Csor.00g098830 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g098830
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	Copper transporter
Location	Csor_Chr01: 3372611 .. 3373099 (-)
RNA-Seq Expression	Csor.00g098830
Synteny	Csor.00g098830

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSsinglepolypeptidestart_codonstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCACTCCGACCCTCCGCCGCCGCCGATGGGTCCGATGAGCGGCGGCTCCGATGACGACATGCACTCTCACGGGATGCCGTCGTCATCGGGCATGACGATGATGCACATGACATTCTTCTGGGGAAAAAACACCCAAGTTTTATTCTCCGGCTGGCCGGGCAACCAGTCCGGCATGTATGCGCTGGCGTTGATTTTAGTGTTTTTGCTGGCGGTGTCTGTAGAGTGGCTGTCTCGTTGGCGGCTGATGACGGAGATGGGGCCGAGAAATTTCGCCGCCGGGATCGTGCAGACGGCGGTGCATGGGGTTAGAATCGGAATTGCGTACTTGGTTATGCTTGCTTTGATGTCGTTCAACGGCGGCGTTTTTATCGCTGCCATCGCCGGTCATTCATTTGGGTTTCTGATTTTTGGGAGCAGAGTCATGAACAACACGAAATCAAAGCCGTACCAGCAGGGTACAGCCGATCTTCCATCTGGAGTTTGCTGA

mRNA sequence

ATGCACTCCGACCCTCCGCCGCCGCCGATGGGTCCGATGAGCGGCGGCTCCGATGACGACATGCACTCTCACGGGATGCCGTCGTCATCGGGCATGACGATGATGCACATGACATTCTTCTGGGGAAAAAACACCCAAGTTTTATTCTCCGGCTGGCCGGGCAACCAGTCCGGCATGTATGCGCTGGCGTTGATTTTAGTGTTTTTGCTGGCGGTGTCTGTAGAGTGGCTGTCTCGTTGGCGGCTGATGACGGAGATGGGGCCGAGAAATTTCGCCGCCGGGATCGTGCAGACGGCGGTGCATGGGGTTAGAATCGGAATTGCGTACTTGGTTATGCTTGCTTTGATGTCGTTCAACGGCGGCGTTTTTATCGCTGCCATCGCCGGTCATTCATTTGGGTTTCTGATTTTTGGGAGCAGAGTCATGAACAACACGAAATCAAAGCCGTACCAGCAGGGTACAGCCGATCTTCCATCTGGAGTTTGCTGA

Coding sequence (CDS)

ATGCACTCCGACCCTCCGCCGCCGCCGATGGGTCCGATGAGCGGCGGCTCCGATGACGACATGCACTCTCACGGGATGCCGTCGTCATCGGGCATGACGATGATGCACATGACATTCTTCTGGGGAAAAAACACCCAAGTTTTATTCTCCGGCTGGCCGGGCAACCAGTCCGGCATGTATGCGCTGGCGTTGATTTTAGTGTTTTTGCTGGCGGTGTCTGTAGAGTGGCTGTCTCGTTGGCGGCTGATGACGGAGATGGGGCCGAGAAATTTCGCCGCCGGGATCGTGCAGACGGCGGTGCATGGGGTTAGAATCGGAATTGCGTACTTGGTTATGCTTGCTTTGATGTCGTTCAACGGCGGCGTTTTTATCGCTGCCATCGCCGGTCATTCATTTGGGTTTCTGATTTTTGGGAGCAGAGTCATGAACAACACGAAATCAAAGCCGTACCAGCAGGGTACAGCCGATCTTCCATCTGGAGTTTGCTGA

Protein sequence

MHSDPPPPPMGPMSGGSDDDMHSHGMPSSSGMTMMHMTFFWGKNTQVLFSGWPGNQSGMYALALILVFLLAVSVEWLSRWRLMTEMGPRNFAAGIVQTAVHGVRIGIAYLVMLALMSFNGGVFIAAIAGHSFGFLIFGSRVMNNTKSKPYQQGTADLPSGVC

Homology

[Close]

BLAST of Csor.00g098830 vs. ExPASy Swiss-Prot
Match: Q9STG2 (Copper transporter 2 OS=Arabidopsis thaliana OX=3702 GN=COPT2 PE=2 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 2.4e-36
Identity = 88/164 (53.66%), Postives = 105/164 (64.02%), Query Frame = 0


Query: 1   MHSDPPPPPMGPMSGGSDDDMHSHGMPSSSGMTMMHMTFFWGKNTQVLFSGWPGNQSGMY 60
           MH  PPP P       S   M +H  P    M MMHMTFFWGKNT+VLFSGWPG  SGMY
Sbjct: 6   MHDMPPPSP-------SSSSMSNHTTPH---MMMMHMTFFWGKNTEVLFSGWPGTSSGMY 65

