MC09g1024 (gene) Bitter gourd (Dali-11) v1

BLAST of MC09g1024 vs. ExPASy Swiss-Prot
Match: Q9LQV2 (RNA-dependent RNA polymerase 1 OS=Arabidopsis thaliana OX=3702 GN=RDR1 PE=2 SV=1)

HSP 1 Score: 1365.1 bits (3532), Expect = 0.0e+00
Identity = 685/1113 (61.55%), Postives = 834/1113 (74.93%), Query Frame = 0

Query: 1    MGKTIQLYGFPTGVVQEEVKEFVERITGSGTIDAIKTKRSNGRGKRVCATIQFTNDEGAK 60
            MGKTIQ++GFP GV  EEVK+F+ER+TGSGT+ AIK ++    G RV A +QFT++   +
Sbjct: 1    MGKTIQVFGFPNGVSAEEVKKFLERLTGSGTVYAIKVRQPKKGGPRVYAIVQFTSERHTR 60

Query: 61   LIIFLANGRLYYGSSYLKAKEWKQDILPNPLVFEYNFKGLRLHLGCQISKESFFVLQTEL 120
            LII  A  RLYYG SYLKA E +QDI+P P    +   GL++  GCQ+S + F  L +  
Sbjct: 61   LIITAAAERLYYGRSYLKAFEVEQDIVPKPRASLHTISGLKMFFGCQVSTKKFLTLWSAQ 120

Query: 121  NVSVDFGFDRRVLSFFISHSHVDYMLVLRYENVWQVQLHKPQGQSDVDYLLIQLFGAPRI 180
            +V V FG   R L F  S    DY L L YEN+WQ+ LH PQG+S   +L+IQ+ GAP+I
Sbjct: 121  DVCVSFGIGMRKLHFSFSWYQKDYRLELSYENIWQIDLHSPQGRSS-KFLVIQVIGAPKI 180

Query: 181  YERNSESFGPILDDPFINFSKEIDTKWFRATDFTPSCCIGQSSGLCLEIPYGRQLPNLHD 240
            +E+  +    +L      +S   D +W R TDFT S CIGQS+  CLE+P    +P+  +
Sbjct: 181  FEKEDQPIN-LLFGIMDFYSDGSDEQWIRTTDFTSSSCIGQSTAFCLELPVHLNVPDFRE 240

Query: 241  KFAHYFKEIKGKFTLDRGSTYSSNPN-LVPIVRPPRNISLPYAILFKINLLVQNGCLPGP 300
             FA+Y +     F ++ GS+YSSN N LVP+V PP   SLP+ ILFK+N LVQN CL GP
Sbjct: 241  NFANYAEHRASSFLIESGSSYSSNANTLVPVVDPPPGFSLPFEILFKLNTLVQNACLSGP 300

Query: 301  ALDISFYQMVDPQRNNIGFIDHALNKLYHLKECCYNPSKWLDDEYRKYFKARNPPQPPIM 360
            ALD+ FY++++ ++ +   IDH L KL+HL ECCY P+ WL DEY+K+      P  P +
Sbjct: 301  ALDLDFYRLLNQKKYDRALIDHCLEKLFHLGECCYEPAHWLRDEYKKWISKGKLPLSPTI 360

Query: 361  SLNEGLVYVHRVQVTPCRVYFCGPEVNVSNRVLRRYPEYLDNFLRVSFVDEELDKLYSTE 420
            SL++GLVY++RVQVTP RVYF GPEVNVSNRVLR Y +Y++NFLRVSFVDE+L+K+ S +
Sbjct: 361  SLDDGLVYMYRVQVTPARVYFSGPEVNVSNRVLRHYSKYINNFLRVSFVDEDLEKVRSMD 420

Query: 421  LSPRESSSLEDGKTKIFKRILSVLRDGITIGDKKFEFLAYSSSQLRENSAWMFAPKDGIT 480
            LSPR S+     +TK++ RI SVLRDGI IGDKKFEFLA+SSSQLRENSAWMFAP D IT
Sbjct: 421  LSPRSST---QRRTKLYDRIYSVLRDGIVIGDKKFEFLAFSSSQLRENSAWMFAPIDRIT 480

Query: 481  AAGIRKWMGDFRSIRNVAKYAARLGQSFGSSTETLSVGRREVEVIPDIEVESDGVKYVFS 540
            AA IR WMGDF  IRNVAKYAARLGQSF SS ETL+V   E+EVIPD+E+ S G +YVFS
Sbjct: 481  AAHIRAWMGDFDHIRNVAKYAARLGQSFSSSRETLNVRSDEIEVIPDVEIISLGTRYVFS 540

Query: 541  DGIGKISASFARKVAQKCGI-RHTPSAFQIRYAGFKGVISVDPTSSVKLSLRNSMLKYES 600
            DGIGKISA FARKVA+KCG+   +PSAFQIRY G+KGV++VDP SS KLSLR SM K+ES
Sbjct: 541  DGIGKISAEFARKVARKCGLTEFSPSAFQIRYGGYKGVVAVDPNSSKKLSLRKSMSKFES 600

Query: 601  TDTKLDVLLWSKSLPCYLNRQLITLLSTLGVEDHVFEKKQKELMDQLDTIFTDSMKAQQA 660
             +TKLDVL WSK  PCY+NRQLITLLSTLGV D VFEKKQ+E++D+LD I T  ++A +A
Sbjct: 601  ENTKLDVLAWSKYQPCYMNRQLITLLSTLGVTDSVFEKKQREVVDRLDAILTHPLEAHEA 660

Query: 661  LELMSPGEITNVLKEMISCGYRPDSEPFLSMMLLTFRQSKLLELRRKSRIFIPNGRAMMG 720
            L LM+PGE TN+LK +I CGY+PD+EPFLSMML  FR SKLLELR K+RIFI  GR+MMG
Sbjct: 661  LGLMAPGENTNILKALILCGYKPDAEPFLSMMLQNFRASKLLELRTKTRIFISGGRSMMG 720

Query: 721  CLDETGNLEYGEVFVQCTAHQQLQDDHIIFKRGKSNRHFIATGTVAVAKNPCLHPGDVRV 780
            CLDET  LEYG+V VQ +               +  R FI TG V VAKNPCLHPGDVRV
Sbjct: 721  CLDETRTLEYGQVVVQYSDPM------------RPGRRFIITGPVVVAKNPCLHPGDVRV 780

Query: 781  LTAVDVPSLHHMVDCVVFPQKGPRPHPNECSGSDLDGDIYFVCWDPDLIPPQQVEPMDYT 840
            L AV+VP+L+HMVDCVVFPQKG RPHPNECSGSDLDGDIYFVCWD +L+PP+  EPMDYT
Sbjct: 781  LQAVNVPALNHMVDCVVFPQKGLRPHPNECSGSDLDGDIYFVCWDQELVPPRTSEPMDYT 840

Query: 841  PVPSKLLDHDVTMEEVQEYFANYMVNDSLGIIANAHTAFADREPKKAMSKPCIELAKLFS 900
            P P+++LDHDVT+EEV+EYFANY+VNDSLGIIANAHTAFAD+EP KA S PCIELAK FS
Sbjct: 841  PEPTQILDHDVTIEEVEEYFANYIVNDSLGIIANAHTAFADKEPLKAFSDPCIELAKKFS 900

Query: 901  IAVDFPKTGVPALIPANLRVEEYPDFMDKADKVTYQSENVLGKLFRMLDE-IEPKIDIRS 960
             AVDFPKTGV A+IP +L V+EYPDFM+K DK TY+S+NV+GKLFR + E   P I I+S
Sbjct: 901  TAVDFPKTGVAAVIPQHLYVKEYPDFMEKPDKPTYESKNVIGKLFREVKERAPPLISIKS 960

Query: 961  FTRDVARQAYDPDMEVEGFEEYLDDAIYHKGNYDMRLGNLMNYYRIKNEAELISGGSLSR 1020
            FT DVA ++YD DMEV+GFEEY+D+A Y K NYD +LGNLM+YY IK EAE++SGG +  
Sbjct: 961  FTLDVASKSYDKDMEVDGFEEYVDEAFYQKANYDFKLGNLMDYYGIKTEAEILSGGIMRM 1020

Query: 1021 SLSATKKNEAESIATAVRSLRKEARSWFNENAELHFRHGNNVYARASAWYFVTYHHSYWG 1080
            S S TK+ +AESI  AVR+LRKE  S FN + E       N  A+ASAWY VTYH SYWG
Sbjct: 1021 SKSFTKRRDAESIGRAVRALRKETLSLFNASEE-----EENESAKASAWYHVTYHSSYWG 1080

Query: 1081 WFDEGKDHGHLISFPWCVYDKLVRIKKQKISAR 1111
             ++EG +  H +SF WCVYDKLVRIKK  +  R
Sbjct: 1081 LYNEGLNRDHFLSFAWCVYDKLVRIKKTNLGRR 1091

BLAST of MC09g1024 vs. ExPASy Swiss-Prot
Match: Q0DXS3 (Probable RNA-dependent RNA polymerase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=RDR1 PE=2 SV=2)

HSP 1 Score: 917.9 bits (2371), Expect = 1.1e-265
Identity = 457/731 (62.52%), Postives = 575/731 (78.66%), Query Frame = 0

Query: 378  VYFCGPEVNVSNRVLRRYPEYLDNFLRVSFVDEELDKLYSTELSPRESSSLEDGKTKIFK 437
            VYF GPE+NVSNRV+R +   ++NFLR+SFVDE+ +KL +T+LSPR +S  +  +T ++K
Sbjct: 9    VYFYGPEINVSNRVVRNFSSDIENFLRISFVDEDCEKLRATDLSPRSASGHDANRTALYK 68

Query: 438  RILSVLRDGITIGDKKFEFLAYSSSQLRENSAWMFAPKDGITAAGIRKWMGDFRSIRNVA 497
            R+LSVL DGITIG K FEFLA+SSSQLR+NSAWMFA + G+ A+ IR WMGDFR+IRNVA
Sbjct: 69   RVLSVLSDGITIGGKNFEFLAFSSSQLRDNSAWMFASRQGLAASDIRTWMGDFRNIRNVA 128

Query: 498  KYAARLGQSFGSSTETLSVGRREVEVIPDIEVESDGVKYVFSDGIGKISASFARKVAQKC 557
            KYAARLGQSF SSTETL V + EVE I DI+   +G ++VFSDGIGKIS++FA +VA KC
Sbjct: 129  KYAARLGQSFSSSTETLKVQKYEVEEISDIK---NGTQHVFSDGIGKISSAFANEVAMKC 188

Query: 558  GI-RHTPSAFQIRYAGFKGVISVDPTSSVKLSLRNSMLKYESTDTKLDVLLWSKSLPCYL 617
             + R  PSAFQIRY G+KGV++VDPTS  KLSLR SMLK++S +  +DVL +SK  P +L
Sbjct: 189  NLKRFAPSAFQIRYGGYKGVVAVDPTSRWKLSLRKSMLKFQSDNITVDVLAYSKYQPGFL 248

Query: 618  NRQLITLLSTLGVEDHVFEKKQKELMDQLDTIFTDSMKAQQALELMSPGEITNVLKEMIS 677
            NRQLITLLSTLGV D VFE+KQ+E ++QL+ + TD   A +A+ELM  GEITN +KE++ 
Sbjct: 249  NRQLITLLSTLGVRDSVFEQKQEEAVNQLNKMVTDPQAAIEAIELMPMGEITNAVKELLL 308

Query: 678  CGYRPDSEPFLSMMLLTFRQSKLLELRRKSRIFIPNGRAMMGCLDETGNLEYGEVFVQCT 737
            CGY+PD EP+LSM+L TFR SKLLEL+ KSRI IP GRAMMGCLDET  L+YG+VF++ T
Sbjct: 309  CGYQPDDEPYLSMLLQTFRASKLLELKTKSRILIPKGRAMMGCLDETRTLKYGQVFIRAT 368

Query: 738  AHQQLQDDHIIFKRGKSNRHFIATGTVAVAKNPCLHPGDVRVLTAVDVPSLHHMVDCVVF 797
            +                N  F  TG V +AKNPCLHPGD+R+L AVDVP LHHM +CVVF
Sbjct: 369  SGV------------NDNDRFTVTGKVVIAKNPCLHPGDIRILHAVDVPVLHHMFNCVVF 428

Query: 798  PQKGPRPHPNECSGSDLDGDIYFVCWDPDLIPPQQVEPMDYTPVPSKLLDHDVTMEEVQE 857
            PQ+GPRPHPNECSGSDLDGDIYFV WDP LIPP+ V PMDYTP P++ LDHDVT+EEV+E
Sbjct: 429  PQQGPRPHPNECSGSDLDGDIYFVSWDPSLIPPRMVTPMDYTPAPTETLDHDVTIEEVEE 488

Query: 858  YFANYMVNDSLGIIANAHTAFADREPKKAMSKPCIELAKLFSIAVDFPKTGVPALIPANL 917
            YF NY+VN+SLG+IANAH  FAD+E  KA S PCIELAKLFSIAVDFPKTGVPALIP  L
Sbjct: 489  YFTNYIVNESLGMIANAHVVFADKEDLKAESSPCIELAKLFSIAVDFPKTGVPALIPPEL 548

Query: 918  RVEEYPDFMDKADKVTYQSENVLGKLFRMLDEIEPKIDIRSFTRDVARQAYDPDMEVEGF 977
             V+EYPDFM+K DKVTY+S+ V+GKL+R + +  P   I+ FTR+VAR++YD DM V+G+
Sbjct: 549  HVKEYPDFMEKLDKVTYESKGVIGKLYREIKKHTP--HIKHFTREVARRSYDTDMIVDGY 608

Query: 978  EEYLDDAIYHKGNYDMRLGNLMNYYRIKNEAELISGGSLSRSLSATKKNEAESIATAVRS 1037
            E+Y+ +A+  K  YD +LGNLM++Y IK+EAE+ISG  L  + + TKK++A++I  AVRS
Sbjct: 609  EDYITEAMALKDEYDFKLGNLMDHYGIKSEAEIISGCILKMAKNFTKKSDADAIRLAVRS 668

Query: 1038 LRKEARSWFNENAELHFRHGNNV-YARASAWYFVTYHHSYWGWFDEGKDHGHLISFPWCV 1097
            LRKEARS F+E +     HG++   A+ASAWY VTYH  +WG ++EG +  H ISFPWC+
Sbjct: 669  LRKEARSRFSEMSLDDNGHGHDASEAKASAWYHVTYHPEFWGCYNEGYERPHFISFPWCI 722

Query: 1098 YDKLVRIKKQK 1107
            Y+KL+RIK+++
Sbjct: 729  YEKLLRIKQRR 722

BLAST of MC09g1024 vs. ExPASy Swiss-Prot
Match: O82504 (RNA-dependent RNA polymerase 2 OS=Arabidopsis thaliana OX=3702 GN=RDR2 PE=1 SV=1)

HSP 1 Score: 746.9 bits (1927), Expect = 3.3e-214
Identity = 432/1132 (38.16%), Postives = 654/1132 (57.77%), Query Frame = 0

Query: 4    TIQLYGFPTGVVQEEVKEFVERITGSGTIDA--IKTKRSNGRGKRVCATIQFTNDE-GAK 63
            T+++   P  +V +E+  F+E   G  T+ A  I T R N +  R  A +QFT  E  ++
Sbjct: 11   TVKISNVPQTIVADELLRFLELHLGEDTVFALEIPTTRDNWK-PRDFARVQFTTLEVKSR 70

Query: 64   LIIFLANGRLYYGSSYLKAKEWKQDILPNPLVFEYNFKGLRLHLGCQISKES-FFVLQTE 123
              +  +  +L + +  L+  E   DI+P P+        + L +G   S E  F  L+  
Sbjct: 71   AQLLSSQSKLLFKTHNLRLSEAYDDIIPRPVDPRKRLDDIVLTVGFPESDEKRFCALEKW 130

Query: 124  LNVSVDFGFDRRVLSFFISHSHVDYMLVLRYENVWQVQLHKPQGQ-SDVDYLLIQLFGAP 183
              V      ++R + F++  S   Y + +R+E++ +       G  S++D  L++L   P
Sbjct: 131  DGVRCWILTEKRRVEFWVWESGDCYKIEVRFEDIIETLSCCVNGDASEIDAFLLKLKYGP 190

Query: 184  RIYERNSESFGPILDDPFINFSKE-IDTKWFRATDFTPSCCIGQSSGLCLEIPYGRQLPN 243
            ++++R +             F KE  D  W R TDF+ S  IG S+  CLE+  G  + +
Sbjct: 191  KVFKRVTVHIATKFKSDRYRFCKEDFDFMWIRTTDFSGSKSIGTSTCFCLEVHNGSTMLD 250

Query: 244  LHDKFAHYFKEIKGKFTLDRGSTYSSNPNLVPIVRPP-RNISLPYAILFKINLLVQNGCL 303
            +      Y++E     T   G T++S   +VP++      +  PY ILF++N LV    +
Sbjct: 251  IFSGLP-YYREDTLSLTYVDGKTFASAAQIVPLLNAAILGLEFPYEILFQLNALVHAQKI 310

Query: 304  P-GPALDISFYQMVDPQRNNIGFIDHALNKLYHLKECCYNPSKWLDDEYRKYF-KARNPP 363
                A D+   +++         +   L KL+     CY+P  ++  + +    K ++ P
Sbjct: 311  SLFAASDMELIKILRGMSLETALV--ILKKLHQQSSICYDPVFFVKTQMQSVVKKMKHSP 370

Query: 364  QPPIMSLNE-GLVYVHRVQVTPCRVYFCGPEVNVSNRVLRRYPEYLDNFLRVSFVDEELD 423
                  L E  ++   R  VTP ++Y  GPE+  +N V++ + E++ +F+RV+FV+E+  
Sbjct: 371  ASAYKRLTEQNIMSCQRAYVTPSKIYLLGPELETANYVVKNFAEHVSDFMRVTFVEEDWS 430

Query: 424  KLYSTELS--PRESSSLEDGKTKIFKRILSVLRDGITIGDKKFEFLAYSSSQLRENSAWM 483
            KL +  LS   +E   ++  +T I+ R+LS+L +GIT+G K+FEFLA+S+SQLR NS WM
Sbjct: 431  KLPANALSVNSKEGYFVKPSRTNIYNRVLSILGEGITVGPKRFEFLAFSASQLRGNSVWM 490

Query: 484  FAPKDGITAAGIRKWMGDFRSIRNVAKYAARLGQSFGSSTETLSVGRREVEVIPDIEVES 543
            FA  + + A  IR+WMG FR IR+++K AAR+GQ F +S +TL V  ++VE IPDIEV +
Sbjct: 491  FASNEKVKAEDIREWMGCFRKIRSISKCAARMGQLFSASRQTLIVRAQDVEQIPDIEVTT 550

Query: 544  DGVKYVFSDGIGKISASFARKVAQKCGIRHTPSAFQIRYAGFKGVISVDPTSSVKLSLRN 603
            DG  Y FSDGIGKIS +FA++VAQKCG+ H PSAFQIRY G+KGVI+VD +S  KLSLR+
Sbjct: 551  DGADYCFSDGIGKISLAFAKQVAQKCGLSHVPSAFQIRYGGYKGVIAVDRSSFRKLSLRD 610

Query: 604  SMLKYESTDTKLDVLLWSKSLPCYLNRQLITLLSTLGVEDHVFEKKQKELMDQLDTIFTD 663
            SMLK++S +  L+V  W++S+PC+LNR++I LLSTLG+ED +FE  Q   +  L  +  D
Sbjct: 611  SMLKFDSNNRMLNVTRWTESMPCFLNREIICLLSTLGIEDAMFEAMQAVHLSMLGNMLED 670

Query: 664  SMKAQQALELMSPGEITNVLKEMISCGYRPDSEPFLSMMLLTFRQSKLLELRRKSRIFIP 723
               A   L+ +S     N+L +M+  GY P SEP+LSMML    +S+L EL+ + RI +P
Sbjct: 671  RDAALNVLQKLSGENSKNLLVKMLLQGYAPSSEPYLSMMLRVHHESQLSELKSRCRILVP 730

