Csor.00g230340 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g230340
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	Protein TIC 20
Location	Csor_Chr17: 3189804 .. 3201820 (-)
RNA-Seq Expression	Csor.00g230340
Synteny	Csor.00g230340

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACGCGTACCCAACACGACACTCCAATGTCTGATTCCGAGCGCAAGGAAGCTCCTAATTCTTCAAGCACTGACACAAAGAAGACGCCCAGAGGTTCCATCAGTGGCGGAGACGTCAAGGATACGCCGGAGTATGAGAAACAGAGGCTTTCTAGAATCGCCGAGAACAGGAAGAGAATGGAAGCCCTTGGATTGGCCAAATTGGCGACCTCATTTATGGATTCTTCCAAGACTCTGAGGAAGATTGATAGAAAGGGGAAGCGTAAGTTCGATGAAGATTATAATCCTGGCGAGGATTCTTCGAATTCTGAAGATGATGACTCGGAGGAAGGGGATGAAGGTTTTGGAAGTGGGAAAGTTTCTAGGTCTTGTGGAATGAAGGTAATCTCTCTCCATTTTCTGTTATTGTGTACTTTTACCATTGTACAAAAATTAATTTGTTGGTCGCTGCATTGTTCATGATTCAGCAATGTTCCTTAGGTTGATTCACTGTTAGTTTCCTGTTGGATCCTTAATTTTGGTTGTGTATATTATCTTAATTAAGTCGAATATTTAACAATTTGCCTGTTTCTATGTCTGTAATATCCATCAAAGATGGAGATAAATGCTGAGAGTATATATGTTTTTAGAAAGAAGACATTATTCATTGGTATGATGAAAAGATGAACTCAGTGTCACCTTTTATCTCAGTAATTAAGGCTTTGAATGGAGAGTTGGCTTCATTGTTTCATTTAAGTGAAGTGGAAAATGTAAGTCTTGGCCAAGGAGTTGAGGGAGCCTTTCTCCCTTCAGAATTGGGGAAGAACCTATTGATGCTAGAGTGAAAATGGTATCAGAAGCTTTGGAAAAGAATTAGAGCTTGAAGGAGTTTTTTAGTTGTTTTGTTTTTTCTTTGAAAGAAAAAAAGTCGAACAAATTTTGGTTCAATTTTAAATGAAAAGAATGAGAAATAGATCAAAGGAGCGGGAGGGGGGATTGAAGAAGTAGATAAGAGGGCTTTCTGGGTTTGTGGAGGATACACATCTAGGTTTTTGGGAGTCTTCCATTGGCCTTTGTATTCTTTCTTTTGAGGTTTTTGGTGGATTACCAAATCAAGTATGCCAAAAACATTGTTCAGACCCACCAGCATGATTGTAACAAAGAAGTCTGGTTTGGTCTCTGTATCTAGATCAAAGAGTTTCTTTCTTTGGTTGGAAGGGATTGATGGAGAAGTACTAGCTCTCGTTCCCTTCCTACGAAAGAAAGTCGTATATCAAGTAGAGAAATGATGACTAGCGCTTTTTGTTTTCTCAAGATGGAACCAAGATTCTGTTTGTACCTCATTTGCATCCAATTTGGTAATCTCGGCCTACGAATGCCTCTTGTTTGAAAGCTTTTCAACCCATAATAGCTTGCAATAGTCAACTAACCAGGACACGTTTCCCCAGTGGAGGGTTAAGGAAAAATCATATTATCTTGTCCATATTTGATAATCCATGCTTTACTTTCTTCGTAATTTTCATCACCTCAATGGAGTAAGATTTCCTGTCAACAGAGATCGTGTGTTTTGAGTAGTTTCCAACCCATTGGAAAGAGGAGGGATCAGAAAGTAAGGAGGGAGCTTGCATTTTTGTGCAGGAAATTTCCTCGGTTATAGCTTATATGCTATTGCCTTTTTCTTTTTCCTTTTGATAAGAAACCAGAGGATAACATTAATAGCAAAAAAGGAAAAAACAACCTAAGGGTTGTAGAAAGAGAACCCCCTCATGAAGAGCTAATCACAGGAACACCTTCCAGTCATGGAGAAATATGTCACTGTCAATTGTATGCTGTATTATAACTTGAGTTGCTGAAATGGGGAACAATTTGATCTGAACTTATATTCTATCAAGAAATTGTGGTGTGGGCTAGTCTTGATGATTATCCCTTTTGCTGAAGAGTTCTGGCTCATGTACAGTCAAGTTCTTGCAATTTGACTCCAGATTCCTCAGTCTCAGGTAATTGACAGAGAACTAGCTGGCTGTGTTAAAAATTCCTAAAACAGTCGGGAGTGTTCTTTTGGGATTCAAGTCTTAACAGCATCAGCATTATGAAATGAATATAGCACAAAGGAGGAATGTCTTGTTTCATGCACCTTTTTTTCTTCTTTATGTCAATTATAAGGCAGAATGTTGAGGATGTTAACCATTTATGTTTACAATCTGAGTGGGCCTGTAGTTGTTAAAATAATTTATTTGGCTCTTATATGTGAATCGGGCGTCTCCTATGGATATGGAGGCAACCTCTCAGGTATTTGGAGGCTTAAAGTTGGGAATGACAGGTCTTATTTTGTCACTTATTGAGTGTAAAGCTTTCCGTCGGTGGTTTTTTCCTGGTGTAAAACAGTAGGATTTCTAAAAATTCCTTCATACTAGACTGTTCCCTTAGGTAAAAACGTGTGTTACTCATAGATAGATTATGAAGTCGAAGGGGAATTATTTTTATACTTCTTGACTAAACCATGGGCTATAGCTTATCTCCTTCCATTTTTTGCATACTTTTTCTTTCATTTTATAGATGAAAGCCTTCTTCGTTTCCCCAAAAAAAAAAAAAACCTACTTGTCGTTGGAAAACCATGTATTGTTTCTAGCTTCATTTCCGAGAAAAACCTTTTTTTTTTTTAGTTAAATGGGGATATATATTATATTGGGGGCACTAAAAGAAGGTGAACTGTAGTCGAAACATTTATACTTTCTCTCATGGAGTTAATTGGTGGTATGAAACAAGGGCACAAATCTCTGTTTTTATTTATGTTATTGCATTTTGGTGTGTTTCATGCCTACAAGGAAGTTGTCCTGGCCAAAATATATTAAAAAGGAAAATATATCCTGCACGTTTTTTACGTACAAACATGAATTTCATCTATTTCAGTACATTCTAATTGGTGCAGTCTGAAAATTGTTCAAATTTTATTTCAGGGAAAGAACAGAGGTTCAAAAGCAAAAAGGAAATCTTCTGTCGAAAAATCAAATAACTTAAATGATGAAGATGATGATGCATTACAACAGGTAGATTCATAATATTCCATCGGTACTTTGTAATTCAAGACAGCACAAACAGGCTAACAATATCATATGCTTCCCAAGCAGGCGATCAAACTTTCACTACAGGATTCTGGTGAAACCTCTGATGCACAGATGCAAGGTCCTTTTGAAAATGTTAGAAGGAAAAATGTGAAGAATCAGGAAATGGGAAGAGGGATGAAGAGAAAAGGATTGGTAGCCTTTTCACTCATAACGTAGTATTATAGCCTTAGTGATCCTTTATTCATCTTTTCTCTTAATTCTTTTTCTTTCACATCTGAACTGCAGTTCACTAGTCGGATGCAGATGAACGAGGATGAACTTATCATGAACTTCTATTGTTTTGATGGTATCTTATATATCTGGTATGATATTAATGCACTTTAAAGTAAGTTTTACTACTGACCTGGTGAACTTGGCTTATAGAATCATGGAAAGGGAGCATTACTGTAAGTGACCTGAAAAGAGTGGCAGCTGTTCATGATTTTACTTGGTCTGTCAAAGAATTAGAGGATATGATTAATTGCTTTGACAGTGATGGAGATGCCAAGGTTAGTTTCTTGGATTCACGCTCTCTTTTCATATTTCAATTCCATTCTCTCTTTATAAGATGAATTGTAATCTTCGTATAGTTTTCAAGTCTGAGATATATGTTCTCGATTGTTTCATTCAAGATTATAAATTTTTAACAATACCGTCAAACTCAACGGGGATAGGACATGATACATATTTAGTTGACTTGCTTAGAAAAAGACATCTTGACGTCAAAGACAATGATGGACATGAGAACCTTTATATGTTTATATCTCAAACTACTGAAATATTTTTCTGAAGGAAAATTTTGTTACCAGTTACTTGTGAAGGTTTGTGGCTTGTTTCCGCCGGTAAATATAGCTACTTTTATCTACCATCATGTCCAACCTATCTTGTTTGAATTAAGCTTTGTTTGATCATCCTTTCCGAGATTACGTGTCCATTTTCGTTTCCATCACAGTTAAGTATGGATGACTTTCGAAGAATTGCTAGTCGATGTAACATGATAAAGGAGTCCATTACATGACCGACGCAGATGACGACCAATGTGCGGAGGAGGATGGATATAGGAAGAATGGAAGAGGATGGCAATATCGATTGTCTCTCCCTCTGCTTTTTTCTAGAACAATCAAATGGAGGCATGCTCTTTATCCAATCATTCATCAGAAAATTATGAGGTTTGTTGCACAGAGCATCAAAACATTCTTTTTGGAAGACAAAGCTCTAACGATCATCATAAGATGAGGGGGCATAATGGCTCCGATCGAGAACGGTGACCAATCTTCATGATTTTGTTGAAATCCCAGGTATTGTAGAGCATTTAAACTTGTTGTCGTAATTGTGAAATTCTGATCCCATGTGTTTCAATCTTCGAGATCTGTCTTTCAATTTTGATACCCAGGTAAAAGATGTATGATTGCATTTGGCATTGTCATGGTTCCTAGATTGTGATATCCCTGCTATACTGGTTTCTTGGTTCATGTGGTTTACTAGTATTTCGGTTAATATGGTTAGAGGGCACTTATTTATGATTGAATGTTTTGGAATGCTGAATCTGCAAGATCTTTCATTCTTGTGTCGGTTTTGAAGGTTTATTACTGTAACAGCCCAAGCCTATCGCTAACAGGTTTTGTCCGTTTTGGTTTGTTACGTATCGCCGTCAGCCTCAATGTTTTAAAACGCGTCTACTAGGGAGAGGTTTCTTCACCCTTATAAAGAATATTTCGTTAGATCTCACAATTACGTTCTTTTTTCGGTTGAATGAGATATAAAATACAAATTTGGACTCATTTTCTCTAAACGACCTCTCTGCTTTTTCGATACCGTAACGATCATTTGGCTTATAGTGGTTAGCTTTGACCGTACTTTAGACATGGATTTATAGGAATTGTGGATACTTTCGAAACTGTAGCAATGAGTCTTCTGTGGAACCATATTTGACTATTTACGCAGGATTGCACCATTTAGAGGAAACTGGAAATGCCATCAGGAACTGGTTTTGCTAGAACTGCATTATTACGTTTAACATTCATTTTTCACTTTAAAACCTTAAATTTAAATATTTTTTTTACAAGTTTATATTAATTAAACTAAGACCCTCTATTACAATTTTGTTTTAAAATTGTTAAACGCACAACTTTTCTACACGCGTGTGAGATTTTTTTAAATATAAAAATCGATATAAATCTTTCCCTATTACTTTCTACTTGTTTAGAAATAATTACGTTAATCGGAATAGCTATAAAATCTCGATCAATTCACATATGAAATTTTAGGAATTTTAAGGTTCTAAGTTGAACATAGTTATTAGTTTCGAATTTTAATTGACCAAAGCTAAACAATCTAACTCAATCCAAAGCTAGGTGAAGATCAACTTCAATGACATCCACATTTCCTCCGGTAATATTTCTTTGCCAAACAACCTTACTTTTCAAATACAATAAAGTCTCTCCATGCCCGACGGATAAGATGAAAATATTCATTTAAAATAATTCATAAAAGGTGTCATGGATTATATAACGTTTGTAGTAGAATCTTCGAAAAAAAACAATAAAGCAAAAAAACCATAACGTGAAATTTTAAATAAATAAGAAAATTAAACAATGTCTTAAGCTAACTTAAGGACTATAAAATAGACATAAATATGACTACCCTAATACCGATTTTATGACTTTCATTGTGACGCTGCCATTGTACATGAATGTCTTACCTTTACTTCATAAATAAAAGTGACATGTGATTTGAGTATTTTAAGAAATAGTCACTAAGTAGCCCCATTTTTGGAGTTGGAAAATACAAACATATGCAATATGGTGAGATCTATCATTTTAAAAACATCATAGCATGCCCTCAGGGCGGCTTTCCAATTAGAGACAGTGTTGGATGTATAGTATTTCTCTATAACACAGTTCACGTATGCGTACATAGAAAATTGACTTACCGAAATGGCCTCGAAACGATAACATTACTTCTTGTGTGGCTTAAGTCTGTGCAATACTAGGGATGAACAATGTACATACCCTTTTTCTTTTCTTTTTATTATTATTATATTTTTAATCTTTGTTGATTGTTACATGTAGGGTCGTTCTAATCTTGCTCGTTAACAACATTCAATTAAATATCTACAATTTTTCCCGTATGATATCCTAATATGTTTGAAGGCGTCTGGTGTGACTTATTGTAAGCGACACTCATCCCAAAAAAAATTTTCGTATGGTATCCCAATCATGGTGTGACCTATCATTTCATAAAAATATCATAGCCTTGAACTCTACTTTTTAGTCCATACAAAATTGGATGTGTAATACTTCTATACACACGGCACACGCATGCATACATAGACCCACCAAGCGGGTTTGTATACGTATCCTTGGGACTAGCCTCCAACTAACGCACACTCACATTGTCAAAGCCACCGAGGGAAAGGAGCCCACATAGTATCATGACACACATAAATATTGTATTGTCACGTCCATACTCATCATAACGGAGAAATATCCCGATGCACGTAATATACATAATGCTTGAGGTCCTATAATATCAAATCATGGCATATACTAATGATGCAAATCATATCTTCATTCTTTTCATGACATAGCATTTCTACGATACATGCATACGTATAATGAACATATCTTTCATGGTTAACATACATGACATATTGTTAGCATGACTTATCAATGTCTCTATCCCCTCTCCCTTTTCATTTATTTTTGTCAAGATCGAGGTTGAGATTCCCCATGAAAAACTTGTAGGGATCCGATTTCCTCAGAGAATTTTCTCCATCTTTTTGTATATTTTACAAATATATATATATTTATTTATTTTAATTCCTATTTTTCAATATAATTTCTATTAAAAAAAATAAACCACCCTTATAAACTCAATAATATTTCTTAATTAAAAATATATATAATATTCAATATAATTTCTAAAAACTCAAATTTTAATTTTATACACGTAAATATATGTATTTGGTGAGGTTGGGACATAGATGGAGATAGGGAATAAGTCTCTCTTCAATCATGTACCATAGGATAACTTTCATACCATTTAGGTGCGGTGGATTAAGCAAACATTCTCAAATACAAGTGATCGCTAAGCAATAATCGTATTGAATATCTAGAAACAAATATCTCGGATCTACCCTCCACCCATTATACAAATCATAATCTTAAACAAAATCAAGTATAAACAGCTGGTTTCTTCGAATCCTTCAAACAGAAGTGAAAAGACGAGCATCGAATTTACCTCGGCAGCATTCTTGCAAGATCAAGCTGGCTAAATCATCACATAAACTGAGGTCAGCCATAGCCATGAGCTCCTTCAGCTGGTTTCGAGTCATCACTACTTTGATCCTTAAAGGCCTCGAACAGCTTCTCAGTCCTTCGTGGCCTTCAATTGGGTGTATCACTCTTCTCTTTCCAATCCAATTCCCCATCTTCTTTGCCTCTCTCTCTCTCTGCTTCTCTTCTTAATTGGCGTTTGGAAACTCTCTCATAGAACACCAAAAGCTGAAGGGCTTATTATCTCCATTATTTTCAGCATTAAAGATGGCAGTTGAAACTTAATTGTTCTAAGCTTTAAAGTGGAGTCCCCATGACATTCAATGCATTTAATTCATTGGGTTTGTAGTTAGCAACTTAATCATCTTATGTAATTCAATTTCGGTCGGAAAAGTCCGGATGAGTTTGAACGATTACAAACGATACCAGAGTCAGGTTCCAACTGATGTGCCAATGAGGAAGCTGAGTCTCAAAGGAGGTGGACACGAAGTGGCGTTCAAGCAAAGACGTTAGTCCATGAAATGGGGTGAATTAAGGGGTCCCACATCGATTGGAGAATGGGACGAGTGTCAGCGAAGAGAATATTTATGAGTGAGTGTGGAAACCTCTACTTAAGAAGAGAAAAGTCCGAATAGGGTATTTATATCCATTCATGTCCATTTATCTTCAATTTAGTTTCCAACCCCTATGTAATATTCAACCTATCCACTTCTCCCAAGTCTCGTTGATTCGATCTGATCTTAAATGTTTCAATTTAGTCATCGATCCAATTTTATTATGGTCTTAATTATAGCGGTAAACATTTTAATTCAGTCTCAATTGAACACATTTTCTATTTTTTTTCGACCAAGGGGTCTGTATAGTTGTAGATGCTAAGTACTATCTCTAGCAATTTGCAAGATTAGTAAAGATAGTGGAAGGCTTAATTTATGCACGGTAGCCGTGTTCATTCGTTGGGTTGGAACATTTTTTAGACCTAATCTAATTGTTTAAGTTGCAACGTTTTTCAACCCTGGTTAAATAATAAACCTAACTTGACCCAACTATAATTTTTTTTAGTTGAGTTGCTTTTGTTCAAACATTTAATTAAATTTTGTAATTCAATTTTAAAATATATTTTGAAAAATTATCTTCTAAATAGTTAAAAAAAAATAATTTTTAAAAATAATTAGAAAATAAATAACAAAAAAATATGAAATTAAATAAATAATGTATTATTGTATATCAAGCAAAAATATATATATATATATATATATATATATATATTTCATAATTAACAATAAATTCGGGTCGGTTTAATTCAAGTAGGGAATTCATGAACAACTCATTCATAAAATTTTCATTTATTTATTTGAGCTAAACTCCCTTCTCTTTTGATTTTTTTTTTTTTTTTTGTACTGTATTTATTTAATTTAATCATGCAACGTTAATGATCTTGACACGCTTATAACAAATTTTAAGGGAAACTCAAGTTCTATATACATTTTTTCATCCTCCACTTCACTTTGTAGCTTTGTTGGACCTTAGACGAGATTTATTTTAGTCAACAAAACATAATTCATTTGAAATTTAAGTTTGTTCGGCCACACACGTAGCTCGTGCGTGCATCTTCAATTGTCTGCAACCTTAATCGACTTTGCTTTATACTAGGCTAAATCATTTGACTCGCTTCTATAAAGTCACACATTGGCTAATTTAAGGAATGTTCATGAATTTATAATCAAGAAATACTATTACATTGTTACGAGACTTTTTGAAGAATCCCAAACCTATTGGATGAAGTAATTATAGTTAAGAATATCATTTCCTTATAAATTGAGTTAATAATATATTTTTCTTTTTTTTAAAAAAAAAAAACCCTATCCCCTCTTTTCTTCTGCCCTTAGGTTTATCTTCAGTCGCTACCCATTTTCGCAGAAATCCATCACCAGCCAGTCTCCTTCTTCGACGTTAGCAGCTGGTCCTCCGACCAGTGACCCAGCCGCCGGCGACGAACTCGAGAAGTTTTCTTCTCTGGCGCGAGCACCTATCACGAGCCGCGACGCACAGGTCAGCAGTTGGTCCTTCGACGAACGCACGTCCACTGATTTCTCTTCCCAGGTGACATTCGGAAGCAACCCACAACCCGAATGCCTCAAATCGGATTCCCCATAACCTGTAAAAGTGAGATTTAGTTCGAACCTGTTCGAACACATTCCAGCAAAGACTAAAGCCTTGGATAGTGGGTGGGCTCTTTACGAGTTTACTAAGTGTATTAATTCTGATTCTAACTATTGGAAGTTTTTTGTATATAGGTTCGGACTGCTCGATTCAAGTTTAAGGTTGACATTGGGTAAGAAATAGCTGTCGATTAAGGTTTAAAACGGAACTTTAACCTTGAAATCTTGTCTACAATTTCTTATAGTAGCGCTTTATAACGTAAAGTAGTTCTTACTTGTGAAGTCTGTTCCTTGTTATTTTTATGATCTATAAAATTTAATTTGTATGCGATTATAAACTGTTTTGGGTTCTGGTAAGTATAATTATGCTGTGTTGTTGAGTTACATCCTTGTGATGATGGATATGTTGGATGTTGAAATTTTCTGAAATTATATGATAGTATGATGCTTATGTCGGAATCTGGTTCATGTTGTTAATTTTCAGAAATATGGCTCCGAAAGCATGTTAGAATGTGCATACATGGGAATTTGTGAGACTGATTGGTGAGGGAGGGTTAGAAGATCTTAAAAGTGAGGACAGTGTCTGGGCTTTGGATATAAATGATTGACGGTTGGTATTGTGTTATGGAAAGTAAGTGAATATCAGGCCTCAAGTATGAATGGTTAAGGATTGGTGTGTCACTATCGGGTGTCAAGGCCTGTAGTATATATGGTCGGGAGTCGACATGCCAATATTGGATAAGAGAAGTATCAAGGCCTTGGGTATAAACGCTCAAGAGCCGGTGTGATGAGCTTTTATACAAGCATTGGGGCCTTGGGTGTAAATGGTCGAGGGTTGAACGTTGCGTTTTGTAGAGAAGGGTTGAGGATTTTGGTATAAATGATCAGGAGTCAATGTGTCTTGCAAGAGTAAATCTCAAAGATGTGGAAAAGATTGAATGGAGTTAGAAAGAGCTAGAAAGAGCTAGAAAGAGCTATGAGAACTCAGTGATGTTCGAGAGTTTGTTAGAACTTGAGTTCGAGGATAGGCGTGCACGACATGAATATTGTGGATGATATGATTATGATTCATGAGCTGAATATGTCACATATATTTACTTGTTTTCATATTTGTTGTGAGAGCATGATGTGATGTATGTTGTATGCTGTTGGTAAAAATTGATACAACTTGCATTATAAATAGACCAATATAAATAAACCATGGGTGAAAGTATTTAAAAGTTCTTTCTCACTGAGTCAAGTATTACTATTATCAAGTTTGTTCAAGAAAGTAGAGCCATTTGTTAGATAAGAGAGTTACTAAGATGAGAATTGGGGATAAGAACTTTTCTAATCAGAACGATCCCTAGTTCATTTTTACAATGAACGTTTTCAATATCGATGTTGATGAAAATACCAAAAAAAATTGTAAATAAAGAATTCAAAAAAGAAAATTAAATTGGACTTAAGAACATAGGCATTGTTCCCTTTGTTTTTCATGCGGCTTTGTTCCTTACACTCTGCAATGATGTTGCTTAAACAGGTAACTTCGATATGATTCTCAATGGATGCACCACACCCACTGGCTTCTTCTTCTCAAATTCCAGGTTGTCTATCCCTAACCGTTCTGCGATCTCACGTAGTCCTGATTGCAGTATGCATGCTGCTGCTAGCATTAGAAGTTCAAGGGAACCTCATTTAGAGCATCAAACATGTCGCTATAGAGGTGCATACGAAGCCTTTCACAATCTTTATTCATCTTTTATTTGATCTTTTTATTGAAACAACTATAACTGTGGTGGAGACGTAAATGTAAAGAAATTACTGTCTGACTTTTGTGACAATTGCTTCTTGAAGTAATCCATTATTTTTCAAATGTAGGTGTCTTTCCCTTAAAACTAGGTGCTGGATCTTCCCATTTCTTAAGCGGGGATCTAGGTGGCTTGCTACATACAATCCCAAGGTTACCAAGGAAAAGAAATGTTGGCATGACACCACGGGCAGCCAAAGATATCCCTACGAGTTATCGTTTCCCTCCGATGACCACTAAACCAAAATGGTGGTGGAGGACATTGGCATGCTTACCCTATCTAATGCCCTTTCACGAAACTTGGATGTACTCTGAAACCGCGTACCACCTACACCCGTTCCTGGAGGACTTCGAATTCTTGACATATCCATTTCTCGAAGCCCTTGGACAACTACCAACTTGGTTCTTGATTGCATATTTCTTTATTGCCTATCTAGGAATTGTAAGACGTAAGGAATGGCCACACTTCTTTAGATTTCACGTAGTCATGGGCATGTTGTTGGAGATTGCCCTGCAAGTGATTGGTACAGTGAGCCGTTGGATGCCCCTTGCAGTCTATTGGGGTAAAGTAGGGATGCACTTTTGGACAGCCGTATCGTTCGCTTACCTATTCACGGTTTTGGAAGCCGTTCGCTGTGCCCTTGCAGGCATGTATGCCGATATCCCTTTCTTCTGTGATGCAGCCTACATCCAAATTCCATACGATTAA