Query: 61  ALALILVFLLAVSVEWLSRWRLMTEMGPRNFAAGIVQTAVHGVRIGIAYLVMLALMSFNG 120
           AL LI++FLLAV  EWL+   ++   G  N AAG+ QTAV+ ++ G++YLVMLA+MSFN 
Sbjct: 66  ALCLIVIFLLAVIAEWLAHSPILRVSGSTNRAAGLAQTAVYTLKTGLSYLVMLAVMSFNA 125

Query: 121 GVFIAAIAGHSFGFLIFGSRVMNNTKSKPYQQGTADL--PSGVC 163
           GVFI AIAG+  GF +FGS      K     Q TA+L  PS  C
Sbjct: 126 GVFIVAIAGYGVGFFLFGSTTF---KKPSDDQKTAELLPPSSGC 156

[Close]

BLAST of Csor.00g098830 vs. ExPASy Swiss-Prot
Match: Q8GWP3 (Copper transporter 6 OS=Arabidopsis thaliana OX=3702 GN=COPT6 PE=2 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 6.9e-36
Identity = 80/144 (55.56%), Postives = 101/144 (70.14%), Query Frame = 0


Query: 11  GPMSGGSDDDMHSHGMPSSSGMTMMHMTFFWGKNTQVLFSGWPGNQSGMYALALILVFLL 70
           G M   S   M +H   ++S M MMHMTFFWGKNT++LFSGWPG   GMY L LI+VFLL
Sbjct: 4   GNMPPSSPSSMVNH---TNSNMIMMHMTFFWGKNTEILFSGWPGTSLGMYVLCLIVVFLL 63

Query: 71  AVSVEWLSRWRLMTEMGPRNFAAGIVQTAVHGVRIGIAYLVMLALMSFNGGVFIAAIAGH 130
           AV VEWL+   ++   G  + A G+VQTAV+ ++ G+AYLVMLA+MSFNGGVFI AIAG 
Sbjct: 64  AVIVEWLAHSSILRGRGSTSRAKGLVQTAVYTLKTGLAYLVMLAVMSFNGGVFIVAIAGF 123

Query: 131 SFGFLIFGSRVMNNTK--SKPYQQ 153
           + GF++FGS    N     KP++Q
Sbjct: 124 AVGFMLFGSTAFKNPSDDEKPFEQ 144

[Close]

BLAST of Csor.00g098830 vs. ExPASy Swiss-Prot
Match: Q39065 (Copper transporter 1 OS=Arabidopsis thaliana OX=3702 GN=COPT1 PE=2 SV=2)

HSP 1 Score: 146.0 bits (367), Expect = 3.8e-34
Identity = 82/152 (53.95%), Postives = 101/152 (66.45%), Query Frame = 0


Query: 1   MHSDPPPPPMGPMSGGSDDDMHSHGMPSSSG-----MTMMHMTFFWGKNTQVLFSGWPGN 60
           MH  P P      S  S   M ++G  +  G       MMHMTFFWGKNT+VLFSGWPG 
Sbjct: 6   MHGMPRP---SSSSSSSPSSMMNNGSMNEGGGHHHMKMMMHMTFFWGKNTEVLFSGWPGT 65

Query: 61  QSGMYALALILVFLLAVSVEWLSRWRLM--TEMGPRNFAAGIVQTAVHGVRIGIAYLVML 120
            SGMYAL LI VF LAV  EWL+   L+  +     N AAG++QTAV+ +RIG+AYLVML
Sbjct: 66  SSGMYALCLIFVFFLAVLTEWLAHSSLLRGSTGDSANRAAGLIQTAVYTLRIGLAYLVML 125

Query: 121 ALMSFNGGVFIAAIAGHSFGFLIFGSRVMNNT 146
           A+MSFN GVF+ A+AGH+ GF++FGS+   NT
Sbjct: 126 AVMSFNAGVFLVALAGHAVGFMLFGSQTFRNT 154

[Close]

BLAST of Csor.00g098830 vs. ExPASy Swiss-Prot
Match: Q60EN8 (Copper transporter 2 OS=Oryza sativa subsp. japonica OX=39947 GN=COPT2 PE=1 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 1.8e-28
Identity = 66/128 (51.56%), Postives = 89/128 (69.53%), Query Frame = 0


Query: 35  MHMTFFWGKNTQVLFSGWPGNQSGMYALALILVFLLAVSVEW----LSRWRLMTEMGPRN 94
           MHMTFFWGKNT+VLF+ WPG + GMYALA++ +F LAV +E+    +   RL     PR 
Sbjct: 23  MHMTFFWGKNTEVLFTLWPGARGGMYALAILFMFALAVLLEFRGYRVLEARLARRRAPR- 82

