Csor.00g037780 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGACGGTTTCCTCTGTAGCGAAGTCGCTGTTGCCTCCTCGGCGTAGGCTCCACCTTGATCCTAACAATTCTTTATTCTTTCCTTGTAAGTTCTTGTTCTCTAATTTTTCTCTTTTCCGTTGCTGGTGTTTAGTTTTCTGAATCGAATTGGAATCTCTCCTTGTTTTTGAGTTGTATTGTTTGAAATTTGAATTGGAAATTGGATGTTTTCTTCAATCTGGATAATGCGAGCCAAAACTATGCTCGTTTGCTCTTGGATTAGAACATTTTACTTCCTTGAATTGAATCAAATAATCGTTCTAGCCTTCGGTTTCTCCTGCTACCATTTGCGGTCAGTTCATATTTACTTGGAGAGCAGGGGAATTACAAGTTTTGGAAAATTGTACGTAATTATTGTTCAGAATTTGCGTTCATCCTGAACTGTGTATTGTTTGATGGATTTTCTGTAGATGAACCCGGGAAGCAGGTAAAGAGCGCCATTAGGATGAAGAATACTAGCAGATCCCATGTAGCTTTCAAGGTATCACTTCAATTTCTTCCATTGCAGTCCTTCTTTCGCCTTTTGTTCCTTTAATTATTCTTATATTGATTTCTTACTTTTTAATTCCCAACAAGCCATAATGGAAACATGAATGCATGTGAATCTGTTCTTCTGATGTTCTTTTTGTTCTTTACTTTGAGACGATGACTGTTATCATGCTGATCTTCCATTACCATTTTCTGAAACTCCATGCATCTTAGTAATTGTTCATCTTCTGGGTAATGAATGTTGTTGGGAACTTTATTAAACGATAGTTTCTGGTTTCAGCCATCTAACAATTGCTTGTTTCTTAGCATAGTTAGTCCATGGGGTCTATTTGATTTCCTCAATCAGTGTAAATTCTGCATTCAAATTGTTTTCAGCTCAGGAAATCAAGTTTTTCGACCTTTTAATTCGTTAACGACGAGGATTTTGTATCAAATTTTTCAAAGAGTTATTGTGAGATCCCACATCGGTTGGAGATGGAAACGAAACATTTTTTATAAGGGTGTAGAAACTTCTCCTTAGCATACACGTTTTAAAAACCTTGAGGGGAAGCCTAGAAGGAAAAGTTTAAAGATGACGATATTTTCTAGCGATGGGTTTGGACTTGGGCTATTACAAATGGTATTAGAGCCCGACACCAGTTGGTGTGTGAGCAAGGACGCTAGGCCCCAAGTGAGGTGGATTGTGAGACAACGAATGCCAGCGAGGACGCTAAGCCTCGAAGGGGGGTCGATAGTGAGATCCCACATCGGTTGGAGATATTCTTTATAAGAGTGTAGAAATCTTCTTAGTAGACACGTTTTTAAACCTTGAGAGGAAACCTAGAAGGGAAAGCCCAAAGAGGACAATATTGGCTAGCGATGAGCTTGGGCTGATATAGTTATTGCAAGTCTCAACTCATTCAACGATTAGATTATTGAAGTCATCGTATTATCAATCTAGGTTTGGTTTTCGTAATGTAAATTGATATCGCCTGAAAGGCAGGTAAAGGCTGATGAATTGCATACTTGTTTGAATGGCATTTCAAGCCGATATGAACTGCTGCTCATTTCTATGATTAATAGCTTAAAATGTGAGTATCTGTACCATTCTAAATGGTCTCTACATCTTTCTTCAGTTTCAAACTACGGCCCCGAAGAGCTGTTATATGCGGCCTCCTGGTGGCATTCTTGCTCCTGAAGAAATTTTTATTGCAACTGGTAATGTTTCCACTGTCATGATCTTTTCTCTTTTTGGTGGTAATGTTAGTGTTTTCAATTCATTAATGTACTTTCATTTCTCATTTTTCATGGTTTTCTAACTTTTGATACTAATGAACATCAACACAAACAAGTATTCATTGTCTTCTTCCATCTTTTTAACAGTCTTCAGATTCGTGGAGCACCCCGAGAACAATGAAAAGCCAAAGGACCATAAGAGCAAAATTAAGTTTAAGATTATGAGCCTTAAAGTGAAAGGTGGAACAGAATACGCACCCGAGCTGGTGAGTCGCTCTATGCTGTTTCGAGCTTTGTTAAACTTAAACCTCTCTGGCTCTCTATTATGAAAGATAAGCCAATGTCTTGATTTCTTTGTTACTTCTTGTGTACTGTTTTGACAGCTTAAGGTTTCCATTGTGCTAACTCAATGCAGTCGATTTTGATTAATGACTTTTTTGTCAAACAGCCTCTCGAGTTTGTGTTGAGGATTATTGGGAGTGAGTCCCATATTGGTTAATTTAGTGGAAGAGCATGGGTTTATAAGTGGGGAATACTATCTCCATTGGTATGAGGCCTTTTGGGGAAGCCCAAAGCAAAGCCATGAGAGCCATGCCCTAAACTTAGCCATGTCAATAGAATCTTCAAATATCGAACAAAGAATTGTCAGCCTCGAAGGTGTAGTCAAAAGTGACTAGAGTGTCGAACAAAGAGTGTACTTTGTTCGAGAGCTCCAGATAACGGAGTCAAGCCTCGATTAAGGGGAGGCTATTCGAGAGCTCCGTAAGTCACAGTGAAGGCTTATAAGTTTGTAGGTTCTATTGTCATCTAATCATTGTACTAGTTTGTTTAATTGTTATTCAAAGTTGTACGAAATCGATTCGGTTCATGTTTGTGTTCGACCACTAAAGGATACATTGTGAAAGTTCGAATTTAGTTGTCTAACTTTTTGATATTGTGTATTTATGTTCTGCAACATTTTCAGTTTGATGAACAGAAGGACCAAGTAATAGTAGAGCGGATTTTGCGGGTCATATTCGTAGATCCAGAGCGACCTAGTGCAGTAAGTAAATCAATGAACACAAGTCTTGTTCTTGGGAGATAGAGGTCCCAATTTAACTGCATTTTGATATTATAGGCTCTCGAAAGACTGAAACGTCAATTGGCCGAAGCCGAGGCTGCACTCGAAGCACGCAAGAAGCCTCCAGCAGAATCAGGTCCTCAGGTTGTTGGTGGTGAAGGTCTTGTGATAGATGAATGGGTACGTACGATGATCTTGACCCAACCCAACCCAACCCAACCTGACCGTGCATTTTCGATTCGATATTCATGTTATCAATGTTGAGCTCATCTTATATTCCTATACTGATCTTATAATCCTCTGGATTTCGATTTTGGATCGGACAGAAAGAACGGAGGGAGAAGTACCTCGCTCGTCAACAAGTCGGCGCAGTAGACTCGGTGTTGAGTTAG ATGACGGTTTCCTCTGTAGCGAAGTCGCTGTTGCCTCCTCGGCGTAGGCTCCACCTTGATCCTAACAATTCTTTATTCTTTCCTTATGAACCCGGGAAGCAGGTAAAGAGCGCCATTAGGATGAAGAATACTAGCAGATCCCATGTAGCTTTCAAGTTTCAAACTACGGCCCCGAAGAGCTGTTATATGCGGCCTCCTGGTGGCATTCTTGCTCCTGAAGAAATTTTTATTGCAACTGTCTTCAGATTCGTGGAGCACCCCGAGAACAATGAAAAGCCAAAGGACCATAAGAGCAAAATTAAGTTTAAGATTATGAGCCTTAAAGTGAAAGGTGGAACAGAATACGCACCCGAGCTGTTTGATGAACAGAAGGACCAAGTAATAGTAGAGCGGATTTTGCGGGTCATATTCGTAGATCCAGAGCGACCTAGTGCAGCTCTCGAAAGACTGAAACGTCAATTGGCCGAAGCCGAGGCTGCACTCGAAGCACGCAAGAAGCCTCCAGCAGAATCAGGTCCTCAGGTTGTTGGTGGTGAAGGTCTTGTGATAGATGAATGGAAAGAACGGAGGGAGAAGTACCTCGCTCGTCAACAAGTCGGCGCAGTAGACTCGGTGTTGAGTTAG ATGACGGTTTCCTCTGTAGCGAAGTCGCTGTTGCCTCCTCGGCGTAGGCTCCACCTTGATCCTAACAATTCTTTATTCTTTCCTTATGAACCCGGGAAGCAGGTAAAGAGCGCCATTAGGATGAAGAATACTAGCAGATCCCATGTAGCTTTCAAGTTTCAAACTACGGCCCCGAAGAGCTGTTATATGCGGCCTCCTGGTGGCATTCTTGCTCCTGAAGAAATTTTTATTGCAACTGTCTTCAGATTCGTGGAGCACCCCGAGAACAATGAAAAGCCAAAGGACCATAAGAGCAAAATTAAGTTTAAGATTATGAGCCTTAAAGTGAAAGGTGGAACAGAATACGCACCCGAGCTGTTTGATGAACAGAAGGACCAAGTAATAGTAGAGCGGATTTTGCGGGTCATATTCGTAGATCCAGAGCGACCTAGTGCAGCTCTCGAAAGACTGAAACGTCAATTGGCCGAAGCCGAGGCTGCACTCGAAGCACGCAAGAAGCCTCCAGCAGAATCAGGTCCTCAGGTTGTTGGTGGTGAAGGTCTTGTGATAGATGAATGGAAAGAACGGAGGGAGAAGTACCTCGCTCGTCAACAAGTCGGCGCAGTAGACTCGGTGTTGAGTTAG MTVSSVAKSLLPPRRRLHLDPNNSLFFPYEPGKQVKSAIRMKNTSRSHVAFKFQTTAPKSCYMRPPGGILAPEEIFIATVFRFVEHPENNEKPKDHKSKIKFKIMSLKVKGGTEYAPELFDEQKDQVIVERILRVIFVDPERPSAALERLKRQLAEAEAALEARKKPPAESGPQVVGGEGLVIDEWKERREKYLARQQVGAVDSVLS Homology
BLAST of Csor.00g037780 vs. ExPASy Swiss-Prot
Match: Q1ECE0 (Vesicle-associated protein 4-1 OS=Arabidopsis thaliana OX=3702 GN=PVA41 PE=2 SV=1) HSP 1 Score: 324.3 bits (830), Expect = 9.9e-88 Identity = 162/206 (78.64%), Postives = 186/206 (90.29%), Query Frame = 0
