MS002497 (gene) Bitter gourd (TR) v1

Overview
NameMS002497
Typegene
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionS-protein homolog
Locationscaffold318: 537582 .. 537998 (+)
RNA-Seq ExpressionMS002497
SyntenyMS002497
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGCATCCACAAGAGCTACATTCTCTTGCTCGTAATGTCCCTTTTTTTGAGCACTGAACTACAAGTGAGTGACGCATTGTTTGACAAGTTTTACGTCCACATTATCAATGGCTTCAACAACGCAACCATCGGAGCTCATTGCAGGTCGAAAGACGATGATCTAGGCAACCAGTTCATCCCAGTCGGGGGCGAGTTCCATTGGAATTTTAAAACAAATTTGTTCGGGACGACGTTGTTCTATTGCCATCTATGGTGGATCGAAGGGCACATTACGTACCTAGCGTATTGGCACGACGACGGGTTTGAGAATGATATATGTCGAGATGGACATTGCAGATGGAAAGCAGAAGCTCAGGGAATTTCTAGTTTCAATGTTAGGCAAGATGTGTATCAATTGCAATACAAATGGCAACAT

mRNA sequence

ATGGGCATCCACAAGAGCTACATTCTCTTGCTCGTAATGTCCCTTTTTTTGAGCACTGAACTACAAGTGAGTGACGCATTGTTTGACAAGTTTTACGTCCACATTATCAATGGCTTCAACAACGCAACCATCGGAGCTCATTGCAGGTCGAAAGACGATGATCTAGGCAACCAGTTCATCCCAGTCGGGGGCGAGTTCCATTGGAATTTTAAAACAAATTTGTTCGGGACGACGTTGTTCTATTGCCATCTATGGTGGATCGAAGGGCACATTACGTACCTAGCGTATTGGCACGACGACGGGTTTGAGAATGATATATGTCGAGATGGACATTGCAGATGGAAAGCAGAAGCTCAGGGAATTTCTAGTTTCAATGTTAGGCAAGATGTGTATCAATTGCAATACAAATGGCAACAT

Coding sequence (CDS)

ATGGGCATCCACAAGAGCTACATTCTCTTGCTCGTAATGTCCCTTTTTTTGAGCACTGAACTACAAGTGAGTGACGCATTGTTTGACAAGTTTTACGTCCACATTATCAATGGCTTCAACAACGCAACCATCGGAGCTCATTGCAGGTCGAAAGACGATGATCTAGGCAACCAGTTCATCCCAGTCGGGGGCGAGTTCCATTGGAATTTTAAAACAAATTTGTTCGGGACGACGTTGTTCTATTGCCATCTATGGTGGATCGAAGGGCACATTACGTACCTAGCGTATTGGCACGACGACGGGTTTGAGAATGATATATGTCGAGATGGACATTGCAGATGGAAAGCAGAAGCTCAGGGAATTTCTAGTTTCAATGTTAGGCAAGATGTGTATCAATTGCAATACAAATGGCAACAT

Protein sequence

MGIHKSYILLLVMSLFLSTELQVSDALFDKFYVHIINGFNNATIGAHCRSKDDDLGNQFIPVGGEFHWNFKTNLFGTTLFYCHLWWIEGHITYLAYWHDDGFENDICRDGHCRWKAEAQGISSFNVRQDVYQLQYKWQH
Homology
BLAST of MS002497 vs. NCBI nr
Match: KAA0050599.1 (pumilio-like protein 15-like [Cucumis melo var. makuwa] >TYK07841.1 pumilio-like protein 15-like [Cucumis melo var. makuwa])

HSP 1 Score: 218.0 bits (554), Expect = 5.1e-53
Identity = 100/140 (71.43%), Postives = 114/140 (81.43%), Query Frame = 0

Query: 1   MGIHKSYILLLVMSLFLSTEL-QVSDALFDKFYVHIINGFNNATIGAHCRSKDDDLGNQF 60
           MG  KS+I+LLV+S  LSTEL QVS+A FDKFYVHIINGF+NATIGAHCRSKDDDL NQF
Sbjct: 1   MGNRKSFIILLVISTALSTELTQVSNAFFDKFYVHIINGFDNATIGAHCRSKDDDLSNQF 60

