MC11g_new0488 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC11g_new0488
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Unknown protein
Location	MC11: 19055193 .. 19056653 (-)
RNA-Seq Expression	MC11g_new0488
Synteny	MC11g_new0488

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CATAACGGTTAACGACTTTTGTGAAGTGATTTTCAAGAATCTGGTGGCGTTTGAGGTGGAGGCCAAGCTGAAGCCGGCTAGCTTTTCGCATTACGTGATGCTGATGAGTGGGCTTGTTTGGGGAAGAGAATACCCTGGACACGTGGAGGACCCCTATTGGTGCTCCAAGATGACTCATGAGTCATGCCTAGCTCGGACCGCCGAGATCACCACCGCTAGCGTTGACAGATGCTAAGTATGAGGGCCGAGGTGAACCTGGCCGAGGTCCGATCTACCGGGAAGCTCGGTGGGGGCCGAGGTGAGCTACTGTCAGCGGCGTGATTATCGGGTGTAACCGTCGGTCCCGAGATTACTGGGTGTAACCGACGGTCCCGAGATTACCGGGTGTAACCATCGCGAGATTAGCGGGACTACCACCCATAAGTAGAGGACCTCACTCCACGATCAGGTACGATGATTTCAGACCTCGAACTAAACTGGGAATCCGACCTATACTGACTTGATCGTCGGAGTGCTCACCTTTTTGTGCAGGTCCGCCCAAGTATTCAGATCGGTCCGGAGGCCGAGTTCGAGCTACAATCAGAAATACACTGTTGAGCATATCCTTGCATAAACATTTGGCGCCGTCTGTGGGGACGACAATCTAAGTCATCCCAATTCTTTTAAACCAGCACGCAAGCGAAAATGGTTCAACCCGCAAACTCGACCAATACGGCAGATCGAAGGACCCTAGCTGCCAGCGATGCCCACCAGAGGGAGGTCGGAGCAGCAGTGGTAGAGGGGCAAGGTCACGACGGCCTAGCAACAGAACCCCTCCGCAGGTCGGCACGAATCACCGCGCCTGTTCTACCACCTGCGCACCCCCCAAGGACATCCAAAGCCACTCGTGGCCGAGGTGGAACCTCTAAGAAGGGCGCCTGGGGTCCAGCCCCGGCCCCGACAAGTGAGAACCTGGACGCACTCCAGAGTGAAATGGAGGCAATGCGCACGCAAATGCGGTTCATGGAGGAAATGTATAACGAAATGATATTAGCTGCAGCCGCATGGTCCCGATCTGAGAACCGAGTGACGCGTGTTGGCATACGCGAGCAAAGGGGTTCCCACCTCGGCCCATTCGAGGAGGAACATCCCGAGGACAACGAGAGCGAGGGACACACTCGCCAGAGAGGAGACCTCCGTGAACACCTCAACAGAAAGAGAGGCTCATCTCTCCGAAAAGGACAGTCACCATCCCGCTCACACAGGAGCTCCAACCAGCAGGCTGAATCCTCTCACAACCCAGCAACTCCCGCAGGGGTGATCACAAGGGCGGAGTTCGACTAGCTGAGGGGCAAGCTCGACGCTCAGGTGGAGGCCTTAAAGGTCAAATGTGAGCAGAAAGAAGGTTCACTGAACGATGGCGACTTGGGAGAATCGCCCTTCACCTCGGACGTTTTGGAAGCACCGATCCCTCCGAAGTTC