Query: 95  FAAGIVQTAVHGVRIGIAYLVMLALMSFNGGVFIAAIAGHSFGFLIFGSRVMNNTKSKPY 154
            AA  ++TAVH VR+G+AYL+MLALMSFNGGVF+A +AGH+ GFL F + +     + P 
Sbjct: 83  -AAAALRTAVHAVRVGVAYLIMLALMSFNGGVFLAIVAGHAAGFLAFRAGLCGGGPAPPL 142

Query: 155 QQGTADLP 159
           ++   + P
Sbjct: 143 EEDRKNDP 148

[Close]

BLAST of Csor.00g098830 vs. ExPASy Swiss-Prot
Match: Q94EE4 (Copper transporter 1 OS=Oryza sativa subsp. japonica OX=39947 GN=COPT1 PE=2 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 6.9e-28
Identity = 72/132 (54.55%), Postives = 89/132 (67.42%), Query Frame = 0


Query: 10  MGPMSGGSDDDMHSHGMPSSSGMTMMHMTFFWGKNTQVLFSGWPGNQSGMYALALILVFL 69
           MG MS  +       GM +   M   HMTFFWGKN++VLF+ WPG + GMYALALI VF 
Sbjct: 8   MGGMSPPAAGAAAQGGMGAMKSMRYTHMTFFWGKNSEVLFTMWPGTRGGMYALALIFVFA 67

Query: 70  LAVSVEWLSRWR---LMTEMGPRNFAA-GIVQTAVHGVRIGIAYLVMLALMSFNGGVFIA 129
           LAV VE+L   R    +  +  R  AA G+ + AVH VR+G+AYL+MLALMSFNGGVF+ 
Sbjct: 68  LAVIVEFLGSRRADACLAALARRAPAAGGLARAAVHTVRVGVAYLLMLALMSFNGGVFLV 127

Query: 130 AIAGHSFGFLIF 138
           A+AGH+ GFL F
Sbjct: 128 AVAGHAAGFLAF 139

[Close]

BLAST of Csor.00g098830 vs. NCBI nr
Match: KAG6607277.1 (Copper transporter 6, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 326 bits (836), Expect = 1.36e-112
Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0


Query: 1   MHSDPPPPPMGPMSGGSDDDMHSHGMPSSSGMTMMHMTFFWGKNTQVLFSGWPGNQSGMY 60
           MHSDPPPPPMGPMSGGSDDDMHSHGMPSSSGMTMMHMTFFWGKNTQVLFSGWPGNQSGMY
Sbjct: 1   MHSDPPPPPMGPMSGGSDDDMHSHGMPSSSGMTMMHMTFFWGKNTQVLFSGWPGNQSGMY 60

Query: 61  ALALILVFLLAVSVEWLSRWRLMTEMGPRNFAAGIVQTAVHGVRIGIAYLVMLALMSFNG 120
           ALALILVFLLAVSVEWLSRWRLMTEMGPRNFAAGIVQTAVHGVRIGIAYLVMLALMSFNG
Sbjct: 61  ALALILVFLLAVSVEWLSRWRLMTEMGPRNFAAGIVQTAVHGVRIGIAYLVMLALMSFNG 120

Query: 121 GVFIAAIAGHSFGFLIFGSRVMNNTKSKPYQQGTADLPSGVC 162
           GVFIAAIAGHSFGFLIFGSRVMNNTKSKPYQQGTADLPSGVC
Sbjct: 121 GVFIAAIAGHSFGFLIFGSRVMNNTKSKPYQQGTADLPSGVC 162

[Close]

BLAST of Csor.00g098830 vs. NCBI nr
Match: XP_022948632.1 (copper transporter 6-like [Cucurbita moschata])

HSP 1 Score: 326 bits (836), Expect = 4.31e-112
Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0


Query: 1   MHSDPPPPPMGPMSGGSDDDMHSHGMPSSSGMTMMHMTFFWGKNTQVLFSGWPGNQSGMY 60
           MHSDPPPPPMGPMSGGSDDDMHSHGMPSSSGMTMMHMTFFWGKNTQVLFSGWPGNQSGMY
Sbjct: 34  MHSDPPPPPMGPMSGGSDDDMHSHGMPSSSGMTMMHMTFFWGKNTQVLFSGWPGNQSGMY 93

Query: 61  ALALILVFLLAVSVEWLSRWRLMTEMGPRNFAAGIVQTAVHGVRIGIAYLVMLALMSFNG 120
           ALALILVFLLAVSVEWLSRWRLMTEMGPRNFAAGIVQTAVHGVRIGIAYLVMLALMSFNG
Sbjct: 94  ALALILVFLLAVSVEWLSRWRLMTEMGPRNFAAGIVQTAVHGVRIGIAYLVMLALMSFNG 153

Query: 121 GVFIAAIAGHSFGFLIFGSRVMNNTKSKPYQQGTADLPSGVC 162
           GVFIAAIAGHSFGFLIFGSRVMNNTKSKPYQQGTADLPSGVC
Sbjct: 154 GVFIAAIAGHSFGFLIFGSRVMNNTKSKPYQQGTADLPSGVC 195