Query: 724  NGRAMMGCLDETGNLEYGEVFVQCT-AHQQLQDDHIIFKRGKSNRHFIATGTVAVAKNPC 783
             GR ++GC+DE G LEYG+V+V+ T    +L+     + R       +  G V V KNPC
Sbjct: 731  KGRILIGCMDEMGILEYGQVYVRVTLTKAELKSRDQSYFRKIDEETSVVIGKVVVTKNPC 790

Query: 784  LHPGDVRVLTAVDVPSLHH--MVDCVVFPQKGPRPHPNECSGSDLDGDIYFVCWDPDLIP 843
            LHPGD+RVL A+          +DC++FPQKG RPHPNECSG DLDGD +FV WD  +IP
Sbjct: 791  LHPGDIRVLDAIYEVHFEEKGYLDCIIFPQKGERPHPNECSGGDLDGDQFFVSWDEKIIP 850

Query: 844  PQQVEPMDYTPVPSKLLDHDVTMEEVQEYFANYMVNDSLGIIANAHTAFADREPKKAMSK 903
             +   PMDY     +L+DHDVT+EE+ ++F +YM++D+LG+I+ AH   ADR+P+KA S+
Sbjct: 851  SEMDPPMDYAGSRPRLMDHDVTLEEIHKFFVDYMISDTLGVISTAHLVHADRDPEKARSQ 910

Query: 904  PCIELAKLFSIAVDFPKTGVPALIPANLRVEEYPDFMDKADKVTYQSENVLGKLFRMLDE 963
             C+ELA L S AVDF KTG PA +P  L+  E+PDF+++ +K TY SE+V GKL+R +  
Sbjct: 911  KCLELANLHSRAVDFAKTGAPAEMPYALKPREFPDFLERFEKPTYISESVFGKLYRAVKS 970

Query: 964  IEPKIDIRSFTRDVARQAYDPDMEVEGFEEYLDDAIYHKGNYDMRLGNLMNYYRIKNEAE 1023
               +    + + D    AYD  +E  GFE +++ A  H+  Y  +L +LM YY   NE E
Sbjct: 971  SLAQRKPEAESEDTV--AYDVTLEEAGFESFIETAKAHRDMYGEKLTSLMIYYGAANEEE 1030

Query: 1024 LISGGSLSRSLSATKKNE-----AESIATAVRSLRKEARSWFNENAELHFRHGNNVYARA 1083
            +++G   ++ +   + N       + I  +V+ L KEA  WF ++ E            A
Sbjct: 1031 ILTGILKTKEMYLARDNRRYGDMKDRITLSVKDLHKEAMGWFEKSCE----DEQQKKKLA 1090

Query: 1084 SAWYFVTYHHSYWGWFDEGKDHGHLISFPWCVYDKLVRIKKQKISARNARRR 1116
            SAWY+VTY+ ++        +    +SFPW V D L+ IK     A NA+R+
Sbjct: 1091 SAWYYVTYNPNH------RDEKLTFLSFPWIVGDVLLDIK-----AENAQRQ 1121

BLAST of MC09g1024 vs. ExPASy Swiss-Prot
Match: Q7XM31 (Probable RNA-dependent RNA polymerase 2 OS=Oryza sativa subsp. japonica OX=39947 GN=RDR2 PE=2 SV=1)

HSP 1 Score: 738.4 bits (1905), Expect = 1.2e-211
Identity = 436/1133 (38.48%), Postives = 642/1133 (56.66%), Query Frame = 0

Query: 11   PTGVVQEEVKEFVERITGSGTIDAIKTKRSN-GRGKRVCATIQFTNDEGAKLIIFLA-NG 70
            P+ V  E +  F   +  +G   A +   ++ G   R   T+QF +   A     LA +G
Sbjct: 19   PSAVAAELLAFFDSAVAVAGGAFACEIAAAHRGWLSRGHGTVQFGSAAAAAAAAGLASSG 78

Query: 71   RL-YYGSSYLKAKEWKQDILPNPLVFEYNFKGLRLHLGCQISKESFFVLQTELNVSVDFG 130
            RL  +  + L       D+LP          G  L +G ++++  F        V  +  
Sbjct: 79   RLPRFLGALLSVSPSPVDLLPRASDLSLRAAGAGLVVGDRVAERVFEAADAWDGVRAEVI 138

Query: 131  FDRRVLSFFISHSHVDYMLVLRYENVWQVQLHKPQGQSDVDYLLIQLFGAPRIYERNSES 190
              +R +  ++ H    Y L + +E++         G   +   L+QL  APRI+   S  
Sbjct: 139  PGKRRVDLYLEHDSQRYKLEVLFEDMKDCLGCTLDGMGAI---LLQLNYAPRIHTAIS-- 198

Query: 191  FGP-----ILDDPFINFSKEIDTKWFRATDFTPSCCIGQSSGLCLEIPYGRQLPNLHDKF 250
             GP      +DD F    ++    W RA DFTP+   G+ S L L++     + ++    
Sbjct: 199  -GPAVNSRFMDDRFHACKEDAKFSWVRALDFTPNYSFGRCSTLVLKLGKSALVSDILKSL 258

Query: 251  AHYFKEIKGKFTLDRGSTYSSNPNLVPIVRPPRNISLPYAILFKINLLVQNGCLPGPALD 310
               F    G+ T++      ++ N+VP+V  PR+ S+PY +LF++N L+  G +    ++
Sbjct: 259  P--FSGNLGELTMNSMDGVGASSNVVPLVHCPRDYSVPYEVLFRLNSLMHMGKIVAKHVN 318

Query: 311  ISFYQMVDPQRNNIGFIDHALNKLYHLKECCYNPSKWLDDEYRKYFKARNPPQPPIMSLN 370
               ++ +  Q   +        K++ L+  CY P +++  E     ++ N     ++  N
Sbjct: 319  ADLFKAL--QELPVDVSRRIFEKMHKLESTCYGPLQFIQQEAYSMKRSHN-----VLLSN 378

Query: 371  EG-------LVYVHRVQVTPCRVYFCGPEVNVSNRVLRRYPEYLDNFLRVSFVDEELDKL 430
            EG       L+  +RV +TP +++  GPE  V+N V++ +  Y  +F+RV+FVDE+  KL
Sbjct: 379  EGEGEGERKLMKCYRVNITPSKIFCFGPEEEVTNYVVKHHSAYASDFVRVTFVDEDWSKL 438

Query: 431  YSTELSPRESSSL--EDGKTKIFKRILSVLRDGITIGDKKFEFLAYSSSQLRENSAWMFA 490
             S  +S R       +  KT ++ RILS+L+ G +IG K FEFLA+S+SQLR NS WMFA
Sbjct: 439  SSNAISARIEQGFFSKPFKTGLYYRILSILKKGFSIGPKNFEFLAFSASQLRGNSVWMFA 498

Query: 491  PKDGITAAGIRKWMGDFRSIRNVAKYAARLGQSFGSSTETLSVGRREVEVIPDIEVESDG 550
                + A GIR+WMG F +IR+V+K AAR+GQ F SS +T  V R +VEVIPDIE+ +DG
Sbjct: 499  SNASLNAGGIRRWMGHFENIRSVSKCAARMGQLFSSSRQTFEVLRWDVEVIPDIEITTDG 558

Query: 551  VKYVFSDGIGKISASFARKVAQKCGIRHT--PSAFQIRYAGFKGVISVDPTSSVKLSLRN 610
             KY+FSDGIGKIS  FA++VA   G+  T  PSAFQIRY G+KGVI++DP SS+ LSLR 
Sbjct: 559  SKYIFSDGIGKISLRFAKRVAHHVGLDPTNLPSAFQIRYGGYKGVIAIDPMSSIDLSLRP 618

Query: 611  SMLKYESTDTKLDVLLWSKSLPCYLNRQLITLLSTLGVEDHVFEKKQKELMDQLDTIFTD 670
            SM K+ES    L++  WSKS PCY+NR++I+LLSTLG+ D +F   Q++ M + + + T+
Sbjct: 619  SMKKFESESRMLNITSWSKSQPCYVNREIISLLSTLGIRDEIFVAMQQDEMRETEEMLTN 678

Query: 671  SMKAQQALELMSPGEITNVLKEMISCGYRPDSEPFLSMMLLTFRQSKLLELRRKSRIFIP 730
               A   L  +   E    +K M+  GY P SEP+LSM+L   ++++L ++R + +I +P
Sbjct: 679  KEVALSVLGKLGGSETKTAVK-MLLQGYEPSSEPYLSMILKAHQENRLTDIRTRCKIHVP 738

Query: 731  NGRAMMGCLDETGNLEYGEVFVQCTAHQQLQ-DDHIIFKRGKSNRHFIATGTVAVAKNPC 790
             GR ++GCLDETG LEYG+V+++ T + + Q D +  +      +     G VA+ KNPC
Sbjct: 739  KGRVLIGCLDETGVLEYGQVYIRITKNSKEQKDSNQSYFYNDDGKTATVVGKVAITKNPC 798

Query: 791  LHPGDVRVLTAVDVPSLHHMVDCVVFPQKGPRPHPNECSGSDLDGDIYFVCWDPDLIPPQ 850
            LHPGD+RVL A+  P L  MVDC+VFPQ+G RPHPNECSG DLDGD+YF+ WD  LIP +
Sbjct: 799  LHPGDIRVLEAIYDPDLVGMVDCLVFPQRGERPHPNECSGGDLDGDLYFITWDDKLIPEK 858

Query: 851  QVEPMDYTPVPSKLLDHDVTMEEVQEYFANYMVNDSLGIIANAHTAFADREPKKAMSKPC 910
               PMDYT    +++DH VT+EE+Q++F +YM+NDSLG I+ AH   ADR P KA S  C
Sbjct: 859  VDTPMDYTATRPRIMDHVVTLEEIQKHFVDYMINDSLGAISTAHLIHADRSPLKARSPEC 918

Query: 911  IELAKLFSIAVDFPKTGVPALIPANLRVEEYPDFMDKADKVTYQSENVLGKLFR-MLDEI 970
            ++LA L S+AVDF KTG PA +P  LR  EYPDFM++ +K  Y S  VLGKL+R  +  +
Sbjct: 919  LQLATLHSMAVDFAKTGAPAEMPRTLRPREYPDFMERWEKPMYISNGVLGKLYRSAMGHM 978

Query: 971  EPKIDIRSFTRDVARQA--YDPDMEVEGFEEYLDDAIYHKGNYDMRLGNLMNYYRIKNEA 1030
            E   D  + +   A+ +  YDPD+EV G +E+L  A  +   Y+ +L  LMNYYR + E 
Sbjct: 979  EKSGDSGALSSSSAQPSPTYDPDLEVPGSDEFLQAAEEYYELYEEKLTTLMNYYRAELED 1038

Query: 1031 ELISGGSLSRSLSATKKNE-----AESIATAVRSLRKEARSWFNENAELHFRHGNNVYAR 1090
            E+++G   ++ L   + N+      + I  AV +L +EAR W      L  R   +    
Sbjct: 1039 EILTGNIRNKMLYLKRDNKRYFEMKDRIVAAVDALHREARGWL-----LSSRKEEDASRM 1098

Query: 1091 ASAWYFVTYHHSYWGWFDEGKDHGHLISFPWCVYDKLVRIKKQKISARNARRR 1116
            ASAWY VTYH        + +      SFPW   D L+ I   K S++  RRR
Sbjct: 1099 ASAWYRVTYH-------PDRRRGKRFWSFPWIACDNLLAI---KASSQLRRRR 1120

BLAST of MC09g1024 vs. ExPASy Swiss-Prot
Match: Q8LHH9 (Probable RNA-dependent RNA polymerase SHL2 OS=Oryza sativa subsp. japonica OX=39947 GN=SHL2 PE=2 SV=1)

HSP 1 Score: 577.8 bits (1488), Expect = 2.7e-163
Identity = 397/1118 (35.51%), Postives = 583/1118 (52.15%), Query Frame = 0

Query: 49   ATIQFTNDEGAKLIIFLA-NGRLYYGSSYLK---AKEWKQDILPNPLVFEYNFKGLRLHL 108
            A + F   EGA+    LA   RL      L+   A +    +     +  + F  +RL +
Sbjct: 100  AFVHFARPEGARRAADLAGETRLILRGKPLRVASAPDSSLRVSRRSSIAPFRFPDVRLEV 159

Query: 109  GCQISKESFFVL----QTELNVSVD-------FGFDRRVLSFF-----ISHSHVDYMLVL 168
            G   S  +F          L++SVD         F R     F     ++    D  L  
Sbjct: 160  GALPSPGAFLAAWRGPDAGLDLSVDPFDGCCRLVFTRDTAFTFPGFREVAAIRCDVKLEF 219

Query: 169  RYENVWQVQLHKPQGQSDVDYLLIQLFGAPRIYERNSESFGPILDDPFINFSKEIDTKWF 228
               +V +V+L++         LL++L  AP ++ R ++       +P      + D  W 
Sbjct: 220  PVRDVLEVRLYRLDCS-----LLLRLAAAPLVHYRTADD---DFHEPVPFDLLDDDDPWI 279

Query: 229  RATDFTPSCCIGQSSGLCLEIPYGRQLPNLHDKFAHYFKEIKGKFTLDRGSTYSSNPNL- 288
            R TD TPS  IG+       I +  +     D+   Y +E +    +D G  +     L 
Sbjct: 280  RTTDITPSGAIGRCG--VYRISFSARFWPKMDRALDYMRE-RRVAIVDCGGGWGPRRGLT 339

Query: 289  ----VPIVRPPRNI--------SLPYAILFKINLLVQNGCLPGPALDISFYQMVDPQRNN 348
                +    P +++         L + +LF +N LV  G +    L   F+ ++     N
Sbjct: 340  VRDELEFGEPMQDVFFCLQHAEGLKFPLLFMVNALVHKGIINQHQLTPEFFSLLGRSEEN 399

Query: 349  IGFIDHALNKLYHLKECCYNPSKWLDDEYRKYFKARNPPQPPIMSLNEGLVYVHRVQVTP 408
            +     AL   +  K   ++    L     +   ARN P+     + +    V R+ +TP
Sbjct: 400  VNVA--ALRDFWGDKFPVFDACGRLKKALNRV--ARN-PKLLCSKVGDDHAEVRRLVITP 459

Query: 409  CRVYFCGPEVNVSNRVLRRYPEYLDNFLRVSFVDEELDKLYSTELSPRESSSLED----- 468
             R Y   PEV  SNRVLR Y E  D FLRV+F+DE +  L +  L+   +  ++D     
Sbjct: 460  TRAYCLPPEVERSNRVLRHYHEVADRFLRVTFMDEGMQVLNNNVLNSFTAPIVKDLMSNF 519

Query: 469  --GKTKIFKRILSVLRDGITIGDKKFEFLAYSSSQLRENSAWMFAPKDGITAAGIRKWMG 528
               KT ++KR+  +L +G  +  +K+ FLA+SS+QLR+ SAW FA     T   IRKWMG
Sbjct: 520  FQQKTTVYKRVRMLLTEGFHMCGRKYSFLAFSSNQLRDKSAWFFAEDRKTTVEAIRKWMG 579

Query: 529  DFRSIRNVAKYAARLGQSFGSSTETLSVGRREVEVIPDIEVESDGVKYVFSDGIGKISAS 588
             F S +NVAK+AAR+GQ F S+  T+++   EV+   D  V ++   Y+FSDGIGKI+  
Sbjct: 580  RFTS-KNVAKHAARMGQCFSSTYATVTMRPDEVDESFDDVVHNE---YIFSDGIGKITPD 639

Query: 589  FARKVAQKCGIR-HTPSAFQIRYAGFKGVISV--DPTSSVKLSLRNSMLKYESTDTKLDV 648
             A +VA++  +  + PSA+QIR+AGFKGVI+V        +L LR SM K+ES    L+V
Sbjct: 640  LALEVAERLQLTDNPPSAYQIRFAGFKGVIAVWQGHGDGTRLFLRPSMRKFESNHLVLEV 699

Query: 649  LLWSKSLPCYLNRQLITLLSTLGVEDHVFEKKQKELMDQLDTIFTDSMKAQQALELMSPG 708
            + W+K  P +LNRQ+I LLS+L V D +F + Q+ ++  L+ I +D   A + L   S  
Sbjct: 700  VSWTKFQPGFLNRQIIILLSSLNVPDSIFWQMQETMLSNLNNILSDRDVAFEVL-TTSCA 759

Query: 709  EITNVLKEMISCGYRPDSEPFLSMMLLTFRQSKLLELRRKSRIFIPNGRAMMGCLDETGN 768
            +  N    M+S G+ P +EP L  MLL  R ++L +L  K+RIF+P GR +MGCLDE G 
Sbjct: 760  DDGNTAALMLSAGFEPRTEPHLKAMLLAIRSAQLQDLLEKARIFVPKGRWLMGCLDELGV 819

Query: 769  LEYGEVFVQCTA---HQQLQDDHIIFKRGKSNRHFIATGTVAVAKNPCLHPGDVRVLTAV 828
            LE G+ F++ T    +         F     N   I  GTV +AKNPCLHPGDVR+L AV
Sbjct: 820  LEQGQCFIRATVPSLNSYFVKHGSRFSSTDKNTEVI-LGTVVIAKNPCLHPGDVRILEAV 879

Query: 829  DVPSLHHMVDCVVFPQKGPRPHPNECSGSDLDGDIYFVCWDPDLIPP--QQVEPMDYTPV 888
            DVP LHH+VDC+VFPQKG RPH NE SGSDLDGD+YFV WD  LIPP  +   PMDY+P 
Sbjct: 880  DVPELHHLVDCLVFPQKGERPHANEASGSDLDGDLYFVTWDEKLIPPGKKSWNPMDYSPP 939

Query: 889  PSKLLDHDVTMEEVQEYFANYMVNDSLGIIANAHTAFADREPKKAMSKPCIELAKLFSIA 948
             +K L   V+  ++ ++F   M++++LG I NAH   AD     AM + CI LA+L + A
Sbjct: 940  EAKQLPRQVSQHDIIDFFLKNMISENLGRICNAHVVHADLSEYGAMDEKCIHLAELAATA 999

Query: 949  VDFPKTGVPALIPANLRVEEYPDFMDKADKVTYQSENVLGKLFRMLDEIEPKIDIRSFTR 1008
            VDFPKTG  A++P +L+ + YPDFM K D  +Y+SE +LG+L+R + E      +     
Sbjct: 1000 VDFPKTGKLAIMPPHLKPKVYPDFMGKEDGQSYKSEKILGRLYRSIQEASNGDVVSQEVC 1059

Query: 1009 DVARQAYDPDMEVEGFEEYLDDAIYHKGNYDMRLGNLMNYYRIKNEAELISG--GSLSRS 1068
                  YD D+EV G  ++L  A   K +YD +L  L++ YR++ EAEL++G    L ++
Sbjct: 1060 TPNDLPYDIDLEVPGASDFLASAWQCKCSYDAQLSALLSQYRVRTEAELVTGHITFLVKN 1119

Query: 1069 LSATKKNEAESIATAVRSLRKEARSWF----NENAELHFRHGNNVY-ARASAWYFVTYHH 1104
             S  + +  + + TA  +LRKE +S F    ++  E+     N +Y  +ASAWY VTYH 
Sbjct: 1120 SSKKQGDIKDRLKTAYSALRKEFKSTFESIASDQCEIGDDEKNLLYEMKASAWYQVTYHP 1179

BLAST of MC09g1024 vs. NCBI nr
Match: XP_022146790.1 (RNA-dependent RNA polymerase 1-like [Momordica charantia] >XP_022146791.1 RNA-dependent RNA polymerase 1-like [Momordica charantia] >XP_022146792.1 RNA-dependent RNA polymerase 1-like [Momordica charantia] >XP_022146793.1 RNA-dependent RNA polymerase 1-like [Momordica charantia])

HSP 1 Score: 2272 bits (5887), Expect = 0.0
Identity = 1115/1115 (100.00%), Postives = 1115/1115 (100.00%), Query Frame = 0