BLAST of Csor.00g037780 vs. ExPASy Swiss-Prot
Match: Q8VYN2 (Vesicle-associated protein 4-2 OS=Arabidopsis thaliana OX=3702 GN=PVA42 PE=1 SV=1) HSP 1 Score: 307.4 bits (786), Expect = 1.2e-82 Identity = 152/204 (74.51%), Postives = 178/204 (87.25%), Query Frame = 0
BLAST of Csor.00g037780 vs. ExPASy Swiss-Prot
Match: Q8LPQ7 (Vesicle-associated protein 4-3 OS=Arabidopsis thaliana OX=3702 GN=PVA43 PE=2 SV=1) HSP 1 Score: 269.2 bits (687), Expect = 3.8e-71 Identity = 137/204 (67.16%), Postives = 170/204 (83.33%), Query Frame = 0
BLAST of Csor.00g037780 vs. ExPASy Swiss-Prot
Match: Q9SYC9 (Vesicle-associated protein 1-4 OS=Arabidopsis thaliana OX=3702 GN=PVA14 PE=2 SV=1) HSP 1 Score: 57.0 bits (136), Expect = 2.9e-07 Identity = 36/125 (28.80%), Postives = 61/125 (48.80%), Query Frame = 0
BLAST of Csor.00g037780 vs. ExPASy Swiss-Prot
Match: B9DHD7 (Vesicle-associated protein 2-2 OS=Arabidopsis thaliana OX=3702 GN=PVA22 PE=1 SV=1) HSP 1 Score: 56.2 bits (134), Expect = 5.0e-07 Identity = 39/120 (32.50%), Postives = 57/120 (47.50%), Query Frame = 0
BLAST of Csor.00g037780 vs. NCBI nr
Match: KAG6591995.1 (Vesicle-associated protein 4-2, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 407 bits (1046), Expect = 3.98e-143 Identity = 207/207 (100.00%), Postives = 207/207 (100.00%), Query Frame = 0
BLAST of Csor.00g037780 vs. NCBI nr
Match: XP_022937296.1 (vesicle-associated protein 4-1-like [Cucurbita moschata]) HSP 1 Score: 405 bits (1042), Expect = 1.54e-141 Identity = 206/207 (99.52%), Postives = 207/207 (100.00%), Query Frame = 0
BLAST of Csor.00g037780 vs. NCBI nr
Match: XP_023535121.1 (vesicle-associated protein 4-1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 404 bits (1039), Expect = 4.42e-141 Identity = 206/207 (99.52%), Postives = 206/207 (99.52%), Query Frame = 0
BLAST of Csor.00g037780 vs. NCBI nr
Match: XP_022976559.1 (vesicle-associated protein 4-1-like [Cucurbita maxima]) HSP 1 Score: 401 bits (1031), Expect = 7.32e-140 Identity = 204/206 (99.03%), Postives = 204/206 (99.03%), Query Frame = 0
BLAST of Csor.00g037780 vs. NCBI nr
Match: KAG7024870.1 (Vesicle-associated protein 4-1, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 398 bits (1022), Expect = 9.07e-137 Identity = 207/220 (94.09%), Postives = 207/220 (94.09%), Query Frame = 0
BLAST of Csor.00g037780 vs. ExPASy TrEMBL
