Carg15135 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg15135
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Actin depolymerizing factor, putative
Location	Carg_Chr16: 678420 .. 682075 (+)
RNA-Seq Expression	Carg15135
Synteny	Carg15135

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGAGCCAAAGGCAAAGACTTGCCCGGAAAAAGTACAGAGAAGAACACCCGGAACTGTTTCCGGAAGTAGAGCCAACGCCACCTAAAGACCCCGACAAGAAGAAGAAGAAGAGTAAATTCAAGCGCAAGAAGGCAGAATCGAACTCAACCAGAGACCCAAATAAACCGCACAAGAAGGGATTTAAGAAACACCCTCTTAGAGTGCCTGGGATGAAACCCGGAGAAAGCTGCTTCATCTGCAAGGCCAAAGACCACATTGCTAAGCTTTGCCCCGAAAAGGCTCAATGGGAGAAGAACAAGGTTTGTTTTTCCGTTAATCCCTAAGTGTTTCTGGTGTTCCACTGTTTACCGAGTTTATGGAAATCTTGCTCATAGAATAGGGTTCTCTTTCCATAGCTATCACGGTAATGAAAGTGGTGTCGGTGACATTGGTTATGTGATGGAGAACGACCCACCATTTATATGGGCGTGGAAACCTTCCCAAGACGCTTTTTAAAGCCTTGAGGGAAGCCCGAAAGGGAAAGTCCAAAGAGGACAATATTAGCTAGCAGTGGATCTGGGTCGTTACAGGTTAGGAGGATTGGATTTTCCTCTCCTATTCGATGCAAACTATTGTCACTTCAAAATAGATTAATAAGGTCTTGGGGTGGTGGGTGGCATGGATTATTTGGAAGAGCTTTGTGATGATATCTGATATAATAATTGTGATTTAAGTTCCACCTTGATTTAGTTAAACAATTTCCATTAAGTTAAGCAAAACTATGATTCTTTTAGGTATAATAGCTTGCTTTTGCATATCATTACTGGACATTAATGCAAAGTTCTTGCGATAGTGTCATGCTGAAGGGAGTCTTATGTCCTGTCATTTGGCATTCTCAGATATGCTTGCTTTGTCGGAGACGAGGGCACAGCCTCAAAAATTGCCCAGACAAAAATGAAAGGACTGTGGATAAGAAGTTATGCTATAACTGTGGTGAAACAGGACATTCACTGGCTAATTGTCCGCAGCCTCTTCAAGATGGTAAATTTTATTACAATTCAAACTCATATTCACTGGAGTTCTTATGGGGTTTTCTTCTTCTAAATTATATGTCTCGTTTTCCATCTTGGAACTGTAGGAGGAACCAAATTCGCCAGTTGTTTTATTTGTAATGAAAGTGGACACTTAAGCAAAAACTGTCCGAAGAACACTCATGGGATCTACCCTAAGGTATTTGCTGTAATGAATTCTAGGTTGTCCCTCAGTTTCCTCGTATCATACAATTTTAAGGATGCCCTCCTATGATGTTCTGCAGGGGGGAGGTTGTAAAACTTGTGGGGAAGTCACACATTTAGCTAAGGATTGTCCAAACAAAGCCACCCAATTTTCTGCTGGGGCTTATGATGGTAACAGATGTAAGTTTCCAAATTTGTTTCTATTTTTTCATTTTGTGTGTGTTAGACATAGAAACCATTTTGAATCATCTCCATTTTGACTGAGATACGAGGGTTAGACATAGAAACCATGACCTTTGATCATATTATTTCATCCACTCAAGGTCAAGCCTGCATGGATGAGTATCAAATAACAGTGATATGATGATCTGCATTCATTTTCTAGGATTTTGTAGGACAACCATGTTGATCAAAGTAAATGATTTTGAATCTTCCAAAGTTCTTCGTTAGTTCTTGTTTTTGTATCGATTACCTTCCTGGGAATTTCATGAACACACAAAAAAGAGATGTTTCGATCAAAACTGCCACTGTGGAAAGCTGTTCTTTTCAGGATTGACAAACACCATGAATGGGAAACATAATATTATGAGTAATCATTCATTTTCTTGTTTCAGCATCTGGATATGTGGAAATGCGTAGACGACCAGAGACGAGGCGCGTGAGCGGTGATGATCTCGAGGATGATTTCAACATCGATGAAGATCATTTGCAGATGAAAGATGCAAAAGTGGAAAAGAAAAAGGGTCCCAAAGTTGTGAAGTTCATGGATTGAATTGAATGATAGCATAACATAGCATAGCTGTATGAGAAAAAGTGGGTAGTTTTGGAACATCACCCATTATTTACAACATTAATTGGTCAAATTTGAAGTAAATATGAGAGACATTTGTGTCTAAAATTGATGTAGTTTGGTAAAATTAAGGAGGTTTGTTATGTTGTGGAGCTTTGTTTAAGGAAGAGACGTGGATGAGGACATAATCAGCCATAGAAAACAATTGTGAGCCTTGGATTTGTCCCTCAAATTACTCCTCTTTACTCTCATCTCTCTCTCCCACAAAATAAGGATCTCTCCCTCTTACCTTTTCTCTTCTCTTCTCTCTTTTCTTATCCTCCCTTCTCCCTACGCCCATCTCTCTCCCCCTTTCCTACACTTCCACACGCAAAAATGGTAATTCCATCTCTCTCTCTCACACACACATCTTTCATGCCTAAGTGTTGTTTTTTCTAATCTTCTTTTGTTACTTGTTCTTAGTTTCTTGCACGTTCGTCCCCATTCTTATCACGTTAAATTACAATGTTGGATAAAAGTTAAGTCACCTATAATGTTGTATAAAAGTTTGAATCTTTAATAGATGGATATGAAATTTGTGTTTTTGTTGGCAATGATGAAATTAATTAATAGAATAAAAAAAAAATGAATTATAGAATGGATTGATGTGTGATTGTTATGGATTAGGCGAACGCTGCATCTGGAATGGCTGTGAGTGATGACTGTAAGCTCAAATTTTTGGAATTGAAAACGAAGAGGAACTATCGATTCATTGTATTCAAGATTGAGAATCAAGAAGTTGTTGTGGATAAGCTCGGGAGTCCTCAAAAAACTTATGATGATTTCCTTGCTGCCATTCCTTCTGATGAGTGTCGTTATGCTGTCTTTGACTTTGATTTCACCACTAACGAGAACTGCCAGAAAAGCAAGATTTTCTTCATAGCTTGGTAACATCCAATTTCTCCTCTATCTAATATTTATATTCCATCTCGTAATATTTAATGTTACCTTTCACCTTTCGAAAATTGAGACTATGAACACTACACATAGTTCTCGATGTTCTCGTATTTTGAAAACCTTTTTAATTATAGTTTTAGAAAATGTTTCTTAATTCTCATGACACCTTTGGATACATAACCGAACATTATGAAAAGACATTTATGATATTGGTAGCAATCCAATCAAACATTATCCAAAACATCATGACTTGATTGCCTTCTGGGGCTGTAAGGAGACAGAATTTCAACTTTTCCATCAAATTCTGTTACATAAATGAAACCTTAAAACTTGAAGACATACATATGAACTGAGGTTGTCTGTTTGTCTCTGTTTTGAAGGTCCCCCGACACATCGATAGTGAGAAATAAGATGGTTTATGCGAGCTCCAAGGACAGATTCAAGAGGGAATTGGATGGAATTCAGGTGGAACTGCAAGCCACAGATCCCAGCGAAATGAGCTTCGACATTATCAAAGCTCGAGCCTTTTAAGCTCACTTTTCCTCCATTTTTGAGTCTGCGGACAATTAACGTTGTGAACATTACTCTTTCACTTTCTTTTCCTTCATGCTTTGCCTTTTTCTTCATGGGGTTTCACTCATCTCCAAAGCTCTATTGATGATATGCTGTAATTCTCTATAGATAAATATATATAAAGTTCATTCTTTCACTC