[Close]

BLAST of Csor.00g098830 vs. NCBI nr
Match: XP_023525857.1 (copper transporter 6-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 320 bits (820), Expect = 1.18e-109
Identity = 158/162 (97.53%), Postives = 160/162 (98.77%), Query Frame = 0


Query: 1   MHSDPPPPPMGPMSGGSDDDMHSHGMPSSSGMTMMHMTFFWGKNTQVLFSGWPGNQSGMY 60
           MHSDPPPPPM PMSGGSDDDMHSHGMPSSSGMTMMHMTFFWGKNTQVLFSGWPGNQSGMY
Sbjct: 34  MHSDPPPPPMAPMSGGSDDDMHSHGMPSSSGMTMMHMTFFWGKNTQVLFSGWPGNQSGMY 93

Query: 61  ALALILVFLLAVSVEWLSRWRLMTEMGPRNFAAGIVQTAVHGVRIGIAYLVMLALMSFNG 120
           ALALILVFLLAVSVEWLSRWRLMTEMGPRNFAAGIVQTAVHGVRIGIAY+VMLALMSFNG
Sbjct: 94  ALALILVFLLAVSVEWLSRWRLMTEMGPRNFAAGIVQTAVHGVRIGIAYMVMLALMSFNG 153

Query: 121 GVFIAAIAGHSFGFLIFGSRVMNNTKSKPYQQGTADLPSGVC 162
           GVFIAAIAGHSFGFLIFGSRV+NNTKSKPY QGTADLPSGVC
Sbjct: 154 GVFIAAIAGHSFGFLIFGSRVLNNTKSKPYDQGTADLPSGVC 195

[Close]

BLAST of Csor.00g098830 vs. NCBI nr
Match: XP_022998908.1 (copper transporter 6-like [Cucurbita maxima])

HSP 1 Score: 317 bits (811), Expect = 2.79e-108
Identity = 157/162 (96.91%), Postives = 158/162 (97.53%), Query Frame = 0


Query: 1   MHSDPPPPPMGPMSGGSDDDMHSHGMPSSSGMTMMHMTFFWGKNTQVLFSGWPGNQSGMY 60
           MHSDPPPPPMGPMSGGSDDDMHSHGMPSSSGMTMMHMTFFWGKNTQVLFSGWPGNQSGMY
Sbjct: 34  MHSDPPPPPMGPMSGGSDDDMHSHGMPSSSGMTMMHMTFFWGKNTQVLFSGWPGNQSGMY 93

Query: 61  ALALILVFLLAVSVEWLSRWRLMTEMGPRNFAAGIVQTAVHGVRIGIAYLVMLALMSFNG 120
           ALALILVFLLAVSVEWLSRWRLMTEMGPRNFAAGIVQTAVHGVRIGIAY+VMLALMSFNG
Sbjct: 94  ALALILVFLLAVSVEWLSRWRLMTEMGPRNFAAGIVQTAVHGVRIGIAYMVMLALMSFNG 153

Query: 121 GVFIAAIAGHSFGFLIFGSRVMNNTKSKPYQQGTADLPSGVC 162
           GVFIAAIAGHSFGFLIFGSRV  NTKSKPY  GTADLPSGVC
Sbjct: 154 GVFIAAIAGHSFGFLIFGSRVTKNTKSKPYDPGTADLPSGVC 195

[Close]

BLAST of Csor.00g098830 vs. NCBI nr
Match: KAG7036955.1 (Copper transporter 6 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 315 bits (806), Expect = 5.52e-106
Identity = 156/162 (96.30%), Postives = 157/162 (96.91%), Query Frame = 0


Query: 1   MHSDPPPPPMGPMSGGSDDDMHSHGMPSSSGMTMMHMTFFWGKNTQVLFSGWPGNQSGMY 60
           MHSDPPPPPMGPMSGGSDDDMHSHGMPSSSGMTMMHMTFFWGKNTQVLFSGWPGNQSGMY
Sbjct: 137 MHSDPPPPPMGPMSGGSDDDMHSHGMPSSSGMTMMHMTFFWGKNTQVLFSGWPGNQSGMY 196

Query: 61  ALALILVFLLAVSVEWLSRWRLMTEMGPRNFAAGIVQTAVHGVRIGIAYLVMLALMSFNG 120
           ALALILVFLLAVSVEWLSRWRLMTEMGPRNFAAGIVQTAVHGVRIGIAY+VMLALMSFNG
Sbjct: 197 ALALILVFLLAVSVEWLSRWRLMTEMGPRNFAAGIVQTAVHGVRIGIAYMVMLALMSFNG 256