mRNA sequence

ATGGTTCAACCCGCAAACTCGACCAATACGGCAGATCGAAGGACCCTAGCTGCCAGCGATGCCCACCAGAGGGAGGTCGGAGCAGCAGTGGTAGAGGGGCAAGGTCACGACGGCCTAGCAACAGAACCCCTCCGCAGGTCGGCACGAATCACCGCGCCTGTTCTACCACCTGCGCACCCCCCAAGGACATCCAAAGCCACTCGTGGCCGAGGTGGAACCTCTAAGAAGGGCGCCTGGGGTCCAGCCCCGGCCCCGACAAGTGAGAACCTGGACGCACTCCAGAGTGAAATGGAGGCAATGCGCACGCAAATGCGGTTCATGGAGGAAATGTATAACGAAATGATATTAGCTGCAGCCGCATGGTCCCGATCTGAGAACCGAGTGACGCGTGTTGGCATACGCGAGCAAAGGGGTTCCCACCTCGGCCCATTCGAGGAGGAACATCCCGAGGACAACGAGAGCGAGGGACACACTCGCCAGAGAGGAGACCTCCGTGAACACCTCAACAGAAAGAGAGGCTCATCTCTCCGAAAAGGACAGTCACCATCCCGCTCACACAGGAGCTCCAACCAGCAGGCTGAATCCTCTCACAACCCAGCAACTCCCGCAGGGGTGATCACAAGGGCGGAGTTCGACTAG

Coding sequence (CDS)

ATGGTTCAACCCGCAAACTCGACCAATACGGCAGATCGAAGGACCCTAGCTGCCAGCGATGCCCACCAGAGGGAGGTCGGAGCAGCAGTGGTAGAGGGGCAAGGTCACGACGGCCTAGCAACAGAACCCCTCCGCAGGTCGGCACGAATCACCGCGCCTGTTCTACCACCTGCGCACCCCCCAAGGACATCCAAAGCCACTCGTGGCCGAGGTGGAACCTCTAAGAAGGGCGCCTGGGGTCCAGCCCCGGCCCCGACAAGTGAGAACCTGGACGCACTCCAGAGTGAAATGGAGGCAATGCGCACGCAAATGCGGTTCATGGAGGAAATGTATAACGAAATGATATTAGCTGCAGCCGCATGGTCCCGATCTGAGAACCGAGTGACGCGTGTTGGCATACGCGAGCAAAGGGGTTCCCACCTCGGCCCATTCGAGGAGGAACATCCCGAGGACAACGAGAGCGAGGGACACACTCGCCAGAGAGGAGACCTCCGTGAACACCTCAACAGAAAGAGAGGCTCATCTCTCCGAAAAGGACAGTCACCATCCCGCTCACACAGGAGCTCCAACCAGCAGGCTGAATCCTCTCACAACCCAGCAACTCCCGCAGGGGTGATCACAAGGGCGGAGTTCGACTAG

Protein sequence

MVQPANSTNTADRRTLAASDAHQREVGAAVVEGQGHDGLATEPLRRSARITAPVLPPAHPPRTSKATRGRGGTSKKGAWGPAPAPTSENLDALQSEMEAMRTQMRFMEEMYNEMILAAAAWSRSENRVTRVGIREQRGSHLGPFEEEHPEDNESEGHTRQRGDLREHLNRKRGSSLRKGQSPSRSHRSSNQQAESSHNPATPAGVITRAEFD

Homology

[Close]

BLAST of MC11g_new0488 vs. NCBI nr
Match: XP_022159327.1 (uncharacterized protein LOC111025738 [Momordica charantia])

HSP 1 Score: 220 bits (561), Expect = 2.76e-66
Identity = 128/212 (60.38%), Postives = 144/212 (67.92%), Query Frame = 0


Query: 1   MVQPANSTNTADRRTLAASDAHQREVGAAVVEGQGHDGLATEPLRRSARITAPVLPPAHP 60
           MVQP +STNT DRR L A+D HQREVGA VVEGQ H+GL TEP  RSARIT P L PAHP
Sbjct: 1   MVQPVDSTNTGDRRALVANDGHQREVGAEVVEGQIHEGLGTEPFCRSARITTPDLSPAHP 60

Query: 61  PRTSKATRGRGGTSKKGAWGPAPAPTSENLDALQSEMEAMRTQMRFMEEMYNEMILAAAA 120
            +  KA RGRGG S++   G APAP+ EN DALQ EMEAMRTQM  MEEMYNEM+ A  A
Sbjct: 61  -KPFKANRGRGGASRRTTLGAAPAPSRENFDALQKEMEAMRTQMLTMEEMYNEMVQAVGA 120

Query: 121 WSRSENRVTRVGIREQRGSHLGPFEEEHPEDNESEGHTRQRGDLREHLNRKRGSSLRKGQ 180
            SRSE+R  R                             +RGDLR+HL+RKR SSLRKG+
Sbjct: 121 GSRSEDRAARD----------------------------ERGDLRDHLSRKRSSSLRKGR 180