mRNA sequence

ATGACGCGTACCCAACACGACACTCCAATGTCTGATTCCGAGCGCAAGGAAGCTCCTAATTCTTCAAGCACTGACACAAAGAAGACGCCCAGAGGTTCCATCAGTGGCGGAGACGTCAAGGATACGCCGGAGTATGAGAAACAGAGGCTTTCTAGAATCGCCGAGAACAGGAAGAGAATGGAAGCCCTTGGATTGGCCAAATTGGCGACCTCATTTATGGATTCTTCCAAGACTCTGAGGAAGATTGATAGAAAGGGGAAGCGTAAGTTCGATGAAGATTATAATCCTGGCGAGGATTCTTCGAATTCTGAAGATGATGACTCGGAGGAAGGGGATGAAGGTTTTGGAAGTGGGAAAGTTTCTAGGTCTTGTGGAATGAAGGGAAAGAACAGAGGTTCAAAAGCAAAAAGGAAATCTTCTGTCGAAAAATCAAATAACTTAAATGATGAAGATGATGATGCATTACAACAGGCGATCAAACTTTCACTACAGGATTCTGGTGAAACCTCTGATGCACAGATGCAAGGTCCTTTTGAAAATGTTAGAAGGAAAAATGTGAAGAATCAGGAAATGGGAAGAGGGATGAAGAGAAAAGGATTGTTCACTAGTCGGATGCAGATGAACGAGGATGAACTTATCATGAACTTCTATTGTTTTGATGAATCATGGAAAGGGAGCATTACTGTAAGTGACCTGAAAAGAGTGGCAGCTGTTCATGATTTTACTTGGTCTGTCAAAGAATTAGAGGATATGATTAATTGCTTTGACAGTGATGGAGATGCCAAGATGACGACCAATGTGCGGAGGAGGATGGATATAGGAAGAATGGAAGAGGATGGCAATATCGATTATTGTGATATCCCTGCTATACTGGTTTCTTGGTTCATGTGGTTTACTAGTATTTCGGTTAATATGAAATCCATCACCAGCCAGTCTCCTTCTTCGACGTTAGCAGCTGGTCCTCCGACCAGTGACCCAGCCGCCGGCGACGAACTCGAGAAGTTTTCTTCTCTGGCGCGAGCACCTATCACGAGCCGCGACGCACAGGTCAGCAGTTGGTCCTTCGACGAACGCACGTCCACTGATTTCTCTTCCCAGACTAAAGCCTTGGATAGTGGGTGGGCTCTTTACGAGTTTACTAAGTGTATTAATTCTGATTCTAACTATTGGAAGTTTTTTGTATATAGGTTCGGACTGCTCGATTCAAGTTTAAGGTTGACATTGGGTAACTTCGATATGATTCTCAATGGATGCACCACACCCACTGGCTTCTTCTTCTCAAATTCCAGGTTGTCTATCCCTAACCGTTCTGCGATCTCACGTAGTCCTGATTGCAGTATGCATGCTGCTGCTAGCATTAGAAGTTCAAGGGAACCTCATTTAGAGCATCAAACATGTCGCTATAGAGGTGTCTTTCCCTTAAAACTAGGTGCTGGATCTTCCCATTTCTTAAGCGGGGATCTAGGTGGCTTGCTACATACAATCCCAAGGTTACCAAGGAAAAGAAATGTTGGCATGACACCACGGGCAGCCAAAGATATCCCTACGAGTTATCGTTTCCCTCCGATGACCACTAAACCAAAATGGTGGTGGAGGACATTGGCATGCTTACCCTATCTAATGCCCTTTCACGAAACTTGGATGTACTCTGAAACCGCGTACCACCTACACCCGTTCCTGGAGGACTTCGAATTCTTGACATATCCATTTCTCGAAGCCCTTGGACAACTACCAACTTGGTTCTTGATTGCATATTTCTTTATTGCCTATCTAGGAATTGTAAGACGTAAGGAATGGCCACACTTCTTTAGATTTCACGTAGTCATGGGCATGTTGTTGGAGATTGCCCTGCAAGTGATTGGTACAGTGAGCCGTTGGATGCCCCTTGCAGTCTATTGGGGTAAAGTAGGGATGCACTTTTGGACAGCCGTATCGTTCGCTTACCTATTCACGGTTTTGGAAGCCGTTCGCTGTGCCCTTGCAGGCATGTATGCCGATATCCCTTTCTTCTGTGATGCAGCCTACATCCAAATTCCATACGATTAA

Coding sequence (CDS)

