLPKGYGYVEFKT
Sbjct: 102 RKPSPVRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRTVNLPKGYGYVEFKT 161
Query: 61 RPDAEKAQVYMDGAQIDGNVIRVRFTLPQRQKMPTPPRTVAIAPKRDGPKPENVGADAEK 120
RPDAEKAQVYMDGAQIDGNVIRVRFTLPQRQKMPTPPRTVAIAPKRDGPKPENVGA+AEK
Sbjct: 162 RPDAEKAQVYMDGAQIDGNVIRVRFTLPQRQKMPTPPRTVAIAPKRDGPKPENVGANAEK 221
Query: 121 DDMKRQREPSPRRKPPSPRRRSPVARRGGSPPRRQPDSPRRRPESPPRRRVESPFRRDSP 180
DDMKRQREPSPRRKPPSPRRRSPVARRGGSPPRRQPDSPRRRPESPPRRRVESPFRRDSP
Sbjct: 222 DDMKRQREPSPRRKPPSPRRRSPVARRGGSPPRRQPDSPRRRPESPPRRRVESPFRRDSP 281
Query: 181 PRRRPASPIRGRSPSPLPRRHRSPPRPSPRRIRGSPVRRRSPPPPRRR 229
PRRRPASPIRGRSPSPLPRRHRSPPRPSPRRIRGSPVRRRSPPPPRRR
Sbjct: 282 PRRRPASPIRGRSPSPLPRRHRSPPRPSPRRIRGSPVRRRSPPPPRRR 329
BLAST of MS004619 vs. NCBI nr
Match:
XP_022136021.1 (serine/arginine-rich splicing factor SR45 isoform X1 [Momordica charantia])
HSP 1 Score: 423.7 bits (1088), Expect = 1.0e-114
Identity = 227/233 (97.42%), Postives = 228/233 (97.85%), Query Frame = 0
Query: 1 RKPSPVRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRT-----VNLPKGYGY 60
RKPSPVRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRT VNLPKGYGY
Sbjct: 102 RKPSPVRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRTVSLHHVNLPKGYGY 161
Query: 61 VEFKTRPDAEKAQVYMDGAQIDGNVIRVRFTLPQRQKMPTPPRTVAIAPKRDGPKPENVG 120
VEFKTRPDAEKAQVYMDGAQIDGNVIRVRFTLPQRQKMPTPPRTVAIAPKRDGPKPENVG
Sbjct: 162 VEFKTRPDAEKAQVYMDGAQIDGNVIRVRFTLPQRQKMPTPPRTVAIAPKRDGPKPENVG 221
Query: 121 ADAEKDDMKRQREPSPRRKPPSPRRRSPVARRGGSPPRRQPDSPRRRPESPPRRRVESPF 180
A+AEKDDMKRQREPSPRRKPPSPRRRSPVARRGGSPPRRQPDSPRRRPESPPRRRVESPF
Sbjct: 222 ANAEKDDMKRQREPSPRRKPPSPRRRSPVARRGGSPPRRQPDSPRRRPESPPRRRVESPF 281
Query: 181 RRDSPPRRRPASPIRGRSPSPLPRRHRSPPRPSPRRIRGSPVRRRSPPPPRRR 229
RRDSPPRRRPASPIRGRSPSPLPRRHRSPPRPSPRRIRGSPVRRRSPPPPRRR
Sbjct: 282 RRDSPPRRRPASPIRGRSPSPLPRRHRSPPRPSPRRIRGSPVRRRSPPPPRRR 334
BLAST of MS004619 vs. NCBI nr
Match:
XP_022136048.1 (serine/arginine-rich splicing factor SR45 isoform X4 [Momordica charantia])
HSP 1 Score: 423.7 bits (1088), Expect = 1.0e-114
Identity = 227/233 (97.42%), Postives = 228/233 (97.85%), Query Frame = 0
Query: 1 RKPSPVRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRT-----VNLPKGYGY 60
RKPSPVRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRT VNLPKGYGY
Sbjct: 77 RKPSPVRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRTVSLHHVNLPKGYGY 136
Query: 61 VEFKTRPDAEKAQVYMDGAQIDGNVIRVRFTLPQRQKMPTPPRTVAIAPKRDGPKPENVG 120
VEFKTRPDAEKAQVYMDGAQIDGNVIRVRFTLPQRQKMPTPPRTVAIAPKRDGPKPENVG
Sbjct: 137 VEFKTRPDAEKAQVYMDGAQIDGNVIRVRFTLPQRQKMPTPPRTVAIAPKRDGPKPENVG 196
Query: 121 ADAEKDDMKRQREPSPRRKPPSPRRRSPVARRGGSPPRRQPDSPRRRPESPPRRRVESPF 180
A+AEKDDMKRQREPSPRRKPPSPRRRSPVARRGGSPPRRQPDSPRRRPESPPRRRVESPF
Sbjct: 197 ANAEKDDMKRQREPSPRRKPPSPRRRSPVARRGGSPPRRQPDSPRRRPESPPRRRVESPF 256
