Homology
BLAST of MS003088 vs. NCBI nr
Match:
ADQ42094.1 (photosystem II protein D1, partial [Dichanthelium scoparium])
HSP 1 Score: 55.8 bits (133), Expect = 7.7e-05
Identity = 24/31 (77.42%), Postives = 26/31 (83.87%), Query Frame = 0
Query: 1 NRVNFGMEVMHEHNAHNFPPDLPALEILSIN 32
NR N GMEVMHEHNAHNFP DL ALE+ S+N
Sbjct: 47 NRANLGMEVMHEHNAHNFPLDLAALEVPSLN 77
BLAST of MS003088 vs. NCBI nr
Match:
YP_009766739.1 (photosystem II protein D1 [Intsia bijuga] >QIS97274.1 photosystem II protein D1 [Intsia bijuga])
HSP 1 Score: 55.5 bits (132), Expect = 1.0e-04
Identity = 24/31 (77.42%), Postives = 26/31 (83.87%), Query Frame = 0
Query: 1 NRVNFGMEVMHEHNAHNFPPDLPALEILSIN 32
NR N GMEVMHE NAHNFP DL A+E+LSIN
Sbjct: 322 NRANLGMEVMHERNAHNFPLDLAAIEVLSIN 352
BLAST of MS003088 vs. NCBI nr
Match:
KAF7022115.1 (hypothetical protein CFC21_034946 [Triticum aestivum])
HSP 1 Score: 55.5 bits (132), Expect = 1.0e-04
Identity = 24/31 (77.42%), Postives = 26/31 (83.87%), Query Frame = 0
Query: 1 NRVNFGMEVMHEHNAHNFPPDLPALEILSIN 32
NR N GMEVMHEHNAHNFP DL A+E+ SIN
Sbjct: 196 NRANLGMEVMHEHNAHNFPLDLAAVEVPSIN 226
BLAST of MS003088 vs. NCBI nr
Match:
AKI84881.1 (photosystem II protein D1 [Geranium subcaulescens])
HSP 1 Score: 55.1 bits (131), Expect = 1.3e-04
Identity = 24/31 (77.42%), Postives = 26/31 (83.87%), Query Frame = 0
Query: 1 NRVNFGMEVMHEHNAHNFPPDLPALEILSIN 32
NR N GMEVMHE NAHNFP DL A+E+LSIN
Sbjct: 322 NRANLGMEVMHERNAHNFPLDLAAVEVLSIN 352
BLAST of MS003088 vs. NCBI nr
Match:
YP_009766151.1 (photosystem II protein D1 [Afzelia quanzensis] >YP_010158070.1 photosystem II protein D1 [Afzelia xylocarpa] >AOW68606.1 photosystem II protein D1 [Afzelia africana] >AOW68689.1 photosystem II protein D1 [Intsia bijuga] >QWY85673.1 photosystem II protein D1 [Afzelia bella] >QWY85756.1 photosystem II protein D1 [Afzelia bipindensis] >QIS96511.1 photosystem II protein D1 [Afzelia quanzensis])
HSP 1 Score: 53.9 bits (128), Expect = 2.9e-04
Identity = 24/31 (77.42%), Postives = 25/31 (80.65%), Query Frame = 0
Query: 1 NRVNFGMEVMHEHNAHNFPPDLPALEILSIN 32
NR N GMEVMHE NAHNFP DL A+E LSIN
Sbjct: 322 NRANLGMEVMHERNAHNFPLDLAAIEALSIN 352
BLAST of MS003088 vs. ExPASy Swiss-Prot
Match:
A1E9Y8 (Photosystem II protein D1 OS=Agrostis stolonifera OX=63632 GN=psbA PE=3 SV=1)
HSP 1 Score: 53.5 bits (127), Expect = 5.0e-07
Identity = 24/31 (77.42%), Postives = 25/31 (80.65%), Query Frame = 0
Query: 1 NRVNFGMEVMHEHNAHNFPPDLPALEILSIN 32
NR N GMEVMHE NAHNFP DL ALE+ SIN
Sbjct: 322 NRANLGMEVMHERNAHNFPLDLAALEVPSIN 352
BLAST of MS003088 vs. ExPASy Swiss-Prot
Match:
A8Y9F0 (Photosystem II protein D1 OS=Lolium perenne OX=4522 GN=psbA PE=3 SV=1)
HSP 1 Score: 52.8 bits (125), Expect = 8.6e-07
Identity = 23/31 (74.19%), Postives = 25/31 (80.65%), Query Frame = 0