Query: 61  IPVGGEFHWNFKTNLFGTTLFYCHLWWIEGHITYLAYWHDDGFENDICRDGHCRWKAEAQ 120
           IPV GEF W+F+TN FGTTLFYCH+WWI G ITY AYWH++ FE  +C DGHCRWKA+ Q
Sbjct: 61  IPVNGEFQWHFRTNFFGTTLFYCHVWWIGGQITYKAYWHENDFELSVCGDGHCRWKADPQ 120

Query: 121 GISSFNVRQDVYQLQYKWQH 140
           GIS + V Q  Y L Y W+H
Sbjct: 121 GISCYFVDQKRYALTYLWEH 140

BLAST of MS002497 vs. NCBI nr
Match: XP_031745088.1 (S-protein homolog 3-like [Cucumis sativus])

HSP 1 Score: 215.3 bits (547), Expect = 3.3e-52
Identity = 98/129 (75.97%), Postives = 110/129 (85.27%), Query Frame = 0

Query: 1   MGIHKSYILLLVMSLFLSTEL-QVSDALFDKFYVHIINGFNNATIGAHCRSKDDDLGNQF 60
           MGI KSYI+LLV+S+ LS EL QVS ALF+KFYVHIINGF+NATIGAHCRSKDDDLGNQF
Sbjct: 1   MGIRKSYIILLVISIALSAELTQVSSALFEKFYVHIINGFDNATIGAHCRSKDDDLGNQF 60

Query: 61  IPVGGEFHWNFKTNLFGTTLFYCHLWWIEGHITYLAYWHDDGFENDICRDGHCRWKAEAQ 120
           IPV  EFHWNF+TN  GTTLFYCH+WWI GHITY AYWH++ FE   C DGHCRWKA+ Q
Sbjct: 61  IPVNAEFHWNFRTNFLGTTLFYCHVWWIGGHITYKAYWHENDFELSRCGDGHCRWKADPQ 120

Query: 121 GISSFNVRQ 129
           G+SS+ V Q
Sbjct: 121 GVSSYFVDQ 129

BLAST of MS002497 vs. NCBI nr
Match: KAE8646226.1 (hypothetical protein Csa_016670 [Cucumis sativus])

HSP 1 Score: 215.3 bits (547), Expect = 3.3e-52
Identity = 98/129 (75.97%), Postives = 110/129 (85.27%), Query Frame = 0

Query: 1   MGIHKSYILLLVMSLFLSTEL-QVSDALFDKFYVHIINGFNNATIGAHCRSKDDDLGNQF 60
           MGI KSYI+LLV+S+ LS EL QVS ALF+KFYVHIINGF+NATIGAHCRSKDDDLGNQF
Sbjct: 1   MGIRKSYIILLVISIALSAELTQVSSALFEKFYVHIINGFDNATIGAHCRSKDDDLGNQF 60

Query: 61  IPVGGEFHWNFKTNLFGTTLFYCHLWWIEGHITYLAYWHDDGFENDICRDGHCRWKAEAQ 120
           IPV  EFHWNF+TN  GTTLFYCH+WWI GHITY AYWH++ FE   C DGHCRWKA+ Q
Sbjct: 61  IPVNAEFHWNFRTNFLGTTLFYCHVWWIGGHITYKAYWHENDFELSRCGDGHCRWKADPQ 120

Query: 121 GISSFNVRQ 129
           G+SS+ V Q
Sbjct: 121 GVSSYFVDQ 129

BLAST of MS002497 vs. NCBI nr
Match: KAG2712057.1 (hypothetical protein I3760_04G107500 [Carya illinoinensis] >KAG6717558.1 hypothetical protein I3842_04G106900 [Carya illinoinensis] >KAG7983312.1 hypothetical protein I3843_04G099800 [Carya illinoinensis])

HSP 1 Score: 124.8 bits (312), Expect = 5.9e-25
Identity = 60/134 (44.78%), Postives = 86/134 (64.18%), Query Frame = 0

Query: 6   SYILLLVMSLFLSTELQVSDALFDKFYVHIINGFNNATIGAHCRSKDDDLGNQFIPVGGE 65
           S+ L +V++L +   L V+ +L  K++VHIINGF N T+GAHC+SKDDDLG Q IPV G+
Sbjct: 7   SFKLFMVLTLCMGQSL-VTPSLIPKYHVHIINGFQNETLGAHCKSKDDDLGIQQIPVHGD 66

