Csor.00g274960 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSsinglestart_codonpolypeptidestop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGATGGTCAATCCTCGACAAGACGAGCGAGCCGGAGCAGAAATTGCCTATGGACCCGAAGAATGCTACCGACAATCGGTGGAGCTGTTAAAGGAACTAGGGTTCCCGAGCGGCGTGATGCCGTTGCAGGAGCTCGAGGAATGTGGGATTGTGAAGGAGACGGGGTTCATTTGGATGAAACAAAAGAAGCCCTACGAGCATTTCTTCGAGACGACGAACTCGAGGGTTGTGTACGCAACGGAGGTGACTGCGTACGTGGAAAAGTTGAAGATGAAGAAGATGACGGGGGTGAAGACGAAGCAGCTACTTTTGTGGGTTCCGATTTCGGAGATGAGTATTGATGATCCTAAGGGGAAGAAGATTTGCTTTAAAACTCCAATGGGGATTGGAAAATCTTATCCTGTTACTGCGTTCATGGTGGATGAAGAGAAGAACAAGTATTTGGAGAAGGTTGAGGAATGA ATGGCGATGGTCAATCCTCGACAAGACGAGCGAGCCGGAGCAGAAATTGCCTATGGACCCGAAGAATGCTACCGACAATCGGTGGAGCTGTTAAAGGAACTAGGGTTCCCGAGCGGCGTGATGCCGTTGCAGGAGCTCGAGGAATGTGGGATTGTGAAGGAGACGGGGTTCATTTGGATGAAACAAAAGAAGCCCTACGAGCATTTCTTCGAGACGACGAACTCGAGGGTTGTGTACGCAACGGAGGTGACTGCGTACGTGGAAAAGTTGAAGATGAAGAAGATGACGGGGGTGAAGACGAAGCAGCTACTTTTGTGGGTTCCGATTTCGGAGATGAGTATTGATGATCCTAAGGGGAAGAAGATTTGCTTTAAAACTCCAATGGGGATTGGAAAATCTTATCCTGTTACTGCGTTCATGGTGGATGAAGAGAAGAACAAGTATTTGGAGAAGGTTGAGGAATGA ATGGCGATGGTCAATCCTCGACAAGACGAGCGAGCCGGAGCAGAAATTGCCTATGGACCCGAAGAATGCTACCGACAATCGGTGGAGCTGTTAAAGGAACTAGGGTTCCCGAGCGGCGTGATGCCGTTGCAGGAGCTCGAGGAATGTGGGATTGTGAAGGAGACGGGGTTCATTTGGATGAAACAAAAGAAGCCCTACGAGCATTTCTTCGAGACGACGAACTCGAGGGTTGTGTACGCAACGGAGGTGACTGCGTACGTGGAAAAGTTGAAGATGAAGAAGATGACGGGGGTGAAGACGAAGCAGCTACTTTTGTGGGTTCCGATTTCGGAGATGAGTATTGATGATCCTAAGGGGAAGAAGATTTGCTTTAAAACTCCAATGGGGATTGGAAAATCTTATCCTGTTACTGCGTTCATGGTGGATGAAGAGAAGAACAAGTATTTGGAGAAGGTTGAGGAATGA MAMVNPRQDERAGAEIAYGPEECYRQSVELLKELGFPSGVMPLQELEECGIVKETGFIWMKQKKPYEHFFETTNSRVVYATEVTAYVEKLKMKKMTGVKTKQLLLWVPISEMSIDDPKGKKICFKTPMGIGKSYPVTAFMVDEEKNKYLEKVEE Homology
BLAST of Csor.00g274960 vs. NCBI nr
Match: XP_022928854.1 (uncharacterized protein LOC111435645 [Cucurbita moschata] >KAG6579583.1 hypothetical protein SDJN03_24031, partial [Cucurbita argyrosperma subsp. sororia] >KAG7017042.1 hypothetical protein SDJN02_22154, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 313 bits (803), Expect = 8.01e-108 Identity = 154/154 (100.00%), Postives = 154/154 (100.00%), Query Frame = 0
BLAST of Csor.00g274960 vs. NCBI nr
Match: XP_023520533.1 (uncharacterized protein LOC111783942 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 310 bits (795), Expect = 1.33e-106 Identity = 152/154 (98.70%), Postives = 153/154 (99.35%), Query Frame = 0
BLAST of Csor.00g274960 vs. NCBI nr
Match: XP_022970114.1 (uncharacterized protein LOC111469104 [Cucurbita maxima]) HSP 1 Score: 307 bits (787), Expect = 2.21e-105 Identity = 150/154 (97.40%), Postives = 152/154 (98.70%), Query Frame = 0
BLAST of Csor.00g274960 vs. NCBI nr
Match: XP_004143841.2 (uncharacterized protein LOC101223048 [Cucumis sativus] >KGN49983.1 hypothetical protein Csa_000683 [Cucumis sativus]) HSP 1 Score: 273 bits (699), Expect = 5.80e-92 Identity = 133/154 (86.36%), Postives = 143/154 (92.86%), Query Frame = 0