Query: 1    MGKTIQLYGFPTGVVQEEVKEFVERITGSGTIDAIKTKRSNGRGKRVCATIQFTNDEGAK 60
            MGKTIQLYGFPTGVVQEEVKEFVERITGSGTIDAIKTKRSNGRGKRVCATIQFTNDEGAK
Sbjct: 1    MGKTIQLYGFPTGVVQEEVKEFVERITGSGTIDAIKTKRSNGRGKRVCATIQFTNDEGAK 60

Query: 61   LIIFLANGRLYYGSSYLKAKEWKQDILPNPLVFEYNFKGLRLHLGCQISKESFFVLQTEL 120
            LIIFLANGRLYYGSSYLKAKEWKQDILPNPLVFEYNFKGLRLHLGCQISKESFFVLQTEL
Sbjct: 61   LIIFLANGRLYYGSSYLKAKEWKQDILPNPLVFEYNFKGLRLHLGCQISKESFFVLQTEL 120

Query: 121  NVSVDFGFDRRVLSFFISHSHVDYMLVLRYENVWQVQLHKPQGQSDVDYLLIQLFGAPRI 180
            NVSVDFGFDRRVLSFFISHSHVDYMLVLRYENVWQVQLHKPQGQSDVDYLLIQLFGAPRI
Sbjct: 121  NVSVDFGFDRRVLSFFISHSHVDYMLVLRYENVWQVQLHKPQGQSDVDYLLIQLFGAPRI 180

Query: 181  YERNSESFGPILDDPFINFSKEIDTKWFRATDFTPSCCIGQSSGLCLEIPYGRQLPNLHD 240
            YERNSESFGPILDDPFINFSKEIDTKWFRATDFTPSCCIGQSSGLCLEIPYGRQLPNLHD
Sbjct: 181  YERNSESFGPILDDPFINFSKEIDTKWFRATDFTPSCCIGQSSGLCLEIPYGRQLPNLHD 240

Query: 241  KFAHYFKEIKGKFTLDRGSTYSSNPNLVPIVRPPRNISLPYAILFKINLLVQNGCLPGPA 300
            KFAHYFKEIKGKFTLDRGSTYSSNPNLVPIVRPPRNISLPYAILFKINLLVQNGCLPGPA
Sbjct: 241  KFAHYFKEIKGKFTLDRGSTYSSNPNLVPIVRPPRNISLPYAILFKINLLVQNGCLPGPA 300

Query: 301  LDISFYQMVDPQRNNIGFIDHALNKLYHLKECCYNPSKWLDDEYRKYFKARNPPQPPIMS 360
            LDISFYQMVDPQRNNIGFIDHALNKLYHLKECCYNPSKWLDDEYRKYFKARNPPQPPIMS
Sbjct: 301  LDISFYQMVDPQRNNIGFIDHALNKLYHLKECCYNPSKWLDDEYRKYFKARNPPQPPIMS 360

Query: 361  LNEGLVYVHRVQVTPCRVYFCGPEVNVSNRVLRRYPEYLDNFLRVSFVDEELDKLYSTEL 420
            LNEGLVYVHRVQVTPCRVYFCGPEVNVSNRVLRRYPEYLDNFLRVSFVDEELDKLYSTEL
Sbjct: 361  LNEGLVYVHRVQVTPCRVYFCGPEVNVSNRVLRRYPEYLDNFLRVSFVDEELDKLYSTEL 420

Query: 421  SPRESSSLEDGKTKIFKRILSVLRDGITIGDKKFEFLAYSSSQLRENSAWMFAPKDGITA 480
            SPRESSSLEDGKTKIFKRILSVLRDGITIGDKKFEFLAYSSSQLRENSAWMFAPKDGITA
Sbjct: 421  SPRESSSLEDGKTKIFKRILSVLRDGITIGDKKFEFLAYSSSQLRENSAWMFAPKDGITA 480

Query: 481  AGIRKWMGDFRSIRNVAKYAARLGQSFGSSTETLSVGRREVEVIPDIEVESDGVKYVFSD 540
            AGIRKWMGDFRSIRNVAKYAARLGQSFGSSTETLSVGRREVEVIPDIEVESDGVKYVFSD
Sbjct: 481  AGIRKWMGDFRSIRNVAKYAARLGQSFGSSTETLSVGRREVEVIPDIEVESDGVKYVFSD 540

Query: 541  GIGKISASFARKVAQKCGIRHTPSAFQIRYAGFKGVISVDPTSSVKLSLRNSMLKYESTD 600
            GIGKISASFARKVAQKCGIRHTPSAFQIRYAGFKGVISVDPTSSVKLSLRNSMLKYESTD
Sbjct: 541  GIGKISASFARKVAQKCGIRHTPSAFQIRYAGFKGVISVDPTSSVKLSLRNSMLKYESTD 600

Query: 601  TKLDVLLWSKSLPCYLNRQLITLLSTLGVEDHVFEKKQKELMDQLDTIFTDSMKAQQALE 660
            TKLDVLLWSKSLPCYLNRQLITLLSTLGVEDHVFEKKQKELMDQLDTIFTDSMKAQQALE
Sbjct: 601  TKLDVLLWSKSLPCYLNRQLITLLSTLGVEDHVFEKKQKELMDQLDTIFTDSMKAQQALE 660

Query: 661  LMSPGEITNVLKEMISCGYRPDSEPFLSMMLLTFRQSKLLELRRKSRIFIPNGRAMMGCL 720
            LMSPGEITNVLKEMISCGYRPDSEPFLSMMLLTFRQSKLLELRRKSRIFIPNGRAMMGCL
Sbjct: 661  LMSPGEITNVLKEMISCGYRPDSEPFLSMMLLTFRQSKLLELRRKSRIFIPNGRAMMGCL 720

Query: 721  DETGNLEYGEVFVQCTAHQQLQDDHIIFKRGKSNRHFIATGTVAVAKNPCLHPGDVRVLT 780
            DETGNLEYGEVFVQCTAHQQLQDDHIIFKRGKSNRHFIATGTVAVAKNPCLHPGDVRVLT
Sbjct: 721  DETGNLEYGEVFVQCTAHQQLQDDHIIFKRGKSNRHFIATGTVAVAKNPCLHPGDVRVLT 780

Query: 781  AVDVPSLHHMVDCVVFPQKGPRPHPNECSGSDLDGDIYFVCWDPDLIPPQQVEPMDYTPV 840
            AVDVPSLHHMVDCVVFPQKGPRPHPNECSGSDLDGDIYFVCWDPDLIPPQQVEPMDYTPV
Sbjct: 781  AVDVPSLHHMVDCVVFPQKGPRPHPNECSGSDLDGDIYFVCWDPDLIPPQQVEPMDYTPV 840

Query: 841  PSKLLDHDVTMEEVQEYFANYMVNDSLGIIANAHTAFADREPKKAMSKPCIELAKLFSIA 900
            PSKLLDHDVTMEEVQEYFANYMVNDSLGIIANAHTAFADREPKKAMSKPCIELAKLFSIA
Sbjct: 841  PSKLLDHDVTMEEVQEYFANYMVNDSLGIIANAHTAFADREPKKAMSKPCIELAKLFSIA 900

Query: 901  VDFPKTGVPALIPANLRVEEYPDFMDKADKVTYQSENVLGKLFRMLDEIEPKIDIRSFTR 960
            VDFPKTGVPALIPANLRVEEYPDFMDKADKVTYQSENVLGKLFRMLDEIEPKIDIRSFTR
Sbjct: 901  VDFPKTGVPALIPANLRVEEYPDFMDKADKVTYQSENVLGKLFRMLDEIEPKIDIRSFTR 960

Query: 961  DVARQAYDPDMEVEGFEEYLDDAIYHKGNYDMRLGNLMNYYRIKNEAELISGGSLSRSLS 1020
            DVARQAYDPDMEVEGFEEYLDDAIYHKGNYDMRLGNLMNYYRIKNEAELISGGSLSRSLS
Sbjct: 961  DVARQAYDPDMEVEGFEEYLDDAIYHKGNYDMRLGNLMNYYRIKNEAELISGGSLSRSLS 1020

Query: 1021 ATKKNEAESIATAVRSLRKEARSWFNENAELHFRHGNNVYARASAWYFVTYHHSYWGWFD 1080
            ATKKNEAESIATAVRSLRKEARSWFNENAELHFRHGNNVYARASAWYFVTYHHSYWGWFD
Sbjct: 1021 ATKKNEAESIATAVRSLRKEARSWFNENAELHFRHGNNVYARASAWYFVTYHHSYWGWFD 1080

Query: 1081 EGKDHGHLISFPWCVYDKLVRIKKQKISARNARRR 1115
            EGKDHGHLISFPWCVYDKLVRIKKQKISARNARRR
Sbjct: 1081 EGKDHGHLISFPWCVYDKLVRIKKQKISARNARRR 1115

BLAST of MC09g1024 vs. NCBI nr
Match: XP_038877934.1 (RNA-dependent RNA polymerase 1-like isoform X1 [Benincasa hispida] >XP_038877936.1 RNA-dependent RNA polymerase 1-like isoform X1 [Benincasa hispida] >XP_038877937.1 RNA-dependent RNA polymerase 1-like isoform X1 [Benincasa hispida] >XP_038877938.1 RNA-dependent RNA polymerase 1-like isoform X1 [Benincasa hispida])

HSP 1 Score: 1921 bits (4976), Expect = 0.0
Identity = 938/1114 (84.20%), Postives = 1019/1114 (91.47%), Query Frame = 0

Query: 1    MGKTIQLYGFPTGVVQEEVKEFVERITGSGTIDAIKTKRSNGRGKRVCATIQFTNDEGAK 60
            MGKTIQL+GFP+GV+QE VK FVER TG GTIDAI TKRS GRG+R+ A IQFT++EGAK
Sbjct: 1    MGKTIQLFGFPSGVLQESVKTFVERFTGKGTIDAINTKRSKGRGRRMYAIIQFTDEEGAK 60

Query: 61   LIIFLANGRLYYGSSYLKAKEWKQDILPNPLVFEYNFKGLRLHLGCQISKESFFVLQTEL 120
             II  A   L+YG+SYLKA+EWK DILP+P VFEYNFKGLRLHLGCQISKESF +L TE 
Sbjct: 61   SIISKATEGLFYGTSYLKAREWKHDILPDPPVFEYNFKGLRLHLGCQISKESFSMLWTES 120

Query: 121  NVSVDFGFDRRVLSFFISHSHVDYMLVLRYENVWQVQLHKPQGQSDVDYLLIQLFGAPRI 180
            NVSVDFGF++R L FFIS+ HVDYMLVLRYEN+WQV+LHKPQGQS VDYLLIQLFGAPRI
Sbjct: 121  NVSVDFGFEQRKLYFFISYPHVDYMLVLRYENIWQVELHKPQGQS-VDYLLIQLFGAPRI 180

Query: 181  YERNSESFGPILDDPFINFSKEIDTKWFRATDFTPSCCIGQSSGLCLEIPYGRQLPNLHD 240
            YER++ S G I+ DPF+NFS E+DT+WFRATDFTPSCCIGQS+ +CLEIPYGRQLPN HD
Sbjct: 181  YERDAISLGHIIGDPFLNFSMEVDTQWFRATDFTPSCCIGQSAAICLEIPYGRQLPNFHD 240

Query: 241  KFAHYFKEIKGKFTLDRGSTYSSNPNLVPIVRPPRNISLPYAILFKINLLVQNGCLPGPA 300
            KFA YFKE  GKF+L  GSTYSSN NLVP+VRPP  I+LPYAILFKINLLVQ GCLPGPA
Sbjct: 241  KFA-YFKEFNGKFSLVSGSTYSSNVNLVPVVRPPLTINLPYAILFKINLLVQQGCLPGPA 300

Query: 301  LDISFYQMVDPQRNNIGFIDHALNKLYHLKECCYNPSKWLDDEYRKYFKARNPPQPPIMS 360
            LDI+FYQMVDP+  NI FIDHAL KL HLKECCYNPSKWLD+EYRKYFK++NPPQPPI+S
Sbjct: 301  LDINFYQMVDPRIYNIAFIDHALKKLLHLKECCYNPSKWLDEEYRKYFKSKNPPQPPILS 360

Query: 361  LNEGLVYVHRVQVTPCRVYFCGPEVNVSNRVLRRYPEYLDNFLRVSFVDEELDKLYSTEL 420
            L+EGLVYVHRVQVTPC+VYFCGPEVNVSNRVLRRYP+YLDNFLRVSFVDEELDK+YSTEL
Sbjct: 361  LSEGLVYVHRVQVTPCKVYFCGPEVNVSNRVLRRYPDYLDNFLRVSFVDEELDKMYSTEL 420

Query: 421  SPRESSSLEDGKTKIFKRILSVLRDGITIGDKKFEFLAYSSSQLRENSAWMFAPKDGITA 480
            SPR SSSLEDGKTKIFKRILSVLRDGITIGDKKFEFLAYSSSQLREN+AWMFAP+DG+TA
Sbjct: 421  SPRASSSLEDGKTKIFKRILSVLRDGITIGDKKFEFLAYSSSQLRENAAWMFAPRDGLTA 480

Query: 481  AGIRKWMGDFRSIRNVAKYAARLGQSFGSSTETLSVGRREVEVIPDIEVESDG-VKYVFS 540
            A IR+WMGDF  IRNVAKYAARLGQSFGSSTETLSV RREV +IPDIEVES G V YVFS
Sbjct: 481  ARIRRWMGDFHCIRNVAKYAARLGQSFGSSTETLSVSRREVNLIPDIEVESGGGVNYVFS 540

Query: 541  DGIGKISASFARKVAQKCGIRHTPSAFQIRYAGFKGVISVDPTSSVKLSLRNSMLKYEST 600
            DGIGKIS SFA+KVA+KCGIRH PSAFQIRYAGFKGVISVDPTSSVKLSLRNSMLKYEST
Sbjct: 541  DGIGKISVSFAKKVAKKCGIRHMPSAFQIRYAGFKGVISVDPTSSVKLSLRNSMLKYEST 600

Query: 601  DTKLDVLLWSKSLPCYLNRQLITLLSTLGVEDHVFEKKQKELMDQLDTIFTDSMKAQQAL 660
            DTKLDVL WSK  PC+LNRQLITLLSTLGV+DHVFE KQ+EL+D+LDTIF+D MKAQ+AL
Sbjct: 601  DTKLDVLSWSKYHPCFLNRQLITLLSTLGVQDHVFESKQRELIDELDTIFSDPMKAQRAL 660

Query: 661  ELMSPGEITNVLKEMISCGYRPDSEPFLSMMLLTFRQSKLLELRRKSRIFIPNGRAMMGC 720
            ELMSPGE T +LKEM+ CGYRPDSEPFL MML TFR+SKLLELRRKSRIFIPNGRAM+GC
Sbjct: 661  ELMSPGENTKILKEMMLCGYRPDSEPFLWMMLHTFRESKLLELRRKSRIFIPNGRAMLGC 720

Query: 721  LDETGNLEYGEVFVQCTAHQQLQDDHIIFKRGKSNRHFIATGTVAVAKNPCLHPGDVRVL 780
            LDET NLEYGEVFVQC+AHQQL+DDHIIFKR KSNRHFI TGTV VAKNPCLHPGDVRVL
Sbjct: 721  LDETRNLEYGEVFVQCSAHQQLRDDHIIFKRRKSNRHFIVTGTVVVAKNPCLHPGDVRVL 780

Query: 781  TAVDVPSLHHMVDCVVFPQKGPRPHPNECSGSDLDGDIYFVCWDPDLIPPQQVEPMDYTP 840
            TAVDVP+LHHMVDCVVFPQKG RPHPNECSGSDLDGDIYFVCWDPDLIPP QVEPMDYTP
Sbjct: 781  TAVDVPALHHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDPDLIPPLQVEPMDYTP 840

Query: 841  VPSKLLDHDVTMEEVQEYFANYMVNDSLGIIANAHTAFADREPKKAMSKPCIELAKLFSI 900
            VPSKLLDHDVTMEEVQEYFANYMVNDSLGIIANAHTAFAD+EP+KAMS PCIELAKLFSI
Sbjct: 841  VPSKLLDHDVTMEEVQEYFANYMVNDSLGIIANAHTAFADKEPEKAMSNPCIELAKLFSI 900

Query: 901  AVDFPKTGVPALIPANLRVEEYPDFMDKADKVTYQSENVLGKLFRMLDEIEPKI-DIRSF 960
            AVDFPKTG+PALIPANLRV+EYPDFMDKADKVTY+S+NVLGKLFRMLD I P I +IRSF
Sbjct: 901  AVDFPKTGIPALIPANLRVQEYPDFMDKADKVTYESKNVLGKLFRMLDNIGPNIKNIRSF 960

Query: 961  --TRDVARQAYDPDMEVEGFEEYLDDAIYHKGNYDMRLGNLMNYYRIKNEAELISGGSLS 1020
              T DVAR+AYDPDMEVEGFEEYLDDAIYHK NYDMRLGNLM+YY+IK EAELISGGSL+
Sbjct: 961  AYTPDVAREAYDPDMEVEGFEEYLDDAIYHKNNYDMRLGNLMHYYKIKTEAELISGGSLT 1020

Query: 1021 RSLSATKKNEAESIATAVRSLRKEARSWFNENAELHFRHGNNVYARASAWYFVTYHHSYW 1080
             SLS TKKNEAESI  AV+SLRKEAR WFNENA+LH+ H  NVYARASAWYFVTYHH+YW
Sbjct: 1021 SSLSFTKKNEAESITMAVKSLRKEARGWFNENADLHYGHDTNVYARASAWYFVTYHHTYW 1080

Query: 1081 GWFDEGKDHGHLISFPWCVYDKLVRIKKQKISAR 1110
            GW D  K+HGH +SFPWC+YDKL+RIK +K ++R
Sbjct: 1081 GWSDGRKNHGHFLSFPWCIYDKLIRIKNRKTNSR 1112

BLAST of MC09g1024 vs. NCBI nr
Match: XP_023539816.1 (RNA-dependent RNA polymerase 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1903 bits (4929), Expect = 0.0
Identity = 936/1113 (84.10%), Postives = 1009/1113 (90.66%), Query Frame = 0

Query: 1    MGKTIQLYGFPTGVVQEEVKEFVERITGSGTIDAIKTKRSNGRGKRVCATIQFTNDEGAK 60
            MGKTIQLYGFP+GV+QE VK FVER TG G+IDAI  KRS GRGKR+ A IQF +D GAK
Sbjct: 1    MGKTIQLYGFPSGVLQESVKAFVERFTGEGSIDAINVKRSRGRGKRLYAIIQFIDDVGAK 60

Query: 61   LIIFLANGRLYYGSSYLKAKEWKQDILPNPLVFEYNFKGLRLHLGCQISKESFFVLQTEL 120
            LII LAN  L YG+SYLKA+EWKQDIL +PLVFEYNFKGL LHLGCQIS+E FFVL  E 
Sbjct: 61   LIISLANASLRYGTSYLKAREWKQDILQDPLVFEYNFKGLELHLGCQISREEFFVLWRES 120

Query: 121  NVSVDFGFDRRVLSFFISHSHVDYMLVLRYENVWQVQLHKPQGQSDVDYLLIQLFGAPRI 180
            NVSV+F F+RR L FFISHSH DYMLVLRYEN+WQV+LHKP GQS +DYLLIQL GAPRI
Sbjct: 121  NVSVNFEFERRDLKFFISHSHADYMLVLRYENIWQVELHKPPGQS-IDYLLIQLVGAPRI 180

Query: 181  YERNSESFGPILDDPFINFSKEIDTKWFRATDFTPSCCIGQSSGLCLEIPYGRQLPNLHD 240
            YER+++ FG I +DPF++FSKE+DT+WFRATDFTPSCCIGQS  LCLEIPYGR LPN HD
Sbjct: 181  YERDTKLFGHISEDPFLSFSKEMDTEWFRATDFTPSCCIGQSGALCLEIPYGRLLPNFHD 240