Query: 66  FHWNFKTNLFGTTLFYCHLWWIEGHITYLAY-WHDDGFENDICRDGHCRWKAEAQGISSF 125
           F W+F  N  G+TLF+C LWW  G   + A+   D  F N+ C    C WKA   GI  +
Sbjct: 67  FEWHFHVNFIGSTLFFCRLWWSGGDKVFDAFVAADKRFINNDCGPSDCWWKALEDGIYLY 126

Query: 126 NVRQDVYQLQYKWQ 139
           +++ + Y+ +Y W+
Sbjct: 127 SIKHEEYRRKYLWE 139

BLAST of MS002497 vs. NCBI nr
Match: XP_042974627.1 (uncharacterized protein LOC122306260 [Carya illinoinensis])

HSP 1 Score: 124.8 bits (312), Expect = 5.9e-25
Identity = 60/134 (44.78%), Postives = 86/134 (64.18%), Query Frame = 0

Query: 6   SYILLLVMSLFLSTELQVSDALFDKFYVHIINGFNNATIGAHCRSKDDDLGNQFIPVGGE 65
           S+ L +V++L +   L V+ +L  K++VHIINGF N T+GAHC+SKDDDLG Q IPV G+
Sbjct: 135 SFKLFMVLTLCMGQSL-VTPSLIPKYHVHIINGFQNETLGAHCKSKDDDLGIQQIPVHGD 194

Query: 66  FHWNFKTNLFGTTLFYCHLWWIEGHITYLAY-WHDDGFENDICRDGHCRWKAEAQGISSF 125
           F W+F  N  G+TLF+C LWW  G   + A+   D  F N+ C    C WKA   GI  +
Sbjct: 195 FEWHFHVNFIGSTLFFCRLWWSGGDKVFDAFVAADKRFINNDCGPSDCWWKALEDGIYLY 254

Query: 126 NVRQDVYQLQYKWQ 139
           +++ + Y+ +Y W+
Sbjct: 255 SIKHEEYRRKYLWE 267

BLAST of MS002497 vs. ExPASy Swiss-Prot
Match: F4JLQ5 (S-protein homolog 2 OS=Arabidopsis thaliana OX=3702 GN=SPH2 PE=3 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 2.7e-12
Identity = 48/156 (30.77%), Postives = 69/156 (44.23%), Query Frame = 0

Query: 1   MGIHKSYILLLVMSLFLSTELQVSDALFD-----------------KFYVHIINGF-NNA 60
           M I K Y+ L ++ +F++T+L  +D   D                 K  V I N   N  
Sbjct: 1   MDIPKQYLSLFILIIFITTKLSQADHKNDIPVPNDPSSTNSVFPTSKRTVEINNDLGNQL 60

Query: 61  TIGAHCRSKDDDLGNQFIPVGGEFHWNFKTNLFGTTLFYCHLWW-IEGHITYLAYWHDDG 120
           T+  HC+SKDDDLGN+ +  G  + ++F    FG TL++C   W  E H   +   H D 
Sbjct: 61  TLLYHCKSKDDDLGNRTLQPGESWSFSFGRQFFGRTLYFCSFSWPNESHSFDIYKDHRDS 120

Query: 121 FENDICRDGHCRWKAEAQGISSFNVRQDVYQLQYKW 138
             ++ C    C WK    G   FN     + L Y W
Sbjct: 121 GGDNKCESDRCVWKIRRNGPCRFNDETKQFDLCYPW 156

BLAST of MS002497 vs. ExPASy Swiss-Prot
Match: Q40975 (Self-incompatibility protein S1 OS=Papaver rhoeas OX=33128 GN=S1 PE=1 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 3.8e-11
Identity = 45/134 (33.58%), Postives = 68/134 (50.75%), Query Frame = 0

Query: 7   YILLLVMSLFLSTELQVSDALFDKFYVHIINGFNNA-TIGAHCRSKDDDLGNQFIPVGGE 66
           + +++++S FLS     S   F    V I+N   N  +IG HCRSKD+DL NQ +  G +
Sbjct: 4   FYVIVLLSFFLSK----SSGFFPVIEVRIMNRRGNGRSIGIHCRSKDNDLQNQTVTSGHD 63