mRNA sequence

ATGGTGAGCCAAAGGCAAAGACTTGCCCGGAAAAAGTACAGAGAAGAACACCCGGAACTGTTTCCGGAAGTAGAGCCAACGCCACCTAAAGACCCCGACAAGAAGAAGAAGAAGAGTAAATTCAAGCGCAAGAAGGCAGAATCGAACTCAACCAGAGACCCAAATAAACCGCACAAGAAGGGATTTAAGAAACACCCTCTTAGAGTGCCTGGGATGAAACCCGGAGAAAGCTGCTTCATCTGCAAGGCCAAAGACCACATTGCTAAGCTTTGCCCCGAAAAGGCTCAATGGGAGAAGAACAAGATATGCTTGCTTTGTCGGAGACGAGGGCACAGCCTCAAAAATTGCCCAGACAAAAATGAAAGGACTGTGGATAAGAAGTTATGCTATAACTGTGGTGAAACAGGACATTCACTGGCTAATTGTCCGCAGCCTCTTCAAGATGGAGGAACCAAATTCGCCAGTTGTTTTATTTGTAATGAAAGTGGACACTTAAGCAAAAACTGTCCGAAGAACACTCATGGGATCTACCCTAAGGGGGGAGGTTGTAAAACTTGTGGGGAAGTCACACATTTAGCTAAGGATTGTCCAAACAAAGCCACCCAATTTTCTGCTGGGGCTTATGATGCATCTGGATATGTGGAAATGCGTAGACGACCAGAGACGAGGCGCGTGAGCGGTGATGATCTCGAGGATGATTTCAACATCGATGAAGATCATTTGCAGATGAAAGATGCAAAAGTGGAAAAGAAAAAGGGTCCCAAAGCGAACGCTGCATCTGGAATGGCTGTGAGTGATGACTGTAAGCTCAAATTTTTGGAATTGAAAACGAAGAGGAACTATCGATTCATTGTATTCAAGATTGAGAATCAAGAAGTTGTTGTGGATAAGCTCGGGAGTCCTCAAAAAACTTATGATGATTTCCTTGCTGCCATTCCTTCTGATGAGTGTCGTTATGCTGTCTTTGACTTTGATTTCACCACTAACGAGAACTGCCAGAAAAGCAAGATTTTCTTCATAGCTTGGTCCCCCGACACATCGATAGTGAGAAATAAGATGGTTTATGCGAGCTCCAAGGACAGATTCAAGAGGGAATTGGATGGAATTCAGGTGGAACTGCAAGCCACAGATCCCAGCGAAATGAGCTTCGACATTATCAAAGCTCGAGCCTTTTAAGCTCACTTTTCCTCCATTTTTGAGTCTGCGGACAATTAACGTTGTGAACATTACTCTTTCACTTTCTTTTCCTTCATGCTTTGCCTTTTTCTTCATGGGGTTTCACTCATCTCCAAAGCTCTATTGATGATATGCTGTAATTCTCTATAGATAAATATATATAAAGTTCATTCTTTCACTC

Coding sequence (CDS)

ATGGTGAGCCAAAGGCAAAGACTTGCCCGGAAAAAGTACAGAGAAGAACACCCGGAACTGTTTCCGGAAGTAGAGCCAACGCCACCTAAAGACCCCGACAAGAAGAAGAAGAAGAGTAAATTCAAGCGCAAGAAGGCAGAATCGAACTCAACCAGAGACCCAAATAAACCGCACAAGAAGGGATTTAAGAAACACCCTCTTAGAGTGCCTGGGATGAAACCCGGAGAAAGCTGCTTCATCTGCAAGGCCAAAGACCACATTGCTAAGCTTTGCCCCGAAAAGGCTCAATGGGAGAAGAACAAGATATGCTTGCTTTGTCGGAGACGAGGGCACAGCCTCAAAAATTGCCCAGACAAAAATGAAAGGACTGTGGATAAGAAGTTATGCTATAACTGTGGTGAAACAGGACATTCACTGGCTAATTGTCCGCAGCCTCTTCAAGATGGAGGAACCAAATTCGCCAGTTGTTTTATTTGTAATGAAAGTGGACACTTAAGCAAAAACTGTCCGAAGAACACTCATGGGATCTACCCTAAGGGGGGAGGTTGTAAAACTTGTGGGGAAGTCACACATTTAGCTAAGGATTGTCCAAACAAAGCCACCCAATTTTCTGCTGGGGCTTATGATGCATCTGGATATGTGGAAATGCGTAGACGACCAGAGACGAGGCGCGTGAGCGGTGATGATCTCGAGGATGATTTCAACATCGATGAAGATCATTTGCAGATGAAAGATGCAAAAGTGGAAAAGAAAAAGGGTCCCAAAGCGAACGCTGCATCTGGAATGGCTGTGAGTGATGACTGTAAGCTCAAATTTTTGGAATTGAAAACGAAGAGGAACTATCGATTCATTGTATTCAAGATTGAGAATCAAGAAGTTGTTGTGGATAAGCTCGGGAGTCCTCAAAAAACTTATGATGATTTCCTTGCTGCCATTCCTTCTGATGAGTGTCGTTATGCTGTCTTTGACTTTGATTTCACCACTAACGAGAACTGCCAGAAAAGCAAGATTTTCTTCATAGCTTGGTCCCCCGACACATCGATAGTGAGAAATAAGATGGTTTATGCGAGCTCCAAGGACAGATTCAAGAGGGAATTGGATGGAATTCAGGTGGAACTGCAAGCCACAGATCCCAGCGAAATGAGCTTCGACATTATCAAAGCTCGAGCCTTTTAA

Protein sequence

MVSQRQRLARKKYREEHPELFPEVEPTPPKDPDKKKKKSKFKRKKAESNSTRDPNKPHKKGFKKHPLRVPGMKPGESCFICKAKDHIAKLCPEKAQWEKNKICLLCRRRGHSLKNCPDKNERTVDKKLCYNCGETGHSLANCPQPLQDGGTKFASCFICNESGHLSKNCPKNTHGIYPKGGGCKTCGEVTHLAKDCPNKATQFSAGAYDASGYVEMRRRPETRRVSGDDLEDDFNIDEDHLQMKDAKVEKKKGPKANAASGMAVSDDCKLKFLELKTKRNYRFIVFKIENQEVVVDKLGSPQKTYDDFLAAIPSDECRYAVFDFDFTTNENCQKSKIFFIAWSPDTSIVRNKMVYASSKDRFKRELDGIQVELQATDPSEMSFDIIKARAF

Homology

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BLAST of Carg15135 vs. NCBI nr
Match: KAG7014772.1 (Actin-depolymerizing factor 7, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 806.2 bits (2081), Expect = 1.2e-229
Identity = 391/391 (100.00%), Postives = 391/391 (100.00%), Query Frame = 0


Query: 1   MVSQRQRLARKKYREEHPELFPEVEPTPPKDPDKKKKKSKFKRKKAESNSTRDPNKPHKK 60
           MVSQRQRLARKKYREEHPELFPEVEPTPPKDPDKKKKKSKFKRKKAESNSTRDPNKPHKK
Sbjct: 1   MVSQRQRLARKKYREEHPELFPEVEPTPPKDPDKKKKKSKFKRKKAESNSTRDPNKPHKK 60

Query: 61  GFKKHPLRVPGMKPGESCFICKAKDHIAKLCPEKAQWEKNKICLLCRRRGHSLKNCPDKN 120
           GFKKHPLRVPGMKPGESCFICKAKDHIAKLCPEKAQWEKNKICLLCRRRGHSLKNCPDKN
Sbjct: 61  GFKKHPLRVPGMKPGESCFICKAKDHIAKLCPEKAQWEKNKICLLCRRRGHSLKNCPDKN 120

Query: 121 ERTVDKKLCYNCGETGHSLANCPQPLQDGGTKFASCFICNESGHLSKNCPKNTHGIYPKG 180
           ERTVDKKLCYNCGETGHSLANCPQPLQDGGTKFASCFICNESGHLSKNCPKNTHGIYPKG
Sbjct: 121 ERTVDKKLCYNCGETGHSLANCPQPLQDGGTKFASCFICNESGHLSKNCPKNTHGIYPKG 180

Query: 181 GGCKTCGEVTHLAKDCPNKATQFSAGAYDASGYVEMRRRPETRRVSGDDLEDDFNIDEDH 240
           GGCKTCGEVTHLAKDCPNKATQFSAGAYDASGYVEMRRRPETRRVSGDDLEDDFNIDEDH
Sbjct: 181 GGCKTCGEVTHLAKDCPNKATQFSAGAYDASGYVEMRRRPETRRVSGDDLEDDFNIDEDH 240

Query: 241 LQMKDAKVEKKKGPKANAASGMAVSDDCKLKFLELKTKRNYRFIVFKIENQEVVVDKLGS 300
           LQMKDAKVEKKKGPKANAASGMAVSDDCKLKFLELKTKRNYRFIVFKIENQEVVVDKLGS
Sbjct: 241 LQMKDAKVEKKKGPKANAASGMAVSDDCKLKFLELKTKRNYRFIVFKIENQEVVVDKLGS 300

Query: 301 PQKTYDDFLAAIPSDECRYAVFDFDFTTNENCQKSKIFFIAWSPDTSIVRNKMVYASSKD 360
           PQKTYDDFLAAIPSDECRYAVFDFDFTTNENCQKSKIFFIAWSPDTSIVRNKMVYASSKD
Sbjct: 301 PQKTYDDFLAAIPSDECRYAVFDFDFTTNENCQKSKIFFIAWSPDTSIVRNKMVYASSKD 360

