Carg24855 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg24855
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial isoform X1
Location	Carg_Chr16: 9187219 .. 9187631 (+)
RNA-Seq Expression	Carg24855
Synteny	Carg24855

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCCGCTTGCCGAAGAATTGCGAGCAGAATCTCTCAATCCTCCATCAGAACAGTTGTTCGTACAAATTCGCCGCCCAAAGCTTCATCTTTTCCGTTCACTTTACCTTTCAATTGCACTGCACCATCTGTTCGCCGGTTCTCGCTCGCCAGGTAAATCTGGTTATCCTTTCATTTCTTCTTGTTTTGTGTATCTTGTTGTGAGTTGTTTCAATATTTTGTTTGTTTTTTTTTTTCAAAACTTCTTGATCTACTACTAGGGCCCCGTCGGAGCTGGGATGCATGCAATCTCTTTTGCCTTTTCACAACGCGGTTGCTGGAGCGAGAATGATTTCGTGTCTGAGTACAAATTCGAGGAGTTGTCGTGCGCTTTCTCAGGGTACTCTCTGCTGCACCTCTCCCAGCCTCTAA

mRNA sequence

ATGGCTTCCGCTTGCCGAAGAATTGCGAGCAGAATCTCTCAATCCTCCATCAGAACAGTTGTTCGTACAAATTCGCCGCCCAAAGCTTCATCTTTTCCGTTCACTTTACCTTTCAATTGCACTGCACCATCTGTTCGCCGGTTCTCGCTCGCCAGGGCCCCGTCGGAGCTGGGATGCATGCAATCTCTTTTGCCTTTTCACAACGCGGTTGCTGGAGCGAGAATGATTTCGTGTCTGAGTACAAATTCGAGGAGTTGTCGTGCGCTTTCTCAGGGTACTCTCTGCTGCACCTCTCCCAGCCTCTAA

Coding sequence (CDS)

ATGGCTTCCGCTTGCCGAAGAATTGCGAGCAGAATCTCTCAATCCTCCATCAGAACAGTTGTTCGTACAAATTCGCCGCCCAAAGCTTCATCTTTTCCGTTCACTTTACCTTTCAATTGCACTGCACCATCTGTTCGCCGGTTCTCGCTCGCCAGGGCCCCGTCGGAGCTGGGATGCATGCAATCTCTTTTGCCTTTTCACAACGCGGTTGCTGGAGCGAGAATGATTTCGTGTCTGAGTACAAATTCGAGGAGTTGTCGTGCGCTTTCTCAGGGTACTCTCTGCTGCACCTCTCCCAGCCTCTAA

Protein sequence

MASACRRIASRISQSSIRTVVRTNSPPKASSFPFTLPFNCTAPSVRRFSLARAPSELGCMQSLLPFHNAVAGARMISCLSTNSRSCRALSQGTLCCTSPSL

Homology

[Close]

BLAST of Carg24855 vs. NCBI nr
Match: KAG7015719.1 (hypothetical protein SDJN02_23356, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 195.3 bits (495), Expect = 2.6e-46
Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 0


Query: 1   MASACRRIASRISQSSIRTVVRTNSPPKASSFPFTLPFNCTAPSVRRFSLARAPSELGCM 60
           MASACRRIASRISQSSIRTVVRTNSPPKASSFPFTLPFNCTAPSVRRFSLARAPSELGCM
Sbjct: 1   MASACRRIASRISQSSIRTVVRTNSPPKASSFPFTLPFNCTAPSVRRFSLARAPSELGCM 60

Query: 61  QSLLPFHNAVAGARMISCLSTNSRSCRALSQGTLCCTSPSL 102
           QSLLPFHNAVAGARMISCLSTNSRSCRALSQGTLCCTSPSL
Sbjct: 61  QSLLPFHNAVAGARMISCLSTNSRSCRALSQGTLCCTSPSL 101

[Close]

BLAST of Carg24855 vs. NCBI nr
Match: XP_022923170.1 (uncharacterized protein LOC111430946 isoform X1 [Cucurbita moschata])

HSP 1 Score: 190.7 bits (483), Expect = 6.3e-45
Identity = 99/101 (98.02%), Postives = 100/101 (99.01%), Query Frame = 0


