MC07g0208 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC07g0208
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Descriptionethylene-responsive transcription factor ERF039-like
LocationMC07: 5803549 .. 5803740 (+)
RNA-Seq ExpressionMC07g0208
SyntenyMC07g0208
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
GGCGGCGGCGGCGACGGTGGCGGCGGGGGGAGGTTCCGAGGGGTGCGGCTGAGGGCGTGGGGGAAATGGGTGTCGGAAATTCGGGAGCCGAGGAAGAAGTCGAGAATATGGCTGGGGACGTACCCGACGGCGGAGATGGCGGCGCGTGCACACGACGTGGCGGCGCTGGCAATCAAGGGCCGCGGCGCCGTN

mRNA sequence

GGCGGCGGCGGCGACGGTGGCGGCGGGGGGAGGTTCCGAGGGGTGCGGCTGAGGGCGTGGGGGAAATGGGTGTCGGAAATTCGGGAGCCGAGGAAGAAGTCGAGAATATGGCTGGGGACGTACCCGACGGCGGAGATGGCGGCGCGTGCACACGACGTGGCGGCGCTGGCAATCAAGGGCCGCGGCGCCGTN

Coding sequence (CDS)

GGCGGCGGCGGCGACGGTGGCGGCGGGGGGAGGTTCCGAGGGGTGCGGCTGAGGGCGTGGGGGAAATGGGTGTCGGAAATTCGGGAGCCGAGGAAGAAGTCGAGAATATGGCTGGGGACGTACCCGACGGCGGAGATGGCGGCGCGTGCACACGACGTGGCGGCGCTGGCAATCAAGGGCCGCGGCGCCGTN

Protein sequence

GGGGDGGGGGRFRGVRLRAWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGRGAX
Homology
[Close]
BLAST of MC07g0208 vs. ExPASy Swiss-Prot
Match: Q9M210 (Ethylene-responsive transcription factor ERF035 OS=Arabidopsis thaliana OX=3702 GN=ERF035 PE=2 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 7.2e-21
Identity = 46/49 (93.88%), Postives = 49/49 (100.00%), Query Frame = 0 

Query: 12  FRGVRLRAWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKG 61
           +RGVR+R+WGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKG
Sbjct: 71  YRGVRMRSWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKG 119

[Close]
BLAST of MC07g0208 vs. ExPASy Swiss-Prot
Match: Q52QU1 (Ethylene-responsive transcription factor ERF042 OS=Arabidopsis thaliana OX=3702 GN=ERF042 PE=2 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 7.9e-20
Identity = 45/54 (83.33%), Postives = 50/54 (92.59%), Query Frame = 0 

Query: 10 GRFRGVRLRAWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGRGA 64
          G +RG R+R+WGKWVSEIREPRKKSRIWLGT+PTAEMAARAHDVAAL+IKG  A
Sbjct: 24 GVYRGARMRSWGKWVSEIREPRKKSRIWLGTFPTAEMAARAHDVAALSIKGSSA 77

[Close]
BLAST of MC07g0208 vs. ExPASy Swiss-Prot
Match: Q9M080 (Ethylene-responsive transcription factor ERF043 OS=Arabidopsis thaliana OX=3702 GN=ERF043 PE=2 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 1.8e-19
Identity = 43/52 (82.69%), Postives = 49/52 (94.23%), Query Frame = 0 

Query: 12 FRGVRLRAWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGRGA 64
          +RGVR+R+WGKWVSEIREPRKKSRIWLGT+PTAEMA RAHDVAA++IKG  A
Sbjct: 19 YRGVRMRSWGKWVSEIREPRKKSRIWLGTFPTAEMAMRAHDVAAMSIKGTSA 70

[Close]
BLAST of MC07g0208 vs. ExPASy Swiss-Prot
Match: Q9ZQP3 (Ethylene-responsive transcription factor ERF038 OS=Arabidopsis thaliana OX=3702 GN=ERF038 PE=2 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 2.3e-19
Identity = 45/52 (86.54%), Postives = 48/52 (92.31%), Query Frame = 0 

Query: 12 FRGVRLRAWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGRGA 64
          FRGVR+R WGKWVSEIREP+KKSRIWLGT+ TAEMAARAHDVAALAIKG  A
Sbjct: 45 FRGVRMRQWGKWVSEIREPKKKSRIWLGTFSTAEMAARAHDVAALAIKGGSA 96

[Close]
BLAST of MC07g0208 vs. ExPASy Swiss-Prot
Match: Q9SUK8 (Ethylene-responsive transcription factor ERF039 OS=Arabidopsis thaliana OX=3702 GN=ERF039 PE=2 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 3.9e-19
Identity = 45/52 (86.54%), Postives = 47/52 (90.38%), Query Frame = 0 

Query: 12 FRGVRLRAWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGRGA 64
          FRGVR+R WGKWVSEIREPRKKSRIWLGT+ T EMAARAHDVAALAIKG  A
Sbjct: 40 FRGVRMRQWGKWVSEIREPRKKSRIWLGTFSTPEMAARAHDVAALAIKGGSA 91

[Close]
BLAST of MC07g0208 vs. NCBI nr
Match: ART89313.1 (transcription factor AP2-EREBP, partial [Zea mays])

HSP 1 Score: 103 bits (257), Expect = 4.48e-26
Identity = 49/52 (94.23%), Postives = 51/52 (98.08%), Query Frame = 0 

Query: 12  FRGVRLRAWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGRGA 63
           FRGVR+RAWGKWVSEIREPRKKSRIWLGT+PTAEMAARAHDVAALAIKGR A
Sbjct: 53  FRGVRMRAWGKWVSEIREPRKKSRIWLGTFPTAEMAARAHDVAALAIKGRAA 104

[Close]
BLAST of MC07g0208 vs. NCBI nr
Match: XP_022959279.1 (ethylene-responsive transcription factor ERF039-like [Cucurbita moschata])

HSP 1 Score: 103 bits (258), Expect = 5.01e-26
Identity = 50/53 (94.34%), Postives = 51/53 (96.23%), Query Frame = 0 

Query: 11 RFRGVRLRAWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGRGA 63
          +FRGVRLRAWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKG  A
Sbjct: 31 KFRGVRLRAWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGHRA 83

[Close]
BLAST of MC07g0208 vs. NCBI nr
Match: KAG7013824.1 (Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 103 bits (258), Expect = 5.14e-26
Identity = 50/53 (94.34%), Postives = 51/53 (96.23%), Query Frame = 0 

Query: 11 RFRGVRLRAWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGRGA 63
          +FRGVRLRAWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKG  A
Sbjct: 31 KFRGVRLRAWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGHRA 83

[Close]
BLAST of MC07g0208 vs. NCBI nr
Match: XP_022974292.1 (ethylene-responsive transcription factor ERF039-like [Cucurbita maxima])

HSP 1 Score: 103 bits (258), Expect = 5.14e-26
Identity = 50/53 (94.34%), Postives = 51/53 (96.23%), Query Frame = 0 

Query: 11 RFRGVRLRAWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGRGA 63
          +FRGVRLRAWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKG  A
Sbjct: 31 KFRGVRLRAWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGHRA 83

[Close]
BLAST of MC07g0208 vs. NCBI nr
Match: XP_023521023.1 (ethylene-responsive transcription factor ERF039-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 103 bits (258), Expect = 5.14e-26
Identity = 50/53 (94.34%), Postives = 51/53 (96.23%), Query Frame = 0 

Query: 11 RFRGVRLRAWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGRGA 63
          +FRGVRLRAWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKG  A
Sbjct: 31 KFRGVRLRAWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGHRA 83

[Close]
BLAST of MC07g0208 vs. ExPASy TrEMBL
Match: A0A1Y0DJH2 (Transcription factor AP2-EREBP (Fragment) OS=Zea mays OX=4577 PE=2 SV=1)

HSP 1 Score: 103 bits (257), Expect = 2.17e-26
Identity = 49/52 (94.23%), Postives = 51/52 (98.08%), Query Frame = 0 

Query: 12  FRGVRLRAWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGRGA 63
           FRGVR+RAWGKWVSEIREPRKKSRIWLGT+PTAEMAARAHDVAALAIKGR A
Sbjct: 53  FRGVRMRAWGKWVSEIREPRKKSRIWLGTFPTAEMAARAHDVAALAIKGRAA 104

[Close]
BLAST of MC07g0208 vs. ExPASy TrEMBL
Match: A0A6J1H7L4 (ethylene-responsive transcription factor ERF039-like OS=Cucurbita moschata OX=3662 GN=LOC111460308 PE=4 SV=1)

HSP 1 Score: 103 bits (258), Expect = 2.43e-26
Identity = 50/53 (94.34%), Postives = 51/53 (96.23%), Query Frame = 0 

Query: 11 RFRGVRLRAWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGRGA 63
          +FRGVRLRAWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKG  A
Sbjct: 31 KFRGVRLRAWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGHRA 83

[Close]
BLAST of MC07g0208 vs. ExPASy TrEMBL
Match: A0A6J1I9W3 (ethylene-responsive transcription factor ERF039-like OS=Cucurbita maxima OX=3661 GN=LOC111472927 PE=4 SV=1)

HSP 1 Score: 103 bits (258), Expect = 2.49e-26
Identity = 50/53 (94.34%), Postives = 51/53 (96.23%), Query Frame = 0 

Query: 11 RFRGVRLRAWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGRGA 63
          +FRGVRLRAWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKG  A
Sbjct: 31 KFRGVRLRAWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGHRA 83

[Close]
BLAST of MC07g0208 vs. ExPASy TrEMBL
Match: A0A0A0KAN0 (AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G104640 PE=4 SV=1)

HSP 1 Score: 103 bits (258), Expect = 4.24e-26
Identity = 50/53 (94.34%), Postives = 51/53 (96.23%), Query Frame = 0 

Query: 11 RFRGVRLRAWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGRGA 63
          +FRGVRLRAWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKG  A
Sbjct: 46 KFRGVRLRAWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGHRA 98

[Close]
BLAST of MC07g0208 vs. ExPASy TrEMBL
Match: A0A3L6EZ19 (Ethylene-responsive transcription factor ERF034 OS=Zea mays OX=4577 GN=ERF034_5 PE=4 SV=1)

HSP 1 Score: 104 bits (259), Expect = 9.71e-26
Identity = 49/52 (94.23%), Postives = 51/52 (98.08%), Query Frame = 0 

Query: 12  FRGVRLRAWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGRGA 63
           FRGVR+R WGKWVSEIREPRKKSRIWLGT+PTAEMAARAHDVAALAIKGRGA
Sbjct: 85  FRGVRMRVWGKWVSEIREPRKKSRIWLGTFPTAEMAARAHDVAALAIKGRGA 136

[Close]
BLAST of MC07g0208 vs. TAIR 10
Match: AT3G60490.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 100.5 bits (249), Expect = 5.1e-22
Identity = 46/49 (93.88%), Postives = 49/49 (100.00%), Query Frame = 0 

Query: 12  FRGVRLRAWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKG 61
           +RGVR+R+WGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKG
Sbjct: 71  YRGVRMRSWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKG 119

[Close]
BLAST of MC07g0208 vs. TAIR 10
Match: AT2G25820.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 97.1 bits (240), Expect = 5.6e-21
Identity = 45/54 (83.33%), Postives = 50/54 (92.59%), Query Frame = 0 

Query: 10 GRFRGVRLRAWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGRGA 64
          G +RG R+R+WGKWVSEIREPRKKSRIWLGT+PTAEMAARAHDVAAL+IKG  A
Sbjct: 24 GVYRGARMRSWGKWVSEIREPRKKSRIWLGTFPTAEMAARAHDVAALSIKGSSA 77

[Close]
BLAST of MC07g0208 vs. TAIR 10
Match: AT4G32800.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 95.9 bits (237), Expect = 1.3e-20
Identity = 43/52 (82.69%), Postives = 49/52 (94.23%), Query Frame = 0 

Query: 12 FRGVRLRAWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGRGA 64
          +RGVR+R+WGKWVSEIREPRKKSRIWLGT+PTAEMA RAHDVAA++IKG  A
Sbjct: 19 YRGVRMRSWGKWVSEIREPRKKSRIWLGTFPTAEMAMRAHDVAAMSIKGTSA 70

[Close]
BLAST of MC07g0208 vs. TAIR 10
Match: AT2G35700.1 (ERF family protein 38 )

HSP 1 Score: 95.5 bits (236), Expect = 1.6e-20
Identity = 45/52 (86.54%), Postives = 48/52 (92.31%), Query Frame = 0 

Query: 12 FRGVRLRAWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGRGA 64
          FRGVR+R WGKWVSEIREP+KKSRIWLGT+ TAEMAARAHDVAALAIKG  A
Sbjct: 45 FRGVRMRQWGKWVSEIREPKKKSRIWLGTFSTAEMAARAHDVAALAIKGGSA 96

[Close]
BLAST of MC07g0208 vs. TAIR 10
Match: AT4G16750.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 94.7 bits (234), Expect = 2.8e-20
Identity = 45/52 (86.54%), Postives = 47/52 (90.38%), Query Frame = 0 

Query: 12 FRGVRLRAWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGRGA 64
          FRGVR+R WGKWVSEIREPRKKSRIWLGT+ T EMAARAHDVAALAIKG  A
Sbjct: 40 FRGVRMRQWGKWVSEIREPRKKSRIWLGTFSTPEMAARAHDVAALAIKGGSA 91

The following BLAST results are available for this feature:
BLAST of MC07g0208 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9M2107.2e-2193.88Ethylene-responsive transcription factor ERF035 OS=Arabidopsis thaliana OX=3702 ... [more]
Q52QU17.9e-2083.33Ethylene-responsive transcription factor ERF042 OS=Arabidopsis thaliana OX=3702 ... [more]
Q9M0801.8e-1982.69Ethylene-responsive transcription factor ERF043 OS=Arabidopsis thaliana OX=3702 ... [more]
Q9ZQP32.3e-1986.54Ethylene-responsive transcription factor ERF038 OS=Arabidopsis thaliana OX=3702 ... [more]
Q9SUK83.9e-1986.54Ethylene-responsive transcription factor ERF039 OS=Arabidopsis thaliana OX=3702 ... [more]
BLAST of MC07g0208 vs. NCBI nr
Match NameE-valueIdentityDescription
ART89313.14.48e-2694.23transcription factor AP2-EREBP, partial [Zea mays][more]
XP_022959279.15.01e-2694.34ethylene-responsive transcription factor ERF039-like [Cucurbita moschata][more]
KAG7013824.15.14e-2694.34Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp.... [more]
XP_022974292.15.14e-2694.34ethylene-responsive transcription factor ERF039-like [Cucurbita maxima][more]
XP_023521023.15.14e-2694.34ethylene-responsive transcription factor ERF039-like [Cucurbita pepo subsp. pepo... [more]
BLAST of MC07g0208 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1Y0DJH22.17e-2694.23Transcription factor AP2-EREBP (Fragment) OS=Zea mays OX=4577 PE=2 SV=1[more]
A0A6J1H7L42.43e-2694.34ethylene-responsive transcription factor ERF039-like OS=Cucurbita moschata OX=36... [more]
A0A6J1I9W32.49e-2694.34ethylene-responsive transcription factor ERF039-like OS=Cucurbita maxima OX=3661... [more]
A0A0A0KAN04.24e-2694.34AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G104640 PE=... [more]
A0A3L6EZ199.71e-2694.23Ethylene-responsive transcription factor ERF034 OS=Zea mays OX=4577 GN=ERF034_5 ... [more]
BLAST of MC07g0208 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G60490.15.1e-2293.88Integrase-type DNA-binding superfamily protein [more]
AT2G25820.15.6e-2183.33Integrase-type DNA-binding superfamily protein [more]
AT4G32800.11.3e-2082.69Integrase-type DNA-binding superfamily protein [more]
AT2G35700.11.6e-2086.54ERF family protein 38 [more]
AT4G16750.12.8e-2086.54Integrase-type DNA-binding superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001471AP2/ERF domainPRINTSPR00367ETHRSPELEMNTcoord: 12..23
score: 63.48
coord: 34..50
score: 66.1
IPR001471AP2/ERF domainSMARTSM00380rav1_2coord: 11..63
e-value: 7.3E-23
score: 92.0
IPR001471AP2/ERF domainPFAMPF00847AP2coord: 11..60
e-value: 7.2E-15
score: 55.0
IPR001471AP2/ERF domainPROSITEPS51032AP2_ERFcoord: 11..63
score: 21.271919
IPR001471AP2/ERF domainCDDcd00018AP2coord: 20..63
e-value: 2.97692E-19
score: 70.7635
IPR036955AP2/ERF domain superfamilyGENE3D3.30.730.10AP2/ERF domaincoord: 10..63
e-value: 2.5E-21
score: 77.6
NoneNo IPR availablePANTHERPTHR31985:SF130ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF043coord: 11..61
NoneNo IPR availablePANTHERPTHR31985ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATEDcoord: 11..61
IPR016177DNA-binding domain superfamilySUPERFAMILY54171DNA-binding domaincoord: 11..62

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC07g0208.1MC07g0208.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005634 nucleus
molecular_function GO:0003677 DNA binding
molecular_function GO:0003700 DNA-binding transcription factor activity