Query: 67  FHWNFKTNLFGTTLFYCHLWWIE----GHITYLAYWHDDGFENDICRDGHCRWKAEAQGI 126
             ++F+ + F TT FYC L W +    G  +Y A   DDG     C    C WK    G+
Sbjct: 64  MSFSFREDFFHTTHFYCDLQWDKETKFGFYSYQAKRDDDG----RC-SSQCLWKIMDDGL 123

Query: 127 SSFNVRQDVYQLQY 136
             F+    ++Q+ +
Sbjct: 124 YGFDQEHQIWQIYH 128

BLAST of MS002497 vs. ExPASy Swiss-Prot
Match: F4JLS0 (S-protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=SPH1 PE=2 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 9.5e-10
Identity = 43/149 (28.86%), Postives = 68/149 (45.64%), Query Frame = 0

Query: 1   MGIHKSYILLLVMSLFLSTELQV-------SDALFDK---FYVHIINGFNNA-TIGAHCR 60
           M   K ++L +  SL L+ +  V        D +  K   + V ++NG     T+  HC+
Sbjct: 1   MNCIKQFLLAICFSLALTCQDHVLVGGTTTRDIIVPKISEWQVTVVNGLTTGETLFIHCK 60

Query: 61  SKDDDLGNQFIPVGGEFHWNFKTNLFGTTLFYCHLWWIEGHITYLAYWHDDGFENDICRD 120
           SK+DDLG   +     F WNF  N+  +T F+C++    GH+    +W DD      C  
Sbjct: 61  SKEDDLGEINLKFRNRFSWNFGENMLHSTFFWCYMNKDNGHMNVNVFW-DDVILFHRCGW 120

Query: 121 GHCRWKAEAQGISSFNVRQDVYQLQYKWQ 139
            +C W A+  G+  +N       L  KW+
Sbjct: 121 KNCIWTAKTDGLYLWNSASGEDVLSRKWE 148

BLAST of MS002497 vs. ExPASy Swiss-Prot
Match: Q9FMQ4 (S-protein homolog 3 OS=Arabidopsis thaliana OX=3702 GN=SPH3 PE=2 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 1.6e-09
Identity = 41/137 (29.93%), Postives = 60/137 (43.80%), Query Frame = 0

Query: 3   IHKSYILLLVMSLFLSTELQVSDALFDKFYVHIINGFNNA-TIGAHCRSKDDDLGNQFIP 62
           +H   I LL+   F   +            V I N   +  T+  HC+S DDDLG + + 
Sbjct: 9   VHVVVIYLLIKIAFSQVKTDFDVNWSTSKMVRITNRLGDGLTLNLHCKSADDDLGLKILA 68

Query: 63  VGGEFHWNFKTNLFGTTLFYCHLWWIEGHITYLAYWHD-DGFENDICRDGHCRWKAEAQG 122
             G + + F+T++ GTTLFYCH  W      +  Y  D DG  + I    +C W    QG
Sbjct: 69  PNGSWSFKFRTSIVGTTLFYCHFTWPGQSKRFDIYDDDRDGVRSHISCI-NCIWDISIQG 128

Query: 123 ISSFNVRQDVYQLQYKW 138
              F+     + + Y W
Sbjct: 129 PCMFSESDHAFNICYDW 144

BLAST of MS002497 vs. ExPASy Swiss-Prot
Match: Q2HQ46 (S-protein homolog 74 OS=Arabidopsis thaliana OX=3702 GN=SPH74 PE=2 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 3.6e-09
Identity = 41/138 (29.71%), Postives = 69/138 (50.00%), Query Frame = 0

Query: 7   YILLLVMSLFLSTELQVSDALFDK---FYVHIINGFNNA-TIGAHCRSKDDDLGNQFIPV 66
           Y++L      L+ +    D +  K   + V + NG     T+  HC+SK++DLG+  +  
Sbjct: 14  YLVLTCQDHVLARDTTTRDIVVPKISEWQVTVANGLTTGETLFIHCKSKENDLGDINLKF 73

Query: 67  GGEFHWNFKTNLFGTTLFYCHLWWIEGHITYLAYWHDDGFENDICRDGHCRWKAEAQGIS 126
              F WNF  N+  +TLF+C++   +GH+    +W DD      C   +C W A+  G+ 
Sbjct: 74  LDRFSWNFGENMLHSTLFWCYMSKDDGHMNVKVFW-DDVILFHRCDWKNCVWTAKNDGLY 133