Query: 181 RRDSPPRRRPASPIRGRSPSPLPRRHRSPPRPSPRRIRGSPVRRRSPPPPRRR 229
RRDSPPRRRPASPIRGRSPSPLPRRHRSPPRPSPRRIRGSPVRRRSPPPPRRR
Sbjct: 257 RRDSPPRRRPASPIRGRSPSPLPRRHRSPPRPSPRRIRGSPVRRRSPPPPRRR 309
BLAST of MS004619 vs. NCBI nr
Match:
XP_022136040.1 (serine/arginine-rich splicing factor SR45 isoform X3 [Momordica charantia])
HSP 1 Score: 423.7 bits (1088), Expect = 1.0e-114
Identity = 227/233 (97.42%), Postives = 228/233 (97.85%), Query Frame = 0
Query: 1 RKPSPVRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRT-----VNLPKGYGY 60
RKPSPVRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRT VNLPKGYGY
Sbjct: 79 RKPSPVRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRTVSLHHVNLPKGYGY 138
Query: 61 VEFKTRPDAEKAQVYMDGAQIDGNVIRVRFTLPQRQKMPTPPRTVAIAPKRDGPKPENVG 120
VEFKTRPDAEKAQVYMDGAQIDGNVIRVRFTLPQRQKMPTPPRTVAIAPKRDGPKPENVG
Sbjct: 139 VEFKTRPDAEKAQVYMDGAQIDGNVIRVRFTLPQRQKMPTPPRTVAIAPKRDGPKPENVG 198
Query: 121 ADAEKDDMKRQREPSPRRKPPSPRRRSPVARRGGSPPRRQPDSPRRRPESPPRRRVESPF 180
A+AEKDDMKRQREPSPRRKPPSPRRRSPVARRGGSPPRRQPDSPRRRPESPPRRRVESPF
Sbjct: 199 ANAEKDDMKRQREPSPRRKPPSPRRRSPVARRGGSPPRRQPDSPRRRPESPPRRRVESPF 258
Query: 181 RRDSPPRRRPASPIRGRSPSPLPRRHRSPPRPSPRRIRGSPVRRRSPPPPRRR 229
RRDSPPRRRPASPIRGRSPSPLPRRHRSPPRPSPRRIRGSPVRRRSPPPPRRR
Sbjct: 259 RRDSPPRRRPASPIRGRSPSPLPRRHRSPPRPSPRRIRGSPVRRRSPPPPRRR 311
BLAST of MS004619 vs. NCBI nr
Match:
XP_031740559.1 (serine/arginine-rich splicing factor SR45 [Cucumis sativus] >KAE8649784.1 hypothetical protein Csa_012847 [Cucumis sativus])
HSP 1 Score: 396.4 bits (1017), Expect = 1.7e-106
Identity = 217/230 (94.35%), Postives = 220/230 (95.65%), Query Frame = 0
Query: 1 RKPSPVRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRTVNLPKGYGYVEFKT 60
RKPSPVRESLVLHIDALSRNVHEGHLREIF NFGEVVNVELAMDRTVNLPKGYGYVEFKT
Sbjct: 98 RKPSPVRESLVLHIDALSRNVHEGHLREIFSNFGEVVNVELAMDRTVNLPKGYGYVEFKT 157
Query: 61 RPDAEKAQVYMDGAQIDGNVIRVRFTLPQRQKMPTPPRTVAIAPKRDGPKPENVGADAEK 120
R DAEKAQVYMDGAQIDGNVIR RFTLPQRQKMPTPPRTVA PKRDGPKPENVG DAEK
Sbjct: 158 RSDAEKAQVYMDGAQIDGNVIRARFTLPQRQKMPTPPRTVATVPKRDGPKPENVGPDAEK 217
Query: 121 DDMKRQREPSPRRKPPSPRRRSPVARRGGSPPRRQPDSPRRRPESPPRRRVESPFRRDS- 180
DDMKRQREPSPRRKPPSPRRRSPVARRGGS PRRQPDSPRRRP+SPPRRR+ESPFRRDS
Sbjct: 218 DDMKRQREPSPRRKPPSPRRRSPVARRGGS-PRRQPDSPRRRPDSPPRRRIESPFRRDSP 277
Query: 181 PPRRRPASPIR-GRSPSPLPRRHRSPPRPSPRRIRGSPVRRRSPPPPRRR 229
PPRRRPASP+R GRSPSPL RRHRSPPRPSPRRIRGSPVRRRSPPPPRRR
Sbjct: 278 PPRRRPASPMRGGRSPSPLARRHRSPPRPSPRRIRGSPVRRRSPPPPRRR 326
BLAST of MS004619 vs. ExPASy Swiss-Prot
Match:
Q9SEE9 (Serine/arginine-rich splicing factor SR45 OS=Arabidopsis thaliana OX=3702 GN=SR45 PE=1 SV=1)
HSP 1 Score: 261.9 bits (668), Expect = 6.6e-69
Identity = 160/227 (70.48%), Postives = 183/227 (80.62%), Query Frame = 0