ATGACGCGTACCCAACACGACACTCCAATGTCTGATTCCGAGCGCAAGGAAGCTCCTAATTCTTCAAGCACTGACACAAAGAAGACGCCCAGAGGTTCCATCAGTGGCGGAGACGTCAAGGATACGCCGGAGTATGAGAAACAGAGGCTTTCTAGAATCGCCGAGAACAGGAAGAGAATGGAAGCCCTTGGATTGGCCAAATTGGCGACCTCATTTATGGATTCTTCCAAGACTCTGAGGAAGATTGATAGAAAGGGGAAGCGTAAGTTCGATGAAGATTATAATCCTGGCGAGGATTCTTCGAATTCTGAAGATGATGACTCGGAGGAAGGGGATGAAGGTTTTGGAAGTGGGAAAGTTTCTAGGTCTTGTGGAATGAAGGGAAAGAACAGAGGTTCAAAAGCAAAAAGGAAATCTTCTGTCGAAAAATCAAATAACTTAAATGATGAAGATGATGATGCATTACAACAGGCGATCAAACTTTCACTACAGGATTCTGGTGAAACCTCTGATGCACAGATGCAAGGTCCTTTTGAAAATGTTAGAAGGAAAAATGTGAAGAATCAGGAAATGGGAAGAGGGATGAAGAGAAAAGGATTGTTCACTAGTCGGATGCAGATGAACGAGGATGAACTTATCATGAACTTCTATTGTTTTGATGAATCATGGAAAGGGAGCATTACTGTAAGTGACCTGAAAAGAGTGGCAGCTGTTCATGATTTTACTTGGTCTGTCAAAGAATTAGAGGATATGATTAATTGCTTTGACAGTGATGGAGATGCCAAGATGACGACCAATGTGCGGAGGAGGATGGATATAGGAAGAATGGAAGAGGATGGCAATATCGATTATTGTGATATCCCTGCTATACTGGTTTCTTGGTTCATGTGGTTTACTAGTATTTCGGTTAATATGAAATCCATCACCAGCCAGTCTCCTTCTTCGACGTTAGCAGCTGGTCCTCCGACCAGTGACCCAGCCGCCGGCGACGAACTCGAGAAGTTTTCTTCTCTGGCGCGAGCACCTATCACGAGCCGCGACGCACAGGTCAGCAGTTGGTCCTTCGACGAACGCACGTCCACTGATTTCTCTTCCCAGACTAAAGCCTTGGATAGTGGGTGGGCTCTTTACGAGTTTACTAAGTGTATTAATTCTGATTCTAACTATTGGAAGTTTTTTGTATATAGGTTCGGACTGCTCGATTCAAGTTTAAGGTTGACATTGGGTAACTTCGATATGATTCTCAATGGATGCACCACACCCACTGGCTTCTTCTTCTCAAATTCCAGGTTGTCTATCCCTAACCGTTCTGCGATCTCACGTAGTCCTGATTGCAGTATGCATGCTGCTGCTAGCATTAGAAGTTCAAGGGAACCTCATTTAGAGCATCAAACATGTCGCTATAGAGGTGTCTTTCCCTTAAAACTAGGTGCTGGATCTTCCCATTTCTTAAGCGGGGATCTAGGTGGCTTGCTACATACAATCCCAAGGTTACCAAGGAAAAGAAATGTTGGCATGACACCACGGGCAGCCAAAGATATCCCTACGAGTTATCGTTTCCCTCCGATGACCACTAAACCAAAATGGTGGTGGAGGACATTGGCATGCTTACCCTATCTAATGCCCTTTCACGAAACTTGGATGTACTCTGAAACCGCGTACCACCTACACCCGTTCCTGGAGGACTTCGAATTCTTGACATATCCATTTCTCGAAGCCCTTGGACAACTACCAACTTGGTTCTTGATTGCATATTTCTTTATTGCCTATCTAGGAATTGTAAGACGTAAGGAATGGCCACACTTCTTTAGATTTCACGTAGTCATGGGCATGTTGTTGGAGATTGCCCTGCAAGTGATTGGTACAGTGAGCCGTTGGATGCCCCTTGCAGTCTATTGGGGTAAAGTAGGGATGCACTTTTGGACAGCCGTATCGTTCGCTTACCTATTCACGGTTTTGGAAGCCGTTCGCTGTGCCCTTGCAGGCATGTATGCCGATATCCCTTTCTTCTGTGATGCAGCCTACATCCAAATTCCATACGATTAA

Protein sequence

MTRTQHDTPMSDSERKEAPNSSSTDTKKTPRGSISGGDVKDTPEYEKQRLSRIAENRKRMEALGLAKLATSFMDSSKTLRKIDRKGKRKFDEDYNPGEDSSNSEDDDSEEGDEGFGSGKVSRSCGMKGKNRGSKAKRKSSVEKSNNLNDEDDDALQQAIKLSLQDSGETSDAQMQGPFENVRRKNVKNQEMGRGMKRKGLFTSRMQMNEDELIMNFYCFDESWKGSITVSDLKRVAAVHDFTWSVKELEDMINCFDSDGDAKMTTNVRRRMDIGRMEEDGNIDYCDIPAILVSWFMWFTSISVNMKSITSQSPSSTLAAGPPTSDPAAGDELEKFSSLARAPITSRDAQVSSWSFDERTSTDFSSQTKALDSGWALYEFTKCINSDSNYWKFFVYRFGLLDSSLRLTLGNFDMILNGCTTPTGFFFSNSRLSIPNRSAISRSPDCSMHAAASIRSSREPHLEHQTCRYRGVFPLKLGAGSSHFLSGDLGGLLHTIPRLPRKRNVGMTPRAAKDIPTSYRFPPMTTKPKWWWRTLACLPYLMPFHETWMYSETAYHLHPFLEDFEFLTYPFLEALGQLPTWFLIAYFFIAYLGIVRRKEWPHFFRFHVVMGMLLEIALQVIGTVSRWMPLAVYWGKVGMHFWTAVSFAYLFTVLEAVRCALAGMYADIPFFCDAAYIQIPYD

Homology

[Close]

BLAST of Csor.00g230340 vs. ExPASy Swiss-Prot
Match: Q8GZ79 (Protein TIC 20-I, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TIC20-I PE=1 SV=1)

HSP 1 Score: 366.7 bits (940), Expect = 5.7e-100
Identity = 170/213 (79.81%), Postives = 190/213 (89.20%), Query Frame = 0


Query: 469 RGVFPLKLGAGSSHFLSGDLGGLLHTIPRLPRKRNVGMTPRAAKDIPTSYRFPPMTTKPK 528
           RGV    L A SS  L+G+ G L  T+P LP +R   +TPRA+KD+P+S+RFPPMT KP+
Sbjct: 62  RGVPLSYLSASSSLLLNGEQGSLSGTLPVLPVRRKTLLTPRASKDVPSSFRFPPMTKKPQ 121

Query: 529 WWWRTLACLPYLMPFHETWMYSETAYHLHPFLEDFEFLTYPFLEALGQLPTWFLIAYFFI 588
           WWWRTLACLPYLMP HETWMY+ETAYHLHPFLEDFEFLTYPFL A+G+LP+WFL+AYFF+
Sbjct: 122 WWWRTLACLPYLMPLHETWMYAETAYHLHPFLEDFEFLTYPFLGAIGRLPSWFLMAYFFV 181

Query: 589 AYLGIVRRKEWPHFFRFHVVMGMLLEIALQVIGTVSRWMPLAVYWGKVGMHFWTAVSFAY 648
           AYLGIVRRKEWPHFFRFHVVMGMLLEIALQVIGTVS+WMPL VYWGK GMHFWTAV+FAY
Sbjct: 182 AYLGIVRRKEWPHFFRFHVVMGMLLEIALQVIGTVSKWMPLGVYWGKFGMHFWTAVAFAY 241

Query: 649 LFTVLEAVRCALAGMYADIPFFCDAAYIQIPYD 682
           LFTVLE++RCALAGMYADIPF CDAAYIQIPYD
Sbjct: 242 LFTVLESIRCALAGMYADIPFVCDAAYIQIPYD 274

[Close]

BLAST of Csor.00g230340 vs. ExPASy Swiss-Prot
Match: Q9ZST8 (Protein TIC 20, chloroplastic OS=Pisum sativum OX=3888 GN=TIC20 PE=1 SV=1)

HSP 1 Score: 300.4 bits (768), Expect = 5.0e-80
Identity = 145/233 (62.23%), Postives = 172/233 (73.82%), Query Frame = 0


Query: 449 AAASIRSSREPHLEHQTCRYRGVFPLKLGAGSSHFLSGDLGGLLHTIPRLPRKRNVGMTP 508
           A +SIRS     LE++    RG+    + A SS  LSG    L  TIP LP       TP
Sbjct: 25  AVSSIRSFWGHSLENKP---RGMTFTDMSATSSLLLSGGQNFLSRTIPVLPTLHKSSTTP 84

Query: 509 RAAKDIPTSYRFPPMTTKPKWWWRTLACLPYLMPFHETWMYSETAYHLHPFLEDFEFLTY 568
           RA KD  + +RFPPMT KP+WWWRTL+C+PYL+PFH+ WMY+ TAYHLHPF+  F+ +TY
Sbjct: 85  RATKD-SSGFRFPPMTKKPRWWWRTLSCIPYLLPFHQAWMYARTAYHLHPFIPYFQPMTY 144

Query: 569 PFLEALGQLPTWFLIAYFFIAYLGIVRRKEWPHFFRFHVVMGMLLEIALQVIGTVSRWMP 628
           PFL A+G LP W LIAYF IAYL IVRRKEWPHFFRFHV +GML+EIALQV G VSRWMP
Sbjct: 145 PFLMAIGTLPRWSLIAYFLIAYLTIVRRKEWPHFFRFHVAVGMLIEIALQVTGIVSRWMP 204

Query: 629 LAVYWGKVGMHFWTAVSFAYLFTVLEAVRCALAGMYADIPFFCDAAYIQIPYD 682
            + YWGK+GMHFWT   F +LFT +E +RCAL GMYAD+PF CDAAYIQIP++
Sbjct: 205 RSFYWGKLGMHFWTTAFFVFLFTTIECIRCALVGMYADVPFVCDAAYIQIPHE 253

[Close]

BLAST of Csor.00g230340 vs. ExPASy Swiss-Prot
Match: Q9ZQZ9 (Protein TIC 20-IV, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TIC20-IV PE=2 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 3.1e-37
Identity = 98/260 (37.69%), Postives = 141/260 (54.23%), Query Frame = 0


Query: 420 TPTGFFFSNSRLSIPNRSAISRSPDCSMHAAASIRSSREPHLEHQTCRYRGVFPLKLGAG 479
           +P    F N R+  PN  + ++     +  +AS  S R P  E               A 
Sbjct: 23  SPISKKFVNPRVFFPNVDSSAK-----LRLSASSISRRCPR-EIAPLSATASVDFAAAAT 82

Query: 480 SSHFLSGDLGGLLHTIPRLPRKRNVGMTPRAAKDIPTSYRFPPMTTKPKWWWRTLACLPY 539
           SS+ L  +  GL    P L R R      R AKD     + P +  +P+WWWRTLAC+PY
Sbjct: 83  SSNQLFAN--GLPPLAPGLRRHRRPIEPARVAKDDFFKIKLPKIAERPEWWWRTLACVPY 142

Query: 540 LMPFHETWMYSETAYHLHPFLEDFEF---LTYPFLEALGQLPTWFLIAYFFIAYLGIVRR 599
           L+    +   S+  +++ PFLE  +    + Y    A+ + PTWF + Y ++ Y+ +V+ 
Sbjct: 143 LI----SLQISDVGFYVQPFLEKHDAIGDMIYFIPGAINRWPTWFFMVYCYLGYMWVVKN 202

Query: 600 KEWPHFFRFHVVMGMLLEIALQVIGTVSRWMPLAVYWGKVGMHFWTAVSFAYLFTVLEAV 659
           KE PH+ RFH++MGMLLE ALQVI   S + PL  + G+ GM++W A+ F Y+  +LE +
Sbjct: 203 KELPHYLRFHMMMGMLLETALQVIWCTSNFFPLIHFKGRFGMYYWMAIGFTYICLLLECI 262

Query: 660 RCALAGMYADIPFFCDAAYI 677
           RCALAG+YA IPF  DAA I
Sbjct: 263 RCALAGVYAQIPFMTDAASI 270

[Close]

BLAST of Csor.00g230340 vs. ExPASy Swiss-Prot
Match: P73387 (Tic20 family protein OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=sll1737 PE=3 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 4.5e-04
Identity = 41/156 (26.28%), Postives = 72/156 (46.15%), Query Frame = 0