Query: 181 SPSRSHRSSNQQAESSHNPATPAGVITRAEFD 212
           SPS SH++SNQQAESS+NP  P GVITR EFD
Sbjct: 181 SPSCSHKNSNQQAESSYNPVVPEGVITREEFD 183

[Close]

BLAST of MC11g_new0488 vs. NCBI nr
Match: XP_022151719.1 (uncharacterized protein LOC111019634 [Momordica charantia])

HSP 1 Score: 149 bits (377), Expect = 2.80e-39
Identity = 82/113 (72.57%), Postives = 91/113 (80.53%), Query Frame = 0


Query: 100 MRTQMRFMEEMYNEMILAAAAWSRSENRVTRVGIREQRGSHLGPFEEEHPEDNESEGHTR 159
           MRTQM  ME+MY+EM+ AA A SRSENRV R  + EQRG HLGP ++ HPE  E E +T 
Sbjct: 1   MRTQMCTMEKMYSEMVQAAGARSRSENRVARNDMHEQRGHHLGPVKKGHPEGGEDEEYTH 60

Query: 160 QRGDLREHLNRKRGSSLRKGQSPSRSHRSSNQQAESSHNPATPAGVITRAEFD 212
           QRGDLREHLNRKR SSLRKGQSPS SHR+SNQQAESS+NP TP GVITR EFD
Sbjct: 61  QRGDLREHLNRKRSSSLRKGQSPSCSHRNSNQQAESSYNPITPEGVITREEFD 113

[Close]

BLAST of MC11g_new0488 vs. NCBI nr
Match: XP_022152854.1 (uncharacterized protein LOC111020479 [Momordica charantia])

HSP 1 Score: 102 bits (253), Expect = 5.46e-21
Identity = 53/66 (80.30%), Postives = 56/66 (84.85%), Query Frame = 0


Query: 1  MVQPANSTNTADRRTLAASDAHQREVGAAVVEGQGHDGLATEPLRRSARITAPVLPPAHP 60
          MVQPANSTNTADRR LAA+  HQREVGA VVEGQGH+ L TEPL RSARIT PVLPPAHP
Sbjct: 1  MVQPANSTNTADRRALAANHGHQREVGAEVVEGQGHEDLGTEPLCRSARITTPVLPPAHP 60

Query: 61 PRTSKA 66
           + SKA
Sbjct: 61 -KPSKA 65

[Close]

BLAST of MC11g_new0488 vs. NCBI nr
Match: XP_022156088.1 (uncharacterized protein LOC111023060 [Momordica charantia])

HSP 1 Score: 100 bits (248), Expect = 1.90e-20
Identity = 61/116 (52.59%), Postives = 75/116 (64.66%), Query Frame = 0


Query: 97  MEAMRTQMRFMEEMYNEMILAAAAWSRSENRVTRVGIREQRGSHLGPFEEEHPEDNESEG 156
           MEAMRTQMR MEEMYN+M+  A A SRS ++V    + EQ   H  P +EEH        
Sbjct: 1   MEAMRTQMRTMEEMYNKMVQIAGARSRSGDQVVHEDVHEQGDLHCDPVDEEHLG------ 60

Query: 157 HTRQRGDLREHLNRKRGSSLRKGQSPSRSHRSSNQQAESSHNPATPAGVITRAEFD 212
                GDLR+HLNRKR SS R  ++ +  H++SNQQAESS+NP  P GVITR EF+
Sbjct: 61  -----GDLRDHLNRKRNSSHRGERTSTYWHKNSNQQAESSYNPIAPEGVITREEFN 105

[Close]

BLAST of MC11g_new0488 vs. NCBI nr
Match: XP_022155128.1 (uncharacterized protein LOC111022267 [Momordica charantia])

HSP 1 Score: 89.0 bits (219), Expect = 6.93e-17
Identity = 48/60 (80.00%), Postives = 51/60 (85.00%), Query Frame = 0