Query: 1 NRVNFGMEVMHEHNAHNFPPDLPALEILSIN 32
NR N GMEVMHE NAHNFP DL ALE+ S+N
Sbjct: 322 NRANLGMEVMHERNAHNFPLDLAALEVPSLN 352
BLAST of MS003088 vs. ExPASy Swiss-Prot
Match:
Q6ENJ7 (Photosystem II protein D1 OS=Oryza nivara OX=4536 GN=psbA PE=3 SV=1)
HSP 1 Score: 52.8 bits (125), Expect = 8.6e-07
Identity = 23/31 (74.19%), Postives = 25/31 (80.65%), Query Frame = 0
Query: 1 NRVNFGMEVMHEHNAHNFPPDLPALEILSIN 32
NR N GMEVMHE NAHNFP DL ALE+ S+N
Sbjct: 322 NRANLGMEVMHERNAHNFPLDLAALEVPSLN 352
BLAST of MS003088 vs. ExPASy Swiss-Prot
Match:
P0C432 (Photosystem II protein D1 OS=Oryza sativa OX=4530 GN=psbA PE=3 SV=1)
HSP 1 Score: 52.8 bits (125), Expect = 8.6e-07
Identity = 23/31 (74.19%), Postives = 25/31 (80.65%), Query Frame = 0
Query: 1 NRVNFGMEVMHEHNAHNFPPDLPALEILSIN 32
NR N GMEVMHE NAHNFP DL ALE+ S+N
Sbjct: 322 NRANLGMEVMHERNAHNFPLDLAALEVPSLN 352
BLAST of MS003088 vs. ExPASy Swiss-Prot
Match:
P0C433 (Photosystem II protein D1 OS=Oryza sativa subsp. indica OX=39946 GN=psbA PE=3 SV=1)
HSP 1 Score: 52.8 bits (125), Expect = 8.6e-07
Identity = 23/31 (74.19%), Postives = 25/31 (80.65%), Query Frame = 0
Query: 1 NRVNFGMEVMHEHNAHNFPPDLPALEILSIN 32
NR N GMEVMHE NAHNFP DL ALE+ S+N
Sbjct: 322 NRANLGMEVMHERNAHNFPLDLAALEVPSLN 352
BLAST of MS003088 vs. ExPASy TrEMBL
Match:
E5FAQ5 (Photosystem II protein D1 (Fragment) OS=Dichanthelium scoparium OX=888270 GN=psbA PE=3 SV=1)
HSP 1 Score: 55.8 bits (133), Expect = 3.7e-05
Identity = 24/31 (77.42%), Postives = 26/31 (83.87%), Query Frame = 0
Query: 1 NRVNFGMEVMHEHNAHNFPPDLPALEILSIN 32
NR N GMEVMHEHNAHNFP DL ALE+ S+N
Sbjct: 47 NRANLGMEVMHEHNAHNFPLDLAALEVPSLN 77
BLAST of MS003088 vs. ExPASy TrEMBL
Match:
A0A6H0E5N2 (Photosystem II protein D1 OS=Intsia bijuga OX=162812 GN=psbA PE=3 SV=1)
HSP 1 Score: 55.5 bits (132), Expect = 4.9e-05
Identity = 24/31 (77.42%), Postives = 26/31 (83.87%), Query Frame = 0
Query: 1 NRVNFGMEVMHEHNAHNFPPDLPALEILSIN 32
NR N GMEVMHE NAHNFP DL A+E+LSIN
Sbjct: 322 NRANLGMEVMHERNAHNFPLDLAAIEVLSIN 352
BLAST of MS003088 vs. ExPASy TrEMBL
Match:
A0A3B6MI93 (Photosystem II protein D1 OS=Triticum aestivum OX=4565 PE=3 SV=1)
HSP 1 Score: 55.5 bits (132), Expect = 4.9e-05
Identity = 24/31 (77.42%), Postives = 26/31 (83.87%), Query Frame = 0
Query: 1 NRVNFGMEVMHEHNAHNFPPDLPALEILSIN 32
NR N GMEVMHEHNAHNFP DL A+E+ SIN
Sbjct: 290 NRANLGMEVMHEHNAHNFPLDLAAVEVPSIN 320
BLAST of MS003088 vs. ExPASy TrEMBL
Match:
A0A3B6KN25 (Uncharacterized protein OS=Triticum aestivum OX=4565 PE=3 SV=1)
HSP 1 Score: 55.5 bits (132), Expect = 4.9e-05
Identity = 24/31 (77.42%), Postives = 26/31 (83.87%), Query Frame = 0
Query: 1 NRVNFGMEVMHEHNAHNFPPDLPALEILSIN 32
NR N GMEVMHEHNAHNFP DL A+E+ SIN