Query: 532 RTLACLPYLMPFHETWMYSETAYHLHPFLEDFEFLTYPFLEALGQLPTWFLIAYFFIAYL 591
           R  + L Y++P  + +M+        P L+       P L+   Q P    I  F + ++
Sbjct: 12  RFFSALIYVIPLIDAFMFGGFLLQQFPVLQIIYLPIMPLLQFYYQFPFASFI-IFIVLFM 71

Query: 592 GIVRRKEWPHFFRFHVVMGMLLEIALQVIGTVSRWMPLAVYWGKVGMHFWTAVSFAYL-- 651
            +VR     HF RF+ +  +L+ I L + G +  ++   V+    G+   T  +FA+L  
Sbjct: 72  AVVRNNNISHFIRFNAMQAILIGILLSLFGLIVAYVIQPVF--GQGLVTETLYNFAFLGA 131

Query: 652 -----FTVLEAVRCALAGMYADIPFFCDAAYIQIPY 681
                F ++++V     G YA+IP   DAAY Q+ +
Sbjct: 132 LACGFFGIVQSV----LGRYAEIPTISDAAYSQVRF 160

[Close]

BLAST of Csor.00g230340 vs. NCBI nr
Match: KAG6575237.1 (Protein TIC 20-I, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1347 bits (3485), Expect = 0.0
Identity = 681/681 (100.00%), Postives = 681/681 (100.00%), Query Frame = 0


Query: 1   MTRTQHDTPMSDSERKEAPNSSSTDTKKTPRGSISGGDVKDTPEYEKQRLSRIAENRKRM 60
           MTRTQHDTPMSDSERKEAPNSSSTDTKKTPRGSISGGDVKDTPEYEKQRLSRIAENRKRM
Sbjct: 1   MTRTQHDTPMSDSERKEAPNSSSTDTKKTPRGSISGGDVKDTPEYEKQRLSRIAENRKRM 60

Query: 61  EALGLAKLATSFMDSSKTLRKIDRKGKRKFDEDYNPGEDSSNSEDDDSEEGDEGFGSGKV 120
           EALGLAKLATSFMDSSKTLRKIDRKGKRKFDEDYNPGEDSSNSEDDDSEEGDEGFGSGKV
Sbjct: 61  EALGLAKLATSFMDSSKTLRKIDRKGKRKFDEDYNPGEDSSNSEDDDSEEGDEGFGSGKV 120

Query: 121 SRSCGMKGKNRGSKAKRKSSVEKSNNLNDEDDDALQQAIKLSLQDSGETSDAQMQGPFEN 180
           SRSCGMKGKNRGSKAKRKSSVEKSNNLNDEDDDALQQAIKLSLQDSGETSDAQMQGPFEN
Sbjct: 121 SRSCGMKGKNRGSKAKRKSSVEKSNNLNDEDDDALQQAIKLSLQDSGETSDAQMQGPFEN 180

Query: 181 VRRKNVKNQEMGRGMKRKGLFTSRMQMNEDELIMNFYCFDESWKGSITVSDLKRVAAVHD 240
           VRRKNVKNQEMGRGMKRKGLFTSRMQMNEDELIMNFYCFDESWKGSITVSDLKRVAAVHD
Sbjct: 181 VRRKNVKNQEMGRGMKRKGLFTSRMQMNEDELIMNFYCFDESWKGSITVSDLKRVAAVHD 240

Query: 241 FTWSVKELEDMINCFDSDGDAKMTTNVRRRMDIGRMEEDGNIDYCDIPAILVSWFMWFTS 300
           FTWSVKELEDMINCFDSDGDAKMTTNVRRRMDIGRMEEDGNIDYCDIPAILVSWFMWFTS
Sbjct: 241 FTWSVKELEDMINCFDSDGDAKMTTNVRRRMDIGRMEEDGNIDYCDIPAILVSWFMWFTS 300

Query: 301 ISVNMKSITSQSPSSTLAAGPPTSDPAAGDELEKFSSLARAPITSRDAQVSSWSFDERTS 360
           ISVNMKSITSQSPSSTLAAGPPTSDPAAGDELEKFSSLARAPITSRDAQVSSWSFDERTS
Sbjct: 301 ISVNMKSITSQSPSSTLAAGPPTSDPAAGDELEKFSSLARAPITSRDAQVSSWSFDERTS 360

Query: 361 TDFSSQTKALDSGWALYEFTKCINSDSNYWKFFVYRFGLLDSSLRLTLGNFDMILNGCTT 420
           TDFSSQTKALDSGWALYEFTKCINSDSNYWKFFVYRFGLLDSSLRLTLGNFDMILNGCTT
Sbjct: 361 TDFSSQTKALDSGWALYEFTKCINSDSNYWKFFVYRFGLLDSSLRLTLGNFDMILNGCTT 420

Query: 421 PTGFFFSNSRLSIPNRSAISRSPDCSMHAAASIRSSREPHLEHQTCRYRGVFPLKLGAGS 480
           PTGFFFSNSRLSIPNRSAISRSPDCSMHAAASIRSSREPHLEHQTCRYRGVFPLKLGAGS
Sbjct: 421 PTGFFFSNSRLSIPNRSAISRSPDCSMHAAASIRSSREPHLEHQTCRYRGVFPLKLGAGS 480

Query: 481 SHFLSGDLGGLLHTIPRLPRKRNVGMTPRAAKDIPTSYRFPPMTTKPKWWWRTLACLPYL 540
           SHFLSGDLGGLLHTIPRLPRKRNVGMTPRAAKDIPTSYRFPPMTTKPKWWWRTLACLPYL
Sbjct: 481 SHFLSGDLGGLLHTIPRLPRKRNVGMTPRAAKDIPTSYRFPPMTTKPKWWWRTLACLPYL 540

Query: 541 MPFHETWMYSETAYHLHPFLEDFEFLTYPFLEALGQLPTWFLIAYFFIAYLGIVRRKEWP 600
           MPFHETWMYSETAYHLHPFLEDFEFLTYPFLEALGQLPTWFLIAYFFIAYLGIVRRKEWP
Sbjct: 541 MPFHETWMYSETAYHLHPFLEDFEFLTYPFLEALGQLPTWFLIAYFFIAYLGIVRRKEWP 600

Query: 601 HFFRFHVVMGMLLEIALQVIGTVSRWMPLAVYWGKVGMHFWTAVSFAYLFTVLEAVRCAL 660
           HFFRFHVVMGMLLEIALQVIGTVSRWMPLAVYWGKVGMHFWTAVSFAYLFTVLEAVRCAL
Sbjct: 601 HFFRFHVVMGMLLEIALQVIGTVSRWMPLAVYWGKVGMHFWTAVSFAYLFTVLEAVRCAL 660

Query: 661 AGMYADIPFFCDAAYIQIPYD 681
           AGMYADIPFFCDAAYIQIPYD
Sbjct: 661 AGMYADIPFFCDAAYIQIPYD 681

[Close]

BLAST of Csor.00g230340 vs. NCBI nr
Match: XP_023548580.1 (protein TIC 20-I, chloroplastic-like [Cucurbita pepo subsp. pepo] >XP_023548581.1 protein TIC 20-I, chloroplastic-like [Cucurbita pepo subsp. pepo] >XP_023548582.1 protein TIC 20-I, chloroplastic-like [Cucurbita pepo subsp. pepo] >XP_023548584.1 protein TIC 20-I, chloroplastic-like [Cucurbita pepo subsp. pepo] >KAG7013802.1 Protein TIC 20-I, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 564 bits (1453), Expect = 2.11e-196
Identity = 269/269 (100.00%), Postives = 269/269 (100.00%), Query Frame = 0


Query: 413 MILNGCTTPTGFFFSNSRLSIPNRSAISRSPDCSMHAAASIRSSREPHLEHQTCRYRGVF 472
           MILNGCTTPTGFFFSNSRLSIPNRSAISRSPDCSMHAAASIRSSREPHLEHQTCRYRGVF
Sbjct: 1   MILNGCTTPTGFFFSNSRLSIPNRSAISRSPDCSMHAAASIRSSREPHLEHQTCRYRGVF 60

Query: 473 PLKLGAGSSHFLSGDLGGLLHTIPRLPRKRNVGMTPRAAKDIPTSYRFPPMTTKPKWWWR 532
           PLKLGAGSSHFLSGDLGGLLHTIPRLPRKRNVGMTPRAAKDIPTSYRFPPMTTKPKWWWR
Sbjct: 61  PLKLGAGSSHFLSGDLGGLLHTIPRLPRKRNVGMTPRAAKDIPTSYRFPPMTTKPKWWWR 120

Query: 533 TLACLPYLMPFHETWMYSETAYHLHPFLEDFEFLTYPFLEALGQLPTWFLIAYFFIAYLG 592
           TLACLPYLMPFHETWMYSETAYHLHPFLEDFEFLTYPFLEALGQLPTWFLIAYFFIAYLG
Sbjct: 121 TLACLPYLMPFHETWMYSETAYHLHPFLEDFEFLTYPFLEALGQLPTWFLIAYFFIAYLG 180

Query: 593 IVRRKEWPHFFRFHVVMGMLLEIALQVIGTVSRWMPLAVYWGKVGMHFWTAVSFAYLFTV 652
           IVRRKEWPHFFRFHVVMGMLLEIALQVIGTVSRWMPLAVYWGKVGMHFWTAVSFAYLFTV
Sbjct: 181 IVRRKEWPHFFRFHVVMGMLLEIALQVIGTVSRWMPLAVYWGKVGMHFWTAVSFAYLFTV 240

Query: 653 LEAVRCALAGMYADIPFFCDAAYIQIPYD 681
           LEAVRCALAGMYADIPFFCDAAYIQIPYD
Sbjct: 241 LEAVRCALAGMYADIPFFCDAAYIQIPYD 269

[Close]

BLAST of Csor.00g230340 vs. NCBI nr
Match: XP_023006630.1 (protein TIC 20-I, chloroplastic-like [Cucurbita maxima] >XP_023006631.1 protein TIC 20-I, chloroplastic-like [Cucurbita maxima] >XP_023006632.1 protein TIC 20-I, chloroplastic-like [Cucurbita maxima] >XP_023006633.1 protein TIC 20-I, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 561 bits (1447), Expect = 1.72e-195
Identity = 268/269 (99.63%), Postives = 268/269 (99.63%), Query Frame = 0


Query: 413 MILNGCTTPTGFFFSNSRLSIPNRSAISRSPDCSMHAAASIRSSREPHLEHQTCRYRGVF 472
           MILNGCTTPTGFFFSNSRLSIPNRSAISRSPDCSMHAAASIRSSREPHLEHQTCRYRGVF
Sbjct: 1   MILNGCTTPTGFFFSNSRLSIPNRSAISRSPDCSMHAAASIRSSREPHLEHQTCRYRGVF 60