Query: 1   MASACRRIASRISQSSIRTVVRTNSPPKASSFPFTLPFNCTAPSVRRFSLARAPSELGCM 60
           MASACRRIASRISQSSIRTVVRTNSPPKASS PFTLPFNCTAPSVRRFSLARAPSELGC+
Sbjct: 1   MASACRRIASRISQSSIRTVVRTNSPPKASSSPFTLPFNCTAPSVRRFSLARAPSELGCV 60

Query: 61  QSLLPFHNAVAGARMISCLSTNSRSCRALSQGTLCCTSPSL 102
           QSLLPFHNAVAGARMISCLSTNSRSCRALSQGTLCCTSPSL
Sbjct: 61  QSLLPFHNAVAGARMISCLSTNSRSCRALSQGTLCCTSPSL 101

[Close]

BLAST of Carg24855 vs. NCBI nr
Match: XP_022965218.1 (uncharacterized protein LOC111465140 isoform X1 [Cucurbita maxima])

HSP 1 Score: 188.0 bits (476), Expect = 4.1e-44
Identity = 98/101 (97.03%), Postives = 99/101 (98.02%), Query Frame = 0


Query: 1   MASACRRIASRISQSSIRTVVRTNSPPKASSFPFTLPFNCTAPSVRRFSLARAPSELGCM 60
           MASACRRIASRISQSSIRTVVRTNSPPKASS PFTLPFNCTAPSVRRFSLA APSELGC+
Sbjct: 1   MASACRRIASRISQSSIRTVVRTNSPPKASSSPFTLPFNCTAPSVRRFSLAGAPSELGCV 60

Query: 61  QSLLPFHNAVAGARMISCLSTNSRSCRALSQGTLCCTSPSL 102
           QSLLPFHNAVAGARMISCLSTNSRSCRALSQGTLCCTSPSL
Sbjct: 61  QSLLPFHNAVAGARMISCLSTNSRSCRALSQGTLCCTSPSL 101

[Close]

BLAST of Carg24855 vs. NCBI nr
Match: XP_023551885.1 (uncharacterized protein LOC111809723 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 183.0 bits (463), Expect = 1.3e-42
Identity = 95/101 (94.06%), Postives = 98/101 (97.03%), Query Frame = 0


Query: 1   MASACRRIASRISQSSIRTVVRTNSPPKASSFPFTLPFNCTAPSVRRFSLARAPSELGCM 60
           MASACRRIASRISQSS RTVVRTNSPPKASS PFTLPFN TAPSVRRFSLA++PSELGC+
Sbjct: 1   MASACRRIASRISQSSFRTVVRTNSPPKASSSPFTLPFNSTAPSVRRFSLAKSPSELGCV 60

Query: 61  QSLLPFHNAVAGARMISCLSTNSRSCRALSQGTLCCTSPSL 102
           QSLLPFHNAVAGARMISCLSTNSRSCRALSQGTLCCTSPSL
Sbjct: 61  QSLLPFHNAVAGARMISCLSTNSRSCRALSQGTLCCTSPSL 101

[Close]

BLAST of Carg24855 vs. NCBI nr
Match: XP_022923171.1 (uncharacterized protein LOC111430946 isoform X2 [Cucurbita moschata])

HSP 1 Score: 171.0 bits (432), Expect = 5.2e-39
Identity = 89/91 (97.80%), Postives = 90/91 (98.90%), Query Frame = 0


Query: 1  MASACRRIASRISQSSIRTVVRTNSPPKASSFPFTLPFNCTAPSVRRFSLARAPSELGCM 60
          MASACRRIASRISQSSIRTVVRTNSPPKASS PFTLPFNCTAPSVRRFSLARAPSELGC+
Sbjct: 1  MASACRRIASRISQSSIRTVVRTNSPPKASSSPFTLPFNCTAPSVRRFSLARAPSELGCV 60

Query: 61 QSLLPFHNAVAGARMISCLSTNSRSCRALSQ 92
          QSLLPFHNAVAGARMISCLSTNSRSCRALSQ
Sbjct: 61 QSLLPFHNAVAGARMISCLSTNSRSCRALSQ 91

[Close]

BLAST of Carg24855 vs. ExPASy Swiss-Prot
Match: Q6NNL9 (Protein NONRESPONDING TO OXYLIPINS 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=NOXY2 PE=1 SV=2)

HSP 1 Score: 51.2 bits (121), Expect = 7.9e-06
Identity = 40/103 (38.83%), Postives = 60/103 (58.25%), Query Frame = 0