Query: 241  KFAHYFKEIKGKFTLDRGSTYSSNPNLVPIVRPPRNISLPYAILFKINLLVQNGCLPGPA 300
            KFA YFKEIKGKFTL  GSTYSSN NLVP+VRPP +I LPYAILFKINLLVQ GCLPGPA
Sbjct: 241  KFA-YFKEIKGKFTLASGSTYSSNVNLVPVVRPPLSIHLPYAILFKINLLVQQGCLPGPA 300

Query: 301  LDISFYQMVDPQRNNIGFIDHALNKLYHLKECCYNPSKWLDDEYRKYFKARNPPQPPIMS 360
            LDISFY+MVDPQ +NI FID AL KLY LKECCYNPSKWL +EYRKY K  NPPQPP +S
Sbjct: 301  LDISFYEMVDPQIHNIAFIDRALRKLYDLKECCYNPSKWLGEEYRKYSKLTNPPQPPNLS 360

Query: 361  LNEGLVYVHRVQVTPCRVYFCGPEVNVSNRVLRRYPEYLDNFLRVSFVDEELDKLYSTEL 420
            L+EGLVYVHRVQVTPCRVYFCGPEVNVSNRVLRRYPEYLDNFLRVSFVDEELDKLYSTEL
Sbjct: 361  LDEGLVYVHRVQVTPCRVYFCGPEVNVSNRVLRRYPEYLDNFLRVSFVDEELDKLYSTEL 420

Query: 421  SPRESSSLEDGKTKIFKRILSVLRDGITIGDKKFEFLAYSSSQLRENSAWMFAPKDGITA 480
            SPRESSSLEDGKTKIFKRILSVL+DGITIGDKKFEFLAYSSSQLREN+ WMFAP+DGITA
Sbjct: 421  SPRESSSLEDGKTKIFKRILSVLKDGITIGDKKFEFLAYSSSQLRENAVWMFAPRDGITA 480

Query: 481  AGIRKWMGDFRSIRNVAKYAARLGQSFGSSTETLSVGRREVEVIPDIEVESD-GVKYVFS 540
            A IRKWMGDF SIRNVAKYAARLGQSFGSSTET SV RREVEVIPDIEV+SD G+ YVFS
Sbjct: 481  AKIRKWMGDFHSIRNVAKYAARLGQSFGSSTETASVSRREVEVIPDIEVKSDAGINYVFS 540

Query: 541  DGIGKISASFARKVAQKCGIRHTPSAFQIRYAGFKGVISVDPTSSVKLSLRNSMLKYEST 600
            DGIGKISASFAR+VA+KC IRHTPSAFQIRYAGFKGVISVDPTS VKLSLRNSMLKYEST
Sbjct: 541  DGIGKISASFAREVARKCRIRHTPSAFQIRYAGFKGVISVDPTSFVKLSLRNSMLKYEST 600

Query: 601  DTKLDVLLWSKSLPCYLNRQLITLLSTLGVEDHVFEKKQKELMDQLDTIFTDSMKAQQAL 660
            DTKLDVL WS+  PCYLNRQLITLLSTLGV+D +FE KQKEL+DQLDTIF D +KAQQAL
Sbjct: 601  DTKLDVLSWSRYHPCYLNRQLITLLSTLGVQDDIFESKQKELIDQLDTIFMDPLKAQQAL 660

Query: 661  ELMSPGEITNVLKEMISCGYRPDSEPFLSMMLLTFRQSKLLELRRKSRIFIPNGRAMMGC 720
            ELMSPGE TN+LKE+ISCGYRPDSEPFLSMML TFR+SKLLELRRKSRIFIPNGRAMMGC
Sbjct: 661  ELMSPGENTNILKEIISCGYRPDSEPFLSMMLHTFRESKLLELRRKSRIFIPNGRAMMGC 720

Query: 721  LDETGNLEYGEVFVQCTAHQQLQDDHIIFKRGKSNRHFIATGTVAVAKNPCLHPGDVRVL 780
            LDETGNLEYGEVFVQC+AHQQL +DHIIFKR KSN+HFI TGTV VAKNPCLHPGDVRVL
Sbjct: 721  LDETGNLEYGEVFVQCSAHQQLHNDHIIFKRSKSNQHFIVTGTVVVAKNPCLHPGDVRVL 780

Query: 781  TAVDVPSLHHMVDCVVFPQKGPRPHPNECSGSDLDGDIYFVCWDPDLIPPQQVEPMDYTP 840
            TAVDVPSLHHMVDC+VFPQKGPRPHPNECSGSDLDGDIYFVCWDPDLIPPQQVEPMDYTP
Sbjct: 781  TAVDVPSLHHMVDCLVFPQKGPRPHPNECSGSDLDGDIYFVCWDPDLIPPQQVEPMDYTP 840

Query: 841  VPSKLLDHDVTMEEVQEYFANYMVNDSLGIIANAHTAFADREPKKAMSKPCIELAKLFSI 900
            V S+LLDHDVTMEEVQEYFANYMVNDSLGIIANAHTAFAD  P+KAMS+PCI+LAKLFSI
Sbjct: 841  VLSRLLDHDVTMEEVQEYFANYMVNDSLGIIANAHTAFADSRPEKAMSEPCIKLAKLFSI 900

Query: 901  AVDFPKTGVPALIPANLRVEEYPDFMDKADKVTYQSENVLGKLFRMLDEIEPKIDIRS-- 960
            AVDFPKTGVPALI A+LRV+ YPDFMDK DK +Y+S NVLGKLFRMLD+IEP+I I+S  
Sbjct: 901  AVDFPKTGVPALISADLRVQVYPDFMDKPDKQSYKSHNVLGKLFRMLDDIEPRISIKSVK 960

Query: 961  FTRDVARQAYDPDMEVEGFEEYLDDAIYHKGNYDMRLGNLMNYYRIKNEAELISGGSLSR 1020
            FTR++ARQAYDPDMEV+GFEEYLDDA+YHK NYDMRLGNLM YY+IK EAELISG SL++
Sbjct: 961  FTREIARQAYDPDMEVDGFEEYLDDALYHKNNYDMRLGNLMKYYKIKTEAELISGVSLTK 1020

Query: 1021 SLSATKKNEAESIATAVRSLRKEARSWFNENAELHFRHGNNVYARASAWYFVTYHHSYWG 1080
            S S TKKNEAESI  AV+SLRKEAR WFNENA LHF H NN YARASAWYFVTYH+SYWG
Sbjct: 1021 SSSFTKKNEAESIIMAVKSLRKEARGWFNENAGLHFGHDNNAYARASAWYFVTYHYSYWG 1080

Query: 1081 WFDEGKDHGHLISFPWCVYDKLVRIKKQKISAR 1110
            W+ E K+  H +SFPWCVYDKL+RIKK+KI AR
Sbjct: 1081 WYGE-KNESHFLSFPWCVYDKLIRIKKRKIGAR 1110

BLAST of MC09g1024 vs. NCBI nr
Match: KAG6599932.1 (RNA-dependent RNA polymerase 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1902 bits (4927), Expect = 0.0
Identity = 936/1113 (84.10%), Postives = 1009/1113 (90.66%), Query Frame = 0

Query: 1    MGKTIQLYGFPTGVVQEEVKEFVERITGSGTIDAIKTKRSNGRGKRVCATIQFTNDEGAK 60
            MGKTIQLYGFP+GV+QE VK FVER TG G+IDAI  KRS GRGKR+ A IQF +D GAK
Sbjct: 1    MGKTIQLYGFPSGVLQESVKAFVERFTGEGSIDAINVKRSRGRGKRLYAIIQFIDDVGAK 60

Query: 61   LIIFLANGRLYYGSSYLKAKEWKQDILPNPLVFEYNFKGLRLHLGCQISKESFFVLQTEL 120
            LII LAN  L YG+SYLKA+EWKQDIL +PLVFEYNFKGL LHLGCQIS+E FFVL  E 
Sbjct: 61   LIISLANASLRYGTSYLKAREWKQDILQDPLVFEYNFKGLELHLGCQISREEFFVLWRES 120

Query: 121  NVSVDFGFDRRVLSFFISHSHVDYMLVLRYENVWQVQLHKPQGQSDVDYLLIQLFGAPRI 180
            NVSV+F F+RR L FFISH  VDYMLVLRYEN+WQV+LHKPQGQS +DYLLIQL GAPRI
Sbjct: 121  NVSVNFEFERRDLKFFISHPRVDYMLVLRYENIWQVELHKPQGQS-IDYLLIQLVGAPRI 180

Query: 181  YERNSESFGPILDDPFINFSKEIDTKWFRATDFTPSCCIGQSSGLCLEIPYGRQLPNLHD 240
            YER+++ FG I +DPF++FSKE+DTKWFRATDFTPSCCIGQS  LCLEIPYGR LPN HD
Sbjct: 181  YERDTKLFGHISEDPFLSFSKEMDTKWFRATDFTPSCCIGQSGALCLEIPYGRLLPNFHD 240

Query: 241  KFAHYFKEIKGKFTLDRGSTYSSNPNLVPIVRPPRNISLPYAILFKINLLVQNGCLPGPA 300
            KFA YFKEIKGKFTL  GSTYSSN NLVP+VRPP +I LPYAILFKINLLVQ GCLPGP+
Sbjct: 241  KFA-YFKEIKGKFTLASGSTYSSNVNLVPVVRPPLSIHLPYAILFKINLLVQQGCLPGPS 300

Query: 301  LDISFYQMVDPQRNNIGFIDHALNKLYHLKECCYNPSKWLDDEYRKYFKARNPPQPPIMS 360
            LDISFY+MVDPQ +NI FID AL KLY LKECCYNPSKWL +EYRKY K RNPPQPP +S
Sbjct: 301  LDISFYEMVDPQIHNIAFIDRALRKLYDLKECCYNPSKWLGEEYRKYSKLRNPPQPPNLS 360

Query: 361  LNEGLVYVHRVQVTPCRVYFCGPEVNVSNRVLRRYPEYLDNFLRVSFVDEELDKLYSTEL 420
            L+EGLVYVHRVQVTPCRVYFCGPEVNVSNRVLRRYPEYLDNFLRVSFVDEELDKLYSTEL
Sbjct: 361  LDEGLVYVHRVQVTPCRVYFCGPEVNVSNRVLRRYPEYLDNFLRVSFVDEELDKLYSTEL 420

Query: 421  SPRESSSLEDGKTKIFKRILSVLRDGITIGDKKFEFLAYSSSQLRENSAWMFAPKDGITA 480
            SPRESSSLEDGKTKIFKRILSVL+DGITIGDKKFEFLAYSSSQLREN+ WMFAP++GITA
Sbjct: 421  SPRESSSLEDGKTKIFKRILSVLKDGITIGDKKFEFLAYSSSQLRENAVWMFAPRNGITA 480

Query: 481  AGIRKWMGDFRSIRNVAKYAARLGQSFGSSTETLSVGRREVEVIPDIEVESD-GVKYVFS 540
            A IRKWMGDF SIRNVAKYAARLGQSFGSSTET SV RREVEVIPDIEV+SD G+ YVFS
Sbjct: 481  AKIRKWMGDFHSIRNVAKYAARLGQSFGSSTETASVSRREVEVIPDIEVKSDAGINYVFS 540

Query: 541  DGIGKISASFARKVAQKCGIRHTPSAFQIRYAGFKGVISVDPTSSVKLSLRNSMLKYEST 600
            DGIGKISASFAR+VA+KC IRHTPSAFQIRYAGFKGVISVDPTS VKLSLRNSMLKYEST
Sbjct: 541  DGIGKISASFAREVARKCRIRHTPSAFQIRYAGFKGVISVDPTSFVKLSLRNSMLKYEST 600

Query: 601  DTKLDVLLWSKSLPCYLNRQLITLLSTLGVEDHVFEKKQKELMDQLDTIFTDSMKAQQAL 660
            DTKLDVL WS+  PCYLNRQLITLLSTLGV+D +FE KQKEL+DQLDTIF D +KAQQAL
Sbjct: 601  DTKLDVLSWSRYHPCYLNRQLITLLSTLGVQDDIFESKQKELIDQLDTIFMDPLKAQQAL 660

Query: 661  ELMSPGEITNVLKEMISCGYRPDSEPFLSMMLLTFRQSKLLELRRKSRIFIPNGRAMMGC 720
            ELMSPGE TN+LKE+ISCGYRPDSEPFL MML TFR+SKLLELRRKSRIFIPNGRAMMGC
Sbjct: 661  ELMSPGENTNILKEIISCGYRPDSEPFLYMMLYTFRESKLLELRRKSRIFIPNGRAMMGC 720

Query: 721  LDETGNLEYGEVFVQCTAHQQLQDDHIIFKRGKSNRHFIATGTVAVAKNPCLHPGDVRVL 780
            LDETGNLEYGEVFVQC+AHQQL +DHIIFKR KSN+HFI TGTV VAKNPCLHPGDVRVL
Sbjct: 721  LDETGNLEYGEVFVQCSAHQQLHNDHIIFKRSKSNQHFIVTGTVVVAKNPCLHPGDVRVL 780

Query: 781  TAVDVPSLHHMVDCVVFPQKGPRPHPNECSGSDLDGDIYFVCWDPDLIPPQQVEPMDYTP 840
            TAVDVPSLHHMVDC+VFPQKGPRPHPNECSGSDLDGDIYFVCWDPDLIPPQQVEPMDYTP
Sbjct: 781  TAVDVPSLHHMVDCLVFPQKGPRPHPNECSGSDLDGDIYFVCWDPDLIPPQQVEPMDYTP 840

Query: 841  VPSKLLDHDVTMEEVQEYFANYMVNDSLGIIANAHTAFADREPKKAMSKPCIELAKLFSI 900
            V S+LLDHDVTMEEVQEYFANYMVNDSLGIIANAHTAFAD  P+KAMS+PCI+LAKLFSI
Sbjct: 841  VLSRLLDHDVTMEEVQEYFANYMVNDSLGIIANAHTAFADSRPEKAMSEPCIKLAKLFSI 900

Query: 901  AVDFPKTGVPALIPANLRVEEYPDFMDKADKVTYQSENVLGKLFRMLDEIEPKIDIRS-- 960
            AVDFPKTGVPALI A+LRV+ YPDFMDK DK +Y+S NVLGKLFRMLD+IEP+I I+S  
Sbjct: 901  AVDFPKTGVPALISADLRVQVYPDFMDKPDKQSYKSHNVLGKLFRMLDDIEPRISIKSVK 960

Query: 961  FTRDVARQAYDPDMEVEGFEEYLDDAIYHKGNYDMRLGNLMNYYRIKNEAELISGGSLSR 1020
            FTR++ARQAYDPDMEVEGFEEYLDDA+YHK NYDMRLGNLM YY+IK EAELISG SL++
Sbjct: 961  FTREIARQAYDPDMEVEGFEEYLDDALYHKNNYDMRLGNLMKYYKIKTEAELISGVSLTK 1020

Query: 1021 SLSATKKNEAESIATAVRSLRKEARSWFNENAELHFRHGNNVYARASAWYFVTYHHSYWG 1080
            S S TKKNEAESI  AV+SLRKEAR WFNENA LHF H NN YARASAWYFVTYH+SYWG
Sbjct: 1021 SSSFTKKNEAESIIMAVKSLRKEARGWFNENAGLHFGHDNNAYARASAWYFVTYHYSYWG 1080

Query: 1081 WFDEGKDHGHLISFPWCVYDKLVRIKKQKISAR 1110
            W+ E K+  H +SFPWCVYDKL+RIKK+KI AR
Sbjct: 1081 WYGE-KNESHFLSFPWCVYDKLIRIKKRKIGAR 1110

BLAST of MC09g1024 vs. NCBI nr
Match: XP_022943176.1 (RNA-dependent RNA polymerase 1-like [Cucurbita moschata])

HSP 1 Score: 1900 bits (4921), Expect = 0.0
Identity = 934/1113 (83.92%), Postives = 1008/1113 (90.57%), Query Frame = 0

Query: 1    MGKTIQLYGFPTGVVQEEVKEFVERITGSGTIDAIKTKRSNGRGKRVCATIQFTNDEGAK 60
            MGKTIQLYGFP+GV+QE VK FVER TG G+IDAI  KRS GRGKR+ A IQF +D GAK
Sbjct: 1    MGKTIQLYGFPSGVLQESVKAFVERFTGEGSIDAINVKRSRGRGKRLYAIIQFIDDVGAK 60

Query: 61   LIIFLANGRLYYGSSYLKAKEWKQDILPNPLVFEYNFKGLRLHLGCQISKESFFVLQTEL 120
            LII LAN  L YG+SYLKA+EWKQDIL +PLVFEYNFKGL LHLGCQIS+E FFVL  E 
Sbjct: 61   LIISLANASLRYGTSYLKAREWKQDILQDPLVFEYNFKGLELHLGCQISREEFFVLWRES 120

Query: 121  NVSVDFGFDRRVLSFFISHSHVDYMLVLRYENVWQVQLHKPQGQSDVDYLLIQLFGAPRI 180
            NVSV+F F+RR L FFISH  VDYMLVLRYEN+WQV+LHKPQGQS +DYLLIQL GAPRI
Sbjct: 121  NVSVNFEFERRDLKFFISHPRVDYMLVLRYENIWQVELHKPQGQS-IDYLLIQLVGAPRI 180

Query: 181  YERNSESFGPILDDPFINFSKEIDTKWFRATDFTPSCCIGQSSGLCLEIPYGRQLPNLHD 240
            YER+++ FG I +DPF++FSKE+DTKWFRATDFTPSCCIGQS  LCLEIPYGR LPN HD
Sbjct: 181  YERDTKLFGHISEDPFLSFSKEMDTKWFRATDFTPSCCIGQSGALCLEIPYGRLLPNFHD 240

Query: 241  KFAHYFKEIKGKFTLDRGSTYSSNPNLVPIVRPPRNISLPYAILFKINLLVQNGCLPGPA 300
            KFA YF EIKGKFTL  GSTYSSN NLVP+VRPP +I LPYAILFKINLLVQ GCLPGP+
Sbjct: 241  KFA-YFNEIKGKFTLASGSTYSSNVNLVPVVRPPLSIHLPYAILFKINLLVQQGCLPGPS 300

Query: 301  LDISFYQMVDPQRNNIGFIDHALNKLYHLKECCYNPSKWLDDEYRKYFKARNPPQPPIMS 360
            LDISFY+MVDPQ +NI FID AL KLY LKECCYNPSKWL +EYRKY K  NPPQPP +S
Sbjct: 301  LDISFYEMVDPQIHNIAFIDRALRKLYDLKECCYNPSKWLGEEYRKYSKLTNPPQPPNLS 360

Query: 361  LNEGLVYVHRVQVTPCRVYFCGPEVNVSNRVLRRYPEYLDNFLRVSFVDEELDKLYSTEL 420
            L+EGLVYVHRVQVTPCRVYFCGPEVNVSNRVLRRYPEYLDNFLRVSFVDEELDKLYSTEL
Sbjct: 361  LDEGLVYVHRVQVTPCRVYFCGPEVNVSNRVLRRYPEYLDNFLRVSFVDEELDKLYSTEL 420

Query: 421  SPRESSSLEDGKTKIFKRILSVLRDGITIGDKKFEFLAYSSSQLRENSAWMFAPKDGITA 480
            SPRESSSLEDGKTKIFKRILSVL+DGITIGDKKFEFLAYSSSQLREN+ WMFAP+DGITA
Sbjct: 421  SPRESSSLEDGKTKIFKRILSVLKDGITIGDKKFEFLAYSSSQLRENAVWMFAPRDGITA 480

Query: 481  AGIRKWMGDFRSIRNVAKYAARLGQSFGSSTETLSVGRREVEVIPDIEVESD-GVKYVFS 540
            A IRKWMGDF SIRNVAKYAARLGQSFGSSTET SV RREV+VIPDIEV+SD G+ YVFS
Sbjct: 481  AKIRKWMGDFHSIRNVAKYAARLGQSFGSSTETASVSRREVKVIPDIEVKSDAGINYVFS 540