Query: 473 PLKLGAGSSHFLSGDLGGLLHTIPRLPRKRNVGMTPRAAKDIPTSYRFPPMTTKPKWWWR 532
           PLKLGAGSSH LSGDLGGLLHTIPRLPRKRNVGMTPRAAKDIPTSYRFPPMTTKPKWWWR
Sbjct: 61  PLKLGAGSSHLLSGDLGGLLHTIPRLPRKRNVGMTPRAAKDIPTSYRFPPMTTKPKWWWR 120

Query: 533 TLACLPYLMPFHETWMYSETAYHLHPFLEDFEFLTYPFLEALGQLPTWFLIAYFFIAYLG 592
           TLACLPYLMPFHETWMYSETAYHLHPFLEDFEFLTYPFLEALGQLPTWFLIAYFFIAYLG
Sbjct: 121 TLACLPYLMPFHETWMYSETAYHLHPFLEDFEFLTYPFLEALGQLPTWFLIAYFFIAYLG 180

Query: 593 IVRRKEWPHFFRFHVVMGMLLEIALQVIGTVSRWMPLAVYWGKVGMHFWTAVSFAYLFTV 652
           IVRRKEWPHFFRFHVVMGMLLEIALQVIGTVSRWMPLAVYWGKVGMHFWTAVSFAYLFTV
Sbjct: 181 IVRRKEWPHFFRFHVVMGMLLEIALQVIGTVSRWMPLAVYWGKVGMHFWTAVSFAYLFTV 240

Query: 653 LEAVRCALAGMYADIPFFCDAAYIQIPYD 681
           LEAVRCALAGMYADIPFFCDAAYIQIPYD
Sbjct: 241 LEAVRCALAGMYADIPFFCDAAYIQIPYD 269

[Close]

BLAST of Csor.00g230340 vs. NCBI nr
Match: XP_022959308.1 (protein TIC 20-I, chloroplastic-like [Cucurbita moschata] >XP_022959309.1 protein TIC 20-I, chloroplastic-like [Cucurbita moschata] >XP_022959310.1 protein TIC 20-I, chloroplastic-like [Cucurbita moschata] >XP_022959311.1 protein TIC 20-I, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 558 bits (1439), Expect = 2.80e-194
Identity = 267/269 (99.26%), Postives = 267/269 (99.26%), Query Frame = 0


Query: 413 MILNGCTTPTGFFFSNSRLSIPNRSAISRSPDCSMHAAASIRSSREPHLEHQTCRYRGVF 472
           MILNGCTTPTGFFFSNSRLSIPNRSAISRS DCSMHAAASIRSSREPHLEHQTCRYRGVF
Sbjct: 1   MILNGCTTPTGFFFSNSRLSIPNRSAISRSSDCSMHAAASIRSSREPHLEHQTCRYRGVF 60

Query: 473 PLKLGAGSSHFLSGDLGGLLHTIPRLPRKRNVGMTPRAAKDIPTSYRFPPMTTKPKWWWR 532
           PLKLGAGSSHFLSGDLGGLLHTIPRLPRKRNV MTPRAAKDIPTSYRFPPMTTKPKWWWR
Sbjct: 61  PLKLGAGSSHFLSGDLGGLLHTIPRLPRKRNVSMTPRAAKDIPTSYRFPPMTTKPKWWWR 120

Query: 533 TLACLPYLMPFHETWMYSETAYHLHPFLEDFEFLTYPFLEALGQLPTWFLIAYFFIAYLG 592
           TLACLPYLMPFHETWMYSETAYHLHPFLEDFEFLTYPFLEALGQLPTWFLIAYFFIAYLG
Sbjct: 121 TLACLPYLMPFHETWMYSETAYHLHPFLEDFEFLTYPFLEALGQLPTWFLIAYFFIAYLG 180

Query: 593 IVRRKEWPHFFRFHVVMGMLLEIALQVIGTVSRWMPLAVYWGKVGMHFWTAVSFAYLFTV 652
           IVRRKEWPHFFRFHVVMGMLLEIALQVIGTVSRWMPLAVYWGKVGMHFWTAVSFAYLFTV
Sbjct: 181 IVRRKEWPHFFRFHVVMGMLLEIALQVIGTVSRWMPLAVYWGKVGMHFWTAVSFAYLFTV 240

Query: 653 LEAVRCALAGMYADIPFFCDAAYIQIPYD 681
           LEAVRCALAGMYADIPFFCDAAYIQIPYD
Sbjct: 241 LEAVRCALAGMYADIPFFCDAAYIQIPYD 269

[Close]

BLAST of Csor.00g230340 vs. NCBI nr
Match: XP_022959490.1 (uncharacterized protein LOC111460448 isoform X1 [Cucurbita moschata])

HSP 1 Score: 523 bits (1348), Expect = 7.19e-180
Identity = 280/283 (98.94%), Postives = 280/283 (98.94%), Query Frame = 0


Query: 1   MTRTQHDTPMSDSERKEAPNSSSTDTKKTPRGSISGGDVKDTPEYEKQRLSRIAENRKRM 60
           MTRTQHDTPMSDSERKEAPNSSSTDTKKTPRGSISGGDVKDTPEYEKQRLSRIAENRKRM
Sbjct: 1   MTRTQHDTPMSDSERKEAPNSSSTDTKKTPRGSISGGDVKDTPEYEKQRLSRIAENRKRM 60

Query: 61  EALGLAKLATSFMDSSKTLRKIDRKGKRKFDEDYNPGEDSSNSEDDDSEEGDEGFGSGKV 120
           EALGLAKLATSFMDSSKTLRKIDRKGKRKFDEDYNPGE SSNSEDDDSEEGDEGFGSGKV
Sbjct: 61  EALGLAKLATSFMDSSKTLRKIDRKGKRKFDEDYNPGEGSSNSEDDDSEEGDEGFGSGKV 120

Query: 121 SRSCGMKGKNRGSKAKRKSSVEKSNNLNDEDDDALQQAIKLSLQDSGETSDAQMQGPFEN 180
           SRS GMKGKNRGSKAKRKSSVEKSNNLNDEDDDALQQAIKLSLQDSGETSDAQMQGPFEN
Sbjct: 121 SRSRGMKGKNRGSKAKRKSSVEKSNNLNDEDDDALQQAIKLSLQDSGETSDAQMQGPFEN 180

Query: 181 VRRKNVKNQEMGRGMKRKGLFTSRMQMNEDELIMNFYCFDESWKGSITVSDLKRVAAVHD 240
           VRRKNVKNQEMG GMKRKGLFTSRMQMNEDELIMNFYCFDESWKGSITVSDLKRVAAVHD
Sbjct: 181 VRRKNVKNQEMGGGMKRKGLFTSRMQMNEDELIMNFYCFDESWKGSITVSDLKRVAAVHD 240

Query: 241 FTWSVKELEDMINCFDSDGDAKMTTNVRRRMDIGRMEEDGNID 283
           FTWSVKELEDMINCFDSDGDAKMTTNVRRRMDIGRMEEDGNID
Sbjct: 241 FTWSVKELEDMINCFDSDGDAKMTTNVRRRMDIGRMEEDGNID 283

[Close]

BLAST of Csor.00g230340 vs. ExPASy TrEMBL
Match: A0A6J1KYA1 (Protein TIC 20 OS=Cucurbita maxima OX=3661 GN=LOC111499301 PE=3 SV=1)

HSP 1 Score: 561 bits (1447), Expect = 8.31e-196
Identity = 268/269 (99.63%), Postives = 268/269 (99.63%), Query Frame = 0


Query: 413 MILNGCTTPTGFFFSNSRLSIPNRSAISRSPDCSMHAAASIRSSREPHLEHQTCRYRGVF 472
           MILNGCTTPTGFFFSNSRLSIPNRSAISRSPDCSMHAAASIRSSREPHLEHQTCRYRGVF
Sbjct: 1   MILNGCTTPTGFFFSNSRLSIPNRSAISRSPDCSMHAAASIRSSREPHLEHQTCRYRGVF 60

Query: 473 PLKLGAGSSHFLSGDLGGLLHTIPRLPRKRNVGMTPRAAKDIPTSYRFPPMTTKPKWWWR 532
           PLKLGAGSSH LSGDLGGLLHTIPRLPRKRNVGMTPRAAKDIPTSYRFPPMTTKPKWWWR
Sbjct: 61  PLKLGAGSSHLLSGDLGGLLHTIPRLPRKRNVGMTPRAAKDIPTSYRFPPMTTKPKWWWR 120

Query: 533 TLACLPYLMPFHETWMYSETAYHLHPFLEDFEFLTYPFLEALGQLPTWFLIAYFFIAYLG 592
           TLACLPYLMPFHETWMYSETAYHLHPFLEDFEFLTYPFLEALGQLPTWFLIAYFFIAYLG
Sbjct: 121 TLACLPYLMPFHETWMYSETAYHLHPFLEDFEFLTYPFLEALGQLPTWFLIAYFFIAYLG 180

Query: 593 IVRRKEWPHFFRFHVVMGMLLEIALQVIGTVSRWMPLAVYWGKVGMHFWTAVSFAYLFTV 652
           IVRRKEWPHFFRFHVVMGMLLEIALQVIGTVSRWMPLAVYWGKVGMHFWTAVSFAYLFTV
Sbjct: 181 IVRRKEWPHFFRFHVVMGMLLEIALQVIGTVSRWMPLAVYWGKVGMHFWTAVSFAYLFTV 240

Query: 653 LEAVRCALAGMYADIPFFCDAAYIQIPYD 681
           LEAVRCALAGMYADIPFFCDAAYIQIPYD
Sbjct: 241 LEAVRCALAGMYADIPFFCDAAYIQIPYD 269

[Close]

BLAST of Csor.00g230340 vs. ExPASy TrEMBL
Match: A0A6J1H4H9 (Protein TIC 20 OS=Cucurbita moschata OX=3662 GN=LOC111460323 PE=3 SV=1)

HSP 1 Score: 558 bits (1439), Expect = 1.36e-194
Identity = 267/269 (99.26%), Postives = 267/269 (99.26%), Query Frame = 0


Query: 413 MILNGCTTPTGFFFSNSRLSIPNRSAISRSPDCSMHAAASIRSSREPHLEHQTCRYRGVF 472
           MILNGCTTPTGFFFSNSRLSIPNRSAISRS DCSMHAAASIRSSREPHLEHQTCRYRGVF
Sbjct: 1   MILNGCTTPTGFFFSNSRLSIPNRSAISRSSDCSMHAAASIRSSREPHLEHQTCRYRGVF 60