Query: 361 RFKRELDGIQVELQATDPSEMSFDIIKARAF 392
           RFKRELDGIQVELQATDPSEMSFDIIKARAF
Sbjct: 361 RFKRELDGIQVELQATDPSEMSFDIIKARAF 391

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BLAST of Carg15135 vs. NCBI nr
Match: XP_023552826.1 (uncharacterized protein LOC111810346 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 761.9 bits (1966), Expect = 2.7e-216
Identity = 383/436 (87.84%), Postives = 388/436 (88.99%), Query Frame = 0


Query: 1   MVSQRQRLARKKYREEHPELFPEVEPTPPKDPD-KKKKKSKFKRKKAESNSTRDPNKPHK 60
           MVSQRQRLARKKYREEHPELFPE EPTPPKDPD KKKKKSKFKRKKAESNSTRDPNKPHK
Sbjct: 1   MVSQRQRLARKKYREEHPELFPEAEPTPPKDPDKKKKKKSKFKRKKAESNSTRDPNKPHK 60

Query: 61  KGFKKHPLRVPGMKPGESCFICKAKDHIAKLCPEKAQWEKNKICLLCRRRGHSLKNCPDK 120
           KGFKKHPLRVPGMKPGESCFICKAKDHIAKLCPEKAQWEKNKICLLCRRRGHSLKNCPDK
Sbjct: 61  KGFKKHPLRVPGMKPGESCFICKAKDHIAKLCPEKAQWEKNKICLLCRRRGHSLKNCPDK 120

Query: 121 NERTVDKKLCYNCGETGHSLANCPQPLQDGGTKFASCFICNESGHLSKNCPKNTHGIYPK 180
           NERTVDKKLCYNCGETGHSLANCPQPLQDGGTKFASCFICNESGHLSKNCPKNTHGIYPK
Sbjct: 121 NERTVDKKLCYNCGETGHSLANCPQPLQDGGTKFASCFICNESGHLSKNCPKNTHGIYPK 180

Query: 181 GGGCKTCGEVTHLAKDCPNKATQFSAGAYD---ASGYVEMRRRPETRRVSGDDLEDDFNI 240
           GG CKTCGEVTHLAKDCPNKATQFS GAYD   +SGYVEMRRRPETRRVSGDDLEDDFN+
Sbjct: 181 GGCCKTCGEVTHLAKDCPNKATQFSGGAYDGNRSSGYVEMRRRPETRRVSGDDLEDDFNM 240

Query: 241 DEDHLQMKDAKVEKKKGPK----------------------------------------- 300
           DEDHLQMKDAKVEKKKGPK                                         
Sbjct: 241 DEDHLQMKDAKVEKKKGPKVVKFMDDLSLLPFLFSSLFSYPPFSLRPSLSPFPTLPHAKM 300

Query: 301 ANAASGMAVSDDCKLKFLELKTKRNYRFIVFKIENQEVVVDKLGSPQKTYDDFLAAIPSD 360
           ANAASGMAVSD+CKLKFLELKTKRNYRFIVFKIENQEVVVDKLGSPQKTYDDFLAAIPS+
Sbjct: 301 ANAASGMAVSDECKLKFLELKTKRNYRFIVFKIENQEVVVDKLGSPQKTYDDFLAAIPSN 360

Query: 361 ECRYAVFDFDFTTNENCQKSKIFFIAWSPDTSIVRNKMVYASSKDRFKRELDGIQVELQA 392
           ECRYAVFDFDFTT+ENCQKSKIFFIAWSPDTSIVRNKMVYASSKDRFKRELDGIQVELQA
Sbjct: 361 ECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSIVRNKMVYASSKDRFKRELDGIQVELQA 420

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BLAST of Carg15135 vs. NCBI nr
Match: XP_022985102.1 (uncharacterized protein LOC111483178 [Cucurbita maxima])

HSP 1 Score: 740.7 bits (1911), Expect = 6.4e-210
Identity = 378/462 (81.82%), Postives = 383/462 (82.90%), Query Frame = 0


Query: 1   MVSQRQRLARKKYREEHPELFPEVEPTPPKDPD--KKKKKSKFKRKKAESNSTRDPNKPH 60
           MVSQRQRLARKKYREEHPELFPE EPTPPKDPD  KKKKKSKFKRKKAESNST DPNKPH
Sbjct: 1   MVSQRQRLARKKYREEHPELFPEAEPTPPKDPDKKKKKKKSKFKRKKAESNSTSDPNKPH 60

Query: 61  KKGFKKHPLRVPGMKPGESCFICKAKDHIAKLCPEKAQWEKNKICLLCRRRGHSLKNCPD 120
           KK FKKHPLRV GMKPGESCFICKAKDHIAKLCPEKAQWEKNKICLLCRRRGHSLKNCPD
Sbjct: 61  KKSFKKHPLRVTGMKPGESCFICKAKDHIAKLCPEKAQWEKNKICLLCRRRGHSLKNCPD 120

Query: 121 KNERTVDKKLCYNCGETGHSLANCPQPLQDGGTKFASCFICNESGHLSKNCPKNTHGIYP 180
           KNERTVDKKLCYNCGETGHSLANCPQPLQDGGTKFASCFICNESGHLSKNCPKNTHGIYP
Sbjct: 121 KNERTVDKKLCYNCGETGHSLANCPQPLQDGGTKFASCFICNESGHLSKNCPKNTHGIYP 180

Query: 181 KGGGCKTCGEVTHLAKDCPNKATQFSAGAYD---ASGYVEMRRRPETRRVSGDDLEDDFN 240
           KGG CKTCGEVTHLAKDCPNKATQFS GAYD   +SGYVEM RRPETRRVSGDDLEDDFN
Sbjct: 181 KGGCCKTCGEVTHLAKDCPNKATQFSGGAYDGNKSSGYVEMHRRPETRRVSGDDLEDDFN 240

Query: 241 IDEDHLQMKDAKVEKKKGPK---------------------------------------- 300
           IDEDHLQMKDAKVEKKKGP+                                        
Sbjct: 241 IDEDHLQMKDAKVEKKKGPRVVQFMDKTIVSLGFVPQITLLYSDLSLPQNKDLSLLPSLF 300

Query: 301 --------------------------ANAASGMAVSDDCKLKFLELKTKRNYRFIVFKIE 360
                                     ANAASGMAVSD+CKLKFLELKTKRNYRFIVFKIE
Sbjct: 301 SSLFSYPPFSLRPSLSPFRTLPHAKMANAASGMAVSDECKLKFLELKTKRNYRFIVFKIE 360

Query: 361 NQEVVVDKLGSPQKTYDDFLAAIPSDECRYAVFDFDFTTNENCQKSKIFFIAWSPDTSIV 392
           NQEVVVDKLGSPQKTYDDFLAAIPSDECRYAVFD DFTT+ENCQKSKIFFIAWSPDTSIV
Sbjct: 361 NQEVVVDKLGSPQKTYDDFLAAIPSDECRYAVFDLDFTTDENCQKSKIFFIAWSPDTSIV 420

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BLAST of Carg15135 vs. NCBI nr
Match: KAA0033654.1 (zinc finger CCHC domain-containing protein 9 [Cucumis melo var. makuwa])

HSP 1 Score: 711.4 bits (1835), Expect = 4.1e-201
Identity = 353/413 (85.47%), Postives = 367/413 (88.86%), Query Frame = 0


Query: 1   MVSQRQRLARKKYREEHPELFPEVEPTPPKDPDKKKKKSKFKRKKAESNSTRDPNKPHKK 60
           MVSQRQRLARKKYRE HPELFP+ EPTPPKDPD KKKKSKFKRKK ESNS RDPNKPHKK
Sbjct: 1   MVSQRQRLARKKYREGHPELFPKAEPTPPKDPD-KKKKSKFKRKKGESNSNRDPNKPHKK 60

Query: 61  GFKKHPLRVPGMKPGESCFICKAKDHIAKLCPEKAQWEKNK------------------I 120
           GFKKHPLRVPGMKPGESCFICKAKDHIAKLCPEKAQWEKNK                  I
Sbjct: 61  GFKKHPLRVPGMKPGESCFICKAKDHIAKLCPEKAQWEKNKVCLSGLPFVLLEFHCLLDI 120

Query: 121 CLLCRRRGHSLKNCPDKNERTVDKKLCYNCGETGHSLANCPQPLQDGGTKFASCFICNES 180
           CLLCRRRGHSLKNCPDKNE T+DKKLCYNCGETGHSLANCPQPLQDGGTKFASCFICNES
Sbjct: 121 CLLCRRRGHSLKNCPDKNEGTMDKKLCYNCGETGHSLANCPQPLQDGGTKFASCFICNES 180