Query: 541  DGIGKISASFARKVAQKCGIRHTPSAFQIRYAGFKGVISVDPTSSVKLSLRNSMLKYEST 600
            DGIGKISASFAR+VA+KC IRHTPSAFQIRYAGFKGVISVDPTS VKLSLRNSMLKYEST
Sbjct: 541  DGIGKISASFAREVARKCHIRHTPSAFQIRYAGFKGVISVDPTSFVKLSLRNSMLKYEST 600

Query: 601  DTKLDVLLWSKSLPCYLNRQLITLLSTLGVEDHVFEKKQKELMDQLDTIFTDSMKAQQAL 660
            DTKLDVL WS+  PCYLNRQLITLLSTLGV+D +FE KQKEL+DQLDTIF D +KAQQAL
Sbjct: 601  DTKLDVLSWSRYHPCYLNRQLITLLSTLGVQDDIFESKQKELIDQLDTIFMDPLKAQQAL 660

Query: 661  ELMSPGEITNVLKEMISCGYRPDSEPFLSMMLLTFRQSKLLELRRKSRIFIPNGRAMMGC 720
            ELMSPGE TN+LKE+ISCGYRPDSEPFL MML TFR+SKLLELRRKSRIFIPNGRAMMGC
Sbjct: 661  ELMSPGENTNILKEIISCGYRPDSEPFLYMMLHTFRESKLLELRRKSRIFIPNGRAMMGC 720

Query: 721  LDETGNLEYGEVFVQCTAHQQLQDDHIIFKRGKSNRHFIATGTVAVAKNPCLHPGDVRVL 780
            LDETGNLEYGEVFVQC+AHQQL +DHIIFKR KSN+HFI TGTV VAKNPCLHPGDVRVL
Sbjct: 721  LDETGNLEYGEVFVQCSAHQQLHNDHIIFKRSKSNQHFIVTGTVVVAKNPCLHPGDVRVL 780

Query: 781  TAVDVPSLHHMVDCVVFPQKGPRPHPNECSGSDLDGDIYFVCWDPDLIPPQQVEPMDYTP 840
            TAVDVPSLHHMVDC+VFPQKGPRPHPNECSGSDLDGDIYFVCWDPDLIPPQQVEPMDYTP
Sbjct: 781  TAVDVPSLHHMVDCLVFPQKGPRPHPNECSGSDLDGDIYFVCWDPDLIPPQQVEPMDYTP 840

Query: 841  VPSKLLDHDVTMEEVQEYFANYMVNDSLGIIANAHTAFADREPKKAMSKPCIELAKLFSI 900
            VPS+LLDHDVTMEEVQEYFANYMVNDSLGIIANAHTAFAD  P+KAMS+PCI+LAKLFSI
Sbjct: 841  VPSRLLDHDVTMEEVQEYFANYMVNDSLGIIANAHTAFADSRPEKAMSEPCIKLAKLFSI 900

Query: 901  AVDFPKTGVPALIPANLRVEEYPDFMDKADKVTYQSENVLGKLFRMLDEIEPKIDIRS-- 960
            AVDFPKTGVPALI A+LRV+ YPDFMDK DK +Y+S NVLGKLFRMLD+IEP+I I+S  
Sbjct: 901  AVDFPKTGVPALISADLRVQVYPDFMDKPDKQSYKSHNVLGKLFRMLDDIEPRISIKSVK 960

Query: 961  FTRDVARQAYDPDMEVEGFEEYLDDAIYHKGNYDMRLGNLMNYYRIKNEAELISGGSLSR 1020
            FTR++ARQAYDPDMEV+GFEEYLDDA+YHK NYDMRLGNLM YY+IK EAELISG SL++
Sbjct: 961  FTREIARQAYDPDMEVKGFEEYLDDALYHKNNYDMRLGNLMKYYKIKTEAELISGVSLTK 1020

Query: 1021 SLSATKKNEAESIATAVRSLRKEARSWFNENAELHFRHGNNVYARASAWYFVTYHHSYWG 1080
            S S TKKNEAESI  AV+SLRKEAR WFNENA LHF H NN YARASAWYFVTYH+SYWG
Sbjct: 1021 SSSFTKKNEAESIIMAVKSLRKEARGWFNENAGLHFGHDNNAYARASAWYFVTYHYSYWG 1080

Query: 1081 WFDEGKDHGHLISFPWCVYDKLVRIKKQKISAR 1110
            W+ E K+  H +SFPWCVYDKL+RIKK+KI AR
Sbjct: 1081 WYGE-KNESHFLSFPWCVYDKLIRIKKRKIGAR 1110

BLAST of MC09g1024 vs. ExPASy TrEMBL
Match: A0A6J1D0F4 (RNA-dependent RNA polymerase OS=Momordica charantia OX=3673 GN=LOC111015912 PE=3 SV=1)

HSP 1 Score: 2272 bits (5887), Expect = 0.0
Identity = 1115/1115 (100.00%), Postives = 1115/1115 (100.00%), Query Frame = 0

Query: 1    MGKTIQLYGFPTGVVQEEVKEFVERITGSGTIDAIKTKRSNGRGKRVCATIQFTNDEGAK 60
            MGKTIQLYGFPTGVVQEEVKEFVERITGSGTIDAIKTKRSNGRGKRVCATIQFTNDEGAK
Sbjct: 1    MGKTIQLYGFPTGVVQEEVKEFVERITGSGTIDAIKTKRSNGRGKRVCATIQFTNDEGAK 60

Query: 61   LIIFLANGRLYYGSSYLKAKEWKQDILPNPLVFEYNFKGLRLHLGCQISKESFFVLQTEL 120
            LIIFLANGRLYYGSSYLKAKEWKQDILPNPLVFEYNFKGLRLHLGCQISKESFFVLQTEL
Sbjct: 61   LIIFLANGRLYYGSSYLKAKEWKQDILPNPLVFEYNFKGLRLHLGCQISKESFFVLQTEL 120

Query: 121  NVSVDFGFDRRVLSFFISHSHVDYMLVLRYENVWQVQLHKPQGQSDVDYLLIQLFGAPRI 180
            NVSVDFGFDRRVLSFFISHSHVDYMLVLRYENVWQVQLHKPQGQSDVDYLLIQLFGAPRI
Sbjct: 121  NVSVDFGFDRRVLSFFISHSHVDYMLVLRYENVWQVQLHKPQGQSDVDYLLIQLFGAPRI 180

Query: 181  YERNSESFGPILDDPFINFSKEIDTKWFRATDFTPSCCIGQSSGLCLEIPYGRQLPNLHD 240
            YERNSESFGPILDDPFINFSKEIDTKWFRATDFTPSCCIGQSSGLCLEIPYGRQLPNLHD
Sbjct: 181  YERNSESFGPILDDPFINFSKEIDTKWFRATDFTPSCCIGQSSGLCLEIPYGRQLPNLHD 240

Query: 241  KFAHYFKEIKGKFTLDRGSTYSSNPNLVPIVRPPRNISLPYAILFKINLLVQNGCLPGPA 300
            KFAHYFKEIKGKFTLDRGSTYSSNPNLVPIVRPPRNISLPYAILFKINLLVQNGCLPGPA
Sbjct: 241  KFAHYFKEIKGKFTLDRGSTYSSNPNLVPIVRPPRNISLPYAILFKINLLVQNGCLPGPA 300

Query: 301  LDISFYQMVDPQRNNIGFIDHALNKLYHLKECCYNPSKWLDDEYRKYFKARNPPQPPIMS 360
            LDISFYQMVDPQRNNIGFIDHALNKLYHLKECCYNPSKWLDDEYRKYFKARNPPQPPIMS
Sbjct: 301  LDISFYQMVDPQRNNIGFIDHALNKLYHLKECCYNPSKWLDDEYRKYFKARNPPQPPIMS 360

Query: 361  LNEGLVYVHRVQVTPCRVYFCGPEVNVSNRVLRRYPEYLDNFLRVSFVDEELDKLYSTEL 420
            LNEGLVYVHRVQVTPCRVYFCGPEVNVSNRVLRRYPEYLDNFLRVSFVDEELDKLYSTEL
Sbjct: 361  LNEGLVYVHRVQVTPCRVYFCGPEVNVSNRVLRRYPEYLDNFLRVSFVDEELDKLYSTEL 420

Query: 421  SPRESSSLEDGKTKIFKRILSVLRDGITIGDKKFEFLAYSSSQLRENSAWMFAPKDGITA 480
            SPRESSSLEDGKTKIFKRILSVLRDGITIGDKKFEFLAYSSSQLRENSAWMFAPKDGITA
Sbjct: 421  SPRESSSLEDGKTKIFKRILSVLRDGITIGDKKFEFLAYSSSQLRENSAWMFAPKDGITA 480

Query: 481  AGIRKWMGDFRSIRNVAKYAARLGQSFGSSTETLSVGRREVEVIPDIEVESDGVKYVFSD 540
            AGIRKWMGDFRSIRNVAKYAARLGQSFGSSTETLSVGRREVEVIPDIEVESDGVKYVFSD
Sbjct: 481  AGIRKWMGDFRSIRNVAKYAARLGQSFGSSTETLSVGRREVEVIPDIEVESDGVKYVFSD 540

Query: 541  GIGKISASFARKVAQKCGIRHTPSAFQIRYAGFKGVISVDPTSSVKLSLRNSMLKYESTD 600
            GIGKISASFARKVAQKCGIRHTPSAFQIRYAGFKGVISVDPTSSVKLSLRNSMLKYESTD
Sbjct: 541  GIGKISASFARKVAQKCGIRHTPSAFQIRYAGFKGVISVDPTSSVKLSLRNSMLKYESTD 600

Query: 601  TKLDVLLWSKSLPCYLNRQLITLLSTLGVEDHVFEKKQKELMDQLDTIFTDSMKAQQALE 660
            TKLDVLLWSKSLPCYLNRQLITLLSTLGVEDHVFEKKQKELMDQLDTIFTDSMKAQQALE
Sbjct: 601  TKLDVLLWSKSLPCYLNRQLITLLSTLGVEDHVFEKKQKELMDQLDTIFTDSMKAQQALE 660

Query: 661  LMSPGEITNVLKEMISCGYRPDSEPFLSMMLLTFRQSKLLELRRKSRIFIPNGRAMMGCL 720
            LMSPGEITNVLKEMISCGYRPDSEPFLSMMLLTFRQSKLLELRRKSRIFIPNGRAMMGCL
Sbjct: 661  LMSPGEITNVLKEMISCGYRPDSEPFLSMMLLTFRQSKLLELRRKSRIFIPNGRAMMGCL 720

Query: 721  DETGNLEYGEVFVQCTAHQQLQDDHIIFKRGKSNRHFIATGTVAVAKNPCLHPGDVRVLT 780
            DETGNLEYGEVFVQCTAHQQLQDDHIIFKRGKSNRHFIATGTVAVAKNPCLHPGDVRVLT
Sbjct: 721  DETGNLEYGEVFVQCTAHQQLQDDHIIFKRGKSNRHFIATGTVAVAKNPCLHPGDVRVLT 780

Query: 781  AVDVPSLHHMVDCVVFPQKGPRPHPNECSGSDLDGDIYFVCWDPDLIPPQQVEPMDYTPV 840
            AVDVPSLHHMVDCVVFPQKGPRPHPNECSGSDLDGDIYFVCWDPDLIPPQQVEPMDYTPV
Sbjct: 781  AVDVPSLHHMVDCVVFPQKGPRPHPNECSGSDLDGDIYFVCWDPDLIPPQQVEPMDYTPV 840

Query: 841  PSKLLDHDVTMEEVQEYFANYMVNDSLGIIANAHTAFADREPKKAMSKPCIELAKLFSIA 900
            PSKLLDHDVTMEEVQEYFANYMVNDSLGIIANAHTAFADREPKKAMSKPCIELAKLFSIA
Sbjct: 841  PSKLLDHDVTMEEVQEYFANYMVNDSLGIIANAHTAFADREPKKAMSKPCIELAKLFSIA 900

Query: 901  VDFPKTGVPALIPANLRVEEYPDFMDKADKVTYQSENVLGKLFRMLDEIEPKIDIRSFTR 960
            VDFPKTGVPALIPANLRVEEYPDFMDKADKVTYQSENVLGKLFRMLDEIEPKIDIRSFTR
Sbjct: 901  VDFPKTGVPALIPANLRVEEYPDFMDKADKVTYQSENVLGKLFRMLDEIEPKIDIRSFTR 960

Query: 961  DVARQAYDPDMEVEGFEEYLDDAIYHKGNYDMRLGNLMNYYRIKNEAELISGGSLSRSLS 1020
            DVARQAYDPDMEVEGFEEYLDDAIYHKGNYDMRLGNLMNYYRIKNEAELISGGSLSRSLS
Sbjct: 961  DVARQAYDPDMEVEGFEEYLDDAIYHKGNYDMRLGNLMNYYRIKNEAELISGGSLSRSLS 1020

Query: 1021 ATKKNEAESIATAVRSLRKEARSWFNENAELHFRHGNNVYARASAWYFVTYHHSYWGWFD 1080
            ATKKNEAESIATAVRSLRKEARSWFNENAELHFRHGNNVYARASAWYFVTYHHSYWGWFD
Sbjct: 1021 ATKKNEAESIATAVRSLRKEARSWFNENAELHFRHGNNVYARASAWYFVTYHHSYWGWFD 1080

Query: 1081 EGKDHGHLISFPWCVYDKLVRIKKQKISARNARRR 1115
            EGKDHGHLISFPWCVYDKLVRIKKQKISARNARRR
Sbjct: 1081 EGKDHGHLISFPWCVYDKLVRIKKQKISARNARRR 1115

BLAST of MC09g1024 vs. ExPASy TrEMBL
Match: A0A6J1FR02 (RNA-dependent RNA polymerase OS=Cucurbita moschata OX=3662 GN=LOC111447986 PE=3 SV=1)

HSP 1 Score: 1900 bits (4921), Expect = 0.0
Identity = 934/1113 (83.92%), Postives = 1008/1113 (90.57%), Query Frame = 0

Query: 1    MGKTIQLYGFPTGVVQEEVKEFVERITGSGTIDAIKTKRSNGRGKRVCATIQFTNDEGAK 60
            MGKTIQLYGFP+GV+QE VK FVER TG G+IDAI  KRS GRGKR+ A IQF +D GAK
Sbjct: 1    MGKTIQLYGFPSGVLQESVKAFVERFTGEGSIDAINVKRSRGRGKRLYAIIQFIDDVGAK 60

Query: 61   LIIFLANGRLYYGSSYLKAKEWKQDILPNPLVFEYNFKGLRLHLGCQISKESFFVLQTEL 120
            LII LAN  L YG+SYLKA+EWKQDIL +PLVFEYNFKGL LHLGCQIS+E FFVL  E 
Sbjct: 61   LIISLANASLRYGTSYLKAREWKQDILQDPLVFEYNFKGLELHLGCQISREEFFVLWRES 120

Query: 121  NVSVDFGFDRRVLSFFISHSHVDYMLVLRYENVWQVQLHKPQGQSDVDYLLIQLFGAPRI 180
            NVSV+F F+RR L FFISH  VDYMLVLRYEN+WQV+LHKPQGQS +DYLLIQL GAPRI
Sbjct: 121  NVSVNFEFERRDLKFFISHPRVDYMLVLRYENIWQVELHKPQGQS-IDYLLIQLVGAPRI 180

Query: 181  YERNSESFGPILDDPFINFSKEIDTKWFRATDFTPSCCIGQSSGLCLEIPYGRQLPNLHD 240
            YER+++ FG I +DPF++FSKE+DTKWFRATDFTPSCCIGQS  LCLEIPYGR LPN HD
Sbjct: 181  YERDTKLFGHISEDPFLSFSKEMDTKWFRATDFTPSCCIGQSGALCLEIPYGRLLPNFHD 240

Query: 241  KFAHYFKEIKGKFTLDRGSTYSSNPNLVPIVRPPRNISLPYAILFKINLLVQNGCLPGPA 300
            KFA YF EIKGKFTL  GSTYSSN NLVP+VRPP +I LPYAILFKINLLVQ GCLPGP+
Sbjct: 241  KFA-YFNEIKGKFTLASGSTYSSNVNLVPVVRPPLSIHLPYAILFKINLLVQQGCLPGPS 300

Query: 301  LDISFYQMVDPQRNNIGFIDHALNKLYHLKECCYNPSKWLDDEYRKYFKARNPPQPPIMS 360
            LDISFY+MVDPQ +NI FID AL KLY LKECCYNPSKWL +EYRKY K  NPPQPP +S
Sbjct: 301  LDISFYEMVDPQIHNIAFIDRALRKLYDLKECCYNPSKWLGEEYRKYSKLTNPPQPPNLS 360

Query: 361  LNEGLVYVHRVQVTPCRVYFCGPEVNVSNRVLRRYPEYLDNFLRVSFVDEELDKLYSTEL 420
            L+EGLVYVHRVQVTPCRVYFCGPEVNVSNRVLRRYPEYLDNFLRVSFVDEELDKLYSTEL
Sbjct: 361  LDEGLVYVHRVQVTPCRVYFCGPEVNVSNRVLRRYPEYLDNFLRVSFVDEELDKLYSTEL 420

Query: 421  SPRESSSLEDGKTKIFKRILSVLRDGITIGDKKFEFLAYSSSQLRENSAWMFAPKDGITA 480
            SPRESSSLEDGKTKIFKRILSVL+DGITIGDKKFEFLAYSSSQLREN+ WMFAP+DGITA
Sbjct: 421  SPRESSSLEDGKTKIFKRILSVLKDGITIGDKKFEFLAYSSSQLRENAVWMFAPRDGITA 480

Query: 481  AGIRKWMGDFRSIRNVAKYAARLGQSFGSSTETLSVGRREVEVIPDIEVESD-GVKYVFS 540
            A IRKWMGDF SIRNVAKYAARLGQSFGSSTET SV RREV+VIPDIEV+SD G+ YVFS
Sbjct: 481  AKIRKWMGDFHSIRNVAKYAARLGQSFGSSTETASVSRREVKVIPDIEVKSDAGINYVFS 540

Query: 541  DGIGKISASFARKVAQKCGIRHTPSAFQIRYAGFKGVISVDPTSSVKLSLRNSMLKYEST 600
            DGIGKISASFAR+VA+KC IRHTPSAFQIRYAGFKGVISVDPTS VKLSLRNSMLKYEST
Sbjct: 541  DGIGKISASFAREVARKCHIRHTPSAFQIRYAGFKGVISVDPTSFVKLSLRNSMLKYEST 600

Query: 601  DTKLDVLLWSKSLPCYLNRQLITLLSTLGVEDHVFEKKQKELMDQLDTIFTDSMKAQQAL 660
            DTKLDVL WS+  PCYLNRQLITLLSTLGV+D +FE KQKEL+DQLDTIF D +KAQQAL
Sbjct: 601  DTKLDVLSWSRYHPCYLNRQLITLLSTLGVQDDIFESKQKELIDQLDTIFMDPLKAQQAL 660

Query: 661  ELMSPGEITNVLKEMISCGYRPDSEPFLSMMLLTFRQSKLLELRRKSRIFIPNGRAMMGC 720
            ELMSPGE TN+LKE+ISCGYRPDSEPFL MML TFR+SKLLELRRKSRIFIPNGRAMMGC
Sbjct: 661  ELMSPGENTNILKEIISCGYRPDSEPFLYMMLHTFRESKLLELRRKSRIFIPNGRAMMGC 720

Query: 721  LDETGNLEYGEVFVQCTAHQQLQDDHIIFKRGKSNRHFIATGTVAVAKNPCLHPGDVRVL 780
            LDETGNLEYGEVFVQC+AHQQL +DHIIFKR KSN+HFI TGTV VAKNPCLHPGDVRVL
Sbjct: 721  LDETGNLEYGEVFVQCSAHQQLHNDHIIFKRSKSNQHFIVTGTVVVAKNPCLHPGDVRVL 780