Query: 473 PLKLGAGSSHFLSGDLGGLLHTIPRLPRKRNVGMTPRAAKDIPTSYRFPPMTTKPKWWWR 532
           PLKLGAGSSHFLSGDLGGLLHTIPRLPRKRNV MTPRAAKDIPTSYRFPPMTTKPKWWWR
Sbjct: 61  PLKLGAGSSHFLSGDLGGLLHTIPRLPRKRNVSMTPRAAKDIPTSYRFPPMTTKPKWWWR 120

Query: 533 TLACLPYLMPFHETWMYSETAYHLHPFLEDFEFLTYPFLEALGQLPTWFLIAYFFIAYLG 592
           TLACLPYLMPFHETWMYSETAYHLHPFLEDFEFLTYPFLEALGQLPTWFLIAYFFIAYLG
Sbjct: 121 TLACLPYLMPFHETWMYSETAYHLHPFLEDFEFLTYPFLEALGQLPTWFLIAYFFIAYLG 180

Query: 593 IVRRKEWPHFFRFHVVMGMLLEIALQVIGTVSRWMPLAVYWGKVGMHFWTAVSFAYLFTV 652
           IVRRKEWPHFFRFHVVMGMLLEIALQVIGTVSRWMPLAVYWGKVGMHFWTAVSFAYLFTV
Sbjct: 181 IVRRKEWPHFFRFHVVMGMLLEIALQVIGTVSRWMPLAVYWGKVGMHFWTAVSFAYLFTV 240

Query: 653 LEAVRCALAGMYADIPFFCDAAYIQIPYD 681
           LEAVRCALAGMYADIPFFCDAAYIQIPYD
Sbjct: 241 LEAVRCALAGMYADIPFFCDAAYIQIPYD 269

[Close]

BLAST of Csor.00g230340 vs. ExPASy TrEMBL
Match: A0A6J1H6F0 (uncharacterized protein LOC111460448 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111460448 PE=4 SV=1)

HSP 1 Score: 523 bits (1348), Expect = 3.48e-180
Identity = 280/283 (98.94%), Postives = 280/283 (98.94%), Query Frame = 0


Query: 1   MTRTQHDTPMSDSERKEAPNSSSTDTKKTPRGSISGGDVKDTPEYEKQRLSRIAENRKRM 60
           MTRTQHDTPMSDSERKEAPNSSSTDTKKTPRGSISGGDVKDTPEYEKQRLSRIAENRKRM
Sbjct: 1   MTRTQHDTPMSDSERKEAPNSSSTDTKKTPRGSISGGDVKDTPEYEKQRLSRIAENRKRM 60

Query: 61  EALGLAKLATSFMDSSKTLRKIDRKGKRKFDEDYNPGEDSSNSEDDDSEEGDEGFGSGKV 120
           EALGLAKLATSFMDSSKTLRKIDRKGKRKFDEDYNPGE SSNSEDDDSEEGDEGFGSGKV
Sbjct: 61  EALGLAKLATSFMDSSKTLRKIDRKGKRKFDEDYNPGEGSSNSEDDDSEEGDEGFGSGKV 120

Query: 121 SRSCGMKGKNRGSKAKRKSSVEKSNNLNDEDDDALQQAIKLSLQDSGETSDAQMQGPFEN 180
           SRS GMKGKNRGSKAKRKSSVEKSNNLNDEDDDALQQAIKLSLQDSGETSDAQMQGPFEN
Sbjct: 121 SRSRGMKGKNRGSKAKRKSSVEKSNNLNDEDDDALQQAIKLSLQDSGETSDAQMQGPFEN 180

Query: 181 VRRKNVKNQEMGRGMKRKGLFTSRMQMNEDELIMNFYCFDESWKGSITVSDLKRVAAVHD 240
           VRRKNVKNQEMG GMKRKGLFTSRMQMNEDELIMNFYCFDESWKGSITVSDLKRVAAVHD
Sbjct: 181 VRRKNVKNQEMGGGMKRKGLFTSRMQMNEDELIMNFYCFDESWKGSITVSDLKRVAAVHD 240

Query: 241 FTWSVKELEDMINCFDSDGDAKMTTNVRRRMDIGRMEEDGNID 283
           FTWSVKELEDMINCFDSDGDAKMTTNVRRRMDIGRMEEDGNID
Sbjct: 241 FTWSVKELEDMINCFDSDGDAKMTTNVRRRMDIGRMEEDGNID 283

[Close]

BLAST of Csor.00g230340 vs. ExPASy TrEMBL
Match: A0A6J1L0M5 (uncharacterized protein LOC111499295 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111499295 PE=4 SV=1)

HSP 1 Score: 499 bits (1285), Expect = 1.37e-170
Identity = 272/296 (91.89%), Postives = 276/296 (93.24%), Query Frame = 0


Query: 1   MTRTQHDTPMSDSERKEAPNSSSTDTKKTPRGSISGGDVKDTPEYEKQRLSRIAENRKRM 60
           MTR Q DTPMSDSERKEAPNSS  DTKKTPRGS+SGGDVKDTPEYEKQRLSRIAENRKRM
Sbjct: 1   MTRAQRDTPMSDSERKEAPNSSIIDTKKTPRGSMSGGDVKDTPEYEKQRLSRIAENRKRM 60

Query: 61  EALGLAKLATSFMDSSKTLRKIDRKGKRKFDEDYNPGEDSSNSEDDDSEEGDEGFGSGKV 120
           EALGLAKLATSFMDSSKTLRKIDRKGK KFDEDYNPGEDSSNSEDDDSEEGDEGFGSGKV
Sbjct: 61  EALGLAKLATSFMDSSKTLRKIDRKGKHKFDEDYNPGEDSSNSEDDDSEEGDEGFGSGKV 120

Query: 121 SRSCGMKGKNRGSKAKRKSSVEKSNNLNDEDDDALQQAIKLSLQDSGETSDAQMQGPFEN 180
           SRS GMKGKNRGSK KRKSSVEKSNNLNDEDDDALQQAIKLSLQ+SGETSDAQMQGPFEN
Sbjct: 121 SRSRGMKGKNRGSKEKRKSSVEKSNNLNDEDDDALQQAIKLSLQESGETSDAQMQGPFEN 180

Query: 181 VRRKNVKNQEMGRGMKRKGLFTSRMQMNEDELIMNFYCFDESWKGSITVSDLKRVAAVHD 240
           VRRKNVKNQEMG GMKRKGLFTSRMQMNEDELIMNFYCFDESWKGSITV DLKRVAAVHD
Sbjct: 181 VRRKNVKNQEMGGGMKRKGLFTSRMQMNEDELIMNFYCFDESWKGSITVRDLKRVAAVHD 240

Query: 241 FTWSVKELEDMINCFDSDGDAKMTT----NVRRRMDIGRMEEDGNIDYCDIPAILV 292
           FTWSVKELEDMINCFDSDGDAKMTT    NVRRRMDIGRM +DGNID C  P   +
Sbjct: 241 FTWSVKELEDMINCFDSDGDAKMTTHWWTNVRRRMDIGRMNKDGNID-CLSPCFFL 295

[Close]

BLAST of Csor.00g230340 vs. ExPASy TrEMBL
Match: A0A6J1H502 (caltractin-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111460448 PE=4 SV=1)

HSP 1 Score: 485 bits (1248), Expect = 1.88e-165
Identity = 261/271 (96.31%), Postives = 265/271 (97.79%), Query Frame = 0


Query: 1   MTRTQHDTPMSDSERKEAPNSSSTDTKKTPRGSISGGDVKDTPEYEKQRLSRIAENRKRM 60
           MTRTQHDTPMSDSERKEAPNSSSTDTKKTPRGSISGGDVKDTPEYEKQRLSRIAENRKRM
Sbjct: 1   MTRTQHDTPMSDSERKEAPNSSSTDTKKTPRGSISGGDVKDTPEYEKQRLSRIAENRKRM 60

Query: 61  EALGLAKLATSFMDSSKTLRKIDRKGKRKFDEDYNPGEDSSNSEDDDSEEGDEGFGSGKV 120
           EALGLAKLATSFMDSSKTLRKIDRKGKRKFDEDYNPGE SSNSEDDDSEEGDEGFGSGKV
Sbjct: 61  EALGLAKLATSFMDSSKTLRKIDRKGKRKFDEDYNPGEGSSNSEDDDSEEGDEGFGSGKV 120

Query: 121 SRSCGMKGKNRGSKAKRKSSVEKSNNLNDEDDDALQQAIKLSLQDSGETSDAQMQGPFEN 180
           SRS GMKGKNRGSKAKRKSSVEKSNNLNDEDDDALQQAIKLSLQDSGETSDAQMQGPFEN
Sbjct: 121 SRSRGMKGKNRGSKAKRKSSVEKSNNLNDEDDDALQQAIKLSLQDSGETSDAQMQGPFEN 180

Query: 181 VRRKNVKNQEMGRGMKRKGLFTSRMQMNEDELIMNFYCFDESWKGSITVSDLKRVAAVHD 240
           VRRKNVKNQEMG GMKRKGLFTSRMQMNEDELIMNFYCFDESWKGSITVSDLKRVAAVHD
Sbjct: 181 VRRKNVKNQEMGGGMKRKGLFTSRMQMNEDELIMNFYCFDESWKGSITVSDLKRVAAVHD 240

Query: 241 FTWSVKELEDMINCFDSDGDAKMTTNVRRRM 271
           FTWSVKELEDMINCFDSDGDAK++ +  RR+
Sbjct: 241 FTWSVKELEDMINCFDSDGDAKLSMDDFRRI 271

[Close]

BLAST of Csor.00g230340 vs. TAIR 10
Match: AT1G04940.1 (translocon at the inner envelope membrane of chloroplasts 20 )

HSP 1 Score: 366.7 bits (940), Expect = 4.1e-101
Identity = 170/213 (79.81%), Postives = 190/213 (89.20%), Query Frame = 0


Query: 469 RGVFPLKLGAGSSHFLSGDLGGLLHTIPRLPRKRNVGMTPRAAKDIPTSYRFPPMTTKPK 528
           RGV    L A SS  L+G+ G L  T+P LP +R   +TPRA+KD+P+S+RFPPMT KP+
Sbjct: 62  RGVPLSYLSASSSLLLNGEQGSLSGTLPVLPVRRKTLLTPRASKDVPSSFRFPPMTKKPQ 121

Query: 529 WWWRTLACLPYLMPFHETWMYSETAYHLHPFLEDFEFLTYPFLEALGQLPTWFLIAYFFI 588
           WWWRTLACLPYLMP HETWMY+ETAYHLHPFLEDFEFLTYPFL A+G+LP+WFL+AYFF+
Sbjct: 122 WWWRTLACLPYLMPLHETWMYAETAYHLHPFLEDFEFLTYPFLGAIGRLPSWFLMAYFFV 181