Query: 181 GHLSKNCPKNTHGIYPKGGGCKTCGEVTHLAKDCPNKATQF----SAGAYDASGYVEMRR 240
           GHLSKNCPKNTHGIYPKGG CKTCGEVTHLAKDCP K TQ         Y +SGYVEM R
Sbjct: 181 GHLSKNCPKNTHGIYPKGGCCKTCGEVTHLAKDCPKKGTQVFDRAGVSGYRSSGYVEMPR 240

Query: 241 RPETRRVSGDDLEDDFNIDEDHLQMKDAKVEKKKGPKANAASGMAVSDDCKLKFLELKTK 300
           RPET+ VSGDDLEDDF IDED LQ+KDAK+ KKKGPKANAASGMAV D+CKLKFLELK K
Sbjct: 241 RPETKLVSGDDLEDDFMIDEDRLQIKDAKMGKKKGPKANAASGMAVRDECKLKFLELKAK 300

Query: 301 RNYRFIVFKIENQEVVVDKLGSPQKTYDDFLAAIPSDECRYAVFDFDFTTNENCQKSKIF 360
           RNYRFI+FKIENQEVVV+KLGSP++TYDDF AAIP++ECRYAVFDFDFTT+ENCQKSKIF
Sbjct: 301 RNYRFIIFKIENQEVVVEKLGSPEETYDDFTAAIPANECRYAVFDFDFTTDENCQKSKIF 360

Query: 361 FIAWSPDTSIVRNKMVYASSKDRFKRELDGIQVELQATDPSEMSFDIIKARAF 392
           FIAWSPDTS VRNKMVYASSKDRFKRELDGIQVELQATDPSEMSFDIIKARAF
Sbjct: 361 FIAWSPDTSKVRNKMVYASSKDRFKRELDGIQVELQATDPSEMSFDIIKARAF 412

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BLAST of Carg15135 vs. NCBI nr
Match: XP_038886312.1 (uncharacterized protein LOC120076526 [Benincasa hispida])

HSP 1 Score: 702.2 bits (1811), Expect = 2.5e-198
Identity = 351/445 (78.88%), Postives = 370/445 (83.15%), Query Frame = 0


Query: 1   MVSQRQRLARKKYREEHPELFPEVEPTPPKDPDKKKKKSKFKRKKAESNSTRDPNKPHKK 60
           MVSQRQRLARKKYREEHPELFP+ EPTPPKDPDKKKKKSKFKRKK ES S RD NKP+KK
Sbjct: 1   MVSQRQRLARKKYREEHPELFPKAEPTPPKDPDKKKKKSKFKRKKEESISNRDANKPYKK 60

Query: 61  GFKKHPLRVPGMKPGESCFICKAKDHIAKLCPEKAQWEKNKICLLCRRRGHSLKNCPDKN 120
           GFKKHPLRVPGMKPGESCFICKAKDHIAKLCPEKAQWEKNKICLLCRRRGHSLKNCPDKN
Sbjct: 61  GFKKHPLRVPGMKPGESCFICKAKDHIAKLCPEKAQWEKNKICLLCRRRGHSLKNCPDKN 120

Query: 121 ERTVDKKLCYNCGETGHSLANCPQPLQDGGTKFASCFICNESGHLSKNCPKNTHGIYPKG 180
           E T+DKKLCYNCGETGHSLANCPQP+QDGGTKFASCFICNESGHLSKNCPKNTHGIYPKG
Sbjct: 121 EGTLDKKLCYNCGETGHSLANCPQPIQDGGTKFASCFICNESGHLSKNCPKNTHGIYPKG 180

Query: 181 GGCKTCGEVTHLAKDCPNKATQ----FSAGAYDASGYVEMRRRPETRRVSGDDLEDDFNI 240
           GGCKTCGEVTHLAKDCPNK TQ         Y +SGYVEM RRPET+R+SGDDLEDDF  
Sbjct: 181 GGCKTCGEVTHLAKDCPNKGTQVIDRVGESGYRSSGYVEMPRRPETKRISGDDLEDDFMS 240

Query: 241 DEDHLQMKDAKVEKKKGPK----------------------------------------- 300
           DED LQ+KDAK+ KKKGPK                                         
Sbjct: 241 DEDRLQIKDAKMGKKKGPKVVRFEGMKNTNGSLHLSHFSSSLFFHYSSPPFFPTPISLPF 300

Query: 301 ---------ANAASGMAVSDDCKLKFLELKTKRNYRFIVFKIENQEVVVDKLGSPQKTYD 360
                    AN+ASGMAV D+CKLKFLELKTKRNYRFI+FKIENQEVVV+KLGSP++TY+
Sbjct: 301 LSHSSYTKMANSASGMAVRDECKLKFLELKTKRNYRFIIFKIENQEVVVEKLGSPEETYE 360

Query: 361 DFLAAIPSDECRYAVFDFDFTTNENCQKSKIFFIAWSPDTSIVRNKMVYASSKDRFKREL 392
           DF AAIP++ECRYAVFDFDFTT+ENCQKSKIFFIAWSPDTS VRNKMVYASSKDRFKREL
Sbjct: 361 DFTAAIPANECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSKVRNKMVYASSKDRFKREL 420

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BLAST of Carg15135 vs. ExPASy Swiss-Prot
Match: Q67ZM4 (Actin-depolymerizing factor 7 OS=Arabidopsis thaliana OX=3702 GN=ADF7 PE=2 SV=1)

HSP 1 Score: 236.1 bits (601), Expect = 6.7e-61
Identity = 112/135 (82.96%), Postives = 128/135 (94.81%), Query Frame = 0


Query: 256 ANAASGMAVSDDCKLKFLELKTKRNYRFIVFKIENQEVVVDKLGSPQKTYDDFLAAIPSD 315
           ANAASGMAV D+CKLKFLELK+KRNYRFI+F+I+ Q+VVV+KLG+P +TYDDF A++P++
Sbjct: 2   ANAASGMAVEDECKLKFLELKSKRNYRFIIFRIDGQQVVVEKLGNPDETYDDFTASLPAN 61

Query: 316 ECRYAVFDFDFTTNENCQKSKIFFIAWSPDTSIVRNKMVYASSKDRFKRELDGIQVELQA 375
           ECRYAVFDFDF T+ENCQKSKIFFIAWSPD+S VR KMVYASSKDRFKRELDGIQVELQA
Sbjct: 62  ECRYAVFDFDFITDENCQKSKIFFIAWSPDSSRVRMKMVYASSKDRFKRELDGIQVELQA 121

Query: 376 TDPSEMSFDIIKARA 391
           TDPSEMSFDIIK+RA
Sbjct: 122 TDPSEMSFDIIKSRA 136

[Close]

BLAST of Carg15135 vs. ExPASy Swiss-Prot
Match: Q8LFH6 (Actin-depolymerizing factor 12 OS=Arabidopsis thaliana OX=3702 GN=ADF12 PE=2 SV=2)

HSP 1 Score: 226.5 bits (576), Expect = 5.3e-58
Identity = 110/135 (81.48%), Postives = 122/135 (90.37%), Query Frame = 0


Query: 256 ANAASGMAVSDDCKLKFLELKTKRNYRFIVFKIENQEVVVDKLGSPQKTYDDFLAAIPSD 315
           ANAASGMAV D+CKLKFLELK KRNYRFI+F+I+ Q+VVV+KLGSPQ+ YDDF   +P +
Sbjct: 2   ANAASGMAVEDECKLKFLELKAKRNYRFIIFRIDGQQVVVEKLGSPQENYDDFTNYLPPN 61

Query: 316 ECRYAVFDFDFTTNENCQKSKIFFIAWSPDTSIVRNKMVYASSKDRFKRELDGIQVELQA 375
           ECRYAV+DFDFTT EN QKSKIFFIAWSPD+S VR KMVYASSKDRFKRELDGIQVELQA
Sbjct: 62  ECRYAVYDFDFTTAENIQKSKIFFIAWSPDSSRVRMKMVYASSKDRFKRELDGIQVELQA 121

Query: 376 TDPSEMSFDIIKARA 391
           TDPSEMS DIIK+RA
Sbjct: 122 TDPSEMSLDIIKSRA 136

[Close]

BLAST of Carg15135 vs. ExPASy Swiss-Prot
Match: Q9LQ81 (Actin-depolymerizing factor 10 OS=Arabidopsis thaliana OX=3702 GN=ADF10 PE=2 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 6.9e-58
Identity = 109/136 (80.15%), Postives = 124/136 (91.18%), Query Frame = 0