Query: 6 VRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRTVNLPKGYGYVEFKTRPDAE 65
V+ESLVLH+D+LSRNV+E HL+EIF NFGEV++VE+AMDR VNLP+G+GYVEFK R DAE
Sbjct: 94 VQESLVLHVDSLSRNVNEAHLKEIFGNFGEVIHVEIAMDRAVNLPRGHGYVEFKARADAE 153
Query: 66 KAQVYMDGAQIDGNVIRVRFTLPQRQKMPTPPRTVAIAPKRDGPKPENVGADAEKD-DMK 125
KAQ+YMDGAQIDG V++ FTLP RQK+ +PP+ V+ APKRD PK +N ADAEKD +
Sbjct: 154 KAQLYMDGAQIDGKVVKATFTLPPRQKVSSPPKPVSAAPKRDAPKSDNAAADAEKDGGPR 213
Query: 126 RQREPSPRRKPP-SPRRRSPVARRGGSPPRRQPDSP-RRRPESPPRRRVESPFRRDSPPR 185
R RE SP+RK SPRRRSP+ RRG SP RR PDSP RRRP SP RR R D+PPR
Sbjct: 214 RPRETSPQRKTGLSPRRRSPLPRRGLSPRRRSPDSPHRRRPGSPIRR------RGDTPPR 273
Query: 186 RRPASPIRGRSP-SPLPRRHRSPPRPSPRRIRGSPVRRRSPPPPRRR 229
RRPASP RGRSP SP PRR+RSPPR SPRRIRGSPVRRRSP P RRR
Sbjct: 274 RRPASPSRGRSPSSPPPRRYRSPPRGSPRRIRGSPVRRRSPLPLRRR 314
BLAST of MS004619 vs. ExPASy Swiss-Prot
Match:
Q15287 (RNA-binding protein with serine-rich domain 1 OS=Homo sapiens OX=9606 GN=RNPS1 PE=1 SV=1)
HSP 1 Score: 87.0 bits (214), Expect = 2.9e-16
Identity = 63/156 (40.38%), Postives = 84/156 (53.85%), Query Frame = 0
Query: 1 RKPSPVRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRT-VNLPKGYGYVEFK 60
R PSP + +HI L+RNV + H+ EIF +G++ +++ ++R +L KGY YVEF+
Sbjct: 154 RSPSP--KPTKVHIGRLTRNVTKDHIMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFE 213
Query: 61 TRPDAEKAQVYMDGAQIDGNVIRVRFTLPQRQKMPTPPRTVAIAPKRDGPKPENVGADAE 120
+AEKA +MDG QIDG I L P PP P+R P P
Sbjct: 214 NPDEAEKALKHMDGGQIDGQEITATAVL---APWPRPPPRRFSPPRRMLPPP-------- 273
Query: 121 KDDMKRQREPSPRRKPPSPRRRSPVARRGGSPPRRQ 156
M R+ P RR+ SPRRRSPV RR SP RR+
Sbjct: 274 --PMWRRSPPRMRRRSRSPRRRSPVRRRSRSPGRRR 294
BLAST of MS004619 vs. ExPASy Swiss-Prot
Match:
Q4R5N1 (RNA-binding protein with serine-rich domain 1 OS=Macaca fascicularis OX=9541 GN=RNPS1 PE=2 SV=1)
HSP 1 Score: 87.0 bits (214), Expect = 2.9e-16
Identity = 63/156 (40.38%), Postives = 84/156 (53.85%), Query Frame = 0
Query: 1 RKPSPVRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRT-VNLPKGYGYVEFK 60
R PSP + +HI L+RNV + H+ EIF +G++ +++ ++R +L KGY YVEF+
Sbjct: 154 RSPSP--KPTKVHIGRLTRNVTKDHIMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFE 213
Query: 61 TRPDAEKAQVYMDGAQIDGNVIRVRFTLPQRQKMPTPPRTVAIAPKRDGPKPENVGADAE 120
+AEKA +MDG QIDG I L P PP P+R P P
Sbjct: 214 NPDEAEKALKHMDGGQIDGQEITATAVL---APWPRPPPRRFSPPRRMLPPP-------- 273
Query: 121 KDDMKRQREPSPRRKPPSPRRRSPVARRGGSPPRRQ 156
M R+ P RR+ SPRRRSPV RR SP RR+
Sbjct: 274 --PMWRRSPPRMRRRSRSPRRRSPVRRRSRSPGRRR 294
BLAST of MS004619 vs. ExPASy Swiss-Prot
Match:
Q99M28 (RNA-binding protein with serine-rich domain 1 OS=Mus musculus OX=10090 GN=Rnps1 PE=1 SV=1)
HSP 1 Score: 87.0 bits (214), Expect = 2.9e-16
Identity = 63/156 (40.38%), Postives = 84/156 (53.85%), Query Frame = 0