Query: 127 SFN--VRQDVYQLQYKWQ 139
            +N  + +DV  L  KW+
Sbjct: 134 LWNSAIGEDV--LSEKWK 148

BLAST of MS002497 vs. ExPASy TrEMBL
Match: A0A0A0K4G8 (S-protein homolog OS=Cucumis sativus OX=3659 GN=Csa_7G333910 PE=3 SV=1)

HSP 1 Score: 227.6 bits (579), Expect = 3.1e-56
Identity = 104/140 (74.29%), Postives = 116/140 (82.86%), Query Frame = 0

Query: 1   MGIHKSYILLLVMSLFLSTEL-QVSDALFDKFYVHIINGFNNATIGAHCRSKDDDLGNQF 60
           MGI KSYI+LLV+S+ LS EL QVS ALF+KFYVHIINGF+NATIGAHCRSKDDDLGNQF
Sbjct: 1   MGIRKSYIILLVISIALSAELTQVSSALFEKFYVHIINGFDNATIGAHCRSKDDDLGNQF 60

Query: 61  IPVGGEFHWNFKTNLFGTTLFYCHLWWIEGHITYLAYWHDDGFENDICRDGHCRWKAEAQ 120
           IPV  EFHWNF+TN  GTTLFYCH+WWI GHITY AYWH++ FE   C DGHCRWKA+ Q
Sbjct: 61  IPVNAEFHWNFRTNFLGTTLFYCHVWWIGGHITYKAYWHENDFELSRCGDGHCRWKADPQ 120

Query: 121 GISSFNVRQDVYQLQYKWQH 140
           G+SS+ V Q  Y L Y WQH
Sbjct: 121 GVSSYFVDQKRYSLTYLWQH 140

BLAST of MS002497 vs. ExPASy TrEMBL
Match: A0A5A7UAS5 (S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1737G001420 PE=3 SV=1)

HSP 1 Score: 218.0 bits (554), Expect = 2.5e-53
Identity = 100/140 (71.43%), Postives = 114/140 (81.43%), Query Frame = 0

Query: 1   MGIHKSYILLLVMSLFLSTEL-QVSDALFDKFYVHIINGFNNATIGAHCRSKDDDLGNQF 60
           MG  KS+I+LLV+S  LSTEL QVS+A FDKFYVHIINGF+NATIGAHCRSKDDDL NQF
Sbjct: 1   MGNRKSFIILLVISTALSTELTQVSNAFFDKFYVHIINGFDNATIGAHCRSKDDDLSNQF 60

Query: 61  IPVGGEFHWNFKTNLFGTTLFYCHLWWIEGHITYLAYWHDDGFENDICRDGHCRWKAEAQ 120
           IPV GEF W+F+TN FGTTLFYCH+WWI G ITY AYWH++ FE  +C DGHCRWKA+ Q
Sbjct: 61  IPVNGEFQWHFRTNFFGTTLFYCHVWWIGGQITYKAYWHENDFELSVCGDGHCRWKADPQ 120

Query: 121 GISSFNVRQDVYQLQYKWQH 140
           GIS + V Q  Y L Y W+H
Sbjct: 121 GISCYFVDQKRYALTYLWEH 140

BLAST of MS002497 vs. ExPASy TrEMBL
Match: A0A061DMI7 (S-protein homolog OS=Theobroma cacao OX=3641 GN=TCM_003121 PE=3 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 8.3e-25
Identity = 57/134 (42.54%), Postives = 86/134 (64.18%), Query Frame = 0

Query: 5   KSYILLLVMSLFLSTELQVSDALFDKFYVHIINGFN-NATIGAHCRSKDDDLGNQFIPVG 64
           ++ +++LV+ L +S  L V+ ++ ++  VH+INGF+ N T+ AHC+SKDDDLG   IPV 
Sbjct: 5   QNLMIMLVLILCMSQSL-VTYSIMNRCRVHVINGFSTNETLEAHCKSKDDDLGLHHIPVH 64