Query: 781  TAVDVPSLHHMVDCVVFPQKGPRPHPNECSGSDLDGDIYFVCWDPDLIPPQQVEPMDYTP 840
            TAVDVPSLHHMVDC+VFPQKGPRPHPNECSGSDLDGDIYFVCWDPDLIPPQQVEPMDYTP
Sbjct: 781  TAVDVPSLHHMVDCLVFPQKGPRPHPNECSGSDLDGDIYFVCWDPDLIPPQQVEPMDYTP 840

Query: 841  VPSKLLDHDVTMEEVQEYFANYMVNDSLGIIANAHTAFADREPKKAMSKPCIELAKLFSI 900
            VPS+LLDHDVTMEEVQEYFANYMVNDSLGIIANAHTAFAD  P+KAMS+PCI+LAKLFSI
Sbjct: 841  VPSRLLDHDVTMEEVQEYFANYMVNDSLGIIANAHTAFADSRPEKAMSEPCIKLAKLFSI 900

Query: 901  AVDFPKTGVPALIPANLRVEEYPDFMDKADKVTYQSENVLGKLFRMLDEIEPKIDIRS-- 960
            AVDFPKTGVPALI A+LRV+ YPDFMDK DK +Y+S NVLGKLFRMLD+IEP+I I+S  
Sbjct: 901  AVDFPKTGVPALISADLRVQVYPDFMDKPDKQSYKSHNVLGKLFRMLDDIEPRISIKSVK 960

Query: 961  FTRDVARQAYDPDMEVEGFEEYLDDAIYHKGNYDMRLGNLMNYYRIKNEAELISGGSLSR 1020
            FTR++ARQAYDPDMEV+GFEEYLDDA+YHK NYDMRLGNLM YY+IK EAELISG SL++
Sbjct: 961  FTREIARQAYDPDMEVKGFEEYLDDALYHKNNYDMRLGNLMKYYKIKTEAELISGVSLTK 1020

Query: 1021 SLSATKKNEAESIATAVRSLRKEARSWFNENAELHFRHGNNVYARASAWYFVTYHHSYWG 1080
            S S TKKNEAESI  AV+SLRKEAR WFNENA LHF H NN YARASAWYFVTYH+SYWG
Sbjct: 1021 SSSFTKKNEAESIIMAVKSLRKEARGWFNENAGLHFGHDNNAYARASAWYFVTYHYSYWG 1080

Query: 1081 WFDEGKDHGHLISFPWCVYDKLVRIKKQKISAR 1110
            W+ E K+  H +SFPWCVYDKL+RIKK+KI AR
Sbjct: 1081 WYGE-KNESHFLSFPWCVYDKLIRIKKRKIGAR 1110

BLAST of MC09g1024 vs. ExPASy TrEMBL
Match: E9NWK7 (RNA-dependent RNA polymerase OS=Cucumis sativus OX=3659 GN=Csa_5G239640 PE=2 SV=1)

HSP 1 Score: 1893 bits (4903), Expect = 0.0
Identity = 932/1114 (83.66%), Postives = 1009/1114 (90.57%), Query Frame = 0

Query: 1    MGKTIQLYGFPTGVVQEEVKEFVERITGSGTIDAIKTKRSNGRGKRVCATIQFTNDEGAK 60
            MGKTIQL+GFP+GV+QE VK FVE ITG+GTIDAI TKRS G G+RV A IQFT++EGAK
Sbjct: 1    MGKTIQLFGFPSGVLQESVKTFVEGITGTGTIDAINTKRSKGGGRRVYAIIQFTDEEGAK 60

Query: 61   LIIFLANGRLYYGSSYLKAKEWKQDILPNPLVFEYNFKGLRLHLGCQISKESFFVLQTEL 120
             II  A  RL YG+SYLKA+E K DILP+PLVF+YNFK LRLHLGCQISKESF VL TE 
Sbjct: 61   SIISKATERLCYGTSYLKAREMKHDILPDPLVFDYNFKALRLHLGCQISKESFSVLWTES 120

Query: 121  NVSVDFGFDRRVLSFFISHSHVDYMLVLRYENVWQVQLHKPQGQSDVDYLLIQLFGAPRI 180
            NVSVDFGF+ R L FFIS+  VDYMLVLRYEN+WQV+LHKP GQS VDYLLIQLFGAPRI
Sbjct: 121  NVSVDFGFELRKLYFFISYPRVDYMLVLRYENIWQVELHKPHGQS-VDYLLIQLFGAPRI 180

Query: 181  YERNSESFGPILDDPFINFSKEIDTKWFRATDFTPSCCIGQSSGLCLEIPYGRQLPNLHD 240
            YER++ SFG I +DPF+NFS EIDT+WFRATDFTPSC IGQS+ LCLEIPYGRQLPN HD
Sbjct: 181  YERDARSFGLITEDPFLNFSTEIDTQWFRATDFTPSCSIGQSAALCLEIPYGRQLPNFHD 240

Query: 241  KFAHYFKEIKGKFTLDRGSTYSSNPNLVPIVRPPRNISLPYAILFKINLLVQNGCLPGPA 300
            KFA YFKEIKGKFTL  GSTYSSN NLVP+V PPR I+LPY ILFKINLLVQ GCLPGPA
Sbjct: 241  KFA-YFKEIKGKFTLVSGSTYSSNVNLVPVVTPPRTINLPYTILFKINLLVQQGCLPGPA 300

Query: 301  LDISFYQMVDPQRNNIGFIDHALNKLYHLKECCYNPSKWLDDEYRKYFKARNPPQPPIMS 360
            LDISFYQMVD Q  N   IDHAL KL HLKECCYNPSKWLD+EYRKYFK +NPPQPPI++
Sbjct: 301  LDISFYQMVDSQIYNTAVIDHALKKLLHLKECCYNPSKWLDEEYRKYFKLKNPPQPPILT 360

Query: 361  LNEGLVYVHRVQVTPCRVYFCGPEVNVSNRVLRRYPEYLDNFLRVSFVDEELDKLYSTEL 420
            LNEGLVYVHRVQVTPC+VYFCGPEVN+SNRVLRRYP+Y+DNFLRVSFVDEEL K+YSTEL
Sbjct: 361  LNEGLVYVHRVQVTPCKVYFCGPEVNISNRVLRRYPDYIDNFLRVSFVDEELGKMYSTEL 420

Query: 421  SPRESSSLEDGKTKIFKRILSVLRDGITIGDKKFEFLAYSSSQLRENSAWMFAPKDGITA 480
            SPR SSSLEDGKTKIFKRILSVLRDGITIGDKKFEFLAYSSSQLREN+AWMFAPK+ +TA
Sbjct: 421  SPRASSSLEDGKTKIFKRILSVLRDGITIGDKKFEFLAYSSSQLRENAAWMFAPKNELTA 480

Query: 481  AGIRKWMGDFRSIRNVAKYAARLGQSFGSSTETLSVGRREVEVIPDIEVES-DGVKYVFS 540
            A IR+WMGDF +IRNVAKYAARLGQSFGSSTETLSV RREV+VIPDIEVES  GV YVFS
Sbjct: 481  AKIRQWMGDFHNIRNVAKYAARLGQSFGSSTETLSVSRREVKVIPDIEVESGSGVNYVFS 540

Query: 541  DGIGKISASFARKVAQKCGIRHTPSAFQIRYAGFKGVISVDPTSSVKLSLRNSMLKYEST 600
            DGIGKI+ASFARKVA+KCGIRHTPSAFQIRYAGFKGVISVDPTSSVKLSLRNSMLKYEST
Sbjct: 541  DGIGKIAASFARKVAKKCGIRHTPSAFQIRYAGFKGVISVDPTSSVKLSLRNSMLKYEST 600

Query: 601  DTKLDVLLWSKSLPCYLNRQLITLLSTLGVEDHVFEKKQKELMDQLDTIFTDSMKAQQAL 660
            DTKLDVL WSK  PC+LNRQLITLLSTLGV+DHVFE KQ+EL+D+LDTIF+D +KAQQAL
Sbjct: 601  DTKLDVLSWSKYHPCFLNRQLITLLSTLGVQDHVFESKQQELIDELDTIFSDPLKAQQAL 660

Query: 661  ELMSPGEITNVLKEMISCGYRPDSEPFLSMMLLTFRQSKLLELRRKSRIFIPNGRAMMGC 720
            ELMSPGE T +LKEM+ CGY+PDSEPFL MML TFR+SKL+ELR KSRIFIPNGRAMMGC
Sbjct: 661  ELMSPGENTKILKEMMLCGYKPDSEPFLRMMLHTFRESKLMELRMKSRIFIPNGRAMMGC 720

Query: 721  LDETGNLEYGEVFVQCTAHQQLQDDHIIFKRGKSNRHFIATGTVAVAKNPCLHPGDVRVL 780
            LDET NLEYGEVFVQC+AHQQL DD +IFKR KSNRHFI TGTV VAKNPCLHPGDVRVL
Sbjct: 721  LDETRNLEYGEVFVQCSAHQQLHDDRVIFKRIKSNRHFIVTGTVVVAKNPCLHPGDVRVL 780

Query: 781  TAVDVPSLHHMVDCVVFPQKGPRPHPNECSGSDLDGDIYFVCWDPDLIPPQQVEPMDYTP 840
            TAVDVPSLHHM+DCVVFPQKG RPHPNECSGSDLDGDIYFVCWDPDLIPPQQVEPMDYTP
Sbjct: 781  TAVDVPSLHHMIDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDPDLIPPQQVEPMDYTP 840

Query: 841  VPSKLLDHDVTMEEVQEYFANYMVNDSLGIIANAHTAFADREPKKAMSKPCIELAKLFSI 900
            VPS++LDHDVTMEEVQEYFANYMVNDSLGIIANAHTAFAD+EPKKAMS PCI+LAKLFSI
Sbjct: 841  VPSQVLDHDVTMEEVQEYFANYMVNDSLGIIANAHTAFADKEPKKAMSNPCIQLAKLFSI 900

Query: 901  AVDFPKTGVPALIPANLRVEEYPDFMDKADKVTYQSENVLGKLFRMLDEIEPKI-DIRSF 960
            AVDFPKTGVPALIPANLRV+EYPDFMDKADKVTY+SENVLGKLFRMLD I P I +IRSF
Sbjct: 901  AVDFPKTGVPALIPANLRVKEYPDFMDKADKVTYESENVLGKLFRMLDSIGPNIKNIRSF 960

Query: 961  --TRDVARQAYDPDMEVEGFEEYLDDAIYHKGNYDMRLGNLMNYYRIKNEAELISGGSLS 1020
              T ++ARQ YDPDMEVEGFEEYLDDAIYHK NYDMRLGNLM+Y++IK EAELISGGSL+
Sbjct: 961  NYTPEMARQDYDPDMEVEGFEEYLDDAIYHKNNYDMRLGNLMHYHKIKTEAELISGGSLT 1020

Query: 1021 RSLSATKKNEAESIATAVRSLRKEARSWFNENAELHFRHGNNVYARASAWYFVTYHHSYW 1080
             SLS T KNEAESI  AV+SLRKEAR WFNE A+LH+ H  NVYARASAWYFVTYHH+YW
Sbjct: 1021 SSLSFTMKNEAESIILAVKSLRKEARGWFNEKADLHYGHHTNVYARASAWYFVTYHHTYW 1080

Query: 1081 GWFDEGKDHGHLISFPWCVYDKLVRIKKQKISAR 1110
            GW D  K+HGH +SFPWCVYDKL+RIK +KI+ R
Sbjct: 1081 GWSDGRKNHGHFLSFPWCVYDKLIRIKHRKINCR 1112

BLAST of MC09g1024 vs. ExPASy TrEMBL
Match: A0A6J1K2Q9 (RNA-dependent RNA polymerase OS=Cucurbita maxima OX=3661 GN=LOC111490531 PE=3 SV=1)

HSP 1 Score: 1885 bits (4882), Expect = 0.0
Identity = 931/1113 (83.65%), Postives = 1003/1113 (90.12%), Query Frame = 0

Query: 1    MGKTIQLYGFPTGVVQEEVKEFVERITGSGTIDAIKTKRSNGRGKRVCATIQFTNDEGAK 60
            MGKTIQLYGFP+GV+QE VK FVER TG G+IDAI  KRS GRGKR+ A IQF +D GAK
Sbjct: 1    MGKTIQLYGFPSGVLQESVKAFVERFTGEGSIDAINVKRSRGRGKRLYAIIQFIDDVGAK 60

Query: 61   LIIFLANGRLYYGSSYLKAKEWKQDILPNPLVFEYNFKGLRLHLGCQISKESFFVLQTEL 120
            LII LAN  L YG+S LKA+EWKQDIL +PLVFEYNFKGL LHLGCQIS+E FFVL TE 
Sbjct: 61   LIISLANASLRYGTSSLKAREWKQDILQDPLVFEYNFKGLELHLGCQISREEFFVLWTES 120

Query: 121  NVSVDFGFDRRVLSFFISHSHVDYMLVLRYENVWQVQLHKPQGQSDVDYLLIQLFGAPRI 180
            NVSV+F F+RR L FFISH  VDYMLVLRYEN+WQV+LHKP GQS +DYLLIQL GAPRI
Sbjct: 121  NVSVNFEFERRDLKFFISHPLVDYMLVLRYENIWQVELHKPPGQS-IDYLLIQLVGAPRI 180

Query: 181  YERNSESFGPILDDPFINFSKEIDTKWFRATDFTPSCCIGQSSGLCLEIPYGRQLPNLHD 240
            YER+++ FG I +DPF++FSKE+DT+WFRATDFTPSCCIGQS  LCLEIPYGRQLPN HD
Sbjct: 181  YERDTKLFGHISEDPFLSFSKEMDTEWFRATDFTPSCCIGQSGALCLEIPYGRQLPNFHD 240

Query: 241  KFAHYFKEIKGKFTLDRGSTYSSNPNLVPIVRPPRNISLPYAILFKINLLVQNGCLPGPA 300
            KFA YFKEIKGKFTL  GSTYSSN NLVP+VRPP +I LPYAILFKINLLVQ GCLPGPA
Sbjct: 241  KFA-YFKEIKGKFTLATGSTYSSNVNLVPVVRPPLSIHLPYAILFKINLLVQQGCLPGPA 300

Query: 301  LDISFYQMVDPQRNNIGFIDHALNKLYHLKECCYNPSKWLDDEYRKYFKARNPPQPPIMS 360
            LDISFY+MVDPQ +NI FID AL KLY LKECCYNPSKWL +EYRKY K  NPPQPP +S
Sbjct: 301  LDISFYEMVDPQIHNIAFIDRALRKLYDLKECCYNPSKWLGEEYRKYSKLTNPPQPPNLS 360

Query: 361  LNEGLVYVHRVQVTPCRVYFCGPEVNVSNRVLRRYPEYLDNFLRVSFVDEELDKLYSTEL 420
            L+EGLVYVHRVQVTPCRVYFCGPEVNVSNRVLRRYPEYLDNFLRVSFVDEELD+LYSTEL
Sbjct: 361  LDEGLVYVHRVQVTPCRVYFCGPEVNVSNRVLRRYPEYLDNFLRVSFVDEELDRLYSTEL 420

Query: 421  SPRESSSLEDGKTKIFKRILSVLRDGITIGDKKFEFLAYSSSQLRENSAWMFAPKDGITA 480
            SPRESSSL DGKTKIFKRILSVL+DGITIGDKKFEFLAYSSSQLREN+ WMFAP+DGITA
Sbjct: 421  SPRESSSLGDGKTKIFKRILSVLKDGITIGDKKFEFLAYSSSQLRENAVWMFAPRDGITA 480

Query: 481  AGIRKWMGDFRSIRNVAKYAARLGQSFGSSTETLSVGRREVEVIPDIEVESD-GVKYVFS 540
            A IRKWMGDF SIRNVAKYAARLGQSFGSSTET SV RREVEVIPDIEVESD G+ YVFS
Sbjct: 481  AKIRKWMGDFHSIRNVAKYAARLGQSFGSSTETASVSRREVEVIPDIEVESDAGINYVFS 540

Query: 541  DGIGKISASFARKVAQKCGIRHTPSAFQIRYAGFKGVISVDPTSSVKLSLRNSMLKYEST 600
            DGIGKISASFAR+VA+KC IRHTPSAFQIRYAGFKGVISVDPTS VKLSLRNSMLKYEST
Sbjct: 541  DGIGKISASFAREVARKCRIRHTPSAFQIRYAGFKGVISVDPTSFVKLSLRNSMLKYEST 600

Query: 601  DTKLDVLLWSKSLPCYLNRQLITLLSTLGVEDHVFEKKQKELMDQLDTIFTDSMKAQQAL 660
            D KLDVL WS+  PCYLNRQLITLLSTLGV+D +FE KQKEL+DQLDTIF + +KAQQAL
Sbjct: 601  DMKLDVLSWSRYHPCYLNRQLITLLSTLGVQDDIFESKQKELIDQLDTIFMNPLKAQQAL 660

Query: 661  ELMSPGEITNVLKEMISCGYRPDSEPFLSMMLLTFRQSKLLELRRKSRIFIPNGRAMMGC 720
            ELMSPGE TN+LKE+ISCGYRPDSEPFL MML TFR+SKLLELRRKSRIFIPNGRAMMGC
Sbjct: 661  ELMSPGENTNILKEIISCGYRPDSEPFLYMMLHTFRESKLLELRRKSRIFIPNGRAMMGC 720

Query: 721  LDETGNLEYGEVFVQCTAHQQLQDDHIIFKRGKSNRHFIATGTVAVAKNPCLHPGDVRVL 780
            LDETGNLEYGEVFVQC+AHQQL +DHIIFKR KSN+HFI TGTV VAKNPCLHPGDVRVL
Sbjct: 721  LDETGNLEYGEVFVQCSAHQQLHNDHIIFKRSKSNQHFIVTGTVVVAKNPCLHPGDVRVL 780

Query: 781  TAVDVPSLHHMVDCVVFPQKGPRPHPNECSGSDLDGDIYFVCWDPDLIPPQQVEPMDYTP 840
            TAVDVP+LHHMVDC+VFPQKGPRPHPNECSGSDLDGDIYFVCWDPDLIP QQVEPMDYTP
Sbjct: 781  TAVDVPALHHMVDCLVFPQKGPRPHPNECSGSDLDGDIYFVCWDPDLIPHQQVEPMDYTP 840

Query: 841  VPSKLLDHDVTMEEVQEYFANYMVNDSLGIIANAHTAFADREPKKAMSKPCIELAKLFSI 900
            V S+LLDHDVTMEEVQEYFANYMVNDSLGIIANAHTAFAD  P+KAMS+PCI+LAKLFSI
Sbjct: 841  VLSRLLDHDVTMEEVQEYFANYMVNDSLGIIANAHTAFADSWPEKAMSEPCIKLAKLFSI 900

Query: 901  AVDFPKTGVPALIPANLRVEEYPDFMDKADKVTYQSENVLGKLFRMLDEIEPKIDIRS-- 960
            AVDFPKTGVPALI A+LRV+ YPDFMDK DK  Y+S NVLGKLFRMLD+IEP+I I+S  
Sbjct: 901  AVDFPKTGVPALISADLRVQVYPDFMDKPDKQRYKSHNVLGKLFRMLDDIEPRISIKSVK 960

Query: 961  FTRDVARQAYDPDMEVEGFEEYLDDAIYHKGNYDMRLGNLMNYYRIKNEAELISGGSLSR 1020
            FTR++ARQAYDPDMEVEGFEEYLDDA+YHK NYDMRLGNLM YY+IK EAELISG SL++
Sbjct: 961  FTREIARQAYDPDMEVEGFEEYLDDALYHKNNYDMRLGNLMKYYKIKTEAELISGVSLTK 1020

Query: 1021 SLSATKKNEAESIATAVRSLRKEARSWFNENAELHFRHGNNVYARASAWYFVTYHHSYWG 1080
            S S TKKNEAESI  AV+SLRKEAR WFNENA LHF H NN YARASAWYFVTYH+SYWG
Sbjct: 1021 SSSFTKKNEAESIIMAVKSLRKEARGWFNENAGLHFGHDNNAYARASAWYFVTYHYSYWG 1080