Query: 153 ESEGHTRQRGDLREHLNRKRGSSLRKGQSPSRSHRSSNQQAESSHNPATPAGVITRAEFD 212
           E E +T QRGDLREHLNRKR SSLRKGQSPS SHR+SNQQAESS+NP TP  VITR EFD
Sbjct: 33  EDEEYTHQRGDLREHLNRKRSSSLRKGQSPSSSHRNSNQQAESSYNPITPKRVITREEFD 92

[Close]

BLAST of MC11g_new0488 vs. ExPASy TrEMBL
Match: A0A6J1DZJ1 (uncharacterized protein LOC111025738 OS=Momordica charantia OX=3673 GN=LOC111025738 PE=4 SV=1)

HSP 1 Score: 220 bits (561), Expect = 1.34e-66
Identity = 128/212 (60.38%), Postives = 144/212 (67.92%), Query Frame = 0


Query: 1   MVQPANSTNTADRRTLAASDAHQREVGAAVVEGQGHDGLATEPLRRSARITAPVLPPAHP 60
           MVQP +STNT DRR L A+D HQREVGA VVEGQ H+GL TEP  RSARIT P L PAHP
Sbjct: 1   MVQPVDSTNTGDRRALVANDGHQREVGAEVVEGQIHEGLGTEPFCRSARITTPDLSPAHP 60

Query: 61  PRTSKATRGRGGTSKKGAWGPAPAPTSENLDALQSEMEAMRTQMRFMEEMYNEMILAAAA 120
            +  KA RGRGG S++   G APAP+ EN DALQ EMEAMRTQM  MEEMYNEM+ A  A
Sbjct: 61  -KPFKANRGRGGASRRTTLGAAPAPSRENFDALQKEMEAMRTQMLTMEEMYNEMVQAVGA 120

Query: 121 WSRSENRVTRVGIREQRGSHLGPFEEEHPEDNESEGHTRQRGDLREHLNRKRGSSLRKGQ 180
            SRSE+R  R                             +RGDLR+HL+RKR SSLRKG+
Sbjct: 121 GSRSEDRAARD----------------------------ERGDLRDHLSRKRSSSLRKGR 180

Query: 181 SPSRSHRSSNQQAESSHNPATPAGVITRAEFD 212
           SPS SH++SNQQAESS+NP  P GVITR EFD
Sbjct: 181 SPSCSHKNSNQQAESSYNPVVPEGVITREEFD 183

[Close]

BLAST of MC11g_new0488 vs. ExPASy TrEMBL
Match: A0A6J1DDW5 (uncharacterized protein LOC111019634 OS=Momordica charantia OX=3673 GN=LOC111019634 PE=4 SV=1)

HSP 1 Score: 149 bits (377), Expect = 1.35e-39
Identity = 82/113 (72.57%), Postives = 91/113 (80.53%), Query Frame = 0


Query: 100 MRTQMRFMEEMYNEMILAAAAWSRSENRVTRVGIREQRGSHLGPFEEEHPEDNESEGHTR 159
           MRTQM  ME+MY+EM+ AA A SRSENRV R  + EQRG HLGP ++ HPE  E E +T 
Sbjct: 1   MRTQMCTMEKMYSEMVQAAGARSRSENRVARNDMHEQRGHHLGPVKKGHPEGGEDEEYTH 60

Query: 160 QRGDLREHLNRKRGSSLRKGQSPSRSHRSSNQQAESSHNPATPAGVITRAEFD 212
           QRGDLREHLNRKR SSLRKGQSPS SHR+SNQQAESS+NP TP GVITR EFD
Sbjct: 61  QRGDLREHLNRKRSSSLRKGQSPSCSHRNSNQQAESSYNPITPEGVITREEFD 113

[Close]

BLAST of MC11g_new0488 vs. ExPASy TrEMBL
Match: A0A6J1DHB3 (uncharacterized protein LOC111020479 OS=Momordica charantia OX=3673 GN=LOC111020479 PE=4 SV=1)

HSP 1 Score: 102 bits (253), Expect = 2.65e-21
Identity = 53/66 (80.30%), Postives = 56/66 (84.85%), Query Frame = 0


Query: 1  MVQPANSTNTADRRTLAASDAHQREVGAAVVEGQGHDGLATEPLRRSARITAPVLPPAHP 60
          MVQPANSTNTADRR LAA+  HQREVGA VVEGQGH+ L TEPL RSARIT PVLPPAHP
Sbjct: 1  MVQPANSTNTADRRALAANHGHQREVGAEVVEGQGHEDLGTEPLCRSARITTPVLPPAHP 60

Query: 61 PRTSKA 66
           + SKA
Sbjct: 61 -KPSKA 65

[Close]

BLAST of MC11g_new0488 vs. ExPASy TrEMBL
Match: A0A6J1DPN4 (uncharacterized protein LOC111023060 OS=Momordica charantia OX=3673 GN=LOC111023060 PE=4 SV=1)

HSP 1 Score: 100 bits (248), Expect = 9.21e-21
Identity = 61/116 (52.59%), Postives = 75/116 (64.66%), Query Frame = 0


Query: 97  MEAMRTQMRFMEEMYNEMILAAAAWSRSENRVTRVGIREQRGSHLGPFEEEHPEDNESEG 156
           MEAMRTQMR MEEMYN+M+  A A SRS ++V    + EQ   H  P +EEH        
Sbjct: 1   MEAMRTQMRTMEEMYNKMVQIAGARSRSGDQVVHEDVHEQGDLHCDPVDEEHLG------ 60

Query: 157 HTRQRGDLREHLNRKRGSSLRKGQSPSRSHRSSNQQAESSHNPATPAGVITRAEFD 212
                GDLR+HLNRKR SS R  ++ +  H++SNQQAESS+NP  P GVITR EF+
Sbjct: 61  -----GDLRDHLNRKRNSSHRGERTSTYWHKNSNQQAESSYNPIAPEGVITREEFN 105

[Close]

BLAST of MC11g_new0488 vs. ExPASy TrEMBL
Match: A0A6J1DM55 (uncharacterized protein LOC111022267 OS=Momordica charantia OX=3673 GN=LOC111022267 PE=4 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 3.35e-17
Identity = 48/60 (80.00%), Postives = 51/60 (85.00%), Query Frame = 0


Query: 153 ESEGHTRQRGDLREHLNRKRGSSLRKGQSPSRSHRSSNQQAESSHNPATPAGVITRAEFD 212
           E E +T QRGDLREHLNRKR SSLRKGQSPS SHR+SNQQAESS+NP TP  VITR EFD
Sbjct: 33  EDEEYTHQRGDLREHLNRKRSSSLRKGQSPSSSHRNSNQQAESSYNPITPKRVITREEFD 92

The following BLAST results are available for this feature:

BLAST of MC11g_new0488 vs.


Match Name	E-value	Identity	Description

BLAST of MC11g_new0488 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022159327.1	2.76e-66	60.38	uncharacterized protein LOC111025738 [Momordica charantia]	[more]
XP_022151719.1	2.80e-39	72.57	uncharacterized protein LOC111019634 [Momordica charantia]	[more]
XP_022152854.1	5.46e-21	80.30	uncharacterized protein LOC111020479 [Momordica charantia]	[more]
XP_022156088.1	1.90e-20	52.59	uncharacterized protein LOC111023060 [Momordica charantia]	[more]
XP_022155128.1	6.93e-17	80.00	uncharacterized protein LOC111022267 [Momordica charantia]	[more]

BLAST of MC11g_new0488 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DZJ1	1.34e-66	60.38	uncharacterized protein LOC111025738 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]
A0A6J1DDW5	1.35e-39	72.57	uncharacterized protein LOC111019634 OS=Momordica charantia OX=3673 GN=LOC111019...	[more]
A0A6J1DHB3	2.65e-21	80.30	uncharacterized protein LOC111020479 OS=Momordica charantia OX=3673 GN=LOC111020...	[more]
A0A6J1DPN4	9.21e-21	52.59	uncharacterized protein LOC111023060 OS=Momordica charantia OX=3673 GN=LOC111023...	[more]
A0A6J1DM55	3.35e-17	80.00	uncharacterized protein LOC111022267 OS=Momordica charantia OX=3673 GN=LOC111022...	[more]

BLAST of MC11g_new0488 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 90..110
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 175..202
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 135..212
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..89
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..16
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 135..170

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC11g_new0488.1	MC11g_new0488.1	mRNA