Query: 1   MASACRRIASRISQSSIRTVVRTNS--PPKASSFPFTLPFNCTAPSVRRFSLARAPSELG 60
           MAS CR + S+ + S+ R+ +   S  P  ASSF    P    +P       +R   +LG
Sbjct: 1   MASRCRSL-SKPAFSAFRSAMNKPSIRPKSASSFIGVPP----SP-----GFSRPIGQLG 60

Query: 61  CMQSLLPFHNAVAGARMISCLSTNSRSCRALSQGTLCCTSPSL 102
            +QSLLP ++AVA AR+ SCL  +S++ R+L+QG LC  +P +
Sbjct: 61  SLQSLLPLYSAVASARLTSCLGIDSQNSRSLAQGMLCSANPGV 93

[Close]

BLAST of Carg24855 vs. ExPASy TrEMBL
Match: A0A6J1EAY8 (uncharacterized protein LOC111430946 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111430946 PE=4 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 3.1e-45
Identity = 99/101 (98.02%), Postives = 100/101 (99.01%), Query Frame = 0


Query: 1   MASACRRIASRISQSSIRTVVRTNSPPKASSFPFTLPFNCTAPSVRRFSLARAPSELGCM 60
           MASACRRIASRISQSSIRTVVRTNSPPKASS PFTLPFNCTAPSVRRFSLARAPSELGC+
Sbjct: 1   MASACRRIASRISQSSIRTVVRTNSPPKASSSPFTLPFNCTAPSVRRFSLARAPSELGCV 60

Query: 61  QSLLPFHNAVAGARMISCLSTNSRSCRALSQGTLCCTSPSL 102
           QSLLPFHNAVAGARMISCLSTNSRSCRALSQGTLCCTSPSL
Sbjct: 61  QSLLPFHNAVAGARMISCLSTNSRSCRALSQGTLCCTSPSL 101

[Close]

BLAST of Carg24855 vs. ExPASy TrEMBL
Match: A0A6J1HN90 (uncharacterized protein LOC111465140 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111465140 PE=4 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 2.0e-44
Identity = 98/101 (97.03%), Postives = 99/101 (98.02%), Query Frame = 0


Query: 1   MASACRRIASRISQSSIRTVVRTNSPPKASSFPFTLPFNCTAPSVRRFSLARAPSELGCM 60
           MASACRRIASRISQSSIRTVVRTNSPPKASS PFTLPFNCTAPSVRRFSLA APSELGC+
Sbjct: 1   MASACRRIASRISQSSIRTVVRTNSPPKASSSPFTLPFNCTAPSVRRFSLAGAPSELGCV 60

Query: 61  QSLLPFHNAVAGARMISCLSTNSRSCRALSQGTLCCTSPSL 102
           QSLLPFHNAVAGARMISCLSTNSRSCRALSQGTLCCTSPSL
Sbjct: 61  QSLLPFHNAVAGARMISCLSTNSRSCRALSQGTLCCTSPSL 101

[Close]

BLAST of Carg24855 vs. ExPASy TrEMBL
Match: A0A6J1E633 (uncharacterized protein LOC111430946 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111430946 PE=4 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 2.5e-39
Identity = 89/91 (97.80%), Postives = 90/91 (98.90%), Query Frame = 0


Query: 1  MASACRRIASRISQSSIRTVVRTNSPPKASSFPFTLPFNCTAPSVRRFSLARAPSELGCM 60
          MASACRRIASRISQSSIRTVVRTNSPPKASS PFTLPFNCTAPSVRRFSLARAPSELGC+
Sbjct: 1  MASACRRIASRISQSSIRTVVRTNSPPKASSSPFTLPFNCTAPSVRRFSLARAPSELGCV 60

Query: 61 QSLLPFHNAVAGARMISCLSTNSRSCRALSQ 92
          QSLLPFHNAVAGARMISCLSTNSRSCRALSQ
Sbjct: 61 QSLLPFHNAVAGARMISCLSTNSRSCRALSQ 91

[Close]

BLAST of Carg24855 vs. ExPASy TrEMBL
Match: A0A6J1HL39 (uncharacterized protein LOC111465140 isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111465140 PE=4 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 1.6e-38
Identity = 88/94 (93.62%), Postives = 90/94 (95.74%), Query Frame = 0