Query: 589 AYLGIVRRKEWPHFFRFHVVMGMLLEIALQVIGTVSRWMPLAVYWGKVGMHFWTAVSFAY 648
           AYLGIVRRKEWPHFFRFHVVMGMLLEIALQVIGTVS+WMPL VYWGK GMHFWTAV+FAY
Sbjct: 182 AYLGIVRRKEWPHFFRFHVVMGMLLEIALQVIGTVSKWMPLGVYWGKFGMHFWTAVAFAY 241

Query: 649 LFTVLEAVRCALAGMYADIPFFCDAAYIQIPYD 682
           LFTVLE++RCALAGMYADIPF CDAAYIQIPYD
Sbjct: 242 LFTVLESIRCALAGMYADIPFVCDAAYIQIPYD 274

[Close]

BLAST of Csor.00g230340 vs. TAIR 10
Match: AT1G04945.3 (HIT-type Zinc finger family protein )

HSP 1 Score: 326.2 bits (835), Expect = 6.1e-89
Identity = 151/193 (78.24%), Postives = 171/193 (88.60%), Query Frame = 0


Query: 469 RGVFPLKLGAGSSHFLSGDLGGLLHTIPRLPRKRNVGMTPRAAKDIPTSYRFPPMTTKPK 528
           RGV    L A SS  L+G+ G L  T+P LP +R   +TPRA+KD+P+S+RFPPMT KP+
Sbjct: 62  RGVPLSYLSASSSLLLNGEQGSLSGTLPVLPVRRKTLLTPRASKDVPSSFRFPPMTKKPQ 121

Query: 529 WWWRTLACLPYLMPFHETWMYSETAYHLHPFLEDFEFLTYPFLEALGQLPTWFLIAYFFI 588
           WWWRTLACLPYLMP HETWMY+ETAYHLHPFLEDFEFLTYPFL A+G+LP+WFL+AYFF+
Sbjct: 122 WWWRTLACLPYLMPLHETWMYAETAYHLHPFLEDFEFLTYPFLGAIGRLPSWFLMAYFFV 181

Query: 589 AYLGIVRRKEWPHFFRFHVVMGMLLEIALQVIGTVSRWMPLAVYWGKVGMHFWTAVSFAY 648
           AYLGIVRRKEWPHFFRFHVVMGMLLEIALQVIGTVS+WMPL VYWGK GMHFWTAV+FAY
Sbjct: 182 AYLGIVRRKEWPHFFRFHVVMGMLLEIALQVIGTVSKWMPLGVYWGKFGMHFWTAVAFAY 241

Query: 649 LFTVLEAVRCALA 662
           LFTVLE++RCALA
Sbjct: 242 LFTVLESIRCALA 254

[Close]

BLAST of Csor.00g230340 vs. TAIR 10
Match: AT4G03320.1 (translocon at the inner envelope membrane of chloroplasts 20-IV )

HSP 1 Score: 158.3 bits (399), Expect = 2.2e-38
Identity = 98/260 (37.69%), Postives = 141/260 (54.23%), Query Frame = 0


Query: 420 TPTGFFFSNSRLSIPNRSAISRSPDCSMHAAASIRSSREPHLEHQTCRYRGVFPLKLGAG 479
           +P    F N R+  PN  + ++     +  +AS  S R P  E               A 
Sbjct: 23  SPISKKFVNPRVFFPNVDSSAK-----LRLSASSISRRCPR-EIAPLSATASVDFAAAAT 82

Query: 480 SSHFLSGDLGGLLHTIPRLPRKRNVGMTPRAAKDIPTSYRFPPMTTKPKWWWRTLACLPY 539
           SS+ L  +  GL    P L R R      R AKD     + P +  +P+WWWRTLAC+PY
Sbjct: 83  SSNQLFAN--GLPPLAPGLRRHRRPIEPARVAKDDFFKIKLPKIAERPEWWWRTLACVPY 142

Query: 540 LMPFHETWMYSETAYHLHPFLEDFEF---LTYPFLEALGQLPTWFLIAYFFIAYLGIVRR 599
           L+    +   S+  +++ PFLE  +    + Y    A+ + PTWF + Y ++ Y+ +V+ 
Sbjct: 143 LI----SLQISDVGFYVQPFLEKHDAIGDMIYFIPGAINRWPTWFFMVYCYLGYMWVVKN 202

Query: 600 KEWPHFFRFHVVMGMLLEIALQVIGTVSRWMPLAVYWGKVGMHFWTAVSFAYLFTVLEAV 659
           KE PH+ RFH++MGMLLE ALQVI   S + PL  + G+ GM++W A+ F Y+  +LE +
Sbjct: 203 KELPHYLRFHMMMGMLLETALQVIWCTSNFFPLIHFKGRFGMYYWMAIGFTYICLLLECI 262

Query: 660 RCALAGMYADIPFFCDAAYI 677
           RCALAG+YA IPF  DAA I
Sbjct: 263 RCALAGVYAQIPFMTDAASI 270

[Close]

BLAST of Csor.00g230340 vs. TAIR 10
Match: AT1G73440.1 (calmodulin-related )

HSP 1 Score: 127.9 bits (320), Expect = 3.2e-29
Identity = 106/279 (37.99%), Postives = 154/279 (55.20%), Query Frame = 0


Query: 1   MTRTQHDTPMSDSERKEAPNSSSTDTKKTPRGSISGGDVKDTPEYEKQRLSRIAENRKRM 60
           M R + +   S SER+ + +SS  +++ T +G+IS        +YEKQRLSRIAEN+ R+
Sbjct: 1   MARGESEGESSGSERESSSSSSGNESEPT-KGTIS--------KYEKQRLSRIAENKARL 60

Query: 61  EALGLAKLATSFMDSSKTLRKIDRKGKR---KFDEDYNP--GEDSSNSEDDDSEEGDEGF 120
           +ALG++K A + +  S   +K  R+ KR   + D+DY P   +   + +DD+ EE DE  
Sbjct: 61  DALGISKAAKALLSPSPVSKK--RRVKRNSGEEDDDYTPVIADGDGDEDDDEVEEIDE-- 120

Query: 121 GSGKVSRSCGMKGKNRGSKAKRKSSVEKSNNLN---DEDDDALQQAIKLSLQDSGETSDA 180
                      K KN+ S +KRK S  K  N +    EDDD L +AI LSLQ S   SD 
Sbjct: 121 -----DEEFLCKRKNKSSASKRKVSSRKILNTSVSLGEDDDDLDKAIALSLQGSVAGSD- 180

Query: 181 QMQGPFENVRRKNVKNQEMGRGMKRKGLFTSRMQMNEDELIMNFYCFDESWKGSITVSDL 240
                           +E     K++    S+ QM +DEL+M F  FDE  KG IT+ D+
Sbjct: 181 ----------------KEAATMKKKRPELMSKTQMTQDELVMYFCQFDEGGKGFITLRDV 240

Query: 241 KRVAAVHDFTWSVKELEDMINCFDSDGDAKMTTNVRRRM 272
            ++A VHDFTW+ +EL+DMI CFD D D K++ +  R++
Sbjct: 241 AKMATVHDFTWTEEELQDMIRCFDMDKDGKLSLDEFRKI 244

The following BLAST results are available for this feature:

BLAST of Csor.00g230340 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GZ79	5.7e-100	79.81	Protein TIC 20-I, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TIC20-I PE=1 ...	[more]
Q9ZST8	5.0e-80	62.23	Protein TIC 20, chloroplastic OS=Pisum sativum OX=3888 GN=TIC20 PE=1 SV=1	[more]
Q9ZQZ9	3.1e-37	37.69	Protein TIC 20-IV, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TIC20-IV PE=...	[more]
P73387	4.5e-04	26.28	Tic20 family protein OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 ...	[more]

BLAST of Csor.00g230340 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6575237.1	0.0	100.00	Protein TIC 20-I, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023548580.1	2.11e-196	100.00	protein TIC 20-I, chloroplastic-like [Cucurbita pepo subsp. pepo] >XP_023548581....	[more]
XP_023006630.1	1.72e-195	99.63	protein TIC 20-I, chloroplastic-like [Cucurbita maxima] >XP_023006631.1 protein ...	[more]
XP_022959308.1	2.80e-194	99.26	protein TIC 20-I, chloroplastic-like [Cucurbita moschata] >XP_022959309.1 protei...	[more]
XP_022959490.1	7.19e-180	98.94	uncharacterized protein LOC111460448 isoform X1 [Cucurbita moschata]	[more]

BLAST of Csor.00g230340 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KYA1	8.31e-196	99.63	Protein TIC 20 OS=Cucurbita maxima OX=3661 GN=LOC111499301 PE=3 SV=1	[more]
A0A6J1H4H9	1.36e-194	99.26	Protein TIC 20 OS=Cucurbita moschata OX=3662 GN=LOC111460323 PE=3 SV=1	[more]
A0A6J1H6F0	3.48e-180	98.94	uncharacterized protein LOC111460448 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1L0M5	1.37e-170	91.89	uncharacterized protein LOC111499295 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1H502	1.88e-165	96.31	caltractin-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111460448 PE=4 SV...	[more]

BLAST of Csor.00g230340 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G04940.1	4.1e-101	79.81	translocon at the inner envelope membrane of chloroplasts 20	[more]
AT1G04945.3	6.1e-89	78.24	HIT-type Zinc finger family protein	[more]
AT4G03320.1	2.2e-38	37.69	translocon at the inner envelope membrane of chloroplasts 20-IV	[more]
AT1G73440.1	3.2e-29	37.99	calmodulin-related	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005691	Chloroplast protein import component Tic20	TIGRFAM	TIGR00994	TIGR00994	coord: 413..681 e-value: 1.4E-118 score: 393.5
IPR005691	Chloroplast protein import component Tic20	PFAM	PF16166	TIC20	coord: 502..674 e-value: 1.1E-67 score: 227.3
IPR005691	Chloroplast protein import component Tic20	PANTHER	PTHR33510	PROTEIN TIC 20-II, CHLOROPLASTIC	coord: 437..681
None	No IPR available	GENE3D	1.10.238.10		coord: 194..285 e-value: 1.0E-6 score: 30.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 97..112
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 40..62
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 135..151
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..151
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 164..194
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 77..96
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..22
None	No IPR available	PANTHER	PTHR33510:SF14	SUBFAMILY NOT NAMED	coord: 437..681
IPR003903	Ubiquitin interacting motif	PROSITE	PS50330	UIM	coord: 150..169 score: 9.456464
IPR011992	EF-hand domain pair	SUPERFAMILY	47473	EF-hand	coord: 202..264

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g230340.m01	Csor.00g230340.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0009706	chloroplast inner membrane
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005509	calcium ion binding