Match: A0A6J1F9Z2 (vesicle-associated protein 4-1-like OS=Cucurbita moschata OX=3662 GN=LOC111443622 PE=4 SV=1) HSP 1 Score: 405 bits (1042), Expect = 7.48e-142 Identity = 206/207 (99.52%), Postives = 207/207 (100.00%), Query Frame = 0
BLAST of Csor.00g037780 vs. ExPASy TrEMBL
Match: A0A6J1INV3 (vesicle-associated protein 4-1-like OS=Cucurbita maxima OX=3661 GN=LOC111476917 PE=4 SV=1) HSP 1 Score: 401 bits (1031), Expect = 3.55e-140 Identity = 204/206 (99.03%), Postives = 204/206 (99.03%), Query Frame = 0
BLAST of Csor.00g037780 vs. ExPASy TrEMBL
Match: A0A5A7T1W8 (Vesicle-associated protein 4-1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold20G00390 PE=4 SV=1) HSP 1 Score: 378 bits (970), Expect = 5.23e-131 Identity = 190/204 (93.14%), Postives = 197/204 (96.57%), Query Frame = 0
BLAST of Csor.00g037780 vs. ExPASy TrEMBL
Match: A0A1S3BZ62 (vesicle-associated protein 4-1 OS=Cucumis melo OX=3656 GN=LOC103494990 PE=4 SV=1) HSP 1 Score: 378 bits (970), Expect = 5.23e-131 Identity = 190/204 (93.14%), Postives = 197/204 (96.57%), Query Frame = 0
BLAST of Csor.00g037780 vs. ExPASy TrEMBL
Match: A0A0A0LFW4 (MSP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G851700 PE=4 SV=1) HSP 1 Score: 377 bits (969), Expect = 7.18e-131 Identity = 190/204 (93.14%), Postives = 196/204 (96.08%), Query Frame = 0
BLAST of Csor.00g037780 vs. TAIR 10
Match: AT5G54110.1 (membrane-associated mannitol-induced ) HSP 1 Score: 324.3 bits (830), Expect = 7.0e-89 Identity = 162/206 (78.64%), Postives = 186/206 (90.29%), Query Frame = 0
BLAST of Csor.00g037780 vs. TAIR 10
Match: AT4G21450.1 (PapD-like superfamily protein ) HSP 1 Score: 307.4 bits (786), Expect = 8.9e-84 Identity = 152/204 (74.51%), Postives = 178/204 (87.25%), Query Frame = 0
BLAST of Csor.00g037780 vs. TAIR 10
Match: AT4G21450.3 (PapD-like superfamily protein ) HSP 1 Score: 293.9 bits (751), Expect = 1.0e-79 Identity = 151/223 (67.71%), Postives = 178/223 (79.82%), Query Frame = 0
BLAST of Csor.00g037780 vs. TAIR 10
Match: AT4G05060.1 (PapD-like superfamily protein ) HSP 1 Score: 269.2 bits (687), Expect = 2.7e-72 Identity = 137/204 (67.16%), Postives = 170/204 (83.33%), Query Frame = 0
BLAST of Csor.00g037780 vs. TAIR 10
Match: AT4G21450.2 (PapD-like superfamily protein ) HSP 1 Score: 189.9 bits (481), Expect = 2.1e-48 Identity = 89/118 (75.42%), Postives = 103/118 (87.29%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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