Query: 1 RKPSPVRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRT-VNLPKGYGYVEFK 60
R PSP + +HI L+RNV + H+ EIF +G++ +++ ++R +L KGY YVEF+
Sbjct: 154 RSPSP--KPTKVHIGRLTRNVTKDHIMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFE 213
Query: 61 TRPDAEKAQVYMDGAQIDGNVIRVRFTLPQRQKMPTPPRTVAIAPKRDGPKPENVGADAE 120
+AEKA +MDG QIDG I L P PP P+R P P
Sbjct: 214 NPDEAEKALKHMDGGQIDGQEITATAVL---APWPRPPPRRFSPPRRMLPPP-------- 273
Query: 121 KDDMKRQREPSPRRKPPSPRRRSPVARRGGSPPRRQ 156
M R+ P RR+ SPRRRSPV RR SP RR+
Sbjct: 274 --PMWRRSPPRMRRRSRSPRRRSPVRRRSRSPGRRR 294
BLAST of MS004619 vs. ExPASy Swiss-Prot
Match:
Q5NVM8 (RNA-binding protein with serine-rich domain 1 OS=Pongo abelii OX=9601 GN=RNPS1 PE=2 SV=1)
HSP 1 Score: 87.0 bits (214), Expect = 2.9e-16
Identity = 63/156 (40.38%), Postives = 84/156 (53.85%), Query Frame = 0
Query: 1 RKPSPVRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRT-VNLPKGYGYVEFK 60
R PSP + +HI L+RNV + H+ EIF +G++ +++ ++R +L KGY YVEF+
Sbjct: 154 RSPSP--KPTKVHIGRLTRNVTKDHIMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFE 213
Query: 61 TRPDAEKAQVYMDGAQIDGNVIRVRFTLPQRQKMPTPPRTVAIAPKRDGPKPENVGADAE 120
+AEKA +MDG QIDG I L P PP P+R P P
Sbjct: 214 NPDEAEKALKHMDGGQIDGQEITATAVL---APWPRPPPRRFSPPRRMLPPP-------- 273
Query: 121 KDDMKRQREPSPRRKPPSPRRRSPVARRGGSPPRRQ 156
M R+ P RR+ SPRRRSPV RR SP RR+
Sbjct: 274 --PMWRRSPPRMRRRSRSPRRRSPVRRRSRSPGRRR 294
BLAST of MS004619 vs. ExPASy TrEMBL
Match:
A0A6J1C2D4 (serine/arginine-rich splicing factor SR45 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111007818 PE=4 SV=1)
HSP 1 Score: 429.9 bits (1104), Expect = 6.8e-117
Identity = 227/228 (99.56%), Postives = 228/228 (100.00%), Query Frame = 0
Query: 1 RKPSPVRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRTVNLPKGYGYVEFKT 60
RKPSPVRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRTVNLPKGYGYVEFKT
Sbjct: 102 RKPSPVRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRTVNLPKGYGYVEFKT 161
Query: 61 RPDAEKAQVYMDGAQIDGNVIRVRFTLPQRQKMPTPPRTVAIAPKRDGPKPENVGADAEK 120
RPDAEKAQVYMDGAQIDGNVIRVRFTLPQRQKMPTPPRTVAIAPKRDGPKPENVGA+AEK
Sbjct: 162 RPDAEKAQVYMDGAQIDGNVIRVRFTLPQRQKMPTPPRTVAIAPKRDGPKPENVGANAEK 221
Query: 121 DDMKRQREPSPRRKPPSPRRRSPVARRGGSPPRRQPDSPRRRPESPPRRRVESPFRRDSP 180
DDMKRQREPSPRRKPPSPRRRSPVARRGGSPPRRQPDSPRRRPESPPRRRVESPFRRDSP
Sbjct: 222 DDMKRQREPSPRRKPPSPRRRSPVARRGGSPPRRQPDSPRRRPESPPRRRVESPFRRDSP 281
Query: 181 PRRRPASPIRGRSPSPLPRRHRSPPRPSPRRIRGSPVRRRSPPPPRRR 229
PRRRPASPIRGRSPSPLPRRHRSPPRPSPRRIRGSPVRRRSPPPPRRR
Sbjct: 282 PRRRPASPIRGRSPSPLPRRHRSPPRPSPRRIRGSPVRRRSPPPPRRR 329
BLAST of MS004619 vs. ExPASy TrEMBL
Match:
A0A6J1C2R4 (serine/arginine-rich splicing factor SR45 isoform X3 OS=Momordica charantia OX=3673 GN=LOC111007818 PE=4 SV=1)
HSP 1 Score: 423.7 bits (1088), Expect = 4.9e-115