Query: 65  GEFHWNFKTNLFGTTLFYCHLWWIEGHITYLAYWHDDGFENDICRDGHCRWKAEAQGISS 124
           GEF W F+T+ F  T F CH+WW  G  T   +W DD F  + C  G+CRW+++  GI  
Sbjct: 65  GEFQWKFRTDFFSRTRFSCHMWWSGGQKTLDVFWVDDKFIENECGGGNCRWRSQNDGIYL 124

Query: 125 FNVRQDVYQLQYKW 138
           ++     Y+ +YKW
Sbjct: 125 YSFVHKQYRFKYKW 137

BLAST of MS002497 vs. ExPASy TrEMBL
Match: A0A5N6QIK7 (S-protein homolog OS=Carpinus fangiana OX=176857 GN=FH972_002526 PE=3 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 1.8e-24
Identity = 55/130 (42.31%), Postives = 82/130 (63.08%), Query Frame = 0

Query: 9   LLLVMSLFLSTELQVSDALFDKFYVHIINGFNNATIGAHCRSKDDDLGNQFIPVGGEFHW 68
           L+LV+ L++S +   + +L  K+ V I NGF N T+   C+S+DDDLG Q IPV GEF W
Sbjct: 9   LMLVLILYMS-QPSTTYSLLKKYGVDIFNGFQNQTLSIRCQSEDDDLGIQHIPVNGEFQW 68

Query: 69  NFKTNLFGTTLFYCHLWWIEGHITYLAYWHDDGFENDICRDGHCRWKAEAQGISSFNVRQ 128
           +F+ N +GTTL++C++WW  GH     +W D+ F  D C D  CRW  +  GI  +  + 
Sbjct: 69  HFRINYWGTTLYFCYMWWSGGHRRLDVFWADNKFIVDDCGDSDCRWMGKEDGIYLYISKH 128

Query: 129 DVYQLQYKWQ 139
           + Y+LQ +W+
Sbjct: 129 NEYRLQSRWE 137

BLAST of MS002497 vs. ExPASy TrEMBL
Match: A0A5N6QH10 (S-protein homolog OS=Carpinus fangiana OX=176857 GN=FH972_002525 PE=3 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 2.4e-24
Identity = 54/130 (41.54%), Postives = 82/130 (63.08%), Query Frame = 0

Query: 9   LLLVMSLFLSTELQVSDALFDKFYVHIINGFNNATIGAHCRSKDDDLGNQFIPVGGEFHW 68
           L+LV+ L++S +   + +L  K+ V + NGF N T+   C+S+DDDLG Q IPV GEF W
Sbjct: 9   LMLVLILYMS-QPSTTYSLLKKYGVDVFNGFQNQTLSIRCQSEDDDLGIQHIPVNGEFQW 68

Query: 69  NFKTNLFGTTLFYCHLWWIEGHITYLAYWHDDGFENDICRDGHCRWKAEAQGISSFNVRQ 128
           +F+ N +GTTL++C++WW  GH     +W D+ F  D C D  CRW  +  GI  +  + 
Sbjct: 69  HFRINYWGTTLYFCYMWWSGGHRRLDVFWADNKFIVDDCGDSDCRWMGKEDGIYLYISKH 128

Query: 129 DVYQLQYKWQ 139
           + Y+LQ +W+
Sbjct: 129 NEYRLQSRWE 137

BLAST of MS002497 vs. TAIR 10
Match: AT4G16195.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 73.2 bits (178), Expect = 1.9e-13
Identity = 48/156 (30.77%), Postives = 69/156 (44.23%), Query Frame = 0

Query: 1   MGIHKSYILLLVMSLFLSTELQVSDALFD-----------------KFYVHIINGF-NNA 60
           M I K Y+ L ++ +F++T+L  +D   D                 K  V I N   N  
Sbjct: 1   MDIPKQYLSLFILIIFITTKLSQADHKNDIPVPNDPSSTNSVFPTSKRTVEINNDLGNQL 60

Query: 61  TIGAHCRSKDDDLGNQFIPVGGEFHWNFKTNLFGTTLFYCHLWW-IEGHITYLAYWHDDG 120
           T+  HC+SKDDDLGN+ +  G  + ++F    FG TL++C   W  E H   +   H D 
Sbjct: 61  TLLYHCKSKDDDLGNRTLQPGESWSFSFGRQFFGRTLYFCSFSWPNESHSFDIYKDHRDS 120