Query: 121 GVFIAAIAGHSFGFLIFGSRVMNNTKSKPYQQGTADLPSGVC 162
           GVFIAAIAGHSFGFLIFGSRV  NT SKPY Q TADLPSGVC
Sbjct: 257 GVFIAAIAGHSFGFLIFGSRVTKNTNSKPYDQSTADLPSGVC 298

[Close]

BLAST of Csor.00g098830 vs. ExPASy TrEMBL
Match: A0A6J1G9S4 (Copper transporter OS=Cucurbita moschata OX=3662 GN=LOC111452254 PE=3 SV=1)

HSP 1 Score: 326 bits (836), Expect = 2.09e-112
Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0


Query: 1   MHSDPPPPPMGPMSGGSDDDMHSHGMPSSSGMTMMHMTFFWGKNTQVLFSGWPGNQSGMY 60
           MHSDPPPPPMGPMSGGSDDDMHSHGMPSSSGMTMMHMTFFWGKNTQVLFSGWPGNQSGMY
Sbjct: 34  MHSDPPPPPMGPMSGGSDDDMHSHGMPSSSGMTMMHMTFFWGKNTQVLFSGWPGNQSGMY 93

Query: 61  ALALILVFLLAVSVEWLSRWRLMTEMGPRNFAAGIVQTAVHGVRIGIAYLVMLALMSFNG 120
           ALALILVFLLAVSVEWLSRWRLMTEMGPRNFAAGIVQTAVHGVRIGIAYLVMLALMSFNG
Sbjct: 94  ALALILVFLLAVSVEWLSRWRLMTEMGPRNFAAGIVQTAVHGVRIGIAYLVMLALMSFNG 153

Query: 121 GVFIAAIAGHSFGFLIFGSRVMNNTKSKPYQQGTADLPSGVC 162
           GVFIAAIAGHSFGFLIFGSRVMNNTKSKPYQQGTADLPSGVC
Sbjct: 154 GVFIAAIAGHSFGFLIFGSRVMNNTKSKPYQQGTADLPSGVC 195

[Close]

BLAST of Csor.00g098830 vs. ExPASy TrEMBL
Match: A0A6J1KI42 (Copper transporter OS=Cucurbita maxima OX=3661 GN=LOC111493431 PE=3 SV=1)

HSP 1 Score: 317 bits (811), Expect = 1.35e-108
Identity = 157/162 (96.91%), Postives = 158/162 (97.53%), Query Frame = 0


Query: 1   MHSDPPPPPMGPMSGGSDDDMHSHGMPSSSGMTMMHMTFFWGKNTQVLFSGWPGNQSGMY 60
           MHSDPPPPPMGPMSGGSDDDMHSHGMPSSSGMTMMHMTFFWGKNTQVLFSGWPGNQSGMY
Sbjct: 34  MHSDPPPPPMGPMSGGSDDDMHSHGMPSSSGMTMMHMTFFWGKNTQVLFSGWPGNQSGMY 93

Query: 61  ALALILVFLLAVSVEWLSRWRLMTEMGPRNFAAGIVQTAVHGVRIGIAYLVMLALMSFNG 120
           ALALILVFLLAVSVEWLSRWRLMTEMGPRNFAAGIVQTAVHGVRIGIAY+VMLALMSFNG
Sbjct: 94  ALALILVFLLAVSVEWLSRWRLMTEMGPRNFAAGIVQTAVHGVRIGIAYMVMLALMSFNG 153

Query: 121 GVFIAAIAGHSFGFLIFGSRVMNNTKSKPYQQGTADLPSGVC 162
           GVFIAAIAGHSFGFLIFGSRV  NTKSKPY  GTADLPSGVC
Sbjct: 154 GVFIAAIAGHSFGFLIFGSRVTKNTKSKPYDPGTADLPSGVC 195

[Close]

BLAST of Csor.00g098830 vs. ExPASy TrEMBL
Match: A0A0A0LY50 (Copper transporter OS=Cucumis sativus OX=3659 GN=Csa_1G526820 PE=3 SV=1)

HSP 1 Score: 246 bits (628), Expect = 9.52e-81
Identity = 122/162 (75.31%), Postives = 137/162 (84.57%), Query Frame = 0


Query: 1   MHSDPPPPPMGPMSGGSDDDMHSHGMPSSSGMTMMHMTFFWGKNTQVLFSGWPGNQSGMY 60
           MH DPPPPP+ P S GS DDMH+H M SS+    MHMTFFWGKNTQVLFSGWPG++SGMY
Sbjct: 36  MHMDPPPPPIAPTSRGSGDDMHTHDMMSSA----MHMTFFWGKNTQVLFSGWPGDRSGMY 95