Query: 256 ANAASGMAVSDDCKLKFLELKTKRNYRFIVFKIEN--QEVVVDKLGSPQKTYDDFLAAIP 315
           AN+ASGM VSD+CKLKFLELK KRNYRFIVFKI+   Q+V++DKLG+P++TY+DF  +IP
Sbjct: 2   ANSASGMHVSDECKLKFLELKAKRNYRFIVFKIDEKAQQVMIDKLGNPEETYEDFTRSIP 61

Query: 316 SDECRYAVFDFDFTTNENCQKSKIFFIAWSPDTSIVRNKMVYASSKDRFKRELDGIQVEL 375
            DECRYAV+D+DFTT ENCQKSKIFFIAWSPDTS VR+KM+YASSKDRFKRELDGIQVEL
Sbjct: 62  EDECRYAVYDYDFTTPENCQKSKIFFIAWSPDTSRVRSKMLYASSKDRFKRELDGIQVEL 121

Query: 376 QATDPSEMSFDIIKAR 390
           QATDPSEMS DIIK R
Sbjct: 122 QATDPSEMSLDIIKGR 137

[Close]

BLAST of Carg15135 vs. ExPASy Swiss-Prot
Match: P30175 (Actin-depolymerizing factor OS=Lilium longiflorum OX=4690 PE=2 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 1.3e-56
Identity = 106/138 (76.81%), Postives = 123/138 (89.13%), Query Frame = 0


Query: 256 ANAASGMAVSDDCKLKFLELKTKRNYRFIVFKIEN--QEVVVDKLGSPQKTYDDFLAAIP 315
           AN++SGMAV D+CKLKF+ELK KRN+RFIVFKIE   Q+V V++LG P ++YDDF   +P
Sbjct: 2   ANSSSGMAVDDECKLKFMELKAKRNFRFIVFKIEEKVQQVTVERLGQPNESYDDFTECLP 61

Query: 316 SDECRYAVFDFDFTTNENCQKSKIFFIAWSPDTSIVRNKMVYASSKDRFKRELDGIQVEL 375
            +ECRYAVFDFDF T+ENCQKSKIFFI+WSPDTS VR+KM+YAS+KDRFKRELDGIQVEL
Sbjct: 62  PNECRYAVFDFDFVTDENCQKSKIFFISWSPDTSRVRSKMLYASTKDRFKRELDGIQVEL 121

Query: 376 QATDPSEMSFDIIKARAF 392
           QATDPSEMS DIIKARAF
Sbjct: 122 QATDPSEMSMDIIKARAF 139

[Close]

BLAST of Carg15135 vs. ExPASy Swiss-Prot
Match: Q6EUH7 (Actin-depolymerizing factor 1 OS=Oryza sativa subsp. japonica OX=39947 GN=ADF1 PE=2 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 1.7e-56
Identity = 106/137 (77.37%), Postives = 124/137 (90.51%), Query Frame = 0


Query: 256 ANAASGMAVSDDCKLKFLELKTKRNYRFIVFKIEN--QEVVVDKLGSPQKTYDDFLAAIP 315
           +N+ASGMAV D+CKLKFLELK KR++RFIVFKI    Q+VVVD+LG P ++YDDF A +P
Sbjct: 2   SNSASGMAVCDECKLKFLELKAKRSFRFIVFKINEKVQQVVVDRLGQPGESYDDFTACLP 61

Query: 316 SDECRYAVFDFDFTTNENCQKSKIFFIAWSPDTSIVRNKMVYASSKDRFKRELDGIQVEL 375
           +DECRYAVFDFDF T+ENCQKSKIFFI+W+PDTS VR+KM+YASSKDRFKRELDGIQVEL
Sbjct: 62  ADECRYAVFDFDFVTDENCQKSKIFFISWAPDTSRVRSKMLYASSKDRFKRELDGIQVEL 121

Query: 376 QATDPSEMSFDIIKARA 391
           QATDPSEMS DI+K+RA
Sbjct: 122 QATDPSEMSMDIVKSRA 138

[Close]

BLAST of Carg15135 vs. ExPASy TrEMBL
Match: A0A6J1J3Y1 (uncharacterized protein LOC111483178 OS=Cucurbita maxima OX=3661 GN=LOC111483178 PE=3 SV=1)

HSP 1 Score: 740.7 bits (1911), Expect = 3.1e-210
Identity = 378/462 (81.82%), Postives = 383/462 (82.90%), Query Frame = 0


Query: 1   MVSQRQRLARKKYREEHPELFPEVEPTPPKDPD--KKKKKSKFKRKKAESNSTRDPNKPH 60
           MVSQRQRLARKKYREEHPELFPE EPTPPKDPD  KKKKKSKFKRKKAESNST DPNKPH
Sbjct: 1   MVSQRQRLARKKYREEHPELFPEAEPTPPKDPDKKKKKKKSKFKRKKAESNSTSDPNKPH 60

Query: 61  KKGFKKHPLRVPGMKPGESCFICKAKDHIAKLCPEKAQWEKNKICLLCRRRGHSLKNCPD 120
           KK FKKHPLRV GMKPGESCFICKAKDHIAKLCPEKAQWEKNKICLLCRRRGHSLKNCPD
Sbjct: 61  KKSFKKHPLRVTGMKPGESCFICKAKDHIAKLCPEKAQWEKNKICLLCRRRGHSLKNCPD 120

Query: 121 KNERTVDKKLCYNCGETGHSLANCPQPLQDGGTKFASCFICNESGHLSKNCPKNTHGIYP 180
           KNERTVDKKLCYNCGETGHSLANCPQPLQDGGTKFASCFICNESGHLSKNCPKNTHGIYP
Sbjct: 121 KNERTVDKKLCYNCGETGHSLANCPQPLQDGGTKFASCFICNESGHLSKNCPKNTHGIYP 180

Query: 181 KGGGCKTCGEVTHLAKDCPNKATQFSAGAYD---ASGYVEMRRRPETRRVSGDDLEDDFN 240
           KGG CKTCGEVTHLAKDCPNKATQFS GAYD   +SGYVEM RRPETRRVSGDDLEDDFN
Sbjct: 181 KGGCCKTCGEVTHLAKDCPNKATQFSGGAYDGNKSSGYVEMHRRPETRRVSGDDLEDDFN 240

Query: 241 IDEDHLQMKDAKVEKKKGPK---------------------------------------- 300
           IDEDHLQMKDAKVEKKKGP+                                        
Sbjct: 241 IDEDHLQMKDAKVEKKKGPRVVQFMDKTIVSLGFVPQITLLYSDLSLPQNKDLSLLPSLF 300

Query: 301 --------------------------ANAASGMAVSDDCKLKFLELKTKRNYRFIVFKIE 360
                                     ANAASGMAVSD+CKLKFLELKTKRNYRFIVFKIE
Sbjct: 301 SSLFSYPPFSLRPSLSPFRTLPHAKMANAASGMAVSDECKLKFLELKTKRNYRFIVFKIE 360

Query: 361 NQEVVVDKLGSPQKTYDDFLAAIPSDECRYAVFDFDFTTNENCQKSKIFFIAWSPDTSIV 392
           NQEVVVDKLGSPQKTYDDFLAAIPSDECRYAVFD DFTT+ENCQKSKIFFIAWSPDTSIV
Sbjct: 361 NQEVVVDKLGSPQKTYDDFLAAIPSDECRYAVFDLDFTTDENCQKSKIFFIAWSPDTSIV 420

[Close]

BLAST of Carg15135 vs. ExPASy TrEMBL
Match: A0A5A7SR44 (Zinc finger CCHC domain-containing protein 9 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold239G001180 PE=3 SV=1)

HSP 1 Score: 711.4 bits (1835), Expect = 2.0e-201
Identity = 353/413 (85.47%), Postives = 367/413 (88.86%), Query Frame = 0


Query: 1   MVSQRQRLARKKYREEHPELFPEVEPTPPKDPDKKKKKSKFKRKKAESNSTRDPNKPHKK 60
           MVSQRQRLARKKYRE HPELFP+ EPTPPKDPD KKKKSKFKRKK ESNS RDPNKPHKK
Sbjct: 1   MVSQRQRLARKKYREGHPELFPKAEPTPPKDPD-KKKKSKFKRKKGESNSNRDPNKPHKK 60

Query: 61  GFKKHPLRVPGMKPGESCFICKAKDHIAKLCPEKAQWEKNK------------------I 120
           GFKKHPLRVPGMKPGESCFICKAKDHIAKLCPEKAQWEKNK                  I
Sbjct: 61  GFKKHPLRVPGMKPGESCFICKAKDHIAKLCPEKAQWEKNKVCLSGLPFVLLEFHCLLDI 120