Query: 121 FENDICRDGHCRWKAEAQGISSFNVRQDVYQLQYKW 138
             ++ C    C WK    G   FN     + L Y W
Sbjct: 121 GGDNKCESDRCVWKIRRNGPCRFNDETKQFDLCYPW 156

BLAST of MS002497 vs. TAIR 10
Match: AT4G16295.1 (S-protein homologue 1 )

HSP 1 Score: 64.7 bits (156), Expect = 6.7e-11
Identity = 43/149 (28.86%), Postives = 68/149 (45.64%), Query Frame = 0

Query: 1   MGIHKSYILLLVMSLFLSTELQV-------SDALFDK---FYVHIINGFNNA-TIGAHCR 60
           M   K ++L +  SL L+ +  V        D +  K   + V ++NG     T+  HC+
Sbjct: 1   MNCIKQFLLAICFSLALTCQDHVLVGGTTTRDIIVPKISEWQVTVVNGLTTGETLFIHCK 60

Query: 61  SKDDDLGNQFIPVGGEFHWNFKTNLFGTTLFYCHLWWIEGHITYLAYWHDDGFENDICRD 120
           SK+DDLG   +     F WNF  N+  +T F+C++    GH+    +W DD      C  
Sbjct: 61  SKEDDLGEINLKFRNRFSWNFGENMLHSTFFWCYMNKDNGHMNVNVFW-DDVILFHRCGW 120

Query: 121 GHCRWKAEAQGISSFNVRQDVYQLQYKWQ 139
            +C W A+  G+  +N       L  KW+
Sbjct: 121 KNCIWTAKTDGLYLWNSASGEDVLSRKWE 148

BLAST of MS002497 vs. TAIR 10
Match: AT5G12060.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 63.9 bits (154), Expect = 1.1e-10
Identity = 41/137 (29.93%), Postives = 60/137 (43.80%), Query Frame = 0

Query: 3   IHKSYILLLVMSLFLSTELQVSDALFDKFYVHIINGFNNA-TIGAHCRSKDDDLGNQFIP 62
           +H   I LL+   F   +            V I N   +  T+  HC+S DDDLG + + 
Sbjct: 9   VHVVVIYLLIKIAFSQVKTDFDVNWSTSKMVRITNRLGDGLTLNLHCKSADDDLGLKILA 68

Query: 63  VGGEFHWNFKTNLFGTTLFYCHLWWIEGHITYLAYWHD-DGFENDICRDGHCRWKAEAQG 122
             G + + F+T++ GTTLFYCH  W      +  Y  D DG  + I    +C W    QG
Sbjct: 69  PNGSWSFKFRTSIVGTTLFYCHFTWPGQSKRFDIYDDDRDGVRSHISCI-NCIWDISIQG 128

Query: 123 ISSFNVRQDVYQLQYKW 138
              F+     + + Y W
Sbjct: 129 PCMFSESDHAFNICYDW 144

BLAST of MS002497 vs. TAIR 10
Match: AT4G29035.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 62.8 bits (151), Expect = 2.6e-10
Identity = 41/138 (29.71%), Postives = 69/138 (50.00%), Query Frame = 0

Query: 7   YILLLVMSLFLSTELQVSDALFDK---FYVHIINGFNNA-TIGAHCRSKDDDLGNQFIPV 66
           Y++L      L+ +    D +  K   + V + NG     T+  HC+SK++DLG+  +  
Sbjct: 14  YLVLTCQDHVLARDTTTRDIVVPKISEWQVTVANGLTTGETLFIHCKSKENDLGDINLKF 73

Query: 67  GGEFHWNFKTNLFGTTLFYCHLWWIEGHITYLAYWHDDGFENDICRDGHCRWKAEAQGIS 126
              F WNF  N+  +TLF+C++   +GH+    +W DD      C   +C W A+  G+ 
Sbjct: 74  LDRFSWNFGENMLHSTLFWCYMSKDDGHMNVKVFW-DDVILFHRCDWKNCVWTAKNDGLY 133

Query: 127 SFN--VRQDVYQLQYKWQ 139
            +N  + +DV  L  KW+
Sbjct: 134 LWNSAIGEDV--LSEKWK 148

BLAST of MS002497 vs. TAIR 10
Match: AT3G17080.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 59.3 bits (142), Expect = 2.8e-09
Identity = 41/140 (29.29%), Postives = 62/140 (44.29%), Query Frame = 0