Query: 1081 WFDEGKDHGHLISFPWCVYDKLVRIKKQKISAR 1110
            WF E K+  H +SFPWCVYDKL+RIKK+KI  R
Sbjct: 1081 WFGE-KNESHFLSFPWCVYDKLIRIKKRKIGPR 1110

BLAST of MC09g1024 vs. ExPASy TrEMBL
Match: H3K3Y9 (RNA-dependent RNA polymerase OS=Cucumis sativus OX=3659 GN=RDR1 PE=2 SV=1)

HSP 1 Score: 1883 bits (4878), Expect = 0.0
Identity = 929/1114 (83.39%), Postives = 1005/1114 (90.22%), Query Frame = 0

Query: 1    MGKTIQLYGFPTGVVQEEVKEFVERITGSGTIDAIKTKRSNGRGKRVCATIQFTNDEGAK 60
            MGKTIQL+GFP+GV+QE VK FVE ITG+GTIDAI TKRS G G+RV A IQFT++EGAK
Sbjct: 1    MGKTIQLFGFPSGVLQESVKTFVEGITGTGTIDAINTKRSKGGGRRVYAIIQFTDEEGAK 60

Query: 61   LIIFLANGRLYYGSSYLKAKEWKQDILPNPLVFEYNFKGLRLHLGCQISKESFFVLQTEL 120
             II  A  RL YG+SYLKA+E K DILP+PLVF+YNFK LRLHLGCQISKESF VL TE 
Sbjct: 61   SIISKATERLCYGTSYLKAREMKHDILPDPLVFDYNFKALRLHLGCQISKESFSVLWTES 120

Query: 121  NVSVDFGFDRRVLSFFISHSHVDYMLVLRYENVWQVQLHKPQGQSDVDYLLIQLFGAPRI 180
            NVSVDFGFD R L FFIS+  VDYMLVLRYEN+WQV+LHKP GQS VDYLLIQLFGAPRI
Sbjct: 121  NVSVDFGFDVRKLYFFISYPRVDYMLVLRYENIWQVELHKPHGQS-VDYLLIQLFGAPRI 180

Query: 181  YERNSESFGPILDDPFINFSKEIDTKWFRATDFTPSCCIGQSSGLCLEIPYGRQLPNLHD 240
            YER++ SFG I +DPF+NFS EIDT+WFRATDFTPSC IGQS+ LCLEI YGRQLPN HD
Sbjct: 181  YERDARSFGLITEDPFLNFSTEIDTQWFRATDFTPSCSIGQSAALCLEILYGRQLPNFHD 240

Query: 241  KFAHYFKEIKGKFTLDRGSTYSSNPNLVPIVRPPRNISLPYAILFKINLLVQNGCLPGPA 300
            KFA YFKEIKGKFTL  GSTYSSN NLVP+V PPR I+LPY ILFKINLLVQ GCLPGPA
Sbjct: 241  KFA-YFKEIKGKFTLVSGSTYSSNVNLVPVVTPPRTINLPYTILFKINLLVQQGCLPGPA 300

Query: 301  LDISFYQMVDPQRNNIGFIDHALNKLYHLKECCYNPSKWLDDEYRKYFKARNPPQPPIMS 360
            LDISFYQMVD Q  N   IDHAL KL HLKECCYNPSKWLD+EYRKYFK +NPPQPPI++
Sbjct: 301  LDISFYQMVDSQIYNTAVIDHALKKLLHLKECCYNPSKWLDEEYRKYFKLKNPPQPPILT 360

Query: 361  LNEGLVYVHRVQVTPCRVYFCGPEVNVSNRVLRRYPEYLDNFLRVSFVDEELDKLYSTEL 420
            LNEGLVYVHRVQVTPC+VYFCGPEVN+SNRVLRRYP+Y+DNFLRVSFVDEEL K+YSTEL
Sbjct: 361  LNEGLVYVHRVQVTPCKVYFCGPEVNISNRVLRRYPDYIDNFLRVSFVDEELGKMYSTEL 420

Query: 421  SPRESSSLEDGKTKIFKRILSVLRDGITIGDKKFEFLAYSSSQLRENSAWMFAPKDGITA 480
            SPR SSSLEDGKTKI KRILSVLRDGITIGDKKFEFLAYSSSQLREN+AWMFAPK+ +TA
Sbjct: 421  SPRASSSLEDGKTKILKRILSVLRDGITIGDKKFEFLAYSSSQLRENAAWMFAPKNELTA 480

Query: 481  AGIRKWMGDFRSIRNVAKYAARLGQSFGSSTETLSVGRREVEVIPDIEVES-DGVKYVFS 540
            A IR+WMGDF +IRNVAKYAARLGQ FGSSTETLSV RREV+VIPDIEVES  GV YVFS
Sbjct: 481  AKIRQWMGDFHNIRNVAKYAARLGQPFGSSTETLSVSRREVKVIPDIEVESGSGVNYVFS 540

Query: 541  DGIGKISASFARKVAQKCGIRHTPSAFQIRYAGFKGVISVDPTSSVKLSLRNSMLKYEST 600
            DGIGKI+ASFARKVA+KCGIRHTPSAFQIRYAGFKGVISVDPTSSVKLSLRNSMLKYEST
Sbjct: 541  DGIGKIAASFARKVAKKCGIRHTPSAFQIRYAGFKGVISVDPTSSVKLSLRNSMLKYEST 600

Query: 601  DTKLDVLLWSKSLPCYLNRQLITLLSTLGVEDHVFEKKQKELMDQLDTIFTDSMKAQQAL 660
            DTKLDVL WSK  PC+LNRQLITLLSTLGV+DHVFE KQ+EL+D+LDTIF+D +KAQQAL
Sbjct: 601  DTKLDVLSWSKYHPCFLNRQLITLLSTLGVQDHVFESKQQELIDELDTIFSDPLKAQQAL 660

Query: 661  ELMSPGEITNVLKEMISCGYRPDSEPFLSMMLLTFRQSKLLELRRKSRIFIPNGRAMMGC 720
            ELMSPGE T +LKEM+ CGY+PDSEPFL MML TFR+SKL+ELR KSRIFIPNGRAMMGC
Sbjct: 661  ELMSPGENTKILKEMMLCGYKPDSEPFLRMMLHTFRESKLMELRMKSRIFIPNGRAMMGC 720

Query: 721  LDETGNLEYGEVFVQCTAHQQLQDDHIIFKRGKSNRHFIATGTVAVAKNPCLHPGDVRVL 780
            LDET NLEYGEVF QC+AHQQL DD +IFKR KSNRHFI TGTV VAKNPCLHPGDVRVL
Sbjct: 721  LDETRNLEYGEVFWQCSAHQQLHDDRVIFKRIKSNRHFIVTGTVVVAKNPCLHPGDVRVL 780

Query: 781  TAVDVPSLHHMVDCVVFPQKGPRPHPNECSGSDLDGDIYFVCWDPDLIPPQQVEPMDYTP 840
            TAVDVPSLHHM+DCVVFPQKG RPHPNECSGSDLDGDIYFVCWDPDLIPPQQVEPMDYTP
Sbjct: 781  TAVDVPSLHHMIDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDPDLIPPQQVEPMDYTP 840

Query: 841  VPSKLLDHDVTMEEVQEYFANYMVNDSLGIIANAHTAFADREPKKAMSKPCIELAKLFSI 900
            VPS++LDHDVTMEEVQEYFANYMVNDSLGIIANAHTAFAD+EPKKAMS PCI+LAKLFSI
Sbjct: 841  VPSQVLDHDVTMEEVQEYFANYMVNDSLGIIANAHTAFADKEPKKAMSNPCIQLAKLFSI 900

Query: 901  AVDFPKTGVPALIPANLRVEEYPDFMDKADKVTYQSENVLGKLFRMLDEIEPKI-DIRSF 960
            AVDFPKTGVPALIPANLRV+EYPDFMDKADKVTY+SENVLGKLFRMLD I P I +IRSF
Sbjct: 901  AVDFPKTGVPALIPANLRVKEYPDFMDKADKVTYESENVLGKLFRMLDSIGPNIKNIRSF 960

Query: 961  --TRDVARQAYDPDMEVEGFEEYLDDAIYHKGNYDMRLGNLMNYYRIKNEAELISGGSLS 1020
              T ++ARQ YDPDMEVEGFEEYLDDAIYHK NYDMRLGNLM+Y++IK EAELISGGSL+
Sbjct: 961  NYTPEMARQDYDPDMEVEGFEEYLDDAIYHKNNYDMRLGNLMHYHKIKTEAELISGGSLT 1020

Query: 1021 RSLSATKKNEAESIATAVRSLRKEARSWFNENAELHFRHGNNVYARASAWYFVTYHHSYW 1080
             SLS T KNEAESI  AV+SLRKEAR WFNE A+LH+ H  NVYARASAWYFVTYHH+YW
Sbjct: 1021 SSLSFTMKNEAESIILAVKSLRKEARGWFNEKADLHYGHHTNVYARASAWYFVTYHHTYW 1080

Query: 1081 GWFDEGKDHGHLISFPWCVYDKLVRIKKQKISAR 1110
            GW D  K+HGH +SFPWCVYDKL+RIK +KI+ R
Sbjct: 1081 GWSDGRKNHGHFLSFPWCVYDKLIRIKHRKINCR 1112

BLAST of MC09g1024 vs. TAIR 10
Match: AT1G14790.1 (RNA-dependent RNA polymerase 1 )

HSP 1 Score: 1365.1 bits (3532), Expect = 0.0e+00
Identity = 685/1113 (61.55%), Postives = 834/1113 (74.93%), Query Frame = 0

Query: 1    MGKTIQLYGFPTGVVQEEVKEFVERITGSGTIDAIKTKRSNGRGKRVCATIQFTNDEGAK 60
            MGKTIQ++GFP GV  EEVK+F+ER+TGSGT+ AIK ++    G RV A +QFT++   +
Sbjct: 1    MGKTIQVFGFPNGVSAEEVKKFLERLTGSGTVYAIKVRQPKKGGPRVYAIVQFTSERHTR 60

Query: 61   LIIFLANGRLYYGSSYLKAKEWKQDILPNPLVFEYNFKGLRLHLGCQISKESFFVLQTEL 120
            LII  A  RLYYG SYLKA E +QDI+P P    +   GL++  GCQ+S + F  L +  
Sbjct: 61   LIITAAAERLYYGRSYLKAFEVEQDIVPKPRASLHTISGLKMFFGCQVSTKKFLTLWSAQ 120

Query: 121  NVSVDFGFDRRVLSFFISHSHVDYMLVLRYENVWQVQLHKPQGQSDVDYLLIQLFGAPRI 180
            +V V FG   R L F  S    DY L L YEN+WQ+ LH PQG+S   +L+IQ+ GAP+I
Sbjct: 121  DVCVSFGIGMRKLHFSFSWYQKDYRLELSYENIWQIDLHSPQGRSS-KFLVIQVIGAPKI 180

Query: 181  YERNSESFGPILDDPFINFSKEIDTKWFRATDFTPSCCIGQSSGLCLEIPYGRQLPNLHD 240
            +E+  +    +L      +S   D +W R TDFT S CIGQS+  CLE+P    +P+  +
Sbjct: 181  FEKEDQPIN-LLFGIMDFYSDGSDEQWIRTTDFTSSSCIGQSTAFCLELPVHLNVPDFRE 240

Query: 241  KFAHYFKEIKGKFTLDRGSTYSSNPN-LVPIVRPPRNISLPYAILFKINLLVQNGCLPGP 300
             FA+Y +     F ++ GS+YSSN N LVP+V PP   SLP+ ILFK+N LVQN CL GP
Sbjct: 241  NFANYAEHRASSFLIESGSSYSSNANTLVPVVDPPPGFSLPFEILFKLNTLVQNACLSGP 300

Query: 301  ALDISFYQMVDPQRNNIGFIDHALNKLYHLKECCYNPSKWLDDEYRKYFKARNPPQPPIM 360
            ALD+ FY++++ ++ +   IDH L KL+HL ECCY P+ WL DEY+K+      P  P +
Sbjct: 301  ALDLDFYRLLNQKKYDRALIDHCLEKLFHLGECCYEPAHWLRDEYKKWISKGKLPLSPTI 360

Query: 361  SLNEGLVYVHRVQVTPCRVYFCGPEVNVSNRVLRRYPEYLDNFLRVSFVDEELDKLYSTE 420
            SL++GLVY++RVQVTP RVYF GPEVNVSNRVLR Y +Y++NFLRVSFVDE+L+K+ S +
Sbjct: 361  SLDDGLVYMYRVQVTPARVYFSGPEVNVSNRVLRHYSKYINNFLRVSFVDEDLEKVRSMD 420

Query: 421  LSPRESSSLEDGKTKIFKRILSVLRDGITIGDKKFEFLAYSSSQLRENSAWMFAPKDGIT 480
            LSPR S+     +TK++ RI SVLRDGI IGDKKFEFLA+SSSQLRENSAWMFAP D IT
Sbjct: 421  LSPRSST---QRRTKLYDRIYSVLRDGIVIGDKKFEFLAFSSSQLRENSAWMFAPIDRIT 480

Query: 481  AAGIRKWMGDFRSIRNVAKYAARLGQSFGSSTETLSVGRREVEVIPDIEVESDGVKYVFS 540
            AA IR WMGDF  IRNVAKYAARLGQSF SS ETL+V   E+EVIPD+E+ S G +YVFS
Sbjct: 481  AAHIRAWMGDFDHIRNVAKYAARLGQSFSSSRETLNVRSDEIEVIPDVEIISLGTRYVFS 540

Query: 541  DGIGKISASFARKVAQKCGI-RHTPSAFQIRYAGFKGVISVDPTSSVKLSLRNSMLKYES 600
            DGIGKISA FARKVA+KCG+   +PSAFQIRY G+KGV++VDP SS KLSLR SM K+ES
Sbjct: 541  DGIGKISAEFARKVARKCGLTEFSPSAFQIRYGGYKGVVAVDPNSSKKLSLRKSMSKFES 600

Query: 601  TDTKLDVLLWSKSLPCYLNRQLITLLSTLGVEDHVFEKKQKELMDQLDTIFTDSMKAQQA 660
             +TKLDVL WSK  PCY+NRQLITLLSTLGV D VFEKKQ+E++D+LD I T  ++A +A
Sbjct: 601  ENTKLDVLAWSKYQPCYMNRQLITLLSTLGVTDSVFEKKQREVVDRLDAILTHPLEAHEA 660

Query: 661  LELMSPGEITNVLKEMISCGYRPDSEPFLSMMLLTFRQSKLLELRRKSRIFIPNGRAMMG 720
            L LM+PGE TN+LK +I CGY+PD+EPFLSMML  FR SKLLELR K+RIFI  GR+MMG
Sbjct: 661  LGLMAPGENTNILKALILCGYKPDAEPFLSMMLQNFRASKLLELRTKTRIFISGGRSMMG 720

Query: 721  CLDETGNLEYGEVFVQCTAHQQLQDDHIIFKRGKSNRHFIATGTVAVAKNPCLHPGDVRV 780
            CLDET  LEYG+V VQ +               +  R FI TG V VAKNPCLHPGDVRV
Sbjct: 721  CLDETRTLEYGQVVVQYSDPM------------RPGRRFIITGPVVVAKNPCLHPGDVRV 780

Query: 781  LTAVDVPSLHHMVDCVVFPQKGPRPHPNECSGSDLDGDIYFVCWDPDLIPPQQVEPMDYT 840
            L AV+VP+L+HMVDCVVFPQKG RPHPNECSGSDLDGDIYFVCWD +L+PP+  EPMDYT
Sbjct: 781  LQAVNVPALNHMVDCVVFPQKGLRPHPNECSGSDLDGDIYFVCWDQELVPPRTSEPMDYT 840

Query: 841  PVPSKLLDHDVTMEEVQEYFANYMVNDSLGIIANAHTAFADREPKKAMSKPCIELAKLFS 900
            P P+++LDHDVT+EEV+EYFANY+VNDSLGIIANAHTAFAD+EP KA S PCIELAK FS
Sbjct: 841  PEPTQILDHDVTIEEVEEYFANYIVNDSLGIIANAHTAFADKEPLKAFSDPCIELAKKFS 900

Query: 901  IAVDFPKTGVPALIPANLRVEEYPDFMDKADKVTYQSENVLGKLFRMLDE-IEPKIDIRS 960
             AVDFPKTGV A+IP +L V+EYPDFM+K DK TY+S+NV+GKLFR + E   P I I+S
Sbjct: 901  TAVDFPKTGVAAVIPQHLYVKEYPDFMEKPDKPTYESKNVIGKLFREVKERAPPLISIKS 960

Query: 961  FTRDVARQAYDPDMEVEGFEEYLDDAIYHKGNYDMRLGNLMNYYRIKNEAELISGGSLSR 1020
            FT DVA ++YD DMEV+GFEEY+D+A Y K NYD +LGNLM+YY IK EAE++SGG +  
Sbjct: 961  FTLDVASKSYDKDMEVDGFEEYVDEAFYQKANYDFKLGNLMDYYGIKTEAEILSGGIMRM 1020

Query: 1021 SLSATKKNEAESIATAVRSLRKEARSWFNENAELHFRHGNNVYARASAWYFVTYHHSYWG 1080
            S S TK+ +AESI  AVR+LRKE  S FN + E       N  A+ASAWY VTYH SYWG
Sbjct: 1021 SKSFTKRRDAESIGRAVRALRKETLSLFNASEE-----EENESAKASAWYHVTYHSSYWG 1080

Query: 1081 WFDEGKDHGHLISFPWCVYDKLVRIKKQKISAR 1111
             ++EG +  H +SF WCVYDKLVRIKK  +  R
Sbjct: 1081 LYNEGLNRDHFLSFAWCVYDKLVRIKKTNLGRR 1091

BLAST of MC09g1024 vs. TAIR 10
Match: AT4G11130.1 (RNA-dependent RNA polymerase 2 )

HSP 1 Score: 746.9 bits (1927), Expect = 2.4e-215
Identity = 432/1132 (38.16%), Postives = 654/1132 (57.77%), Query Frame = 0

Query: 4    TIQLYGFPTGVVQEEVKEFVERITGSGTIDA--IKTKRSNGRGKRVCATIQFTNDE-GAK 63
            T+++   P  +V +E+  F+E   G  T+ A  I T R N +  R  A +QFT  E  ++
Sbjct: 11   TVKISNVPQTIVADELLRFLELHLGEDTVFALEIPTTRDNWK-PRDFARVQFTTLEVKSR 70

Query: 64   LIIFLANGRLYYGSSYLKAKEWKQDILPNPLVFEYNFKGLRLHLGCQISKES-FFVLQTE 123
              +  +  +L + +  L+  E   DI+P P+        + L +G   S E  F  L+  
Sbjct: 71   AQLLSSQSKLLFKTHNLRLSEAYDDIIPRPVDPRKRLDDIVLTVGFPESDEKRFCALEKW 130

Query: 124  LNVSVDFGFDRRVLSFFISHSHVDYMLVLRYENVWQVQLHKPQGQ-SDVDYLLIQLFGAP 183
              V      ++R + F++  S   Y + +R+E++ +       G  S++D  L++L   P
Sbjct: 131  DGVRCWILTEKRRVEFWVWESGDCYKIEVRFEDIIETLSCCVNGDASEIDAFLLKLKYGP 190

Query: 184  RIYERNSESFGPILDDPFINFSKE-IDTKWFRATDFTPSCCIGQSSGLCLEIPYGRQLPN 243
            ++++R +             F KE  D  W R TDF+ S  IG S+  CLE+  G  + +
Sbjct: 191  KVFKRVTVHIATKFKSDRYRFCKEDFDFMWIRTTDFSGSKSIGTSTCFCLEVHNGSTMLD 250

Query: 244  LHDKFAHYFKEIKGKFTLDRGSTYSSNPNLVPIVRPP-RNISLPYAILFKINLLVQNGCL 303
            +      Y++E     T   G T++S   +VP++      +  PY ILF++N LV    +
Sbjct: 251  IFSGLP-YYREDTLSLTYVDGKTFASAAQIVPLLNAAILGLEFPYEILFQLNALVHAQKI 310