Query: 121 CLLCRRRGHSLKNCPDKNERTVDKKLCYNCGETGHSLANCPQPLQDGGTKFASCFICNES 180
           CLLCRRRGHSLKNCPDKNE T+DKKLCYNCGETGHSLANCPQPLQDGGTKFASCFICNES
Sbjct: 121 CLLCRRRGHSLKNCPDKNEGTMDKKLCYNCGETGHSLANCPQPLQDGGTKFASCFICNES 180

Query: 181 GHLSKNCPKNTHGIYPKGGGCKTCGEVTHLAKDCPNKATQF----SAGAYDASGYVEMRR 240
           GHLSKNCPKNTHGIYPKGG CKTCGEVTHLAKDCP K TQ         Y +SGYVEM R
Sbjct: 181 GHLSKNCPKNTHGIYPKGGCCKTCGEVTHLAKDCPKKGTQVFDRAGVSGYRSSGYVEMPR 240

Query: 241 RPETRRVSGDDLEDDFNIDEDHLQMKDAKVEKKKGPKANAASGMAVSDDCKLKFLELKTK 300
           RPET+ VSGDDLEDDF IDED LQ+KDAK+ KKKGPKANAASGMAV D+CKLKFLELK K
Sbjct: 241 RPETKLVSGDDLEDDFMIDEDRLQIKDAKMGKKKGPKANAASGMAVRDECKLKFLELKAK 300

Query: 301 RNYRFIVFKIENQEVVVDKLGSPQKTYDDFLAAIPSDECRYAVFDFDFTTNENCQKSKIF 360
           RNYRFI+FKIENQEVVV+KLGSP++TYDDF AAIP++ECRYAVFDFDFTT+ENCQKSKIF
Sbjct: 301 RNYRFIIFKIENQEVVVEKLGSPEETYDDFTAAIPANECRYAVFDFDFTTDENCQKSKIF 360

Query: 361 FIAWSPDTSIVRNKMVYASSKDRFKRELDGIQVELQATDPSEMSFDIIKARAF 392
           FIAWSPDTS VRNKMVYASSKDRFKRELDGIQVELQATDPSEMSFDIIKARAF
Sbjct: 361 FIAWSPDTSKVRNKMVYASSKDRFKRELDGIQVELQATDPSEMSFDIIKARAF 412

[Close]

BLAST of Carg15135 vs. ExPASy TrEMBL
Match: A0A6J1E8U1 (ATP-dependent RNA helicase glh-2-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111430474 PE=3 SV=1)

HSP 1 Score: 690.6 bits (1781), Expect = 3.7e-195
Identity = 345/391 (88.24%), Postives = 348/391 (89.00%), Query Frame = 0


Query: 1   MVSQRQRLARKKYREEHPELFPEVEPTPPKDPDKKKKKSKFKRKKAESNSTRDPNKPHKK 60
           MVSQRQRLARKKYREEHPELFPEVEPTPPKDPDKKKKKSKFKRKKAESNSTRDPNKPHKK
Sbjct: 1   MVSQRQRLARKKYREEHPELFPEVEPTPPKDPDKKKKKSKFKRKKAESNSTRDPNKPHKK 60

Query: 61  GFKKHPLRVPGMKPGESCFICKAKDHIAKLCPEKAQWEKNKICLLCRRRGHSLKNCPDKN 120
           GFKKHPLRVPGMKPGESCFICKAKDHIAKLCPEKAQWEKNKICLLCRRRGHSLKNCPDKN
Sbjct: 61  GFKKHPLRVPGMKPGESCFICKAKDHIAKLCPEKAQWEKNKICLLCRRRGHSLKNCPDKN 120

Query: 121 ERTVDKKLCYNCGETGHSLANCPQPLQDGGTKFASCFICNESGHLSKNCPKNTHGIYPKG 180
           ERTVDKKLCYNCGETGHSLANCPQPLQDGGTKFASCFICNESGHLSKNCPKNTHGIYPKG
Sbjct: 121 ERTVDKKLCYNCGETGHSLANCPQPLQDGGTKFASCFICNESGHLSKNCPKNTHGIYPKG 180

Query: 181 GGCKTCGEVTHLAKDCPNKATQFSAGAYDASGYVEMRRRPETRRVSGDDLEDDFNIDEDH 240
           G CKTCGEVTHLAKDCPNKATQFSAGAYD +            R SG             
Sbjct: 181 GCCKTCGEVTHLAKDCPNKATQFSAGAYDGN------------RSSG------------- 240

Query: 241 LQMKDAKVEKKKGPKANAASGMAVSDDCKLKFLELKTKRNYRFIVFKIENQEVVVDKLGS 300
                          ANAASGMAVSD+CKLKFLELKTKRNYRFIVFKIENQEVVVDKLGS
Sbjct: 241 --------------YANAASGMAVSDECKLKFLELKTKRNYRFIVFKIENQEVVVDKLGS 300

Query: 301 PQKTYDDFLAAIPSDECRYAVFDFDFTTNENCQKSKIFFIAWSPDTSIVRNKMVYASSKD 360
           PQKTYDDFLAAIPSDECRYAVFDFDFTT+ENCQKSKIFFIAWSPDTSIVRNKMVYASSKD
Sbjct: 301 PQKTYDDFLAAIPSDECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSIVRNKMVYASSKD 352

Query: 361 RFKRELDGIQVELQATDPSEMSFDIIKARAF 392
           RFKRELDGIQVELQATDPSEMSFDIIKARAF
Sbjct: 361 RFKRELDGIQVELQATDPSEMSFDIIKARAF 352

[Close]

BLAST of Carg15135 vs. ExPASy TrEMBL
Match: A0A1S3AY90 (LOW QUALITY PROTEIN: uncharacterized protein LOC103484078 OS=Cucumis melo OX=3656 GN=LOC103484078 PE=3 SV=1)

HSP 1 Score: 689.1 bits (1777), Expect = 1.1e-194
Identity = 344/392 (87.76%), Postives = 357/392 (91.07%), Query Frame = 0


Query: 1   MVSQRQRLARKKYREEHPELFPEVEPTPPKDPDKKKKKSKFKRKKAESNSTRDPNKPHKK 60
           MVSQRQRLARKKYRE HPELFP+ EPTPPKDPD KKKKSKFKRKK ESNS RDPNKPHKK
Sbjct: 1   MVSQRQRLARKKYREGHPELFPKAEPTPPKDPD-KKKKSKFKRKKGESNSNRDPNKPHKK 60

Query: 61  GFKKHPLRVPGMKPGESCFICKAKDHIAKLCPEKAQWEKNKICLLCRRRGHSLKNCPDKN 120
           GFKKHPLRVPGMKPGESCFICKAKDHIAKLCPEKAQWEKNKICLLCRRRGHSLKNCPDKN
Sbjct: 61  GFKKHPLRVPGMKPGESCFICKAKDHIAKLCPEKAQWEKNKICLLCRRRGHSLKNCPDKN 120

Query: 121 ERTVDKKLCYNCGETGHSLANCPQPLQDGGTKFASCFICNESGHLSKNCPKNTHGIYPKG 180
           E T+DKKLCYNCGETGHSLANCPQPLQDGGTKFASCFICNESGHLSKNCPKNTHGIYPKG
Sbjct: 121 EGTMDKKLCYNCGETGHSLANCPQPLQDGGTKFASCFICNESGHLSKNCPKNTHGIYPKG 180

Query: 181 GGCKTCGEVTHLAKDCPNKATQFSAGAYDASGYVEMRRRPETRRVSGDDLEDDFNIDEDH 240
           G CKTCGEVTHLAKDCP K TQ    A  ASGYVEM RRPET+ VSGDDLEDDF IDED 
Sbjct: 181 GCCKTCGEVTHLAKDCPKKGTQVFDRA--ASGYVEMPRRPETKLVSGDDLEDDFMIDEDQ 240

Query: 241 L-QMKDAKVEKKKGPKANAASGMAVSDDCKLKFLELKTKRNYRFIVFKIENQEVVVDKLG 300
             + +D  V       ANAASGMAV D+CKLKFLELK KRNYRFI+FKIENQEVVV+KLG
Sbjct: 241 KNKWRDILVVMN---XANAASGMAVRDECKLKFLELKAKRNYRFIIFKIENQEVVVEKLG 300

Query: 301 SPQKTYDDFLAAIPSDECRYAVFDFDFTTNENCQKSKIFFIAWSPDTSIVRNKMVYASSK 360
           SP++TYDDF AAIP++ECRYAVFDFDFTT+ENCQKSKIFFIAWSPDTS VRNKMVYASSK
Sbjct: 301 SPEETYDDFTAAIPANECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSKVRNKMVYASSK 360

