Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
GACATGTCTTTATCGCAGTGGCTTATAATGAGATATAGTATTTTTAACTTGGAAGTTATTCAAGCGGCTGTAAAGTTGGCCAAACAAGAGAAAGCTTTTGTGGTATATTCCTTGGCAAACCTCTGTGTGCTTTTTGTTTTGAAGAAGAGACTTTTGTATTATTTTAAAAAATGTGTTTAGAGGTAAATAAAGTAGCTCACATCTCTATCTTTGGCCAGATGGTTTGGGATTTTAGATTACCTCTTCTCCAGCTACTGGAGTTTGGGGATATAGACCTTGGCTTTGCCAACGAGAATGAAGCAAAAGAGTTGATAGGG
mRNA sequence
GACATGTCTTTATCGCAGTGGCTTATAATGAGATATAGTATTTTTAACTTGGAAGTTATTCAAGCGGCTGTAAAGTTGGCCAAACAAGAGAAAGCTTTTGTGGTATATTCCTTGGCAAACCTCTGTATGGTTTGGGATTTTAGATTACCTCTTCTCCAGCTACTGGAGTTTGGGGATATAGACCTTGGCTTTGCCAACGAGAATGAAGCAAAAGAGTTGATAGGG
Coding sequence (CDS)
GACATGTCTTTATCGCAGTGGCTTATAATGAGATATAGTATTTTTAACTTGGAAGTTATTCAAGCGGCTGTAAAGTTGGCCAAACAAGAGAAAGCTTTTGTGGTATATTCCTTGGCAAACCTCTGTATGGTTTGGGATTTTAGATTACCTCTTCTCCAGCTACTGGAGTTTGGGGATATAGACCTTGGCTTTGCCAACGAGAATGAAGCAAAAGAGTTGATAGGG
Protein sequence
DMSLSQWLIMRYSIFNLEVIQAAVKLAKQEKAFVVYSLANLCMVWDFRLPLLQLLEFGDIDLGFANENEAKELIG
Homology
BLAST of MS000706 vs. NCBI nr
Match:
XP_022144332.1 (uncharacterized protein LOC111014039 [Momordica charantia])
HSP 1 Score: 109.8 bits (273), Expect = 1.1e-20
Identity = 58/75 (77.33%), Postives = 63/75 (84.00%), Query Frame = 0
Query: 1 DMSLSQWLIMRYSIFNLEVIQAAVKLAKQEKAFVVYSLANLCMVWDFRLPLLQLLEFGDI 60
D S+WL+MRYSIFNLEVIQAAVK+AKQEK FV LA+ MV DFRLPLLQLLE GDI
Sbjct: 173 DFKGSKWLVMRYSIFNLEVIQAAVKMAKQEKVFVSLDLASFEMVRDFRLPLLQLLESGDI 232
Query: 61 DLGFANENEAKELIG 76
DL FANE+EAKELIG
Sbjct: 233 DLCFANEDEAKELIG 247
BLAST of MS000706 vs. NCBI nr
Match:
XP_038886551.1 (uncharacterized sugar kinase slr0537 [Benincasa hispida])
HSP 1 Score: 107.8 bits (268), Expect = 4.0e-20
Identity = 56/75 (74.67%), Postives = 63/75 (84.00%), Query Frame = 0
Query: 1 DMSLSQWLIMRYSIFNLEVIQAAVKLAKQEKAFVVYSLANLCMVWDFRLPLLQLLEFGDI 60
D S+WL+MRYSIFN+EVI+AAVK+AKQEK FV LA+ MV DFRLPLLQLLE GDI
Sbjct: 172 DFKGSKWLVMRYSIFNMEVIEAAVKMAKQEKVFVSLDLASFEMVRDFRLPLLQLLESGDI 231
Query: 61 DLGFANENEAKELIG 76
DL FANE+EAKELIG
Sbjct: 232 DLCFANEDEAKELIG 246
BLAST of MS000706 vs. NCBI nr
Match:
XP_004152687.1 (uncharacterized protein LOC101214597 [Cucumis sativus] >KGN62617.1 hypothetical protein Csa_021844 [Cucumis sativus])
HSP 1 Score: 105.5 bits (262), Expect = 2.0e-19
Identity = 55/74 (74.32%), Postives = 62/74 (83.78%), Query Frame = 0
Query: 1 DMSLSQWLIMRYSIFNLEVIQAAVKLAKQEKAFVVYSLANLCMVWDFRLPLLQLLEFGDI 60
D S+WL+MRYSIFN+EVI+AAVK+AKQEK FV LA+ MV DFRLPLLQLLE GDI
Sbjct: 172 DFKGSKWLVMRYSIFNIEVIEAAVKMAKQEKVFVSLDLASFEMVRDFRLPLLQLLESGDI 231
Query: 61 DLGFANENEAKELI 75
DL FANE+EAKELI
Sbjct: 232 DLCFANEDEAKELI 245
BLAST of MS000706 vs. NCBI nr
Match:
XP_022951670.1 (uncharacterized protein LOC111454413 [Cucurbita moschata] >KAG6585583.1 hypothetical protein SDJN03_18316, partial [Cucurbita argyrosperma subsp. sororia] >KAG7020498.1 hypothetical protein SDJN02_17183, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 104.4 bits (259), Expect = 4.4e-19
Identity = 54/75 (72.00%), Postives = 62/75 (82.67%), Query Frame = 0
Query: 1 DMSLSQWLIMRYSIFNLEVIQAAVKLAKQEKAFVVYSLANLCMVWDFRLPLLQLLEFGDI 60
D ++WL+MRYSIFN+EVI+AAVK+AKQEK FV LA+ MV DFR PLLQLLE GDI
Sbjct: 172 DFKGAKWLVMRYSIFNMEVIEAAVKMAKQEKVFVSLDLASFEMVRDFRSPLLQLLESGDI 231
Query: 61 DLGFANENEAKELIG 76
DL FANE+EAKELIG
Sbjct: 232 DLCFANEDEAKELIG 246
BLAST of MS000706 vs. NCBI nr
Match:
XP_023538348.1 (uncharacterized protein LOC111799162 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 104.4 bits (259), Expect = 4.4e-19
Identity = 54/75 (72.00%), Postives = 62/75 (82.67%), Query Frame = 0
Query: 1 DMSLSQWLIMRYSIFNLEVIQAAVKLAKQEKAFVVYSLANLCMVWDFRLPLLQLLEFGDI 60
D ++WL+MRYSIFN+EVI+AAVK+AKQEK FV LA+ MV DFR PLLQLLE GDI
Sbjct: 172 DFKGAKWLVMRYSIFNMEVIEAAVKMAKQEKVFVSLDLASFEMVRDFRSPLLQLLESGDI 231
Query: 61 DLGFANENEAKELIG 76
DL FANE+EAKELIG
Sbjct: 232 DLCFANEDEAKELIG 246
BLAST of MS000706 vs. ExPASy TrEMBL
Match:
A0A6J1CTD9 (uncharacterized protein LOC111014039 OS=Momordica charantia OX=3673 GN=LOC111014039 PE=4 SV=1)
HSP 1 Score: 109.8 bits (273), Expect = 5.1e-21
Identity = 58/75 (77.33%), Postives = 63/75 (84.00%), Query Frame = 0
Query: 1 DMSLSQWLIMRYSIFNLEVIQAAVKLAKQEKAFVVYSLANLCMVWDFRLPLLQLLEFGDI 60
D S+WL+MRYSIFNLEVIQAAVK+AKQEK FV LA+ MV DFRLPLLQLLE GDI
Sbjct: 173 DFKGSKWLVMRYSIFNLEVIQAAVKMAKQEKVFVSLDLASFEMVRDFRLPLLQLLESGDI 232
Query: 61 DLGFANENEAKELIG 76
DL FANE+EAKELIG
Sbjct: 233 DLCFANEDEAKELIG 247
BLAST of MS000706 vs. ExPASy TrEMBL
Match:
A0A0A0LPB8 (PfkB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G361810 PE=4 SV=1)
HSP 1 Score: 105.5 bits (262), Expect = 9.6e-20
Identity = 55/74 (74.32%), Postives = 62/74 (83.78%), Query Frame = 0
Query: 1 DMSLSQWLIMRYSIFNLEVIQAAVKLAKQEKAFVVYSLANLCMVWDFRLPLLQLLEFGDI 60
D S+WL+MRYSIFN+EVI+AAVK+AKQEK FV LA+ MV DFRLPLLQLLE GDI
Sbjct: 172 DFKGSKWLVMRYSIFNIEVIEAAVKMAKQEKVFVSLDLASFEMVRDFRLPLLQLLESGDI 231
Query: 61 DLGFANENEAKELI 75
DL FANE+EAKELI
Sbjct: 232 DLCFANEDEAKELI 245
BLAST of MS000706 vs. ExPASy TrEMBL
Match:
A0A6J1GJH7 (uncharacterized protein LOC111454413 OS=Cucurbita moschata OX=3662 GN=LOC111454413 PE=4 SV=1)
HSP 1 Score: 104.4 bits (259), Expect = 2.1e-19
Identity = 54/75 (72.00%), Postives = 62/75 (82.67%), Query Frame = 0
Query: 1 DMSLSQWLIMRYSIFNLEVIQAAVKLAKQEKAFVVYSLANLCMVWDFRLPLLQLLEFGDI 60
D ++WL+MRYSIFN+EVI+AAVK+AKQEK FV LA+ MV DFR PLLQLLE GDI
Sbjct: 172 DFKGAKWLVMRYSIFNMEVIEAAVKMAKQEKVFVSLDLASFEMVRDFRSPLLQLLESGDI 231
Query: 61 DLGFANENEAKELIG 76
DL FANE+EAKELIG
Sbjct: 232 DLCFANEDEAKELIG 246
BLAST of MS000706 vs. ExPASy TrEMBL
Match:
A0A6J1K2P0 (uncharacterized protein LOC111491853 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111491853 PE=4 SV=1)
HSP 1 Score: 103.2 bits (256), Expect = 4.8e-19