Query: 304  P-GPALDISFYQMVDPQRNNIGFIDHALNKLYHLKECCYNPSKWLDDEYRKYF-KARNPP 363
                A D+   +++         +   L KL+     CY+P  ++  + +    K ++ P
Sbjct: 311  SLFAASDMELIKILRGMSLETALV--ILKKLHQQSSICYDPVFFVKTQMQSVVKKMKHSP 370

Query: 364  QPPIMSLNE-GLVYVHRVQVTPCRVYFCGPEVNVSNRVLRRYPEYLDNFLRVSFVDEELD 423
                  L E  ++   R  VTP ++Y  GPE+  +N V++ + E++ +F+RV+FV+E+  
Sbjct: 371  ASAYKRLTEQNIMSCQRAYVTPSKIYLLGPELETANYVVKNFAEHVSDFMRVTFVEEDWS 430

Query: 424  KLYSTELS--PRESSSLEDGKTKIFKRILSVLRDGITIGDKKFEFLAYSSSQLRENSAWM 483
            KL +  LS   +E   ++  +T I+ R+LS+L +GIT+G K+FEFLA+S+SQLR NS WM
Sbjct: 431  KLPANALSVNSKEGYFVKPSRTNIYNRVLSILGEGITVGPKRFEFLAFSASQLRGNSVWM 490

Query: 484  FAPKDGITAAGIRKWMGDFRSIRNVAKYAARLGQSFGSSTETLSVGRREVEVIPDIEVES 543
            FA  + + A  IR+WMG FR IR+++K AAR+GQ F +S +TL V  ++VE IPDIEV +
Sbjct: 491  FASNEKVKAEDIREWMGCFRKIRSISKCAARMGQLFSASRQTLIVRAQDVEQIPDIEVTT 550

Query: 544  DGVKYVFSDGIGKISASFARKVAQKCGIRHTPSAFQIRYAGFKGVISVDPTSSVKLSLRN 603
            DG  Y FSDGIGKIS +FA++VAQKCG+ H PSAFQIRY G+KGVI+VD +S  KLSLR+
Sbjct: 551  DGADYCFSDGIGKISLAFAKQVAQKCGLSHVPSAFQIRYGGYKGVIAVDRSSFRKLSLRD 610

Query: 604  SMLKYESTDTKLDVLLWSKSLPCYLNRQLITLLSTLGVEDHVFEKKQKELMDQLDTIFTD 663
            SMLK++S +  L+V  W++S+PC+LNR++I LLSTLG+ED +FE  Q   +  L  +  D
Sbjct: 611  SMLKFDSNNRMLNVTRWTESMPCFLNREIICLLSTLGIEDAMFEAMQAVHLSMLGNMLED 670

Query: 664  SMKAQQALELMSPGEITNVLKEMISCGYRPDSEPFLSMMLLTFRQSKLLELRRKSRIFIP 723
               A   L+ +S     N+L +M+  GY P SEP+LSMML    +S+L EL+ + RI +P
Sbjct: 671  RDAALNVLQKLSGENSKNLLVKMLLQGYAPSSEPYLSMMLRVHHESQLSELKSRCRILVP 730

Query: 724  NGRAMMGCLDETGNLEYGEVFVQCT-AHQQLQDDHIIFKRGKSNRHFIATGTVAVAKNPC 783
             GR ++GC+DE G LEYG+V+V+ T    +L+     + R       +  G V V KNPC
Sbjct: 731  KGRILIGCMDEMGILEYGQVYVRVTLTKAELKSRDQSYFRKIDEETSVVIGKVVVTKNPC 790

Query: 784  LHPGDVRVLTAVDVPSLHH--MVDCVVFPQKGPRPHPNECSGSDLDGDIYFVCWDPDLIP 843
            LHPGD+RVL A+          +DC++FPQKG RPHPNECSG DLDGD +FV WD  +IP
Sbjct: 791  LHPGDIRVLDAIYEVHFEEKGYLDCIIFPQKGERPHPNECSGGDLDGDQFFVSWDEKIIP 850

Query: 844  PQQVEPMDYTPVPSKLLDHDVTMEEVQEYFANYMVNDSLGIIANAHTAFADREPKKAMSK 903
             +   PMDY     +L+DHDVT+EE+ ++F +YM++D+LG+I+ AH   ADR+P+KA S+
Sbjct: 851  SEMDPPMDYAGSRPRLMDHDVTLEEIHKFFVDYMISDTLGVISTAHLVHADRDPEKARSQ 910

Query: 904  PCIELAKLFSIAVDFPKTGVPALIPANLRVEEYPDFMDKADKVTYQSENVLGKLFRMLDE 963
             C+ELA L S AVDF KTG PA +P  L+  E+PDF+++ +K TY SE+V GKL+R +  
Sbjct: 911  KCLELANLHSRAVDFAKTGAPAEMPYALKPREFPDFLERFEKPTYISESVFGKLYRAVKS 970

Query: 964  IEPKIDIRSFTRDVARQAYDPDMEVEGFEEYLDDAIYHKGNYDMRLGNLMNYYRIKNEAE 1023
               +    + + D    AYD  +E  GFE +++ A  H+  Y  +L +LM YY   NE E
Sbjct: 971  SLAQRKPEAESEDTV--AYDVTLEEAGFESFIETAKAHRDMYGEKLTSLMIYYGAANEEE 1030

Query: 1024 LISGGSLSRSLSATKKNE-----AESIATAVRSLRKEARSWFNENAELHFRHGNNVYARA 1083
            +++G   ++ +   + N       + I  +V+ L KEA  WF ++ E            A
Sbjct: 1031 ILTGILKTKEMYLARDNRRYGDMKDRITLSVKDLHKEAMGWFEKSCE----DEQQKKKLA 1090

Query: 1084 SAWYFVTYHHSYWGWFDEGKDHGHLISFPWCVYDKLVRIKKQKISARNARRR 1116
            SAWY+VTY+ ++        +    +SFPW V D L+ IK     A NA+R+
Sbjct: 1091 SAWYYVTYNPNH------RDEKLTFLSFPWIVGDVLLDIK-----AENAQRQ 1121

BLAST of MC09g1024 vs. TAIR 10
Match: AT3G49500.1 (RNA-dependent RNA polymerase 6 )

HSP 1 Score: 570.1 bits (1468), Expect = 3.9e-162
Identity = 386/1069 (36.11%), Postives = 565/1069 (52.85%), Query Frame = 0

Query: 95   YNFKGLRLHLGCQISKESFFV---------LQTELNVSVDFGFDRRVLSFF---ISHS-- 154
            Y   G+ L +G  +S++ FFV         L    + +  F F +     F   + H+  
Sbjct: 130  YKLAGITLEIGTLVSRDDFFVSWRAEGVDFLVDPFDNTCKFCFRKSTAFSFKDAVMHAVI 189

Query: 155  HVDYMLVLRYENVWQVQLHKPQGQSDVDYLLIQLFGAPRIYERNSESF------GPILDD 214
            + DY L L   ++  V+ +K         L++QL  +PR++ R ++        G +LDD
Sbjct: 190  NCDYKLELLVRDIQTVRQYKTLHGF---VLILQLASSPRVWYRTADDDIYDTVPGDLLDD 249

Query: 215  PFINFSKEIDTKWFRATDFTPSCCIGQ--SSGLCLEIPYGRQLPNLHDKF-AHYFKEIKG 274
                     D  W R TDFT    IG+  S  + +   Y  +L    D F     +E + 
Sbjct: 250  ---------DDPWIRTTDFTQVGAIGRCHSYRVLISPRYENKLRTALDYFRMRRVQEERV 309

Query: 275  KF-TLDRGSTYSSNPNLVPIVRPPRNISLPYAILFKINLLVQNGCLPGPALDISFYQMVD 334
            ++    R       P             + + I+F +N ++  G      L   F+ ++ 
Sbjct: 310  RWPPRIRNEPCFGEPVSDHFFCIHHKEGISFEIMFLVNSVLHRGVFNQFQLTERFFDLLR 369

Query: 335  PQRNNIGFIDHALNKLYHLKECCYNPSKWLDDEYRKY-----FKARNPPQPPIMSLNEGL 394
             Q  ++      +  L HL  C Y   + + D Y++      +  +NP        +E +
Sbjct: 370  NQPKDVN-----IASLKHL--CTY--KRPVFDAYKRLKLVQEWIQKNPKLLGSHEQSEDI 429

Query: 395  VYVHRVQVTPCRVYFCGPEVNVSNRVLRRYPEYLDNFLRVSFVDEELDKLYSTELS---- 454
              + R+ +TP R Y   PEV +SNRVLRRY    + FLRV+F+DE +  + S  LS    
Sbjct: 430  SEIRRLVITPTRAYCLPPEVELSNRVLRRYKAVAERFLRVTFMDESMQTINSNVLSYFVA 489

Query: 455  ---PRESSSLEDGKTKIFKRILSVLRDGITIGDKKFEFLAYSSSQLRENSAWMFAPKDGI 514
                  +SS    KT +FKR+ S+L DG  +  +K+ FLA+S++QLR+ SAW FA     
Sbjct: 490  PIVKDLTSSSFSQKTYVFKRVKSILTDGFKLCGRKYSFLAFSANQLRDRSAWFFAEDGKT 549

Query: 515  TAAGIRKWMGDFRSIRNVAKYAARLGQSFGSSTETLSVGRREVEV-IPDIEVESDGVKYV 574
              + I+ WMG F+  +NVAK AAR+G  F S+  T+ V   EV+  +PDIE       YV
Sbjct: 550  RVSDIKTWMGKFKD-KNVAKCAARMGLCFSSTYATVDVMPHEVDTEVPDIERNG----YV 609

Query: 575  FSDGIGKISASFARKVAQ--KCGIRHTPSAFQIRYAGFKGVISVDPTSS--VKLSLRNSM 634
            FSDGIG I+   A +V +  K  + ++P A+QIRYAGFKGV++  P+ S  ++L+LR+SM
Sbjct: 610  FSDGIGTITPDLADEVMEKLKLDVHYSPCAYQIRYAGFKGVVARWPSKSDGIRLALRDSM 669

Query: 635  LKYESTDTKLDVLLWSKSLPCYLNRQLITLLSTLGVEDHVFEKKQKELMDQLDTIFTDSM 694
             K+ S  T L++  W++  P +LNRQ+ITLLS LGV D +F   Q+ ++ +L+ I  D+ 
Sbjct: 670  KKFFSKHTILEICSWTRFQPGFLNRQIITLLSVLGVPDEIFWDMQESMLYKLNRILDDTD 729

Query: 695  KAQQALELMSPGEITNVLKEMISCGYRPDSEPFLSMMLLTFRQSKLLELRRKSRIFIPNG 754
             A + L   S  E  N    M+S G++P +EP L  ML + R ++L  LR KSRIF+ +G
Sbjct: 730  VAFEVL-TASCAEQGNTAAIMLSAGFKPKTEPHLRGMLSSVRIAQLWGLREKSRIFVTSG 789

Query: 755  RAMMGCLDETGNLEYGEVFVQC---TAHQQLQDDHIIFKRGKSNRHFIATGTVAVAKNPC 814
            R +MGCLDE G LE+G+ F+Q    +           FK  K++   +  G VA+AKNPC
Sbjct: 790  RWLMGCLDEAGILEHGQCFIQVSKPSIENCFSKHGSRFKETKTDLE-VVKGYVAIAKNPC 849

Query: 815  LHPGDVRVLTAVDVPSLHHMVDCVVFPQKGPRPHPNECSGSDLDGDIYFVCWDPDLIPP- 874
            LHPGDVR+L AVDVP LHHM DC++FPQKG RPH NE SGSDLDGD+YFV WD  LIPP 
Sbjct: 850  LHPGDVRILEAVDVPQLHHMYDCLIFPQKGDRPHTNEASGSDLDGDLYFVAWDQKLIPPN 909

Query: 875  -QQVEPMDYTPVPSKLLDHDVTMEEVQEYFANYMVNDSLGIIANAHTAFADREPKKAMSK 934
             +    M Y     K L   V  +++ ++FA  + N+ LG I NAH   ADR    AM +
Sbjct: 910  RKSYPAMHYDAAEEKSLGRAVNHQDIIDFFARNLANEQLGTICNAHVVHADRSEYGAMDE 969

Query: 935  PCIELAKLFSIAVDFPKTGVPALIPANLRVEEYPDFMDKADKVTYQSENVLGKLFRMLDE 994
             C+ LA+L + AVDFPKTG    +P +L+ + YPDFM K D  TY+S  +LG+L+R + E
Sbjct: 970  ECLLLAELAATAVDFPKTGKIVSMPFHLKPKLYPDFMGKEDYQTYKSNKILGRLYRRVKE 1029

Query: 995  I--EPKIDIRSFTRDVARQAYDPDMEVEGFEEYLDDAIYHKGNYDMRLGNLMNYYRIKNE 1054
            +  E        + D +   YD  +E+ GFE+ + +A  HK  YD +L  L+  Y+++ E
Sbjct: 1030 VYDEDAEASSEESTDPSAIPYDAVLEIPGFEDLIPEAWGHKCLYDGQLIGLLGQYKVQKE 1089

Query: 1055 AELISGGSLSRSLSATKKNE--AESIATAVRSLRKEARSWFNE----NAELHFRHGNNVY 1104
             E+++G   S     +KK     E +  +  SL+KE R  F E    +  L     N +Y
Sbjct: 1090 EEIVTGHIWSMPKYTSKKQGELKERLKHSYNSLKKEFRKVFEETIPDHENLSEEEKNILY 1149

BLAST of MC09g1024 vs. TAIR 10
Match: AT2G19910.1 (RNA-dependent RNA polymerase family protein )

HSP 1 Score: 117.5 bits (293), Expect = 7.0e-26
Identity = 121/422 (28.67%), Postives = 188/422 (44.55%), Query Frame = 0

Query: 566 FQIRYAGF--KGVISVDPTSSVK-LSLRNSMLK-YE-------STDTKLDVLLWSK-SLP 625
           F+I Y G+  KG    +     + + +R SM+K YE       ST   L+V+  S     
Sbjct: 455 FRIFYNGYAVKGTFLTNKKLPPRTVQVRPSMIKVYEDRTLSNLSTFNSLEVVTTSNPPRK 514

Query: 626 CYLNRQLITLLSTLGVEDHVFEKKQKELMDQLDTIFTDSMKAQQALELMSPGEITNVLKE 685
             L+R L+ LLS  GV +  F    +  +++  TIF     A +A       + T    +
Sbjct: 515 ARLSRNLVALLSYGGVPNDFFLNILRNTLEESKTIFYSERAAFKAAINYGDDQYT---AD 574

Query: 686 MISCGYRPDSEPFLSMMLLTFRQSKLLELRRKS----RIFIPNGRAMMGCLDETGNLEYG 745
           MI  G  P  EP+L       R S LL+  R +    R  I     +MG +D TG L+  
Sbjct: 575 MILVGI-PLDEPYLK-----DRLSYLLKTERNALKAGRFPIDESYYIMGTVDPTGELKEN 634

Query: 746 EVFVQCTAHQQLQDDHIIFKRGKSNRHFIATGTVAVAKNPCLHPGDVRVLTAVDVPSLHH 805
           E+ V             I   G+       +G V V +NP LH GD+ VL A  V +L  
Sbjct: 635 EICV-------------ILHSGQ------ISGDVLVYRNPGLHFGDIHVLKATYVKALED 694

Query: 806 MVD----CVVFPQKGPRPHPNECSGSDLDGDIYFVCWDPDLIPP-QQVEPMDYTPVPSKL 865
            V      V FPQKGPR   +E +G D DGD+YF+  +P L+   +  EP   +  PSK+
Sbjct: 695 YVGNAKFAVFFPQKGPRSLGDEIAGGDFDGDMYFISRNPKLLEHFKPSEPWVSSSKPSKI 754

Query: 866 --------LDHDVTMEEVQEYF--ANYMVNDSLGIIANAHTAFAD---------REPKKA 925
                   L  +   EE+ + F  A +   D +G+ A+      D          + K  
Sbjct: 755 YCGRKPSELSEEELEEELFKMFLKARFCKRDVIGMAADCWLGIMDPFLTLGDESAKEKYE 814

Query: 926 MSKPCIELAKLFSIAVDFPKTGVPALIPANLRVEEYPDFMDKADKVTYQSENVLGKLFRM 948
             K  ++L  ++  A+D PK G    +P +L ++ +P +M++  K  ++S ++LG +F  
Sbjct: 815 RKKNILKLIDIYYDALDAPKKGAKVDLPPDLEIKNFPHYMERDPKRDFRSTSILGLIFDT 848

BLAST of MC09g1024 vs. TAIR 10
Match: AT2G19920.1 (RNA-dependent RNA polymerase family protein )

HSP 1 Score: 116.7 bits (291), Expect = 1.2e-25
Identity = 144/522 (27.59%), Postives = 224/522 (42.91%), Query Frame = 0

Query: 497 AKYAARLGQSFGSSTETLSVGRREVEV--IPDIE---------VESDGVKYVFSDGIGKI 556
           A Y AR      S T+ L V   E+ V  I DI          ++ +G   + SDG G I
Sbjct: 351 ANYMARFSLIL-SKTKKLEVDMTEITVMQIDDIHCHDQSNNDVLDKNGKPRIHSDGTGYI 410

Query: 557 SASFARKV--------------AQKCGIRHTPSAFQIRY----AGFKGVISVD---PTSS 616
           S   AR                 Q   ++  P   QIR     +  KG+  ++   P  +
Sbjct: 411 SEDLARMCPLNIFKGKSMRSNNIQGTCVQEPPLLIQIRMFNDGSAVKGIFLLNKNLPPQT 470

Query: 617 VKLSLRNSMLK-YE-------STDTKLDVLLWSK-SLPCYLNRQLITLLSTLGVEDHVFE 676
           V+  +R SM+K Y+       ST   L+V+  S       L++ L+ LLS  GV +  F 
Sbjct: 471 VQ--VRPSMIKVYKDKNLSNFSTFNSLEVVTTSNPPKRAKLSKNLVALLSYGGVPNDFFL 530

Query: 677 KKQKELMDQLDTIFTDSMKAQQALELMSPGEITNVLKEMISCGYRPDSEPFLSMMLLTFR 736
                 +++  TIF     A +A       +  N L +MI  G  P  EP+L   L    
Sbjct: 531 DILLNTLEKKKTIFFKVRAAGKAALHYGNMDDKNAL-QMIMAGI-PLDEPYLKHYL---- 590

Query: 737 QSKLLELR----RKSRIFIPNGRAMMGCLDETGNLEYGEVFVQCTAHQQLQDDHIIFKRG 796
            SKLL+L     +  ++ I     +MG +D TG L+  EV    +   + QD        
Sbjct: 591 -SKLLKLEKDDLKAGKLPIDESYYLMGTVDPTGELKEDEV----SGLAKSQD-------- 650

Query: 797 KSNRHFIATGTVAVAKNPCLHPGDVRVLTAVDVPSLHHMVD----CVVFPQKGPRPHPNE 856
                      V V +NP LH GD+ +L A  V SL   V      V FPQKGPR   +E
Sbjct: 651 -----------VLVYRNPGLHFGDIHILKATYVKSLEQYVGNSKYGVFFPQKGPRSLGDE 710

Query: 857 CSGSDLDGDIYFVCWDPDLIPPQQVEPMD-----------YTPVPSKLLDHDVTMEEVQE 916
            +G D DGD+YF+  +P L+  +  +P +           YT      L  +   EE+ +
Sbjct: 711 IAGGDFDGDMYFISRNPKLL--EHYKPSEPWVSSSPRSKIYTGRQPSELSPEQLEEELFK 770

Query: 917 YF--ANYMVNDSLGIIANAHTAFADR---------EPKKAMSKPCIELAKLFSIAVDFPK 948
            F    +  +  +G  A++  A  DR         + K  M K  ++L  ++  A+D PK
Sbjct: 771 IFLKTGFSPSSVIGQAADSWLAIMDRFLTLGDENVKEKAEMKKKMLKLTDIYYDAIDAPK 830