Identity = 227/233 (97.42%), Postives = 228/233 (97.85%), Query Frame = 0
Query: 1 RKPSPVRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRT-----VNLPKGYGY 60
RKPSPVRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRT VNLPKGYGY
Sbjct: 79 RKPSPVRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRTVSLHHVNLPKGYGY 138
Query: 61 VEFKTRPDAEKAQVYMDGAQIDGNVIRVRFTLPQRQKMPTPPRTVAIAPKRDGPKPENVG 120
VEFKTRPDAEKAQVYMDGAQIDGNVIRVRFTLPQRQKMPTPPRTVAIAPKRDGPKPENVG
Sbjct: 139 VEFKTRPDAEKAQVYMDGAQIDGNVIRVRFTLPQRQKMPTPPRTVAIAPKRDGPKPENVG 198
Query: 121 ADAEKDDMKRQREPSPRRKPPSPRRRSPVARRGGSPPRRQPDSPRRRPESPPRRRVESPF 180
A+AEKDDMKRQREPSPRRKPPSPRRRSPVARRGGSPPRRQPDSPRRRPESPPRRRVESPF
Sbjct: 199 ANAEKDDMKRQREPSPRRKPPSPRRRSPVARRGGSPPRRQPDSPRRRPESPPRRRVESPF 258
Query: 181 RRDSPPRRRPASPIRGRSPSPLPRRHRSPPRPSPRRIRGSPVRRRSPPPPRRR 229
RRDSPPRRRPASPIRGRSPSPLPRRHRSPPRPSPRRIRGSPVRRRSPPPPRRR
Sbjct: 259 RRDSPPRRRPASPIRGRSPSPLPRRHRSPPRPSPRRIRGSPVRRRSPPPPRRR 311
BLAST of MS004619 vs. ExPASy TrEMBL
Match:
A0A6J1C6J2 (serine/arginine-rich splicing factor SR45 isoform X4 OS=Momordica charantia OX=3673 GN=LOC111007818 PE=4 SV=1)
HSP 1 Score: 423.7 bits (1088), Expect = 4.9e-115
Identity = 227/233 (97.42%), Postives = 228/233 (97.85%), Query Frame = 0
Query: 1 RKPSPVRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRT-----VNLPKGYGY 60
RKPSPVRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRT VNLPKGYGY
Sbjct: 77 RKPSPVRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRTVSLHHVNLPKGYGY 136
Query: 61 VEFKTRPDAEKAQVYMDGAQIDGNVIRVRFTLPQRQKMPTPPRTVAIAPKRDGPKPENVG 120
VEFKTRPDAEKAQVYMDGAQIDGNVIRVRFTLPQRQKMPTPPRTVAIAPKRDGPKPENVG
Sbjct: 137 VEFKTRPDAEKAQVYMDGAQIDGNVIRVRFTLPQRQKMPTPPRTVAIAPKRDGPKPENVG 196
Query: 121 ADAEKDDMKRQREPSPRRKPPSPRRRSPVARRGGSPPRRQPDSPRRRPESPPRRRVESPF 180
A+AEKDDMKRQREPSPRRKPPSPRRRSPVARRGGSPPRRQPDSPRRRPESPPRRRVESPF
Sbjct: 197 ANAEKDDMKRQREPSPRRKPPSPRRRSPVARRGGSPPRRQPDSPRRRPESPPRRRVESPF 256
Query: 181 RRDSPPRRRPASPIRGRSPSPLPRRHRSPPRPSPRRIRGSPVRRRSPPPPRRR 229
RRDSPPRRRPASPIRGRSPSPLPRRHRSPPRPSPRRIRGSPVRRRSPPPPRRR
Sbjct: 257 RRDSPPRRRPASPIRGRSPSPLPRRHRSPPRPSPRRIRGSPVRRRSPPPPRRR 309
BLAST of MS004619 vs. ExPASy TrEMBL
Match:
A0A6J1C2C4 (serine/arginine-rich splicing factor SR45 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111007818 PE=4 SV=1)
HSP 1 Score: 423.7 bits (1088), Expect = 4.9e-115
Identity = 227/233 (97.42%), Postives = 228/233 (97.85%), Query Frame = 0
Query: 1 RKPSPVRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRT-----VNLPKGYGY 60
RKPSPVRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRT VNLPKGYGY
Sbjct: 102 RKPSPVRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRTVSLHHVNLPKGYGY 161
Query: 61 VEFKTRPDAEKAQVYMDGAQIDGNVIRVRFTLPQRQKMPTPPRTVAIAPKRDGPKPENVG 120
VEFKTRPDAEKAQVYMDGAQIDGNVIRVRFTLPQRQKMPTPPRTVAIAPKRDGPKPENVG
Sbjct: 162 VEFKTRPDAEKAQVYMDGAQIDGNVIRVRFTLPQRQKMPTPPRTVAIAPKRDGPKPENVG 221
Query: 121 ADAEKDDMKRQREPSPRRKPPSPRRRSPVARRGGSPPRRQPDSPRRRPESPPRRRVESPF 180
A+AEKDDMKRQREPSPRRKPPSPRRRSPVARRGGSPPRRQPDSPRRRPESPPRRRVESPF
Sbjct: 222 ANAEKDDMKRQREPSPRRKPPSPRRRSPVARRGGSPPRRQPDSPRRRPESPPRRRVESPF 281
Query: 181 RRDSPPRRRPASPIRGRSPSPLPRRHRSPPRPSPRRIRGSPVRRRSPPPPRRR 229
RRDSPPRRRPASPIRGRSPSPLPRRHRSPPRPSPRRIRGSPVRRRSPPPPRRR
Sbjct: 282 RRDSPPRRRPASPIRGRSPSPLPRRHRSPPRPSPRRIRGSPVRRRSPPPPRRR 334
BLAST of MS004619 vs. ExPASy TrEMBL
Match:
A0A0A0KZM9 (RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G607050 PE=4 SV=1)
HSP 1 Score: 396.4 bits (1017), Expect = 8.3e-107
Identity = 217/230 (94.35%), Postives = 220/230 (95.65%), Query Frame = 0
Query: 1 RKPSPVRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRTVNLPKGYGYVEFKT 60
RKPSPVRESLVLHIDALSRNVHEGHLREIF NFGEVVNVELAMDRTVNLPKGYGYVEFKT
Sbjct: 98 RKPSPVRESLVLHIDALSRNVHEGHLREIFSNFGEVVNVELAMDRTVNLPKGYGYVEFKT 157
Query: 61 RPDAEKAQVYMDGAQIDGNVIRVRFTLPQRQKMPTPPRTVAIAPKRDGPKPENVGADAEK 120
R DAEKAQVYMDGAQIDGNVIR RFTLPQRQKMPTPPRTVA PKRDGPKPENVG DAEK
Sbjct: 158 RSDAEKAQVYMDGAQIDGNVIRARFTLPQRQKMPTPPRTVATVPKRDGPKPENVGPDAEK 217
Query: 121 DDMKRQREPSPRRKPPSPRRRSPVARRGGSPPRRQPDSPRRRPESPPRRRVESPFRRDS- 180
DDMKRQREPSPRRKPPSPRRRSPVARRGGS PRRQPDSPRRRP+SPPRRR+ESPFRRDS
Sbjct: 218 DDMKRQREPSPRRKPPSPRRRSPVARRGGS-PRRQPDSPRRRPDSPPRRRIESPFRRDSP 277
Query: 181 PPRRRPASPIR-GRSPSPLPRRHRSPPRPSPRRIRGSPVRRRSPPPPRRR 229
PPRRRPASP+R GRSPSPL RRHRSPPRPSPRRIRGSPVRRRSPPPPRRR
Sbjct: 278 PPRRRPASPMRGGRSPSPLARRHRSPPRPSPRRIRGSPVRRRSPPPPRRR 326
BLAST of MS004619 vs. TAIR 10
Match:
AT1G16610.1 (arginine/serine-rich 45 )
HSP 1 Score: 261.9 bits (668), Expect = 4.7e-70
Identity = 160/227 (70.48%), Postives = 183/227 (80.62%), Query Frame = 0
Query: 6 VRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRTVNLPKGYGYVEFKTRPDAE 65
V+ESLVLH+D+LSRNV+E HL+EIF NFGEV++VE+AMDR VNLP+G+GYVEFK R DAE
Sbjct: 94 VQESLVLHVDSLSRNVNEAHLKEIFGNFGEVIHVEIAMDRAVNLPRGHGYVEFKARADAE 153
Query: 66 KAQVYMDGAQIDGNVIRVRFTLPQRQKMPTPPRTVAIAPKRDGPKPENVGADAEKD-DMK 125
KAQ+YMDGAQIDG V++ FTLP RQK+ +PP+ V+ APKRD PK +N ADAEKD +
Sbjct: 154 KAQLYMDGAQIDGKVVKATFTLPPRQKVSSPPKPVSAAPKRDAPKSDNAAADAEKDGGPR 213
Query: 126 RQREPSPRRKPP-SPRRRSPVARRGGSPPRRQPDSP-RRRPESPPRRRVESPFRRDSPPR 185
R RE SP+RK SPRRRSP+ RRG SP RR PDSP RRRP SP RR R D+PPR
Sbjct: 214 RPRETSPQRKTGLSPRRRSPLPRRGLSPRRRSPDSPHRRRPGSPIRR------RGDTPPR 273
Query: 186 RRPASPIRGRSP-SPLPRRHRSPPRPSPRRIRGSPVRRRSPPPPRRR 229
RRPASP RGRSP SP PRR+RSPPR SPRRIRGSPVRRRSP P RRR
Sbjct: 274 RRPASPSRGRSPSSPPPRRYRSPPRGSPRRIRGSPVRRRSPLPLRRR 314
BLAST of MS004619 vs. TAIR 10
Match:
AT1G16610.3 (arginine/serine-rich 45 )
HSP 1 Score: 261.9 bits (668), Expect = 4.7e-70