Query: 61  ALALILVFLLAVSVEWLSRWRLMTEMGPRNFAAGIVQTAVHGVRIGIAYLVMLALMSFNG 120
           A+AL+ VFLLAV+VEWLS WR+MTE+GPRN AAGIVQTAVHG+R+GIAYLVMLALMSFNG
Sbjct: 96  AVALVFVFLLAVAVEWLSCWRMMTEVGPRNVAAGIVQTAVHGIRMGIAYLVMLALMSFNG 155

Query: 121 GVFIAAIAGHSFGFLIFGSRVMNNTKSKPYQQGTADLPSGVC 162
           GVFI A+AGH  GFL+FGSRV+   KS  Y QGT DLPS VC
Sbjct: 156 GVFIVAVAGHMVGFLVFGSRVVKKEKSSAYDQGTVDLPSRVC 193

[Close]

BLAST of Csor.00g098830 vs. ExPASy TrEMBL
Match: A0A5D3BDI0 (Copper transporter OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G001740 PE=3 SV=1)

HSP 1 Score: 240 bits (613), Expect = 5.66e-79
Identity = 120/162 (74.07%), Postives = 135/162 (83.33%), Query Frame = 0


Query: 1   MHSDPPPPPMGPMSGGSDDDMHSHGMPSSSGMTMMHMTFFWGKNTQVLFSGWPGNQSGMY 60
           MH D PPPPM P S GS DD+H+H M S +    MHMTFFWGKNTQVLFSGWPG++SGMY
Sbjct: 1   MHMDSPPPPMSPTSRGSGDDLHTHDMMSPA----MHMTFFWGKNTQVLFSGWPGDRSGMY 60

Query: 61  ALALILVFLLAVSVEWLSRWRLMTEMGPRNFAAGIVQTAVHGVRIGIAYLVMLALMSFNG 120
           A+AL+ VFLLAV+VEWLS WR+MTE GPRN AAGIVQTAVHG+R+GIAYLVMLALMSFNG
Sbjct: 61  AVALVFVFLLAVAVEWLSCWRVMTEAGPRNVAAGIVQTAVHGIRMGIAYLVMLALMSFNG 120

Query: 121 GVFIAAIAGHSFGFLIFGSRVMNNTKSKPYQQGTADLPSGVC 162
           GVFI A+AGH  GFL+FGSRV+   KS  Y QG+ADLPS VC
Sbjct: 121 GVFIVAVAGHMVGFLVFGSRVVKKEKSSAYDQGSADLPSRVC 158

[Close]

BLAST of Csor.00g098830 vs. ExPASy TrEMBL
Match: A0A1S3C5H1 (Copper transporter OS=Cucumis melo OX=3656 GN=LOC103497119 PE=3 SV=1)

HSP 1 Score: 240 bits (613), Expect = 1.77e-78
Identity = 120/162 (74.07%), Postives = 135/162 (83.33%), Query Frame = 0


Query: 1   MHSDPPPPPMGPMSGGSDDDMHSHGMPSSSGMTMMHMTFFWGKNTQVLFSGWPGNQSGMY 60
           MH D PPPPM P S GS DD+H+H M S +    MHMTFFWGKNTQVLFSGWPG++SGMY
Sbjct: 35  MHMDSPPPPMSPTSRGSGDDLHTHDMMSPA----MHMTFFWGKNTQVLFSGWPGDRSGMY 94

Query: 61  ALALILVFLLAVSVEWLSRWRLMTEMGPRNFAAGIVQTAVHGVRIGIAYLVMLALMSFNG 120
           A+AL+ VFLLAV+VEWLS WR+MTE GPRN AAGIVQTAVHG+R+GIAYLVMLALMSFNG
Sbjct: 95  AVALVFVFLLAVAVEWLSCWRVMTEAGPRNVAAGIVQTAVHGIRMGIAYLVMLALMSFNG 154

Query: 121 GVFIAAIAGHSFGFLIFGSRVMNNTKSKPYQQGTADLPSGVC 162
           GVFI A+AGH  GFL+FGSRV+   KS  Y QG+ADLPS VC
Sbjct: 155 GVFIVAVAGHMVGFLVFGSRVVKKEKSSAYDQGSADLPSRVC 192

[Close]

BLAST of Csor.00g098830 vs. TAIR 10
Match: AT3G46900.1 (copper transporter 2 )

HSP 1 Score: 153.3 bits (386), Expect = 1.7e-37
Identity = 88/164 (53.66%), Postives = 105/164 (64.02%), Query Frame = 0


Query: 1   MHSDPPPPPMGPMSGGSDDDMHSHGMPSSSGMTMMHMTFFWGKNTQVLFSGWPGNQSGMY 60
           MH  PPP P       S   M +H  P    M MMHMTFFWGKNT+VLFSGWPG  SGMY
Sbjct: 6   MHDMPPPSP-------SSSSMSNHTTPH---MMMMHMTFFWGKNTEVLFSGWPGTSSGMY 65