Sbjct: 196 NRANLGMEVMHEHNAHNFPLDLAAVEVPSIN 226
BLAST of MS003088 vs. ExPASy TrEMBL
Match:
A0A0G2YIE5 (Photosystem II protein D1 OS=Geranium subcaulescens OX=1368268 GN=psbA PE=3 SV=1)
HSP 1 Score: 55.1 bits (131), Expect = 6.4e-05
Identity = 24/31 (77.42%), Postives = 26/31 (83.87%), Query Frame = 0
Query: 1 NRVNFGMEVMHEHNAHNFPPDLPALEILSIN 32
NR N GMEVMHE NAHNFP DL A+E+LSIN
Sbjct: 322 NRANLGMEVMHERNAHNFPLDLAAVEVLSIN 352
BLAST of MS003088 vs. TAIR 10
Match:
ATCG00020.1 (photosystem II reaction center protein A )
HSP 1 Score: 48.9 bits (115), Expect = 8.8e-07
Identity = 22/31 (70.97%), Postives = 23/31 (74.19%), Query Frame = 0
Query: 1 NRVNFGMEVMHEHNAHNFPPDLPALEILSIN 32
NR N GMEVMHE NAHNFP DL A+E S N
Sbjct: 322 NRANLGMEVMHERNAHNFPLDLAAVEAPSTN 352
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
ADQ42094.1 | 7.7e-05 | 77.42 | photosystem II protein D1, partial [Dichanthelium scoparium] | [more] |
YP_009766739.1 | 1.0e-04 | 77.42 | photosystem II protein D1 [Intsia bijuga] >QIS97274.1 photosystem II protein D1 ... | [more] |
KAF7022115.1 | 1.0e-04 | 77.42 | hypothetical protein CFC21_034946 [Triticum aestivum] | [more] |
AKI84881.1 | 1.3e-04 | 77.42 | photosystem II protein D1 [Geranium subcaulescens] | [more] |
YP_009766151.1 | 2.9e-04 | 77.42 | photosystem II protein D1 [Afzelia quanzensis] >YP_010158070.1 photosystem II pr... | [more] |
Match Name | E-value | Identity | Description | |
A1E9Y8 | 5.0e-07 | 77.42 | Photosystem II protein D1 OS=Agrostis stolonifera OX=63632 GN=psbA PE=3 SV=1 | [more] |
A8Y9F0 | 8.6e-07 | 74.19 | Photosystem II protein D1 OS=Lolium perenne OX=4522 GN=psbA PE=3 SV=1 | [more] |
Q6ENJ7 | 8.6e-07 | 74.19 | Photosystem II protein D1 OS=Oryza nivara OX=4536 GN=psbA PE=3 SV=1 | [more] |
P0C432 | 8.6e-07 | 74.19 | Photosystem II protein D1 OS=Oryza sativa OX=4530 GN=psbA PE=3 SV=1 | [more] |
P0C433 | 8.6e-07 | 74.19 | Photosystem II protein D1 OS=Oryza sativa subsp. indica OX=39946 GN=psbA PE=3 SV... | [more] |
Match Name | E-value | Identity | Description | |
E5FAQ5 | 3.7e-05 | 77.42 | Photosystem II protein D1 (Fragment) OS=Dichanthelium scoparium OX=888270 GN=psb... | [more] |
A0A6H0E5N2 | 4.9e-05 | 77.42 | Photosystem II protein D1 OS=Intsia bijuga OX=162812 GN=psbA PE=3 SV=1 | [more] |
A0A3B6MI93 | 4.9e-05 | 77.42 | Photosystem II protein D1 OS=Triticum aestivum OX=4565 PE=3 SV=1 | [more] |
A0A3B6KN25 | 4.9e-05 | 77.42 | Uncharacterized protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | [more] |
A0A0G2YIE5 | 6.4e-05 | 77.42 | Photosystem II protein D1 OS=Geranium subcaulescens OX=1368268 GN=psbA PE=3 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
ATCG00020.1 | 8.8e-07 | 70.97 | photosystem II reaction center protein A | [more] |