Identity = 160/227 (70.48%), Postives = 183/227 (80.62%), Query Frame = 0
Query: 6 VRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRTVNLPKGYGYVEFKTRPDAE 65
V+ESLVLH+D+LSRNV+E HL+EIF NFGEV++VE+AMDR VNLP+G+GYVEFK R DAE
Sbjct: 94 VQESLVLHVDSLSRNVNEAHLKEIFGNFGEVIHVEIAMDRAVNLPRGHGYVEFKARADAE 153
Query: 66 KAQVYMDGAQIDGNVIRVRFTLPQRQKMPTPPRTVAIAPKRDGPKPENVGADAEKD-DMK 125
KAQ+YMDGAQIDG V++ FTLP RQK+ +PP+ V+ APKRD PK +N ADAEKD +
Sbjct: 154 KAQLYMDGAQIDGKVVKATFTLPPRQKVSSPPKPVSAAPKRDAPKSDNAAADAEKDGGPR 213
Query: 126 RQREPSPRRKPP-SPRRRSPVARRGGSPPRRQPDSP-RRRPESPPRRRVESPFRRDSPPR 185
R RE SP+RK SPRRRSP+ RRG SP RR PDSP RRRP SP RR R D+PPR
Sbjct: 214 RPRETSPQRKTGLSPRRRSPLPRRGLSPRRRSPDSPHRRRPGSPIRR------RGDTPPR 273
Query: 186 RRPASPIRGRSP-SPLPRRHRSPPRPSPRRIRGSPVRRRSPPPPRRR 229
RRPASP RGRSP SP PRR+RSPPR SPRRIRGSPVRRRSP P RRR
Sbjct: 274 RRPASPSRGRSPSSPPPRRYRSPPRGSPRRIRGSPVRRRSPLPLRRR 314
BLAST of MS004619 vs. TAIR 10
Match:
AT1G16610.2 (arginine/serine-rich 45 )
HSP 1 Score: 255.4 bits (651), Expect = 4.4e-68
Identity = 156/225 (69.33%), Postives = 179/225 (79.56%), Query Frame = 0
Query: 6 VRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRTVNLPKGYGYVEFKTRPDAE 65
V+ESLVLH+D+LSRNV+E HL+EIF NFGEV++VE+AMDR VNLP+G+GYVEFK R DAE
Sbjct: 94 VQESLVLHVDSLSRNVNEAHLKEIFGNFGEVIHVEIAMDRAVNLPRGHGYVEFKARADAE 153
Query: 66 KAQVYMDGAQIDGNVIRVRFTLPQRQKMPTPPRTVAIAPKRDGPKPENVGADAEKDDMKR 125
KAQ+YMDGAQIDG V++ FTLP RQK+ +PP+ V+ APKRD PK +N ADAEKD R
Sbjct: 154 KAQLYMDGAQIDGKVVKATFTLPPRQKVSSPPKPVSAAPKRDAPKSDNAAADAEKDGGPR 213
Query: 126 QREPSPRRKPPSPRRRSPVARRGGSPPRRQPDSP-RRRPESPPRRRVESPFRRDSPPRRR 185
+ PR + SPRRRSP+ RRG SP RR PDSP RRRP SP RR R D+PPRRR
Sbjct: 214 R----PRER-LSPRRRSPLPRRGLSPRRRSPDSPHRRRPGSPIRR------RGDTPPRRR 273
Query: 186 PASPIRGRSP-SPLPRRHRSPPRPSPRRIRGSPVRRRSPPPPRRR 229
PASP RGRSP SP PRR+RSPPR SPRRIRGSPVRRRSP P RRR
Sbjct: 274 PASPSRGRSPSSPPPRRYRSPPRGSPRRIRGSPVRRRSPLPLRRR 307
BLAST of MS004619 vs. TAIR 10
Match:
AT3G13570.1 (SC35-like splicing factor 30A )
HSP 1 Score: 45.4 bits (106), Expect = 6.9e-05
Identity = 72/232 (31.03%), Postives = 99/232 (42.67%), Query Frame = 0
Query: 17 LSRNVHEGHLREIFCNFGEVVNVELAMDRTVNLPKGYGYVEFKTRPDAEKAQVYMDGAQI 76
L + + LR F FG V ++ L D P+G+G+++F DA +A+ MDG +
Sbjct: 44 LRHDCRQEDLRRPFEQFGPVKDIYLPRDYYTGDPRGFGFIQFMDPADAAEAKHQMDGYLL 103
Query: 77 DGNVIRVRFTLPQRQKMPTPPRTVAIAPKRDGPKPENVGADAEKDDMKRQREPSPRR--- 136
G + V F R+K PT RT RD N D + + R P PRR
Sbjct: 104 LGRELTVVFAEENRKK-PTEMRT------RDRGGRSNRFQDRRRSPPRYSRSPPPRRGRR 163
Query: 137 ---------KPPSPRRRSPVARRGGSPPRRQPDSPRRRPESPP--------------RRR 196
PP+ R +S R SP R+ + R SPP +
Sbjct: 164 SRSRSRGYNSPPAKRHQS----RSVSPQDRRYEKERSYSRSPPHNGSRVRSGSPGRVKSH 223
Query: 197 VESPFRRDSPPRRRPASPIRGRSPSPLPRRHRSPPRPSPRRIRGSPVRRRSP 223
SP R SP + R +P + RS SP+PR+ RS P P P RG+ RSP