Query: 361 DRFKRELDGIQVELQATDPSEMSFDIIKARAF 392
           DRFKRELDGIQVELQATDPSEMSFDIIKARAF
Sbjct: 361 DRFKRELDGIQVELQATDPSEMSFDIIKARAF 386

[Close]

BLAST of Carg15135 vs. ExPASy TrEMBL
Match: A0A6J1HYC2 (uncharacterized protein LOC111467373 OS=Cucurbita maxima OX=3661 GN=LOC111467373 PE=3 SV=1)

HSP 1 Score: 671.8 bits (1732), Expect = 1.8e-189
Identity = 344/482 (71.37%), Postives = 365/482 (75.73%), Query Frame = 0


Query: 1   MVSQRQRLARKKYREEHPELFPEVEPTPPKDPDKKKKKSKFKRKKAESNSTRDPNKPHKK 60
           MVS+RQ+LARKKYREEHPELFP+ EPTPPKDP+KKKKKS+FKRKK ES+S  DPNKPHKK
Sbjct: 1   MVSRRQKLARKKYREEHPELFPKAEPTPPKDPEKKKKKSEFKRKKGESDSRNDPNKPHKK 60

Query: 61  GFKKHPLRVPGMKPGESCFICKAKDHIAKLCPEKAQWEKNKICLLCRRRGHSLKNCPDKN 120
           GFKKHPLRVPGMKPGESCFICKAKDHIAK CPEKAQWEKNKICLLCRRRGHSLKNCPDK 
Sbjct: 61  GFKKHPLRVPGMKPGESCFICKAKDHIAKFCPEKAQWEKNKICLLCRRRGHSLKNCPDKT 120

Query: 121 ERTVDKKLCYNCGETGHSLANCPQPLQDGGTKFASCFICNESGHLSKNCPKNTHGIYPKG 180
           E TVDKKLCYNCGETGHSLANCPQPLQ GGTK+A+CFICNESGHLSKNCPKNTHGIYPKG
Sbjct: 121 EDTVDKKLCYNCGETGHSLANCPQPLQHGGTKYANCFICNESGHLSKNCPKNTHGIYPKG 180

Query: 181 GGCKTCGEVTHLAKDCPNKATQFSAG----AYDASGYVEMRRRPETRRVSGDDLEDDFNI 240
           G CKTCGEVTHLAKDCP K TQ  AG    +  +SGYVEM RRPETR VSGDDLEDDF +
Sbjct: 181 GCCKTCGEVTHLAKDCPKKGTQVYAGPGVSSNRSSGYVEMSRRPETRLVSGDDLEDDFMV 240

Query: 241 DEDHLQMKDAKVEKKKGPK----------------------------------------- 300
           +ED+LQ+KDAK+  KKGPK                                         
Sbjct: 241 EEDNLQIKDAKLGNKKGPKVVKFMDCMKGGIEKCGEHNIRHSKQFSTLVLSLKLLLFSSL 300

Query: 301 ----------------------------------------------ANAASGMAVSDDCK 360
                                                         ANAASGM V D+CK
Sbjct: 301 ISSHLISPPKIRISPSPSSSLTFLFSSLFLSLFSSIPLSHTFIHNMANAASGMVVRDECK 360

Query: 361 LKFLELKTKRNYRFIVFKIENQEVVVDKLGSPQKTYDDFLAAIPSDECRYAVFDFDFTTN 392
           LKFLELKTKRNYRFI+FKIENQEVVV+KLGSP +TYDDF AAIP +ECRYAVFDFDFTT+
Sbjct: 361 LKFLELKTKRNYRFIIFKIENQEVVVEKLGSPTETYDDFTAAIPPNECRYAVFDFDFTTD 420

[Close]

BLAST of Carg15135 vs. TAIR 10
Match: AT5G52380.1 (VASCULAR-RELATED NAC-DOMAIN 6 )

HSP 1 Score: 320.9 bits (821), Expect = 1.5e-87
Identity = 158/266 (59.40%), Postives = 194/266 (72.93%), Query Frame = 0


Query: 1   MVSQRQRLARKKYREEHPELFPEVEPTPPKDPDKKKKKSKFKRKKAESNSTRDPNKPHKK 60
           MV+QR+RLA+K+Y+E +PELFP+ EPTPPKDP+KKKKK    +KK   +ST   ++P + 
Sbjct: 1   MVNQRRRLAQKRYKEANPELFPKAEPTPPKDPNKKKKKKSLFKKKKPGSST---DRPQRT 60

Query: 61  GFK-KHPLRVPGMKPGESCFICKAKDHIAKLCPEKAQWEKNKICLLCRRRGHSLKNCPDK 120
           G   +HPLRVPGMKPGE CFIC +K HIAKLCPEK++WE+NKICL CRRRGHSLKNCP+K
Sbjct: 61  GSSTRHPLRVPGMKPGEGCFICHSKTHIAKLCPEKSEWERNKICLQCRRRGHSLKNCPEK 120

Query: 121 NERTVDKKLCYNCGETGHSLANCPQPLQDGGTKFASCFICNESGHLSKNCPKNTHGIYPK 180
           N  + +KKLCYNCG+TGHSL++CP P++DGGTKFASCFIC   GH+SKNCP+N HGIYP 
Sbjct: 121 NNESSEKKLCYNCGDTGHSLSHCPYPMEDGGTKFASCFICKGQGHISKNCPENKHGIYPM 180

Query: 181 GGGCKTCGEVTHLAKDCPNKATQFSAGAYDASGYVEMRRRPETRRVSGDDLEDDF----- 240
           GG CK CG V HL KDCP+K  Q SA     S + +   R +  + SGDDLEDDF     
Sbjct: 181 GGCCKVCGSVAHLVKDCPDKFNQESAQPKKTSRF-DATPRGKLTKFSGDDLEDDFTEEPK 240

Query: 241 -----NIDEDHLQMKDAKVEKKKGPK 256
                N  +D  Q      +KK+GPK
Sbjct: 241 SSKKINTSDDSAQNSVEVKKKKQGPK 262

[Close]

BLAST of Carg15135 vs. TAIR 10
Match: AT4G25590.1 (actin depolymerizing factor 7 )

HSP 1 Score: 236.1 bits (601), Expect = 4.7e-62
Identity = 112/135 (82.96%), Postives = 128/135 (94.81%), Query Frame = 0


Query: 256 ANAASGMAVSDDCKLKFLELKTKRNYRFIVFKIENQEVVVDKLGSPQKTYDDFLAAIPSD 315
           ANAASGMAV D+CKLKFLELK+KRNYRFI+F+I+ Q+VVV+KLG+P +TYDDF A++P++
Sbjct: 2   ANAASGMAVEDECKLKFLELKSKRNYRFIIFRIDGQQVVVEKLGNPDETYDDFTASLPAN 61

Query: 316 ECRYAVFDFDFTTNENCQKSKIFFIAWSPDTSIVRNKMVYASSKDRFKRELDGIQVELQA 375
           ECRYAVFDFDF T+ENCQKSKIFFIAWSPD+S VR KMVYASSKDRFKRELDGIQVELQA
Sbjct: 62  ECRYAVFDFDFITDENCQKSKIFFIAWSPDSSRVRMKMVYASSKDRFKRELDGIQVELQA 121

Query: 376 TDPSEMSFDIIKARA 391
           TDPSEMSFDIIK+RA
Sbjct: 122 TDPSEMSFDIIKSRA 136

[Close]

BLAST of Carg15135 vs. TAIR 10
Match: AT5G52360.1 (actin depolymerizing factor 10 )

HSP 1 Score: 226.5 bits (576), Expect = 3.8e-59
Identity = 110/135 (81.48%), Postives = 122/135 (90.37%), Query Frame = 0


Query: 256 ANAASGMAVSDDCKLKFLELKTKRNYRFIVFKIENQEVVVDKLGSPQKTYDDFLAAIPSD 315
           ANAASGMAV D+CKLKFLELK KRNYRFI+F+I+ Q+VVV+KLGSPQ+ YDDF   +P +
Sbjct: 2   ANAASGMAVEDECKLKFLELKAKRNYRFIIFRIDGQQVVVEKLGSPQENYDDFTNYLPPN 61

Query: 316 ECRYAVFDFDFTTNENCQKSKIFFIAWSPDTSIVRNKMVYASSKDRFKRELDGIQVELQA 375
           ECRYAV+DFDFTT EN QKSKIFFIAWSPD+S VR KMVYASSKDRFKRELDGIQVELQA
Sbjct: 62  ECRYAVYDFDFTTAENIQKSKIFFIAWSPDSSRVRMKMVYASSKDRFKRELDGIQVELQA 121

Query: 376 TDPSEMSFDIIKARA 391
           TDPSEMS DIIK+RA
Sbjct: 122 TDPSEMSLDIIKSRA 136

[Close]