Query: 61  ALALILVFLLAVSVEWLSRWRLMTEMGPRNFAAGIVQTAVHGVRIGIAYLVMLALMSFNG 120
           AL LI++FLLAV  EWL+   ++   G  N AAG+ QTAV+ ++ G++YLVMLA+MSFN 
Sbjct: 66  ALCLIVIFLLAVIAEWLAHSPILRVSGSTNRAAGLAQTAVYTLKTGLSYLVMLAVMSFNA 125

Query: 121 GVFIAAIAGHSFGFLIFGSRVMNNTKSKPYQQGTADL--PSGVC 163
           GVFI AIAG+  GF +FGS      K     Q TA+L  PS  C
Sbjct: 126 GVFIVAIAGYGVGFFLFGSTTF---KKPSDDQKTAELLPPSSGC 156

[Close]

BLAST of Csor.00g098830 vs. TAIR 10
Match: AT2G26975.1 (Ctr copper transporter family )

HSP 1 Score: 151.8 bits (382), Expect = 4.9e-37
Identity = 80/144 (55.56%), Postives = 101/144 (70.14%), Query Frame = 0


Query: 11  GPMSGGSDDDMHSHGMPSSSGMTMMHMTFFWGKNTQVLFSGWPGNQSGMYALALILVFLL 70
           G M   S   M +H   ++S M MMHMTFFWGKNT++LFSGWPG   GMY L LI+VFLL
Sbjct: 4   GNMPPSSPSSMVNH---TNSNMIMMHMTFFWGKNTEILFSGWPGTSLGMYVLCLIVVFLL 63

Query: 71  AVSVEWLSRWRLMTEMGPRNFAAGIVQTAVHGVRIGIAYLVMLALMSFNGGVFIAAIAGH 130
           AV VEWL+   ++   G  + A G+VQTAV+ ++ G+AYLVMLA+MSFNGGVFI AIAG 
Sbjct: 64  AVIVEWLAHSSILRGRGSTSRAKGLVQTAVYTLKTGLAYLVMLAVMSFNGGVFIVAIAGF 123

Query: 131 SFGFLIFGSRVMNNTK--SKPYQQ 153
           + GF++FGS    N     KP++Q
Sbjct: 124 AVGFMLFGSTAFKNPSDDEKPFEQ 144

[Close]

BLAST of Csor.00g098830 vs. TAIR 10
Match: AT5G59030.1 (copper transporter 1 )

HSP 1 Score: 146.0 bits (367), Expect = 2.7e-35
Identity = 82/152 (53.95%), Postives = 101/152 (66.45%), Query Frame = 0


Query: 1   MHSDPPPPPMGPMSGGSDDDMHSHGMPSSSG-----MTMMHMTFFWGKNTQVLFSGWPGN 60
           MH  P P      S  S   M ++G  +  G       MMHMTFFWGKNT+VLFSGWPG 
Sbjct: 6   MHGMPRP---SSSSSSSPSSMMNNGSMNEGGGHHHMKMMMHMTFFWGKNTEVLFSGWPGT 65

Query: 61  QSGMYALALILVFLLAVSVEWLSRWRLM--TEMGPRNFAAGIVQTAVHGVRIGIAYLVML 120
            SGMYAL LI VF LAV  EWL+   L+  +     N AAG++QTAV+ +RIG+AYLVML
Sbjct: 66  SSGMYALCLIFVFFLAVLTEWLAHSSLLRGSTGDSANRAAGLIQTAVYTLRIGLAYLVML 125

Query: 121 ALMSFNGGVFIAAIAGHSFGFLIFGSRVMNNT 146
           A+MSFN GVF+ A+AGH+ GF++FGS+   NT
Sbjct: 126 AVMSFNAGVFLVALAGHAVGFMLFGSQTFRNT 154

[Close]

BLAST of Csor.00g098830 vs. TAIR 10
Match: AT5G59040.1 (copper transporter 3 )

HSP 1 Score: 123.6 bits (309), Expect = 1.4e-28
Identity = 71/150 (47.33%), Postives = 91/150 (60.67%), Query Frame = 0


Query: 3   SDPPPPPMGPMSGGSDDDMHSHGMPSSSGMTMMHMTFFWGKNTQVLFSGWPGNQSGMYAL 62
           S P  P   P S       H HG        MMHMTFFWGK T+VLF GWPG    MY +
Sbjct: 7   SSPAAPAPSPSS--FFQHRHRHG-------GMMHMTFFWGKTTEVLFDGWPGTSLKMYWV 66

Query: 63  ALILVFLLAVSVEWLSRWRLMTEMGPRNFAAGIVQTAVHGVRIGIAYLVMLALMSFNGGV 122
            L ++F+++   E LSR   M + GP +   G++QTAV+ VR  ++YLVMLA+MSFNGGV
Sbjct: 67  CLAVIFVISAFSECLSRCGFM-KSGPASLGGGLLQTAVYTVRAALSYLVMLAVMSFNGGV 126