Sbjct: 224 SRSPRRSVSPRKNRSYTPEQARSQSPVPRQSRS-PTPVP---RGAQNGDRSP 260
BLAST of MS004619 vs. TAIR 10
Match:
AT2G29210.1 (splicing factor PWI domain-containing protein )
HSP 1 Score: 43.9 bits (102), Expect = 2.0e-04
Identity = 60/142 (42.25%), Postives = 75/142 (52.82%), Query Frame = 0
Query: 88 PQRQKMPTPPRTVAIAPKRDGPKPENVGADAEKDDMKRQREPSPRRKPPSPRRRSPVARR 147
P+R+++ +P R+ + +P R +P + G +R+R PS PP+ RRRSP
Sbjct: 272 PRRRRIHSPFRSRSRSPIRRHRRPTHEGRRQSPAPSRRRRSPS----PPARRRRSP---- 331
Query: 148 GGSPPRRQPDSPRRRPESPPRRRVESPFRRDSPPRRRPASPIRGRSPSPLPRRHRSPPRP 207
SPP R RRR SPP RR SP +PP R + RSPSP RRHRSPP
Sbjct: 332 --SPPAR-----RRRSPSPPARRHRSP----TPPAR------QRRSPSPPARRHRSPPPA 388
Query: 208 SPRRIRGSPV-RRRSPPPPRRR 229
RR P RRRSP PP RR
Sbjct: 392 RRRRSPSPPARRRRSPSPPARR 388
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022136031.1 | 1.4e-116 | 99.56 | serine/arginine-rich splicing factor SR45 isoform X2 [Momordica charantia] | [more] |
XP_022136021.1 | 1.0e-114 | 97.42 | serine/arginine-rich splicing factor SR45 isoform X1 [Momordica charantia] | [more] |
XP_022136048.1 | 1.0e-114 | 97.42 | serine/arginine-rich splicing factor SR45 isoform X4 [Momordica charantia] | [more] |
XP_022136040.1 | 1.0e-114 | 97.42 | serine/arginine-rich splicing factor SR45 isoform X3 [Momordica charantia] | [more] |
XP_031740559.1 | 1.7e-106 | 94.35 | serine/arginine-rich splicing factor SR45 [Cucumis sativus] >KAE8649784.1 hypoth... | [more] |
Match Name | E-value | Identity | Description | |
Q9SEE9 | 6.6e-69 | 70.48 | Serine/arginine-rich splicing factor SR45 OS=Arabidopsis thaliana OX=3702 GN=SR4... | [more] |
Q15287 | 2.9e-16 | 40.38 | RNA-binding protein with serine-rich domain 1 OS=Homo sapiens OX=9606 GN=RNPS1 P... | [more] |
Q4R5N1 | 2.9e-16 | 40.38 | RNA-binding protein with serine-rich domain 1 OS=Macaca fascicularis OX=9541 GN=... | [more] |
Q99M28 | 2.9e-16 | 40.38 | RNA-binding protein with serine-rich domain 1 OS=Mus musculus OX=10090 GN=Rnps1 ... | [more] |
Q5NVM8 | 2.9e-16 | 40.38 | RNA-binding protein with serine-rich domain 1 OS=Pongo abelii OX=9601 GN=RNPS1 P... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1C2D4 | 6.8e-117 | 99.56 | serine/arginine-rich splicing factor SR45 isoform X2 OS=Momordica charantia OX=3... | [more] |
A0A6J1C2R4 | 4.9e-115 | 97.42 | serine/arginine-rich splicing factor SR45 isoform X3 OS=Momordica charantia OX=3... | [more] |
A0A6J1C6J2 | 4.9e-115 | 97.42 | serine/arginine-rich splicing factor SR45 isoform X4 OS=Momordica charantia OX=3... | [more] |
A0A6J1C2C4 | 4.9e-115 | 97.42 | serine/arginine-rich splicing factor SR45 isoform X1 OS=Momordica charantia OX=3... | [more] |
A0A0A0KZM9 | 8.3e-107 | 94.35 | RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G607050 PE=4 SV... | [more] |