BLAST of Carg15135 vs. TAIR 10
Match: AT1G01750.1 (actin depolymerizing factor 11 )

HSP 1 Score: 226.1 bits (575), Expect = 4.9e-59
Identity = 109/136 (80.15%), Postives = 124/136 (91.18%), Query Frame = 0


Query: 256 ANAASGMAVSDDCKLKFLELKTKRNYRFIVFKIEN--QEVVVDKLGSPQKTYDDFLAAIP 315
           AN+ASGM VSD+CKLKFLELK KRNYRFIVFKI+   Q+V++DKLG+P++TY+DF  +IP
Sbjct: 2   ANSASGMHVSDECKLKFLELKAKRNYRFIVFKIDEKAQQVMIDKLGNPEETYEDFTRSIP 61

Query: 316 SDECRYAVFDFDFTTNENCQKSKIFFIAWSPDTSIVRNKMVYASSKDRFKRELDGIQVEL 375
            DECRYAV+D+DFTT ENCQKSKIFFIAWSPDTS VR+KM+YASSKDRFKRELDGIQVEL
Sbjct: 62  EDECRYAVYDYDFTTPENCQKSKIFFIAWSPDTSRVRSKMLYASSKDRFKRELDGIQVEL 121

Query: 376 QATDPSEMSFDIIKAR 390
           QATDPSEMS DIIK R
Sbjct: 122 QATDPSEMSLDIIKGR 137

[Close]

BLAST of Carg15135 vs. TAIR 10
Match: AT4G00680.1 (actin depolymerizing factor 8 )

HSP 1 Score: 219.9 bits (559), Expect = 3.5e-57
Identity = 104/136 (76.47%), Postives = 123/136 (90.44%), Query Frame = 0


Query: 256 ANAASGMAVSDDCKLKFLELKTKRNYRFIVFKIEN--QEVVVDKLGSPQKTYDDFLAAIP 315
           AN+ASGM V+D+CK+KFLELK KR YRFIVFKI+   Q+V ++KLG+P++TYDDF ++IP
Sbjct: 2   ANSASGMHVNDECKIKFLELKAKRTYRFIVFKIDEKAQQVQIEKLGNPEETYDDFTSSIP 61

Query: 316 SDECRYAVFDFDFTTNENCQKSKIFFIAWSPDTSIVRNKMVYASSKDRFKRELDGIQVEL 375
            DECRYAV+DFDFTT +NCQKSKIFFIAWSPDTS VR+KM+YASSKDRFKRE++GIQVEL
Sbjct: 62  DDECRYAVYDFDFTTEDNCQKSKIFFIAWSPDTSRVRSKMLYASSKDRFKREMEGIQVEL 121

Query: 376 QATDPSEMSFDIIKAR 390
           QATDPSEMS DIIK R
Sbjct: 122 QATDPSEMSLDIIKGR 137

The following BLAST results are available for this feature:

BLAST of Carg15135 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7014772.1	1.2e-229	100.00	Actin-depolymerizing factor 7, partial [Cucurbita argyrosperma subsp. argyrosper...	[more]
XP_023552826.1	2.7e-216	87.84	uncharacterized protein LOC111810346 [Cucurbita pepo subsp. pepo]	[more]
XP_022985102.1	6.4e-210	81.82	uncharacterized protein LOC111483178 [Cucurbita maxima]	[more]
KAA0033654.1	4.1e-201	85.47	zinc finger CCHC domain-containing protein 9 [Cucumis melo var. makuwa]	[more]
XP_038886312.1	2.5e-198	78.88	uncharacterized protein LOC120076526 [Benincasa hispida]	[more]

BLAST of Carg15135 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q67ZM4	6.7e-61	82.96	Actin-depolymerizing factor 7 OS=Arabidopsis thaliana OX=3702 GN=ADF7 PE=2 SV=1	[more]
Q8LFH6	5.3e-58	81.48	Actin-depolymerizing factor 12 OS=Arabidopsis thaliana OX=3702 GN=ADF12 PE=2 SV=...	[more]
Q9LQ81	6.9e-58	80.15	Actin-depolymerizing factor 10 OS=Arabidopsis thaliana OX=3702 GN=ADF10 PE=2 SV=...	[more]
P30175	1.3e-56	76.81	Actin-depolymerizing factor OS=Lilium longiflorum OX=4690 PE=2 SV=1	[more]
Q6EUH7	1.7e-56	77.37	Actin-depolymerizing factor 1 OS=Oryza sativa subsp. japonica OX=39947 GN=ADF1 P...	[more]

BLAST of Carg15135 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1J3Y1	3.1e-210	81.82	uncharacterized protein LOC111483178 OS=Cucurbita maxima OX=3661 GN=LOC111483178...	[more]
A0A5A7SR44	2.0e-201	85.47	Zinc finger CCHC domain-containing protein 9 OS=Cucumis melo var. makuwa OX=1194...	[more]
A0A6J1E8U1	3.7e-195	88.24	ATP-dependent RNA helicase glh-2-like isoform X2 OS=Cucurbita moschata OX=3662 G...	[more]
A0A1S3AY90	1.1e-194	87.76	LOW QUALITY PROTEIN: uncharacterized protein LOC103484078 OS=Cucumis melo OX=365...	[more]
A0A6J1HYC2	1.8e-189	71.37	uncharacterized protein LOC111467373 OS=Cucurbita maxima OX=3661 GN=LOC111467373...	[more]

BLAST of Carg15135 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G52380.1	1.5e-87	59.40	VASCULAR-RELATED NAC-DOMAIN 6	[more]
AT4G25590.1	4.7e-62	82.96	actin depolymerizing factor 7	[more]
AT5G52360.1	3.8e-59	81.48	actin depolymerizing factor 10	[more]
AT1G01750.1	4.9e-59	80.15	actin depolymerizing factor 11	[more]
AT4G00680.1	3.5e-57	76.47	actin depolymerizing factor 8	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001878	Zinc finger, CCHC-type	SMART	SM00343	c2hcfinal6	coord: 182..198 e-value: 0.0062 score: 24.8 coord: 128..144 e-value: 2.1E-4 score: 30.6 coord: 77..93 e-value: 0.032 score: 20.4 coord: 102..118 e-value: 0.33 score: 14.2 coord: 155..171 e-value: 9.1E-4 score: 28.5
IPR001878	Zinc finger, CCHC-type	PFAM	PF00098	zf-CCHC	coord: 182..198 e-value: 0.0022 score: 18.0 coord: 128..144 e-value: 7.1E-6 score: 25.9 coord: 156..171 e-value: 5.8E-5 score: 23.0
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 183..198 score: 9.00989
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 129..144 score: 10.262582
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 156..171 score: 9.883478
IPR002108	Actin-depolymerising factor homology domain	SMART	SM00102	adf_2	coord: 266..391 e-value: 1.7E-54 score: 197.1
IPR002108	Actin-depolymerising factor homology domain	PFAM	PF00241	Cofilin_ADF	coord: 268..388 e-value: 2.6E-35 score: 120.9
IPR002108	Actin-depolymerising factor homology domain	PROSITE	PS51263	ADF_H	coord: 261..391 score: 36.925499
None	No IPR available	GENE3D	4.10.60.10		coord: 124..149 e-value: 9.9E-6 score: 27.1
None	No IPR available	GENE3D	4.10.60.10		coord: 73..123 e-value: 3.8E-9 score: 38.3
None	No IPR available	GENE3D	4.10.60.10		coord: 150..201 e-value: 4.7E-12 score: 47.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..67
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 8..34
None	No IPR available	PANTHER	PTHR47798	OS04G0555800 PROTEIN	coord: 1..255
None	No IPR available	SUPERFAMILY	55753	Actin depolymerizing proteins	coord: 254..389
IPR025836	Zinc knuckle CX2CX4HX4C	PFAM	PF14392	zf-CCHC_4	coord: 101..117 e-value: 0.026 score: 14.2
IPR029006	ADF-H/Gelsolin-like domain superfamily	GENE3D	3.40.20.10	Severin	coord: 251..390 e-value: 8.7E-51 score: 173.9
IPR017904	ADF/Cofilin	CDD	cd11286	ADF_cofilin_like	coord: 260..390 e-value: 9.69282E-63 score: 195.853
IPR036875	Zinc finger, CCHC-type superfamily	SUPERFAMILY	57756	Retrovirus zinc finger-like domains	coord: 71..119
IPR036875	Zinc finger, CCHC-type superfamily	SUPERFAMILY	57756	Retrovirus zinc finger-like domains	coord: 122..173

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg15135-RA	Carg15135-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030042	actin filament depolymerization
cellular_component	GO:0015629	actin cytoskeleton
molecular_function	GO:0003779	actin binding
molecular_function	GO:0004386	helicase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding