Csor.00g129410 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSstart_codoninitialpolypeptideintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCTGACATATCGGCTAGCTTCATCGATATATTCCCGGAAGAGTTGGAGAACCCGTCGGAAAGTAGTTCATATGATTCCAGCAACGACGGAGATCAGAACGGAGAAACTTCTTCTATCGTTAAAGAAAACAGAGCCTTCTGGAAATCGCAGAAGGAAGTTCTTCAGGTAAAGGAATTTTTGTTACGTGATTTCATTGGTGTGATTTTGTTCTGATTCTTTCTTTTTTGTAGGCGAATTTGAAAAGGACCAATTCGATTGAGTTAAAAAATTTGGAAAGCAACGAAGACTGCTCTCAGAGAAATGAATTTAAAGTCCATTGATTGCGGTTGCCGGAGACCGGCGGAGGTTGCGGTCTGTCGGGAGTGTGTACAGAGAGAAATATGTAATTATCTGAGAAACGCCGGCTTCAATTGCGCCGTTTGTAAGTCCAAATGGAAAAGCTCGCCGGAAATTCCATCAGGTAAACAGAATACCCTAACCCTAGCGTTAGTTCTCATCGTCTTCAATTTTAGGGATTTGATAATTAGGGCTTTTTTACGCGCAGGGGAGCACAGTTATTTGGAAGTGGCGGACGATTGGAATCCGAATGAGAGAGTCATAATCGAGATGAATTTCAGAGAGGAATTCGAAATAGCCAGAGCAAGCGAAGAGTACAAGCGATTGGTCAGACGATTGCCGGAAGTATTCATTGGAAAAGCCGAGAAACTTCGAGAATCGATCAAAATTCTGTGCAATGCGGCGGAGAAGTGCATGAAGGAAAAAGAAGATGCACTTAGGGCCATGGAGGAAGTACAGATACATGCAGGCCAAATGGTTAGGGAAGTGCGAAAAGTCGACGCCGGCGCCGCTGCCGGTTGGATTATCCGACCGGCCGCCGAAGGCGAAGGCGTCCATGCTTACCTATGA ATGTCTGACATATCGGCTAGCTTCATCGATATATTCCCGGAAGAGTTGGAGAACCCGTCGGAAAGTAGTTCATATGATTCCAGCAACGACGGAGATCAGAACGGAGAAACTTCTTCTATCGTTAAAGAAAACAGAGCCTTCTGGAAATCGCAGAAGGAAGTTCTTCAGACTGCTCTCAGAGAAATGAATTTAAAGTCCATTGATTGCGGTTGCCGGAGACCGGCGGAGGTTGCGGTCTGTCGGGAGTGTGTACAGAGAGAAATATGTAATTATCTGAGAAACGCCGGCTTCAATTGCGCCGTTTGTAAGTCCAAATGGAAAAGCTCGCCGGAAATTCCATCAGGGGAGCACAGTTATTTGGAAGTGGCGGACGATTGGAATCCGAATGAGAGAGTCATAATCGAGATGAATTTCAGAGAGGAATTCGAAATAGCCAGAGCAAGCGAAGAGTACAAGCGATTGGTCAGACGATTGCCGGAAGTATTCATTGGAAAAGCCGAGAAACTTCGAGAATCGATCAAAATTCTGTGCAATGCGGCGGAGAAGTGCATGAAGGAAAAAGAAGATGCACTTAGGGCCATGGAGGAAGTACAGATACATGCAGGCCAAATGGTTAGGGAAGTGCGAAAAGTCGACGCCGGCGCCGCTGCCGGTTGGATTATCCGACCGGCCGCCGAAGGCGAAGGCGTCCATGCTTACCTATGA ATGTCTGACATATCGGCTAGCTTCATCGATATATTCCCGGAAGAGTTGGAGAACCCGTCGGAAAGTAGTTCATATGATTCCAGCAACGACGGAGATCAGAACGGAGAAACTTCTTCTATCGTTAAAGAAAACAGAGCCTTCTGGAAATCGCAGAAGGAAGTTCTTCAGACTGCTCTCAGAGAAATGAATTTAAAGTCCATTGATTGCGGTTGCCGGAGACCGGCGGAGGTTGCGGTCTGTCGGGAGTGTGTACAGAGAGAAATATGTAATTATCTGAGAAACGCCGGCTTCAATTGCGCCGTTTGTAAGTCCAAATGGAAAAGCTCGCCGGAAATTCCATCAGGGGAGCACAGTTATTTGGAAGTGGCGGACGATTGGAATCCGAATGAGAGAGTCATAATCGAGATGAATTTCAGAGAGGAATTCGAAATAGCCAGAGCAAGCGAAGAGTACAAGCGATTGGTCAGACGATTGCCGGAAGTATTCATTGGAAAAGCCGAGAAACTTCGAGAATCGATCAAAATTCTGTGCAATGCGGCGGAGAAGTGCATGAAGGAAAAAGAAGATGCACTTAGGGCCATGGAGGAAGTACAGATACATGCAGGCCAAATGGTTAGGGAAGTGCGAAAAGTCGACGCCGGCGCCGCTGCCGGTTGGATTATCCGACCGGCCGCCGAAGGCGAAGGCGTCCATGCTTACCTATGA MSDISASFIDIFPEELENPSESSSYDSSNDGDQNGETSSIVKENRAFWKSQKEVLQTALREMNLKSIDCGCRRPAEVAVCRECVQREICNYLRNAGFNCAVCKSKWKSSPEIPSGEHSYLEVADDWNPNERVIIEMNFREEFEIARASEEYKRLVRRLPEVFIGKAEKLRESIKILCNAAEKCMKEKEDALRAMEEVQIHAGQMVREVRKVDAGAAAGWIIRPAAEGEGVHAYL Homology
BLAST of Csor.00g129410 vs. NCBI nr
Match: KAG6570517.1 (hypothetical protein SDJN03_29432, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 458 bits (1178), Expect = 2.37e-162 Identity = 234/234 (100.00%), Postives = 234/234 (100.00%), Query Frame = 0
BLAST of Csor.00g129410 vs. NCBI nr
Match: KAG7010378.1 (hypothetical protein SDJN02_27171 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 352 bits (902), Expect = 8.24e-120 Identity = 186/205 (90.73%), Postives = 186/205 (90.73%), Query Frame = 0