BLAST of Csor.00g274960 vs. NCBI nr
Match: XP_022159702.1 (uncharacterized protein LOC111026045 [Momordica charantia]) HSP 1 Score: 271 bits (694), Expect = 3.47e-91 Identity = 131/154 (85.06%), Postives = 143/154 (92.86%), Query Frame = 0
BLAST of Csor.00g274960 vs. ExPASy TrEMBL
Match: A0A6J1EM22 (uncharacterized protein LOC111435645 OS=Cucurbita moschata OX=3662 GN=LOC111435645 PE=4 SV=1) HSP 1 Score: 313 bits (803), Expect = 3.88e-108 Identity = 154/154 (100.00%), Postives = 154/154 (100.00%), Query Frame = 0
BLAST of Csor.00g274960 vs. ExPASy TrEMBL
Match: A0A6J1I4K3 (uncharacterized protein LOC111469104 OS=Cucurbita maxima OX=3661 GN=LOC111469104 PE=4 SV=1) HSP 1 Score: 307 bits (787), Expect = 1.07e-105 Identity = 150/154 (97.40%), Postives = 152/154 (98.70%), Query Frame = 0
BLAST of Csor.00g274960 vs. ExPASy TrEMBL
Match: A0A0A0KK90 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G148540 PE=4 SV=1) HSP 1 Score: 273 bits (699), Expect = 2.81e-92 Identity = 133/154 (86.36%), Postives = 143/154 (92.86%), Query Frame = 0
BLAST of Csor.00g274960 vs. ExPASy TrEMBL
Match: A0A6J1E0J2 (uncharacterized protein LOC111026045 OS=Momordica charantia OX=3673 GN=LOC111026045 PE=4 SV=1) HSP 1 Score: 271 bits (694), Expect = 1.68e-91 Identity = 131/154 (85.06%), Postives = 143/154 (92.86%), Query Frame = 0
BLAST of Csor.00g274960 vs. ExPASy TrEMBL
Match: A0A5D3C293 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G001520 PE=4 SV=1) HSP 1 Score: 269 bits (688), Expect = 1.33e-90 Identity = 129/154 (83.77%), Postives = 142/154 (92.21%), Query Frame = 0
BLAST of Csor.00g274960 vs. TAIR 10
Match: AT4G24130.1 (Protein of unknown function, DUF538 ) HSP 1 Score: 211.5 bits (537), Expect = 4.9e-55 Identity = 101/142 (71.13%), Postives = 118/142 (83.10%), Query Frame = 0
BLAST of Csor.00g274960 vs. TAIR 10
Match: AT1G56580.1 (Protein of unknown function, DUF538 ) HSP 1 Score: 132.5 bits (332), Expect = 2.9e-31 Identity = 66/142 (46.48%), Postives = 95/142 (66.90%), Query Frame = 0
BLAST of Csor.00g274960 vs. TAIR 10
Match: AT1G09310.1 (Protein of unknown function, DUF538 ) HSP 1 Score: 128.6 bits (322), Expect = 4.2e-30 Identity = 67/147 (45.58%), Postives = 97/147 (65.99%), Query Frame = 0
BLAST of Csor.00g274960 vs. TAIR 10
Match: AT5G46230.1 (Protein of unknown function, DUF538 ) HSP 1 Score: 120.6 bits (301), Expect = 1.1e-27 Identity = 54/143 (37.76%), Postives = 88/143 (61.54%), Query Frame = 0
BLAST of Csor.00g274960 vs. TAIR 10
Match: AT5G49600.1 (Protein of unknown function, DUF538 ) HSP 1 Score: 100.9 bits (250), Expect = 9.4e-22 Identity = 51/138 (36.96%), Postives = 84/138 (60.87%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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