Query: 1  MASACRRIASRISQSSIRTVVRTNSPPKASSFPFTLPFNCTAPSVRRFSLARAPSELGCM 60
          MASACRRIASRISQSSIRTVVRTNSPPKASS PFTLPFNCTAPSVRRFSLA APSELGC+
Sbjct: 1  MASACRRIASRISQSSIRTVVRTNSPPKASSSPFTLPFNCTAPSVRRFSLAGAPSELGCV 60

Query: 61 QSLLPFHNAVAGARMISCLSTNSRSCRALSQGTL 95
          QSLLPFHNAVAGARMISCLSTNSRSCRALSQ  +
Sbjct: 61 QSLLPFHNAVAGARMISCLSTNSRSCRALSQDAI 94

[Close]

BLAST of Carg24855 vs. ExPASy TrEMBL
Match: A0A6J1HQE3 (uncharacterized protein LOC111465140 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111465140 PE=4 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 1.6e-38
Identity = 88/91 (96.70%), Postives = 89/91 (97.80%), Query Frame = 0


Query: 1  MASACRRIASRISQSSIRTVVRTNSPPKASSFPFTLPFNCTAPSVRRFSLARAPSELGCM 60
          MASACRRIASRISQSSIRTVVRTNSPPKASS PFTLPFNCTAPSVRRFSLA APSELGC+
Sbjct: 1  MASACRRIASRISQSSIRTVVRTNSPPKASSSPFTLPFNCTAPSVRRFSLAGAPSELGCV 60

Query: 61 QSLLPFHNAVAGARMISCLSTNSRSCRALSQ 92
          QSLLPFHNAVAGARMISCLSTNSRSCRALSQ
Sbjct: 61 QSLLPFHNAVAGARMISCLSTNSRSCRALSQ 91

[Close]

BLAST of Carg24855 vs. TAIR 10
Match: AT4G17310.1 (unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G47455.7); Has 164 Blast hits to 164 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 164; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 105.1 bits (261), Expect = 3.3e-23
Identity = 62/103 (60.19%), Postives = 73/103 (70.87%), Query Frame = 0


Query: 1   MASACRRIASRISQSSIRTVVR--TNSPPKASSFPFTLPFNCTAPSVRRFSLARAPSELG 60
           MASACR++ +R S SS+++ +R  T S   ASS  F LP   T    R FS +R PSELG
Sbjct: 1   MASACRKLFNRASVSSLKSTLRSTTGSTSAASSAGFRLPSQPT----RHFSFSRCPSELG 60

Query: 61  CMQSLLPFHNAVAGARMISCLSTNSRSCRALSQGTLCCTSPSL 102
           C+QSLLP H+ VA AR+ SCLST SRS RALSQGTLCCTSP L
Sbjct: 61  CVQSLLPLHSTVAAARLTSCLSTTSRSSRALSQGTLCCTSPDL 99

[Close]

BLAST of Carg24855 vs. TAIR 10
Match: AT4G17310.2 (unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G47455.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 86.7 bits (213), Expect = 1.2e-17
Identity = 53/93 (56.99%), Postives = 64/93 (68.82%), Query Frame = 0


Query: 1  MASACRRIASRISQSSIRTVVR--TNSPPKASSFPFTLPFNCTAPSVRRFSLARAPSELG 60
          MASACR++ +R S SS+++ +R  T S   ASS  F LP   T    R FS +R PSELG
Sbjct: 1  MASACRKLFNRASVSSLKSTLRSTTGSTSAASSAGFRLPSQPT----RHFSFSRCPSELG 60

Query: 61 CMQSLLPFHNAVAGARMISCLSTNSRSCRALSQ 92
          C+QSLLP H+ VA AR+ SCLST SRS RALSQ
Sbjct: 61 CVQSLLPLHSTVAAARLTSCLSTTSRSSRALSQ 89

[Close]

BLAST of Carg24855 vs. TAIR 10
Match: AT5G47455.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G17310.1); Has 147 Blast hits to 147 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 147; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 82.4 bits (202), Expect = 2.3e-16
Identity = 49/97 (50.52%), Postives = 61/97 (62.89%), Query Frame = 0


Query: 7   RIASRISQSSIRTVVRT----------NSPPKASSFPFTLPFNCTAPSVRRFSLARAPSE 66
           R  SR S SS ++ +R+          +SP  ASS  F +P    A  + RFS +R PSE
Sbjct: 4   RFMSRSSVSSFKSAIRSSFRNSPIGTGSSPAAASSAGFRIPSKPAASPLPRFSFSRCPSE 63