Query: 123 FIAAIAGHSFGFLIFGSRVMNNTKSKPYQQ 153
           F+AA+AG   GF+IFGSR    T S  + +
Sbjct: 127 FVAAMAGFGLGFMIFGSRAFRATSSNSHTE 146

[Close]

BLAST of Csor.00g098830 vs. TAIR 10
Match: AT2G37925.1 (copper transporter 4 )

HSP 1 Score: 116.3 bits (290), Expect = 2.3e-26
Identity = 59/114 (51.75%), Postives = 77/114 (67.54%), Query Frame = 0


Query: 33  TMMHMTFFWGKNTQVLFSGWPGNQSGMYALALILVFLLAVSVEWLSRW--RLMTEMGPRN 92
           +++H TF+WG N QVLFSGWPG+  GMYALALI VF LA   EWL+R       + G   
Sbjct: 28  SLLHPTFYWGYNCQVLFSGWPGSDRGMYALALIFVFFLAFLAEWLARCSDASSIKQGADK 87

Query: 93  FAAGIVQTAVHGVRIGIAYLVMLALMSFNGGVFIAAIAGHSFGFLIFGSRVMNN 145
            A    +TA++ V+ G +YLV+LA++SFNGGVF+AAI GH+ GF +F  R   N
Sbjct: 88  LAKVAFRTAMYTVKSGFSYLVILAVVSFNGGVFLAAIFGHALGFAVFRGRAFRN 141

The following BLAST results are available for this feature:

BLAST of Csor.00g098830 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9STG2	2.4e-36	53.66	Copper transporter 2 OS=Arabidopsis thaliana OX=3702 GN=COPT2 PE=2 SV=1	[more]
Q8GWP3	6.9e-36	55.56	Copper transporter 6 OS=Arabidopsis thaliana OX=3702 GN=COPT6 PE=2 SV=1	[more]
Q39065	3.8e-34	53.95	Copper transporter 1 OS=Arabidopsis thaliana OX=3702 GN=COPT1 PE=2 SV=2	[more]
Q60EN8	1.8e-28	51.56	Copper transporter 2 OS=Oryza sativa subsp. japonica OX=39947 GN=COPT2 PE=1 SV=1	[more]
Q94EE4	6.9e-28	54.55	Copper transporter 1 OS=Oryza sativa subsp. japonica OX=39947 GN=COPT1 PE=2 SV=1	[more]

BLAST of Csor.00g098830 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6607277.1	1.36e-112	100.00	Copper transporter 6, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022948632.1	4.31e-112	100.00	copper transporter 6-like [Cucurbita moschata]	[more]
XP_023525857.1	1.18e-109	97.53	copper transporter 6-like [Cucurbita pepo subsp. pepo]	[more]
XP_022998908.1	2.79e-108	96.91	copper transporter 6-like [Cucurbita maxima]	[more]
KAG7036955.1	5.52e-106	96.30	Copper transporter 6 [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of Csor.00g098830 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G9S4	2.09e-112	100.00	Copper transporter OS=Cucurbita moschata OX=3662 GN=LOC111452254 PE=3 SV=1	[more]
A0A6J1KI42	1.35e-108	96.91	Copper transporter OS=Cucurbita maxima OX=3661 GN=LOC111493431 PE=3 SV=1	[more]
A0A0A0LY50	9.52e-81	75.31	Copper transporter OS=Cucumis sativus OX=3659 GN=Csa_1G526820 PE=3 SV=1	[more]
A0A5D3BDI0	5.66e-79	74.07	Copper transporter OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G0...	[more]
A0A1S3C5H1	1.77e-78	74.07	Copper transporter OS=Cucumis melo OX=3656 GN=LOC103497119 PE=3 SV=1	[more]

BLAST of Csor.00g098830 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G46900.1	1.7e-37	53.66	copper transporter 2	[more]
AT2G26975.1	4.9e-37	55.56	Ctr copper transporter family	[more]
AT5G59030.1	2.7e-35	53.95	copper transporter 1	[more]
AT5G59040.1	1.4e-28	47.33	copper transporter 3	[more]
AT2G37925.1	2.3e-26	51.75	copper transporter 4	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007274	Ctr copper transporter	PFAM	PF04145	Ctr	coord: 37..84 e-value: 1.0E-8 score: 35.9 coord: 91..137 e-value: 1.0E-9 score: 39.1
IPR007274	Ctr copper transporter	PANTHER	PTHR12483	SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS	coord: 22..151
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..25
None	No IPR available	PANTHER	PTHR12483:SF24	COPPER TRANSPORTER 1	coord: 22..151

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g098830.m01	Csor.00g098830.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006878	cellular copper ion homeostasis
biological_process	GO:0035434	copper ion transmembrane transport
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005375	copper ion transmembrane transporter activity