Identity = 54/75 (72.00%), Postives = 63/75 (84.00%), Query Frame = 0
Query: 1 DMSLSQWLIMRYSIFNLEVIQAAVKLAKQEKAFVVYSLANLCMVWDFRLPLLQLLEFGDI 60
D S+WL+MRYSIF+LEVIQAAVK+AKQE+ FV LA+ MV +FRLPLL+LLE GDI
Sbjct: 147 DFKGSKWLVMRYSIFSLEVIQAAVKMAKQERVFVSLDLASFEMVRNFRLPLLKLLESGDI 206
Query: 61 DLGFANENEAKELIG 76
DL FANE+EAKELIG
Sbjct: 207 DLCFANEDEAKELIG 221
BLAST of MS000706 vs. ExPASy TrEMBL
Match:
A0A6J1K5H0 (uncharacterized protein LOC111491853 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111491853 PE=4 SV=1)
HSP 1 Score: 103.2 bits (256), Expect = 4.8e-19
Identity = 54/75 (72.00%), Postives = 63/75 (84.00%), Query Frame = 0
Query: 1 DMSLSQWLIMRYSIFNLEVIQAAVKLAKQEKAFVVYSLANLCMVWDFRLPLLQLLEFGDI 60
D S+WL+MRYSIF+LEVIQAAVK+AKQE+ FV LA+ MV +FRLPLL+LLE GDI
Sbjct: 171 DFKGSKWLVMRYSIFSLEVIQAAVKMAKQERVFVSLDLASFEMVRNFRLPLLKLLESGDI 230
Query: 61 DLGFANENEAKELIG 76
DL FANE+EAKELIG
Sbjct: 231 DLCFANEDEAKELIG 245
BLAST of MS000706 vs. TAIR 10
Match:
AT1G19600.1 (pfkB-like carbohydrate kinase family protein )
HSP 1 Score: 74.3 bits (181), Expect = 4.6e-14
Identity = 39/74 (52.70%), Postives = 54/74 (72.97%), Query Frame = 0
Query: 1 DMSLSQWLIMRYSIFNLEVIQAAVKLAKQEKAFVVYSLANLCMVWDFRLPLLQLLEFGDI 60
D + S+WL++RY++ NL+VIQAA++ AKQE V LA+ MV + + L QLLE G+I
Sbjct: 162 DFTGSKWLVLRYAVLNLQVIQAAIRFAKQEGLSVSLDLASFEMVRNSKSELRQLLESGNI 221
Query: 61 DLGFANENEAKELI 75
DL FANE+EA EL+
Sbjct: 222 DLCFANEDEAAELL 235
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022144332.1 | 1.1e-20 | 77.33 | uncharacterized protein LOC111014039 [Momordica charantia] | [more] |
XP_038886551.1 | 4.0e-20 | 74.67 | uncharacterized sugar kinase slr0537 [Benincasa hispida] | [more] |
XP_004152687.1 | 2.0e-19 | 74.32 | uncharacterized protein LOC101214597 [Cucumis sativus] >KGN62617.1 hypothetical ... | [more] |
XP_022951670.1 | 4.4e-19 | 72.00 | uncharacterized protein LOC111454413 [Cucurbita moschata] >KAG6585583.1 hypothet... | [more] |
XP_023538348.1 | 4.4e-19 | 72.00 | uncharacterized protein LOC111799162 [Cucurbita pepo subsp. pepo] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1CTD9 | 5.1e-21 | 77.33 | uncharacterized protein LOC111014039 OS=Momordica charantia OX=3673 GN=LOC111014... | [more] |
A0A0A0LPB8 | 9.6e-20 | 74.32 | PfkB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G361810 PE=4 S... | [more] |
A0A6J1GJH7 | 2.1e-19 | 72.00 | uncharacterized protein LOC111454413 OS=Cucurbita moschata OX=3662 GN=LOC1114544... | [more] |
A0A6J1K2P0 | 4.8e-19 | 72.00 | uncharacterized protein LOC111491853 isoform X2 OS=Cucurbita maxima OX=3661 GN=L... | [more] |
A0A6J1K5H0 | 4.8e-19 | 72.00 | uncharacterized protein LOC111491853 isoform X1 OS=Cucurbita maxima OX=3661 GN=L... | [more] |
Match Name | E-value | Identity | Description | |
AT1G19600.1 | 4.6e-14 | 52.70 | pfkB-like carbohydrate kinase family protein | [more] |