Query: 1   MGIHKSYILLLVMSLFLSTELQVSDALFDKFYVHIINGFNNA-TIGAHCRSKDDDLGNQF 60
           MG  ++ +L  VM +F+S  +  +        V I N       +  HC+S++DDLG Q 
Sbjct: 1   MGSLETCLLFFVMVMFMSAIMSRAST-----SVVIYNDLGGGLPLRHHCKSREDDLGYQS 60

Query: 61  IPVGGEFHWNFKTNLFGTTLFYCHL-WWIEGHI-TYLAYWHDDGFENDICRDGHCRWKAE 120
           +  G  + + F  ++FG TLFYC   W  E HI        D  F+   C+   C WK  
Sbjct: 61  LAPGRSWSFGFTPDIFGRTLFYCRFSWGAESHIFDIYKQSRDKEFQEFGCK--KCEWKIR 120

Query: 121 AQGISSFNVRQDVYQLQYKW 138
             G   F  +  ++   Y W
Sbjct: 121 KNGPCKFYKKTGMFDHCYSW 133

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0050599.15.1e-5371.43pumilio-like protein 15-like [Cucumis melo var. makuwa] >TYK07841.1 pumilio-like... [more]
XP_031745088.13.3e-5275.97S-protein homolog 3-like [Cucumis sativus][more]
KAE8646226.13.3e-5275.97hypothetical protein Csa_016670 [Cucumis sativus][more]
KAG2712057.15.9e-2544.78hypothetical protein I3760_04G107500 [Carya illinoinensis] >KAG6717558.1 hypothe... [more]
XP_042974627.15.9e-2544.78uncharacterized protein LOC122306260 [Carya illinoinensis][more]
Match NameE-valueIdentityDescription
F4JLQ52.7e-1230.77S-protein homolog 2 OS=Arabidopsis thaliana OX=3702 GN=SPH2 PE=3 SV=1[more]
Q409753.8e-1133.58Self-incompatibility protein S1 OS=Papaver rhoeas OX=33128 GN=S1 PE=1 SV=1[more]
F4JLS09.5e-1028.86S-protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=SPH1 PE=2 SV=1[more]
Q9FMQ41.6e-0929.93S-protein homolog 3 OS=Arabidopsis thaliana OX=3702 GN=SPH3 PE=2 SV=1[more]
Q2HQ463.6e-0929.71S-protein homolog 74 OS=Arabidopsis thaliana OX=3702 GN=SPH74 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
A0A0A0K4G83.1e-5674.29S-protein homolog OS=Cucumis sativus OX=3659 GN=Csa_7G333910 PE=3 SV=1[more]
A0A5A7UAS52.5e-5371.43S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1737G0... [more]
A0A061DMI78.3e-2542.54S-protein homolog OS=Theobroma cacao OX=3641 GN=TCM_003121 PE=3 SV=1[more]
A0A5N6QIK71.8e-2442.31S-protein homolog OS=Carpinus fangiana OX=176857 GN=FH972_002526 PE=3 SV=1[more]
A0A5N6QH102.4e-2441.54S-protein homolog OS=Carpinus fangiana OX=176857 GN=FH972_002525 PE=3 SV=1[more]
Match NameE-valueIdentityDescription
AT4G16195.11.9e-1330.77Plant self-incompatibility protein S1 family [more]
AT4G16295.16.7e-1128.86S-protein homologue 1 [more]
AT5G12060.11.1e-1029.93Plant self-incompatibility protein S1 family [more]
AT4G29035.12.6e-1029.71Plant self-incompatibility protein S1 family [more]
AT3G17080.12.8e-0929.29Plant self-incompatibility protein S1 family [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010264Plant self-incompatibility S1PFAMPF05938Self-incomp_S1coord: 33..137
e-value: 1.8E-23
score: 83.0
IPR010264Plant self-incompatibility S1PANTHERPTHR31232FAMILY NOT NAMEDcoord: 23..123
NoneNo IPR availablePANTHERPTHR31232:SF59SUBFAMILY NOT NAMEDcoord: 23..123

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MS002497.1MS002497.1mRNA