Query: 67  LGCMQSLLPFHNAVAGARMISCLSTNSRSCRALSQGT 94
           LGC+QSLLP H+ VA AR+ SCLST SRS RAL+QGT
Sbjct: 64  LGCVQSLLPLHSTVAAARLTSCLSTTSRSSRALTQGT 100

[Close]

BLAST of Carg24855 vs. TAIR 10
Match: AT5G47455.6 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G17310.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 82.4 bits (202), Expect = 2.3e-16
Identity = 49/97 (50.52%), Postives = 61/97 (62.89%), Query Frame = 0


Query: 7   RIASRISQSSIRTVVRT----------NSPPKASSFPFTLPFNCTAPSVRRFSLARAPSE 66
           R  SR S SS ++ +R+          +SP  ASS  F +P    A  + RFS +R PSE
Sbjct: 4   RFMSRSSVSSFKSAIRSSFRNSPIGTGSSPAAASSAGFRIPSKPAASPLPRFSFSRCPSE 63

Query: 67  LGCMQSLLPFHNAVAGARMISCLSTNSRSCRALSQGT 94
           LGC+QSLLP H+ VA AR+ SCLST SRS RAL+QGT
Sbjct: 64  LGCVQSLLPLHSTVAAARLTSCLSTTSRSSRALTQGT 100

[Close]

BLAST of Carg24855 vs. TAIR 10
Match: AT5G47455.7 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G17310.1); Has 147 Blast hits to 147 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 147; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 82.4 bits (202), Expect = 2.3e-16
Identity = 49/97 (50.52%), Postives = 61/97 (62.89%), Query Frame = 0


Query: 7   RIASRISQSSIRTVVRT----------NSPPKASSFPFTLPFNCTAPSVRRFSLARAPSE 66
           R  SR S SS ++ +R+          +SP  ASS  F +P    A  + RFS +R PSE
Sbjct: 4   RFMSRSSVSSFKSAIRSSFRNSPIGTGSSPAAASSAGFRIPSKPAASPLPRFSFSRCPSE 63

Query: 67  LGCMQSLLPFHNAVAGARMISCLSTNSRSCRALSQGT 94
           LGC+QSLLP H+ VA AR+ SCLST SRS RAL+QGT
Sbjct: 64  LGCVQSLLPLHSTVAAARLTSCLSTTSRSSRALTQGT 100

The following BLAST results are available for this feature:

BLAST of Carg24855 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7015719.1	2.6e-46	100.00	hypothetical protein SDJN02_23356, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022923170.1	6.3e-45	98.02	uncharacterized protein LOC111430946 isoform X1 [Cucurbita moschata]	[more]
XP_022965218.1	4.1e-44	97.03	uncharacterized protein LOC111465140 isoform X1 [Cucurbita maxima]	[more]
XP_023551885.1	1.3e-42	94.06	uncharacterized protein LOC111809723 isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_022923171.1	5.2e-39	97.80	uncharacterized protein LOC111430946 isoform X2 [Cucurbita moschata]	[more]

BLAST of Carg24855 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6NNL9	7.9e-06	38.83	Protein NONRESPONDING TO OXYLIPINS 2, mitochondrial OS=Arabidopsis thaliana OX=3...	[more]

BLAST of Carg24855 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EAY8	3.1e-45	98.02	uncharacterized protein LOC111430946 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1HN90	2.0e-44	97.03	uncharacterized protein LOC111465140 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1E633	2.5e-39	97.80	uncharacterized protein LOC111430946 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1HL39	1.6e-38	93.62	uncharacterized protein LOC111465140 isoform X3 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1HQE3	1.6e-38	96.70	uncharacterized protein LOC111465140 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]

BLAST of Carg24855 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G17310.1	3.3e-23	60.19	unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 9 plant structures; EXPR...	[more]
AT4G17310.2	1.2e-17	56.99	unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 9 plant structures; EXPR...	[more]
AT5G47455.1	2.3e-16	50.52	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G47455.6	2.3e-16	50.52	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G47455.7	2.3e-16	50.52	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33156:SF9	OS02G0658300 PROTEIN	coord: 1..100
IPR043459	NFD6/NOXY2-like	PANTHER	PTHR33156	OS02G0230000 PROTEIN	coord: 1..100

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg24855-RA	Carg24855-RA	mRNA