Csor.00g238590 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g238590
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
LocationCsor_Chr10: 6227624 .. 6227935 (-)
RNA-Seq ExpressionCsor.00g238590
SyntenyCsor.00g238590
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSsinglepolypeptidestart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACTCTTTTAGCTCTAATGGCGTGCATTCGAACCCAAGGGCACATGGTTTTCCTTCCAATTATGTCGTAGTGTCCTATGGCGTAATCGGAAGGGTGGAAGGTCACAGGTTAAATGGAGGCAGTTCGGGTCGGTCGGTTGCGGATCTTGGATCAGGTCACCAGCGGATCCGCGCTCGCAAACCGTATGCTGACACATGTGGCGTAGTGCCTCACCTGTTAGCTGACTTGCGTCTTCATCAATACTCAACTATCAAGTTTATTGATTGTATTGCTGGAATAGCTCAATTGGTTAGAGTGTGTGGCCGTTAA

mRNA sequence

ATGGACTCTTTTAGCTCTAATGGCGTGCATTCGAACCCAAGGGCACATGGTTTTCCTTCCAATTATGTCGTAGTGTCCTATGGCGTAATCGGAAGGGTGGAAGGTCACAGGTTAAATGGAGGCAGTTCGGGTCGGTCGGTTGCGGATCTTGGATCAGGTCACCAGCGGATCCGCGCTCGCAAACCGTATGCTGACACATGTGGCGTAGTGCCTCACCTGTTAGCTGACTTGCGTCTTCATCAATACTCAACTATCAAGTTTATTGATTGTATTGCTGGAATAGCTCAATTGGTTAGAGTGTGTGGCCGTTAA

Coding sequence (CDS)

ATGGACTCTTTTAGCTCTAATGGCGTGCATTCGAACCCAAGGGCACATGGTTTTCCTTCCAATTATGTCGTAGTGTCCTATGGCGTAATCGGAAGGGTGGAAGGTCACAGGTTAAATGGAGGCAGTTCGGGTCGGTCGGTTGCGGATCTTGGATCAGGTCACCAGCGGATCCGCGCTCGCAAACCGTATGCTGACACATGTGGCGTAGTGCCTCACCTGTTAGCTGACTTGCGTCTTCATCAATACTCAACTATCAAGTTTATTGATTGTATTGCTGGAATAGCTCAATTGGTTAGAGTGTGTGGCCGTTAA

Protein sequence

MDSFSSNGVHSNPRAHGFPSNYVVVSYGVIGRVEGHRLNGGSSGRSVADLGSGHQRIRARKPYADTCGVVPHLLADLRLHQYSTIKFIDCIAGIAQLVRVCGR
Homology
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BLAST of Csor.00g238590 vs. NCBI nr
Match: KAG6590323.1 (hypothetical protein SDJN03_15746, partial [Cucurbita argyrosperma subsp. sororia] >KAG6590343.1 hypothetical protein SDJN03_15766, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 214 bits (544), Expect = 5.75e-70
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0 

Query: 1   MDSFSSNGVHSNPRAHGFPSNYVVVSYGVIGRVEGHRLNGGSSGRSVADLGSGHQRIRAR 60
           MDSFSSNGVHSNPRAHGFPSNYVVVSYGVIGRVEGHRLNGGSSGRSVADLGSGHQRIRAR
Sbjct: 1   MDSFSSNGVHSNPRAHGFPSNYVVVSYGVIGRVEGHRLNGGSSGRSVADLGSGHQRIRAR 60

Query: 61  KPYADTCGVVPHLLADLRLHQYSTIKFIDCIAGIAQLVRVCGR 103
           KPYADTCGVVPHLLADLRLHQYSTIKFIDCIAGIAQLVRVCGR
Sbjct: 61  KPYADTCGVVPHLLADLRLHQYSTIKFIDCIAGIAQLVRVCGR 103

The following BLAST results are available for this feature:
BLAST of Csor.00g238590 vs.
Match NameE-valueIdentityDescription
BLAST of Csor.00g238590 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6590323.15.75e-70100.00hypothetical protein SDJN03_15746, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of Csor.00g238590 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Csor.00g238590 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g238590.m01Csor.00g238590.m01mRNA