BLAST of Csor.00g129410 vs. NCBI nr
Match: KAG6570520.1 (hypothetical protein SDJN03_29435, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 350 bits (899), Expect = 2.36e-119 Identity = 185/205 (90.24%), Postives = 186/205 (90.73%), Query Frame = 0
BLAST of Csor.00g129410 vs. NCBI nr
Match: XP_022944247.1 (uncharacterized protein LOC111448754 [Cucurbita moschata]) HSP 1 Score: 345 bits (886), Expect = 2.24e-117 Identity = 182/205 (88.78%), Postives = 184/205 (89.76%), Query Frame = 0
BLAST of Csor.00g129410 vs. NCBI nr
Match: XP_023513133.1 (uncharacterized protein LOC111777662 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 345 bits (884), Expect = 4.51e-117 Identity = 182/205 (88.78%), Postives = 183/205 (89.27%), Query Frame = 0
BLAST of Csor.00g129410 vs. ExPASy TrEMBL
Match: A0A6J1FV90 (uncharacterized protein LOC111448754 OS=Cucurbita moschata OX=3662 GN=LOC111448754 PE=4 SV=1) HSP 1 Score: 345 bits (886), Expect = 1.08e-117 Identity = 182/205 (88.78%), Postives = 184/205 (89.76%), Query Frame = 0
BLAST of Csor.00g129410 vs. ExPASy TrEMBL
Match: A0A6J1JF96 (uncharacterized protein LOC111483880 OS=Cucurbita maxima OX=3661 GN=LOC111483880 PE=4 SV=1) HSP 1 Score: 338 bits (867), Expect = 8.43e-115 Identity = 178/205 (86.83%), Postives = 183/205 (89.27%), Query Frame = 0
BLAST of Csor.00g129410 vs. ExPASy TrEMBL
Match: A0A0A0KD10 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G127460 PE=4 SV=1) HSP 1 Score: 295 bits (754), Expect = 1.51e-97 Identity = 156/205 (76.10%), Postives = 169/205 (82.44%), Query Frame = 0
BLAST of Csor.00g129410 vs. ExPASy TrEMBL
Match: A0A1S3BIT1 (uncharacterized protein LOC103490536 OS=Cucumis melo OX=3656 GN=LOC103490536 PE=4 SV=1) HSP 1 Score: 289 bits (739), Expect = 2.86e-95 Identity = 151/205 (73.66%), Postives = 168/205 (81.95%), Query Frame = 0
BLAST of Csor.00g129410 vs. ExPASy TrEMBL
Match: A0A5D3C3M0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold143G002020 PE=4 SV=1) HSP 1 Score: 289 bits (739), Expect = 6.33e-95 Identity = 151/205 (73.66%), Postives = 168/205 (81.95%), Query Frame = 0
BLAST of Csor.00g129410 vs. TAIR 10
Match: AT4G32480.1 (Protein of unknown function (DUF506) ) HSP 1 Score: 148.3 bits (373), Expect = 7.8e-36 Identity = 83/199 (41.71%), Postives = 123/199 (61.81%), Query Frame = 0
BLAST of Csor.00g129410 vs. TAIR 10
Match: AT2G20670.1 (Protein of unknown function (DUF506) ) HSP 1 Score: 143.3 bits (360), Expect = 2.5e-34 Identity = 80/209 (38.28%), Postives = 130/209 (62.20%), Query Frame = 0
BLAST of Csor.00g129410 vs. TAIR 10
Match: AT2G38820.2 (Protein of unknown function (DUF506) ) HSP 1 Score: 93.6 bits (231), Expect = 2.3e-19 Identity = 40/102 (39.22%), Postives = 76/102 (74.51%), Query Frame = 0
BLAST of Csor.00g129410 vs. TAIR 10
Match: AT2G38820.1 (Protein of unknown function (DUF506) ) HSP 1 Score: 88.2 bits (217), Expect = 9.6e-18 Identity = 37/96 (38.54%), Postives = 71/96 (73.96%), Query Frame = 0
BLAST of Csor.00g129410 vs. TAIR 10
Match: AT4G14620.1 (Protein of unknown function (DUF506) ) HSP 1 Score: 87.0 bits (214), Expect = 2.1e-17 Identity = 38/104 (36.54%), Postives = 75/104 (72.12%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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